Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0015112

Physical Location & Seq

Genomic Coordinates Forward (+)

20915337 .. 20921725

Gene Structure 6389 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3003 bp

ATGGAAACGGAAGCGGCATCCCTGAAGAGGAAGTCGGAGGGAGAGGCCGAGTTGGAAGAAGCTCCACAGAAACAACAAAAGAGGGACAACGGTTGGGCAAGCGTCGACGACGAAGCGGTGGCCTGCTTGCACGACGTGTCGTATCCTGAGGGCTATGTCGTTCCTCCCCCTTCTTCTTCTTCTTCAGCTGCAGCAGAAGCTTCTGAACCTGCCAAGAAATTCCCCTTCCCTCTGGACCCTTTTCAGTCTGAGGCCATAAACTGCCTCGAAAAAGCCGAGTCCGTCATGGTGTCTGCTCATACGTCGGCTGGGAAAACTGTGGTGGCATCGTATGCGATTGCAATGTCTCTAAGAAACAAGCAGAGAGTGATATACACTTCACCAATCAAAGCACTGAGCAACCAAAAGTATAGAGAGTTCAAAGAGGAGTTTTCCGACGTTGGCTTGATGACGGGCGATGTAACTATCGACCCCAATGCTTCCTGCTTGGTTATGACAACAGAAATCTGGCGTAGCATGCAGTACAAAGGGTCAGAGATAACGCGTGAGGTGGCGTGGATTATCTTCGATGAGGTGCACTATATGCGTGATAGGGAGAGAGGTGTGGTGTGGGAAGAGAGCATTGTTATGGCTCCAAAGAATGCTCGGTTTGTGTTCCTCTCAGCAACTGTGCCAAATGCTAAGGAATTTGCTGATTGGCTTGCAAAGATTCACCGTCAGCCTTGTCACATTGTCTATACTGATTATAGGCCAACTCCTCTGCAGCATTATATTTTTCCTTCTGGAGGGAATGGATTGTACTTGGTAGTAGATGAAAAAGGGAAATTTCGCGAAGACAGCTTTCAGAAAGCTCTTAATGCTCTTGCTCCCACTGCCGATAGTGCTAAGAAGAAGGAAAATGGCAAGTGGCAAAAGGGTTTGATCATGGGCAAGGCTGCTGAGGAAAGTGATATCTTCAAGATGGTCAAAATGATAATTCAGCGTCAGTATGATCCTGTAATACTTTTTAGCTTTAGCAAAAGGGAGTGCGAATCTCTTGCAATGCAGATGGCAAAAATGGATCTAAATGGGGACAATGAGAAAGAAAATGTAGAAACCATCTTCTGGAGTGCTATGGATATGCTTTCTGATGATGATAAAAAGTTACCTCAGGTTTCACATATGCTACCCCTTTTGAAGCGTGGAATTGGTGTGCATCATTCTGGATTGCTTCCAATTCTAAAGGAAGTGATTGAGATATTATTTCAGGAAGGCCTAATCAAGTGTTTGTTTGCCACAGAGACCTTCAGCATAGGATTGAACATGCCTGCAAAAACTGTTGTGTTTACCAATGTCCGGAAATTTGATGGTGATAAGTTCAGATGGCTATCCAGTGGAGAGTATATACAAATGAGTGGCCGTGCTGGTCGCCGTGGTATTGATAAGCGTGGAATATGTATACTTATGGTAGATGAGAAGCTGGAACCATCTACTGCTAAAATGATGCTTAAAGGAAGTGCTGATTGTTTGAACAGTGCTTTTCATTTGAGCTACAACATGCTTCTGAATCAATTACGCAGCGAAGATGGTAATCCAGAAAATTTGCTTCGTAACTCGTTCTATCAATTTCAAGCTGATCGTGCCATCCCCAGTCTTGAGAAGCAAGCAAAGGATCTTGAGAAAGAGAGGGATTCAATTATAATTGAAGAAGAAGATAGTGTAAAGAATTATTACAATCTGTTACAGCAATACAAGAGTTTGAAACAGGAACTTCGTGATATTGTGCTTTCTCCAAAGTACTGCTTACCATTTCTGAAACCTGGTAGGCTTGTCTCAATCCAATGTGCTAAAAGTGATGAAGGTTCCCCTTCTTTTTCCATTGAGGACCTGGTCACATGGGGAGTGATACTAAATTTTCAACGGGTGAAAACTGCTTCAGAAGATGATGCAAGTAGAAAACCCGAAGATTCAAACTACACAGTGGATGTTCTGACAAGGTGCAGGGTAAGTACAGATGAAGCTGCTAAGAAAACCATCAAAATTATCCCTCTCAAAGAGGCAGGAGAACCTGCTGTTGTCTCCATTTCCATATCTCAGATAAATAGTATGAGTGGACTTTGTATGGTCATTCCTAAGGATCTTTTGCCACTACCAGCTCGAGAAAACACACTGAAGAGAGTTCTTGAAACTCTGTCAAGATTTGATAAAGGAAAGATTCCTCTTCTCGATCCAGAAGAAGATATGAAGATTGAAAGTAGTTCATACAAAAAGGTGTCTCGTAGGATCGAGGCGTTAGAGAACCTGTTTGACAGGCATGAAGTTGCTAGAACTCCACTTATTGAGCAAAAGCTTAAGGTTTTTCATATGAAGCAGGATTTGGCTGCCAAGATCAAGTCAATCAAGAAAACAATGCGCTCGTCCACTGCATTAGCTTTTAAAGATGAACTGAAGGCAAGAAAACGGGTCCTTCGGAGGCTAGGATATGTTACAAATGATGGTGTTGTGGAGTTGAAGGGTAAAGTTGCTTGTGAAATCAGTAGTGCAGAAGAGTTGACCCTGACTGAGCTCATGTTCAATGGGGCTTTCAAGGACATAAACGTGGAAGAGATGGTTTCTCTTCTCTCATGTTTTGTGTGGCAGGAGAAGCTTAAGGAAGCTACAAAACCAAGGGAAGAGCTTGACCTGCTATTTTCACAATTACAAGATACAGCTCGGAGGGTTGCTGAGGTTCAGCTCGAGTGCAAGGTCGAAATTGATGTTGACAGCTTTGTGAGTTCTTTTCGGCCTGATATTATGGAGGCTGTGTATGCTTGGGCAAAAGGGTCCAAATTCTACGAGATCATGTCAGCTACACCTGTTTTTGAGGGCAGCTTGATCAGGGCAATTAGGAGATTAGAGGAAGTCCTTCAGCAACTTATTCAAGCAGCCAAGTCTATTGGAGAAACCGAGCTTGAGTCAAAATTTGAGGAGGCCGTTTTGAAGATCAAAAGGGACATTGTCTTTGCGGCTTCCCTATACTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000460 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019439 GO:0022613 GO:0031123 GO:0031125 GO:0031974 GO:0031981 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0042254 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043628 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

DEAD DSHCT Helicase_C rRNA_proc-arch

Protein Analysis

1001

Amino Acids

113.16

Weight (kDa)

6.06

Isoelectric Point (pI)

50.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ResIII	PF04851	78 - 224	2.1e-08	Type III restriction enzyme, res subunit
DEAD	PF00270	80 - 229	1.5e-26	DEAD/DEAH box helicase
DEXQc_Suv3	PF22527	100 - 211	4.7e-08	DEXQ-box helicase domain of Suv3
Helicase_C	PF00271	393 - 472	4.2e-06	Helicase conserved C-terminal domain
MTR4-like_stalk	PF21408	526 - 589	3.4e-20	Exosome RNA helicase MTR4-like, stalk
MTR4_beta-barrel	PF13234	590 - 798	2.8e-48	Mtr4-like, beta-barrel domain
DSHCT	PF08148	825 - 995	1.7e-55	DSHCT (NUC185) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59760
fragaria_vesca	FvH4_5g28050 FvH4_5g28050 FvH4_5g28050
malus_domestica	MD08G1247600.v1.1
prunus_persica	Prupe.6G113400_v2.0.a1
pyrus_communis	pycom08g21450
rosa_chinensis	RchiOBHm_Chr7g0220221
rosa_laevigata	RLG00000002249
rosa_multiflora	Rmu_sc0001136.1_g000019
rosa_roxburghii	Rroxscaffold_3G00239700
rosa_rugosa	Rorug07G0191200
rosa_samantha	Rh7AG333300 Rh7CG350900 Rh7DG329600
rosa_wichuraiana	Rw7G028110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1679
Acc36I	ACCTGC	3 cut(s)	217, 2056, 2670
AccB7I	CCANNNNNTGG	1 cut(s)	1104
AccI	GTMKAC	2 cut(s)	105, 1438
AccII	CGCG	2 cut(s)	544, 831
AccIII	TCCGGA	1 cut(s)	1335
AciI	CCGC	3 cut(s)	14, 116, 2984
AclWI	GGATC	6 cut(s)	986, 1068, 1659, 2124, 2201, 2270
AcoI	YGGCCR	1 cut(s)	1396
AcsI	RAATTY	8 cut(s)	218, 686, 824, 1340, 1579, 1891, 2807, 2939
AcuI	CTGAAG	7 cut(s)	44, 168, 1270, 1899, 2171, 2447, 2870
AdeI	CACNNNGTG	1 cut(s)	136
AfaI	GTAC	4 cut(s)	524, 800, 1778, 1990
AfiI	CCNNNNNNNGG	4 cut(s)	27, 785, 1104, 1335
AflII	CTTAAG	2 cut(s)	2330, 2627
AflIII	ACRYGT	2 cut(s)	135, 542
AjiI	CACGTC	1 cut(s)	136
AjnI	CCWGG	2 cut(s)	1798, 1866
AjuI	GAANNNNNNNTTGG	2 cut(s)	2339, 2371
Alw21I	GWGCWC	2 cut(s)	579, 2547
Alw26I	GTCTC	5 cut(s)	351, 1274, 1816, 2062, 2259
Alw44I	GTGCAC	1 cut(s)	575
AlwI	GGATC	6 cut(s)	986, 1068, 1659, 2124, 2201, 2270
AlwNI	CAGNNNCTG	1 cut(s)	668
Ama87I	CYCGRG	2 cut(s)	2136, 2714
Aor13HI	TCCGGA	1 cut(s)	1335
AoxI	GGCC	8 cut(s)	45, 120, 252, 749, 1252, 1396, 2762, 2949
ApaLI	GTGCAC	1 cut(s)	575
ApeKI	GCWGC	9 cut(s)	188, 191, 763, 935, 1557, 2000, 2360, 2847, 2903
ApoI	RAATTY	8 cut(s)	218, 686, 824, 1340, 1579, 1891, 2807, 2939
ArsI	GACNNNNNNTTYG	2 cut(s)	2963, 2995
Asp700I	GAANNNNTTC	1 cut(s)	2883
AspLEI	GCGC	1 cut(s)	2394
AspS9I	GGNCC	4 cut(s)	235, 1864, 2443, 2802
AsuHPI	GGTGA	4 cut(s)	372, 704, 1361, 1915
AvaI	CYCGRG	2 cut(s)	2136, 2714
AvaII	GGWCC	4 cut(s)	235, 1864, 2443, 2802
AxyI	CCTNAGG	3 cut(s)	147, 1149, 2112
BaeGI	GKGCMC	1 cut(s)	579
BanII	GRGCYC	1 cut(s)	2547
BbsI	GAAGAC	1 cut(s)	840
Bbv12I	GWGCWC	2 cut(s)	579, 2547
BbvCI	CCTCAGC	2 cut(s)	939, 2703
BbvI	GCAGC	9 cut(s)	175, 203, 775, 922, 1569, 1987, 2347, 2859, 2915
BceAI	ACGGC	3 cut(s)	1383, 1395, 2936
BcgI	CGANNNNNNTGC	4 cut(s)	458, 492, 1019, 1053
BciT130I	CCWGG	2 cut(s)	1800, 1868
BciVI	GTATCC	1 cut(s)	153
BclI	TGATCA	2 cut(s)	921, 2853
BcoDI	GTCTC	5 cut(s)	351, 1274, 1816, 2062, 2259
BfaI	CTAG	2 cut(s)	2304, 2456
BfmI	CTRYAG	2 cut(s)	189, 761
BfrI	CTTAAG	2 cut(s)	2330, 2627
BfuAI	ACCTGC	3 cut(s)	217, 2056, 2670
BfuI	GTATCC	1 cut(s)	153
BmcAI	AGTACT	1 cut(s)	1778
Bme1390I	CCNGG	2 cut(s)	1800, 1868
Bme18I	GGWCC	4 cut(s)	235, 1864, 2443, 2802
BmeT110I	CYCGRG	2 cut(s)	2136, 2714
BmgBI	CACGTC	1 cut(s)	136
BmgT120I	GGNCC	4 cut(s)	235, 1864, 2443, 2802
BmiI	GGNNCC	6 cut(s)	237, 633, 1464, 1843, 2444, 2803
BmrFI	CCNGG	2 cut(s)	1800, 1868
BmrI	ACTGGG	1 cut(s)	1623
BmsI	GCATC	5 cut(s)	26, 335, 1204, 1473, 1915
BmuI	ACTGGG	1 cut(s)	1623
BpiI	GAAGAC	1 cut(s)	840
BpmI	CTGGAG	2 cut(s)	804, 1126
Bpu10I	CCTNAGC	3 cut(s)	681, 939, 2703
BpuEI	CTTGAG	3 cut(s)	1655, 1676, 2951
BsaBI	GATNNNNATC	2 cut(s)	1366, 1569
BsaI	GGTCTC	1 cut(s)	1274
BsaJI	CCNNGG	2 cut(s)	1411, 2645
BsaWI	WCCGGW	1 cut(s)	1335
BsaXI	ACNNNNNCTCC	2 cut(s)	2768, 2798
Bsc4I	CCNNNNNNNGG	4 cut(s)	27, 785, 1104, 1335
Bse1I	ACTGG	2 cut(s)	1371, 1629
Bse21I	CCTNAGG	3 cut(s)	147, 1149, 2112
Bse3DI	GCAATG	2 cut(s)	348, 1047
Bse8I	GATNNNNATC	2 cut(s)	1366, 1569
BseAI	TCCGGA	1 cut(s)	1335
BseBI	CCWGG	2 cut(s)	1800, 1868
BseDI	CCNNGG	2 cut(s)	1411, 2645
BseGI	GGATG	3 cut(s)	17, 1623, 1969
BseJI	GATNNNNATC	2 cut(s)	1366, 1569
BseLI	CCNNNNNNNGG	4 cut(s)	27, 785, 1104, 1335
BseMI	GCAATG	2 cut(s)	348, 1047
BseMII	CTCAG	9 cut(s)	138, 240, 386, 675, 930, 1163, 2087, 2532, 2694
BseNI	ACTGG	2 cut(s)	1371, 1629
BseRI	GAGGAG	3 cut(s)	440, 747, 2960
BseSI	GKGCMC	1 cut(s)	579
BseXI	GCAGC	9 cut(s)	175, 203, 775, 922, 1569, 1987, 2347, 2859, 2915
BseYI	CCCAGC	1 cut(s)	308
BsgI	GTGCAG	2 cut(s)	1999, 2541
Bsh1236I	CGCG	2 cut(s)	544, 831
BshFI	GGCC	8 cut(s)	47, 122, 254, 751, 1254, 1398, 2764, 2951
BsiHKAI	GWGCWC	2 cut(s)	579, 2547
BsiHKCI	CYCGRG	2 cut(s)	2136, 2714
BsiSI	CCGG	1 cut(s)	1336
BslFI	GGGAC	3 cut(s)	98, 1085, 2984
BslI	CCNNNNNNNGG	4 cut(s)	27, 785, 1104, 1335
BsmAI	GTCTC	5 cut(s)	351, 1274, 1816, 2062, 2259
BsmFI	GGGAC	3 cut(s)	98, 1085, 2984
BsmI	GAATGC	1 cut(s)	646
BsnI	GGCC	8 cut(s)	47, 122, 254, 751, 1254, 1398, 2764, 2951
Bso31I	GGTCTC	1 cut(s)	1274
BsoBI	CYCGRG	2 cut(s)	2136, 2714
Bsp1286I	GDGCHC	2 cut(s)	579, 2547
Bsp13I	TCCGGA	1 cut(s)	1335
Bsp68I	TCGCGA	1 cut(s)	831
BspACI	CCGC	3 cut(s)	14, 116, 2984
BspANI	GGCC	8 cut(s)	47, 122, 254, 751, 1254, 1398, 2764, 2951
BspCNI	CTCAG	9 cut(s)	139, 241, 387, 674, 931, 1162, 2086, 2533, 2695
BspEI	TCCGGA	1 cut(s)	1335
BspFNI	CGCG	2 cut(s)	544, 831
BspLI	GGNNCC	6 cut(s)	237, 633, 1464, 1843, 2444, 2803
BspMAI	CTGCAG	2 cut(s)	193, 765
BspMI	ACCTGC	3 cut(s)	217, 2056, 2670
BspPI	GGATC	6 cut(s)	986, 1068, 1659, 2124, 2201, 2270
BspQI	GCTCTTC	1 cut(s)	2646
BspTI	CTTAAG	2 cut(s)	2330, 2627
BspTNI	GGTCTC	1 cut(s)	1274
BsrDI	GCAATG	2 cut(s)	348, 1047
BsrI	ACTGG	2 cut(s)	1371, 1629
BssECI	CCNNGG	2 cut(s)	1411, 2645
BssNAI	GTATAC	1 cut(s)	1439
BssT1I	CCWWGG	1 cut(s)	2645
Bst1107I	GTATAC	1 cut(s)	1439
Bst2UI	CCWGG	2 cut(s)	1800, 1868
Bst4CI	ACNGT	7 cut(s)	92, 319, 670, 716, 1318, 1514, 1960
Bst6I	CTCTTC	8 cut(s)	20, 609, 2147, 2205, 2520, 2577, 2601, 2646
BstAFI	CTTAAG	2 cut(s)	2330, 2627
BstAPI	GCANNNNNTGC	2 cut(s)	332, 583
BstC8I	GCNNGC	7 cut(s)	100, 124, 128, 518, 702, 1308, 1644
BstDSI	CCRYGG	1 cut(s)	1411
BstENI	CCTNNNNNAGG	1 cut(s)	783
BstF5I	GGATG	3 cut(s)	17, 1623, 1969
BstFNI	CGCG	2 cut(s)	544, 831
BstHHI	GCGC	1 cut(s)	2394
BstMAI	GTCTC	5 cut(s)	351, 1274, 1816, 2062, 2259
BstNI	CCWGG	2 cut(s)	1800, 1868
BstNSI	RCATGY	3 cut(s)	520, 1306, 1540
BstSCI	CCNGG	2 cut(s)	1798, 1866
BstSFI	CTRYAG	2 cut(s)	189, 761
BstSLI	GKGCMC	1 cut(s)	579
BstUI	CGCG	2 cut(s)	544, 831
BstV1I	GCAGC	9 cut(s)	175, 203, 775, 922, 1569, 1987, 2347, 2859, 2915
BstV2I	GAAGAC	1 cut(s)	840
BstX2I	RGATCY	3 cut(s)	1060, 1651, 2116
BstYI	RGATCY	3 cut(s)	1060, 1651, 2116
BstZ17I	GTATAC	1 cut(s)	1439
Bsu36I	CCTNAGG	3 cut(s)	147, 1149, 2112
BsuI	GTATCC	1 cut(s)	153
BsuRI	GGCC	8 cut(s)	47, 122, 254, 751, 1254, 1398, 2764, 2951
BtgI	CCRYGG	1 cut(s)	1411
BtgZI	GCGATG	1 cut(s)	471
BtrI	CACGTC	1 cut(s)	136
BtsCI	GGATG	3 cut(s)	17, 1623, 1969
BtsI	GCAGTG	2 cut(s)	870, 2400
BtsIMutI	CAGTG	7 cut(s)	392, 870, 1378, 1519, 1965, 2147, 2400
BtuMI	TCGCGA	1 cut(s)	831
BveI	ACCTGC	3 cut(s)	217, 2056, 2670
Cac8I	GCNNGC	7 cut(s)	100, 124, 128, 518, 702, 1308, 1644
CaiI	CAGNNNCTG	1 cut(s)	668
CfoI	GCGC	1 cut(s)	2394
Cfr13I	GGNCC	4 cut(s)	235, 1864, 2443, 2802
CseI	GACGC	2 cut(s)	91, 971
CsiI	ACCWGGT	2 cut(s)	1798, 1866
Csp6I	GTAC	4 cut(s)	523, 799, 1777, 1989
CviQI	GTAC	4 cut(s)	523, 799, 1777, 1989
DraI	TTTAAA	1 cut(s)	2416
DraIII	CACNNNGTG	1 cut(s)	136
EaeI	YGGCCR	1 cut(s)	1396
Eam1104I	CTCTTC	8 cut(s)	20, 609, 2147, 2205, 2520, 2577, 2601, 2646
EarI	CTCTTC	8 cut(s)	20, 609, 2147, 2205, 2520, 2577, 2601, 2646
Ecl136II	GAGCTC	1 cut(s)	2545
Eco130I	CCWWGG	1 cut(s)	2645
Eco147I	AGGCCT	1 cut(s)	1254
Eco24I	GRGCYC	1 cut(s)	2547
Eco31I	GGTCTC	1 cut(s)	1274
Eco32I	GATATC	1 cut(s)	952
Eco47I	GGWCC	4 cut(s)	235, 1864, 2443, 2802
Eco53kI	GAGCTC	1 cut(s)	2545
Eco57I	CTGAAG	7 cut(s)	44, 168, 1270, 1899, 2171, 2447, 2870
Eco81I	CCTNAGG	3 cut(s)	147, 1149, 2112
Eco88I	CYCGRG	2 cut(s)	2136, 2714
EcoICRI	GAGCTC	1 cut(s)	2545
EcoNI	CCTNNNNNAGG	1 cut(s)	783
EcoO109I	RGGNCCY	2 cut(s)	1864, 2443
EcoRII	CCWGG	2 cut(s)	1798, 1866
EcoRV	GATATC	1 cut(s)	952
EcoT14I	CCWWGG	1 cut(s)	2645
EcoT38I	GRGCYC	1 cut(s)	2547
ErhI	CCWWGG	1 cut(s)	2645
FalI	AAGNNNNNCTT	2 cut(s)	1766, 1798
FaqI	GGGAC	3 cut(s)	98, 1085, 2984
FauNDI	CATATG	2 cut(s)	1161, 2343
FbaI	TGATCA	2 cut(s)	921, 2853
FblI	GTMKAC	2 cut(s)	105, 1438
FokI	GGATG	3 cut(s)	4, 1610, 1976
FriOI	GRGCYC	1 cut(s)	2547
FspBI	CTAG	2 cut(s)	2304, 2456
GlaI	GCGC	1 cut(s)	2393
GsaI	CCCAGC	1 cut(s)	312
GsuI	CTGGAG	2 cut(s)	804, 1126
HaeIII	GGCC	8 cut(s)	47, 122, 254, 751, 1254, 1398, 2764, 2951
HapII	CCGG	1 cut(s)	1336
HgaI	GACGC	2 cut(s)	91, 971
HhaI	GCGC	1 cut(s)	2394
Hin6I	GCGC	1 cut(s)	2392
HinP1I	GCGC	1 cut(s)	2392
HincII	GTYRAC	3 cut(s)	106, 2532, 2740
HindII	GTYRAC	3 cut(s)	106, 2532, 2740
HindIII	AAGCTT	3 cut(s)	198, 2327, 2624
HinfI	GANTC	8 cut(s)	278, 709, 1031, 1546, 1670, 1946, 2194, 2933
HpaII	CCGG	1 cut(s)	1336
HphI	GGTGA	4 cut(s)	372, 704, 1361, 1915
Hpy166II	GTNNAC	8 cut(s)	106, 577, 1326, 1439, 2093, 2400, 2532, 2740
Hpy8I	GTNNAC	8 cut(s)	106, 577, 1326, 1439, 2093, 2400, 2532, 2740
Hpy99I	CGWCG	6 cut(s)	107, 110, 113, 137, 307, 440
HpyCH4III	ACNGT	7 cut(s)	92, 319, 670, 716, 1318, 1514, 1960
HpyCH4IV	ACGT	4 cut(s)	135, 302, 438, 2577
HpySE526I	ACGT	4 cut(s)	135, 302, 438, 2577
HspAI	GCGC	1 cut(s)	2392
Kpn2I	TCCGGA	1 cut(s)	1335
Ksp22I	TGATCA	2 cut(s)	921, 2853
LguI	GCTCTTC	1 cut(s)	2646
LmnI	GCTCC	3 cut(s)	67, 637, 871
Lsp1109I	GCAGC	9 cut(s)	175, 203, 775, 922, 1569, 1987, 2347, 2859, 2915
LweI	GCATC	5 cut(s)	26, 335, 1204, 1473, 1915
MabI	ACCWGGT	2 cut(s)	1798, 1866
MaeI	CTAG	2 cut(s)	2304, 2456
MaeII	ACGT	4 cut(s)	135, 302, 438, 2577
MaeIII	GTNAC	7 cut(s)	460, 725, 1143, 1589, 1719, 1870, 2464
MflI	RGATCY	3 cut(s)	1060, 1651, 2116
MhlI	GDGCHC	2 cut(s)	579, 2547
MluI	ACGCGT	1 cut(s)	542
MlyI	GAGTC	2 cut(s)	287, 2942
MmeI	TCCRAC	3 cut(s)	15, 33, 459
MroI	TCCGGA	1 cut(s)	1335
MroXI	GAANNNNTTC	1 cut(s)	2883
MseI	TTAA	5 cut(s)	855, 1488, 2331, 2415, 2628
MslI	CAYNNNNRTG	2 cut(s)	626, 2576
MspA1I	CMGCKG	1 cut(s)	188
MspCI	CTTAAG	2 cut(s)	2330, 2627
MspI	CCGG	1 cut(s)	1336
MspR9I	CCNGG	2 cut(s)	1800, 1868
Mva1269I	GAATGC	1 cut(s)	646
MvaI	CCWGG	2 cut(s)	1800, 1868
MvnI	CGCG	2 cut(s)	544, 831
NdeI	CATATG	2 cut(s)	1161, 2343
NlaIV	GGNNCC	6 cut(s)	237, 633, 1464, 1843, 2444, 2803
NmeAIII	GCCGAG	2 cut(s)	73, 301
NmuCI	GTSAC	2 cut(s)	725, 1870
NruI	TCGCGA	1 cut(s)	831
NspI	RCATGY	3 cut(s)	520, 1306, 1540
PaeI	GCATGC	1 cut(s)	520
PaeR7I	CTCGAG	2 cut(s)	2136, 2714
PceI	AGGCCT	1 cut(s)	1254
PciSI	GCTCTTC	1 cut(s)	2646
PcsI	WCGNNNNNNNCGW	1 cut(s)	273
PctI	GAATGC	1 cut(s)	646
PdmI	GAANNNNTTC	1 cut(s)	2883
PfeI	GAWTC	6 cut(s)	709, 1031, 1546, 1670, 1946, 2194
PflFI	GACNNNGTC	2 cut(s)	1868, 2975
PflMI	CCANNNNNTGG	1 cut(s)	1104
PleI	GAGTC	2 cut(s)	286, 2941
PpsI	GAGTC	2 cut(s)	286, 2941
PpuMI	RGGWCCY	2 cut(s)	1864, 2443
PsiI	TTATAA	1 cut(s)	1679
Psp124BI	GAGCTC	1 cut(s)	2547
Psp5II	RGGWCCY	2 cut(s)	1864, 2443
Psp6I	CCWGG	2 cut(s)	1798, 1866
PspFI	CCCAGC	1 cut(s)	308
PspGI	CCWGG	2 cut(s)	1798, 1866
PspN4I	GGNNCC	6 cut(s)	237, 633, 1464, 1843, 2444, 2803
PspPI	GGNCC	4 cut(s)	235, 1864, 2443, 2802
PspPPI	RGGWCCY	2 cut(s)	1864, 2443
PspXI	VCTCGAGB	1 cut(s)	2714
PsrI	GAACNNNNNNTAC	2 cut(s)	401, 433
PstI	CTGCAG	2 cut(s)	193, 765
PstNI	CAGNNNCTG	1 cut(s)	668
PsuI	RGATCY	3 cut(s)	1060, 1651, 2116
PsyI	GACNNNGTC	2 cut(s)	1868, 2975
PvuII	CAGCTG	1 cut(s)	188
RruI	TCGCGA	1 cut(s)	831
RsaI	GTAC	4 cut(s)	524, 800, 1778, 1990
RsaNI	GTAC	4 cut(s)	523, 799, 1777, 1989
RseI	CAYNNNNRTG	2 cut(s)	626, 2576
SacI	GAGCTC	1 cut(s)	2547
SalI	GTCGAC	1 cut(s)	104
SapI	GCTCTTC	1 cut(s)	2646
SaqAI	TTAA	5 cut(s)	855, 1488, 2331, 2415, 2628
Sau96I	GGNCC	4 cut(s)	235, 1864, 2443, 2802
ScaI	AGTACT	1 cut(s)	1778
SchI	GAGTC	2 cut(s)	287, 2942
ScrFI	CCNGG	2 cut(s)	1800, 1868
SduI	GDGCHC	2 cut(s)	579, 2547
SexAI	ACCWGGT	2 cut(s)	1798, 1866
SfaNI	GCATC	5 cut(s)	26, 335, 1204, 1473, 1915
SfcI	CTRYAG	2 cut(s)	189, 761
Sfr274I	CTCGAG	2 cut(s)	2136, 2714
SgrDI	CGTCGACG	1 cut(s)	104
SinI	GGWCC	4 cut(s)	235, 1864, 2443, 2802
SlaI	CTCGAG	2 cut(s)	2136, 2714
SmiMI	CAYNNNNRTG	2 cut(s)	626, 2576
SmlI	CTYRAG	7 cut(s)	1634, 1655, 2136, 2330, 2627, 2714, 2930
SmoI	CTYRAG	7 cut(s)	1634, 1655, 2136, 2330, 2627, 2714, 2930
SphI	GCATGC	1 cut(s)	520
SseBI	AGGCCT	1 cut(s)	1254
SsiI	CCGC	3 cut(s)	14, 116, 2984
SspMI	CTAG	2 cut(s)	2304, 2456
SstI	GAGCTC	1 cut(s)	2547
StuI	AGGCCT	1 cut(s)	1254
StyD4I	CCNGG	2 cut(s)	1798, 1866
StyI	CCWWGG	1 cut(s)	2645
TaaI	ACNGT	7 cut(s)	92, 319, 670, 716, 1318, 1514, 1960
TaiI	ACGT	4 cut(s)	138, 305, 441, 2580
TaqI	TCGA	9 cut(s)	105, 267, 468, 567, 2137, 2205, 2265, 2715, 2727
TatI	WGTACW	4 cut(s)	522, 798, 1776, 1988
TauI	GCSGC	2 cut(s)	17, 2987
TfiI	GAWTC	6 cut(s)	709, 1031, 1546, 1670, 1946, 2194
Tru1I	TTAA	5 cut(s)	855, 1488, 2331, 2415, 2628
Tru9I	TTAA	5 cut(s)	855, 1488, 2331, 2415, 2628
TscAI	CASTG	7 cut(s)	399, 877, 1378, 1519, 1965, 2154, 2407
TseFI	GTSAC	2 cut(s)	725, 1870
TseI	GCWGC	9 cut(s)	188, 191, 763, 935, 1557, 2000, 2360, 2847, 2903
Tsp45I	GTSAC	2 cut(s)	725, 1870
TspGWI	ACGGA	2 cut(s)	23, 271
TspRI	CASTG	7 cut(s)	399, 877, 1378, 1519, 1965, 2154, 2407
Tth111I	GACNNNGTC	2 cut(s)	1868, 2975
Van91I	CCANNNNNTGG	1 cut(s)	1104
Vha464I	CTTAAG	2 cut(s)	2330, 2627
VneI	GTGCAC	1 cut(s)	575
VpaK11BI	GGWCC	4 cut(s)	235, 1864, 2443, 2802
XagI	CCTNNNNNAGG	1 cut(s)	783
XapI	RAATTY	8 cut(s)	218, 686, 824, 1340, 1579, 1891, 2807, 2939
XceI	RCATGY	3 cut(s)	520, 1306, 1540
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1864
XhoI	CTCGAG	2 cut(s)	2136, 2714
XmiI	GTMKAC	2 cut(s)	105, 1438
XmnI	GAANNNNTTC	1 cut(s)	2883
XspI	CTAG	2 cut(s)	2304, 2456
ZrmI	AGTACT	1 cut(s)	1778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.