FLX-like 2
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67170 AT1G67170 |
| fragaria_vesca | FvH4_6g45670 FvH4_6g45670 FvH4_6g45670 |
| malus_domestica | MD09G1080900.v1.1 MD17G1072000.v1.1 |
| prunus_persica | Prupe.3G242800_v2.0.a1 |
| pyrus_communis | pycom09g00730 pycom17g07130 |
| rosa_chinensis | RchiOBHm_Chr2g0163821 |
| rosa_laevigata | RLG00000021418 |
| rosa_multiflora | Rmu_sc0001181.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00086990 |
| rosa_rugosa | Rorug02G0504800 |
| rosa_samantha | Rh2AG572700 Rh2BG583400 Rh2CG554300 Rh2DG593000 |
| rosa_wichuraiana | Rw2G047350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 1239 |
| Acc36I | ACCTGC | 3 cut(s) | 958, 982, 1030 |
| AccB1I | GGYRCC | 4 cut(s) | 92, 236, 692, 1228 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 406, 872 |
| AccII | CGCG | 1 cut(s) | 1209 |
| AclWI | GGATC | 5 cut(s) | 465, 977, 1001, 1003, 1091 |
| AcoI | YGGCCR | 3 cut(s) | 41, 80, 231 |
| AcuI | CTGAAG | 2 cut(s) | 446, 581 |
| AcyI | GRCGYC | 1 cut(s) | 93 |
| AflIII | ACRYGT | 2 cut(s) | 157, 1159 |
| AgsI | TTSAA | 4 cut(s) | 417, 590, 767, 785 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 349 |
| AjiI | CACGTC | 1 cut(s) | 794 |
| AjnI | CCWGG | 5 cut(s) | 49, 892, 925, 1042, 1087 |
| AleI | CACNNNNGTG | 1 cut(s) | 598 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 1248 |
| Alw21I | GWGCWC | 1 cut(s) | 880 |
| Alw26I | GTCTC | 1 cut(s) | 1033 |
| AlwI | GGATC | 5 cut(s) | 465, 977, 1001, 1003, 1091 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 145 |
| Ama87I | CYCGRG | 5 cut(s) | 70, 387, 712, 1104, 1239 |
| AoxI | GGCC | 6 cut(s) | 41, 67, 80, 231, 396, 923 |
| ApeKI | GCWGC | 6 cut(s) | 149, 484, 818, 845, 1136, 1139 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 594 |
| AspLEI | GCGC | 2 cut(s) | 95, 836 |
| AspS9I | GGNCC | 9 cut(s) | 53, 68, 397, 887, 923, 947, 971, 1019, 1148 |
| AsuC2I | CCSGG | 6 cut(s) | 71, 72, 713, 714, 1105, 1106 |
| AsuII | TTCGAA | 1 cut(s) | 1267 |
| AvaI | CYCGRG | 5 cut(s) | 70, 387, 712, 1104, 1239 |
| AvaII | GGWCC | 6 cut(s) | 53, 887, 947, 971, 1019, 1148 |
| AxyI | CCTNAGG | 1 cut(s) | 218 |
| BaeGI | GKGCMC | 2 cut(s) | 241, 1167 |
| BanI | GGYRCC | 4 cut(s) | 92, 236, 692, 1228 |
| BanII | GRGCYC | 2 cut(s) | 472, 880 |
| Bbv12I | GWGCWC | 1 cut(s) | 880 |
| BbvI | GCAGC | 6 cut(s) | 136, 496, 805, 832, 1123, 1126 |
| BccI | CCATC | 2 cut(s) | 328, 509 |
| BceAI | ACGGC | 2 cut(s) | 95, 831 |
| BciT130I | CCWGG | 5 cut(s) | 51, 894, 927, 1044, 1089 |
| BciVI | GTATCC | 1 cut(s) | 541 |
| BcnI | CCSGG | 6 cut(s) | 71, 72, 713, 714, 1105, 1106 |
| BcoDI | GTCTC | 1 cut(s) | 1033 |
| BfaI | CTAG | 2 cut(s) | 630, 1131 |
| BfmI | CTRYAG | 2 cut(s) | 377, 541 |
| BfoI | RGCGCY | 2 cut(s) | 96, 837 |
| BfuAI | ACCTGC | 3 cut(s) | 958, 982, 1030 |
| BfuI | GTATCC | 1 cut(s) | 541 |
| Bme18I | GGWCC | 6 cut(s) | 53, 887, 947, 971, 1019, 1148 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 349 |
| BmeT110I | CYCGRG | 5 cut(s) | 70, 387, 712, 1104, 1239 |
| BmgBI | CACGTC | 1 cut(s) | 794 |
| BmgT120I | GGNCC | 9 cut(s) | 53, 68, 397, 887, 923, 947, 971, 1019, 1148 |
| BmiI | GGNNCC | 7 cut(s) | 55, 94, 238, 311, 694, 709, 1230 |
| BmrI | ACTGGG | 3 cut(s) | 747, 1227, 1256 |
| BmsI | GCATC | 3 cut(s) | 156, 949, 1111 |
| BmuI | ACTGGG | 3 cut(s) | 747, 1227, 1256 |
| Bpu14I | TTCGAA | 1 cut(s) | 1267 |
| BpuEI | CTTGAG | 1 cut(s) | 1137 |
| BpuMI | CCSGG | 6 cut(s) | 71, 72, 713, 714, 1105, 1106 |
| Bsa29I | ATCGAT | 1 cut(s) | 937 |
| BsaHI | GRCGYC | 1 cut(s) | 93 |
| BsaI | GGTCTC | 1 cut(s) | 1033 |
| BsaJI | CCNNGG | 9 cut(s) | 70, 88, 208, 393, 624, 711, 712, 1104, 1105 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 676, 706, 790, 820 |
| Bse118I | RCCGGY | 1 cut(s) | 233 |
| Bse1I | ACTGG | 4 cut(s) | 694, 742, 1222, 1251 |
| Bse21I | CCTNAGG | 1 cut(s) | 218 |
| Bse3DI | GCAATG | 1 cut(s) | 1180 |
| BseBI | CCWGG | 5 cut(s) | 51, 894, 927, 1044, 1089 |
| BseCI | ATCGAT | 1 cut(s) | 937 |
| BseDI | CCNNGG | 9 cut(s) | 70, 88, 208, 393, 624, 711, 712, 1104, 1105 |
| BseGI | GGATG | 1 cut(s) | 484 |
| BseMI | GCAATG | 1 cut(s) | 1180 |
| BseMII | CTCAG | 3 cut(s) | 209, 279, 512 |
| BseNI | ACTGG | 4 cut(s) | 694, 742, 1222, 1251 |
| BseRI | GAGGAG | 2 cut(s) | 111, 322 |
| BseSI | GKGCMC | 2 cut(s) | 241, 1167 |
| BseX3I | CGGCCG | 2 cut(s) | 41, 80 |
| BseXI | GCAGC | 6 cut(s) | 136, 496, 805, 832, 1123, 1126 |
| BsgI | GTGCAG | 2 cut(s) | 135, 503 |
| Bsh1236I | CGCG | 1 cut(s) | 1209 |
| Bsh1285I | CGRYCG | 3 cut(s) | 44, 83, 941 |
| BshFI | GGCC | 6 cut(s) | 43, 69, 82, 233, 398, 925 |
| BshNI | GGYRCC | 4 cut(s) | 92, 236, 692, 1228 |
| BshVI | ATCGAT | 1 cut(s) | 937 |
| BsiEI | CGRYCG | 3 cut(s) | 44, 83, 941 |
| BsiHKAI | GWGCWC | 1 cut(s) | 880 |
| BsiHKCI | CYCGRG | 5 cut(s) | 70, 387, 712, 1104, 1239 |
| BsiSI | CCGG | 4 cut(s) | 71, 234, 713, 1105 |
| BslFI | GGGAC | 1 cut(s) | 804 |
| BsmAI | GTCTC | 1 cut(s) | 1033 |
| BsmFI | GGGAC | 1 cut(s) | 804 |
| BsnI | GGCC | 6 cut(s) | 43, 69, 82, 233, 398, 925 |
| Bso31I | GGTCTC | 1 cut(s) | 1033 |
| BsoBI | CYCGRG | 5 cut(s) | 70, 387, 712, 1104, 1239 |
| Bsp119I | TTCGAA | 1 cut(s) | 1267 |
| Bsp1286I | GDGCHC | 4 cut(s) | 241, 472, 880, 1167 |
| Bsp143I | GATC | 9 cut(s) | 457, 679, 934, 938, 982, 995, 1006, 1061, 1096 |
| Bsp19I | CCATGG | 2 cut(s) | 88, 624 |
| BspANI | GGCC | 6 cut(s) | 43, 69, 82, 233, 398, 925 |
| BspCNI | CTCAG | 3 cut(s) | 210, 280, 513 |
| BspDI | ATCGAT | 1 cut(s) | 937 |
| BspFNI | CGCG | 1 cut(s) | 1209 |
| BspHI | TCATGA | 1 cut(s) | 955 |
| BspLI | GGNNCC | 7 cut(s) | 55, 94, 238, 311, 694, 709, 1230 |
| BspMAI | CTGCAG | 1 cut(s) | 545 |
| BspMI | ACCTGC | 3 cut(s) | 958, 982, 1030 |
| BspPI | GGATC | 5 cut(s) | 465, 977, 1001, 1003, 1091 |
| BspT104I | TTCGAA | 1 cut(s) | 1267 |
| BspT107I | GGYRCC | 4 cut(s) | 92, 236, 692, 1228 |
| BspTNI | GGTCTC | 1 cut(s) | 1033 |
| BsrDI | GCAATG | 1 cut(s) | 1180 |
| BsrFI | RCCGGY | 1 cut(s) | 233 |
| BsrI | ACTGG | 4 cut(s) | 694, 742, 1222, 1251 |
| BssAI | RCCGGY | 1 cut(s) | 233 |
| BssECI | CCNNGG | 9 cut(s) | 70, 88, 208, 393, 624, 711, 712, 1104, 1105 |
| BssMI | GATC | 9 cut(s) | 457, 679, 934, 938, 982, 995, 1006, 1061, 1096 |
| BssNI | GRCGYC | 1 cut(s) | 93 |
| BssT1I | CCWWGG | 2 cut(s) | 88, 624 |
| Bst2UI | CCWGG | 5 cut(s) | 51, 894, 927, 1044, 1089 |
| Bst4CI | ACNGT | 3 cut(s) | 853, 904, 1128 |
| BstACI | GRCGYC | 1 cut(s) | 93 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1084 |
| BstBI | TTCGAA | 1 cut(s) | 1267 |
| BstC8I | GCNNGC | 7 cut(s) | 147, 198, 231, 744, 832, 838, 1144 |
| BstDEI | CTNAG | 3 cut(s) | 218, 288, 521 |
| BstDSI | CCRYGG | 3 cut(s) | 88, 208, 624 |
| BstF5I | GGATG | 1 cut(s) | 484 |
| BstFNI | CGCG | 1 cut(s) | 1209 |
| BstH2I | RGCGCY | 2 cut(s) | 96, 837 |
| BstHHI | GCGC | 2 cut(s) | 95, 836 |
| BstKTI | GATC | 9 cut(s) | 460, 682, 937, 941, 985, 998, 1009, 1064, 1099 |
| BstMAI | GTCTC | 1 cut(s) | 1033 |
| BstMBI | GATC | 9 cut(s) | 457, 679, 934, 938, 982, 995, 1006, 1061, 1096 |
| BstMCI | CGRYCG | 3 cut(s) | 44, 83, 941 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 43, 503, 818, 827, 842, 959, 1031, 1084 |
| BstNI | CCWGG | 5 cut(s) | 51, 894, 927, 1044, 1089 |
| BstNSI | RCATGY | 4 cut(s) | 37, 161, 266, 1163 |
| BstSFI | CTRYAG | 2 cut(s) | 377, 541 |
| BstSLI | GKGCMC | 2 cut(s) | 241, 1167 |
| BstUI | CGCG | 1 cut(s) | 1209 |
| BstV1I | GCAGC | 6 cut(s) | 136, 496, 805, 832, 1123, 1126 |
| BstX2I | RGATCY | 2 cut(s) | 457, 995 |
| BstYI | RGATCY | 2 cut(s) | 457, 995 |
| BstZI | CGGCCG | 2 cut(s) | 41, 80 |
| Bsu15I | ATCGAT | 1 cut(s) | 937 |
| Bsu36I | CCTNAGG | 1 cut(s) | 218 |
| BsuI | GTATCC | 1 cut(s) | 541 |
| BsuRI | GGCC | 6 cut(s) | 43, 69, 82, 233, 398, 925 |
| BsuTUI | ATCGAT | 1 cut(s) | 937 |
| BtgI | CCRYGG | 3 cut(s) | 88, 208, 624 |
| BtrI | CACGTC | 1 cut(s) | 794 |
| BtsCI | GGATG | 1 cut(s) | 484 |
| BtsIMutI | CAGTG | 1 cut(s) | 605 |
| BveI | ACCTGC | 3 cut(s) | 958, 982, 1030 |
| Cac8I | GCNNGC | 7 cut(s) | 147, 198, 231, 744, 832, 838, 1144 |
| CaiI | CAGNNNCTG | 1 cut(s) | 145 |
| CciI | TCATGA | 1 cut(s) | 955 |
| CfoI | GCGC | 2 cut(s) | 95, 836 |
| Cfr10I | RCCGGY | 1 cut(s) | 233 |
| Cfr13I | GGNCC | 9 cut(s) | 53, 68, 397, 887, 923, 947, 971, 1019, 1148 |
| Cfr9I | CCCGGG | 3 cut(s) | 70, 712, 1104 |
| ClaI | ATCGAT | 1 cut(s) | 937 |
| CseI | GACGC | 3 cut(s) | 26, 920, 1040 |
| DdeI | CTNAG | 3 cut(s) | 218, 288, 521 |
| DinI | GGCGCC | 1 cut(s) | 94 |
| DpnI | GATC | 9 cut(s) | 459, 681, 936, 940, 984, 997, 1008, 1063, 1098 |
| DpnII | GATC | 9 cut(s) | 457, 679, 934, 938, 982, 995, 1006, 1061, 1096 |
| DriI | GACNNNNNGTC | 1 cut(s) | 349 |
| EaeI | YGGCCR | 3 cut(s) | 41, 80, 231 |
| EagI | CGGCCG | 2 cut(s) | 41, 80 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 349 |
| EciI | GGCGGA | 1 cut(s) | 386 |
| Ecl136II | GAGCTC | 1 cut(s) | 878 |
| EclXI | CGGCCG | 2 cut(s) | 41, 80 |
| Eco130I | CCWWGG | 2 cut(s) | 88, 624 |
| Eco24I | GRGCYC | 2 cut(s) | 472, 880 |
| Eco31I | GGTCTC | 1 cut(s) | 1033 |
| Eco47I | GGWCC | 6 cut(s) | 53, 887, 947, 971, 1019, 1148 |
| Eco52I | CGGCCG | 2 cut(s) | 41, 80 |
| Eco53kI | GAGCTC | 1 cut(s) | 878 |
| Eco57I | CTGAAG | 2 cut(s) | 446, 581 |
| Eco81I | CCTNAGG | 1 cut(s) | 218 |
| Eco88I | CYCGRG | 5 cut(s) | 70, 387, 712, 1104, 1239 |
| EcoICRI | GAGCTC | 1 cut(s) | 878 |
| EcoO109I | RGGNCCY | 3 cut(s) | 923, 971, 1019 |
| EcoRII | CCWGG | 5 cut(s) | 49, 892, 925, 1042, 1087 |
| EcoT14I | CCWWGG | 2 cut(s) | 88, 624 |
| EcoT38I | GRGCYC | 2 cut(s) | 472, 880 |
| EgeI | GGCGCC | 1 cut(s) | 94 |
| EheI | GGCGCC | 1 cut(s) | 94 |
| ErhI | CCWWGG | 2 cut(s) | 88, 624 |
| FaqI | GGGAC | 1 cut(s) | 804 |
| FauI | CCCGC | 2 cut(s) | 30, 1202 |
| FauNDI | CATATG | 1 cut(s) | 553 |
| FokI | GGATG | 1 cut(s) | 491 |
| FriOI | GRGCYC | 2 cut(s) | 472, 880 |
| FspBI | CTAG | 2 cut(s) | 630, 1131 |
| GlaI | GCGC | 2 cut(s) | 94, 835 |
| HaeII | RGCGCY | 2 cut(s) | 96, 837 |
| HaeIII | GGCC | 6 cut(s) | 43, 69, 82, 233, 398, 925 |
| HapII | CCGG | 4 cut(s) | 71, 234, 713, 1105 |
| HgaI | GACGC | 3 cut(s) | 26, 920, 1040 |
| HhaI | GCGC | 2 cut(s) | 95, 836 |
| Hin1I | GRCGYC | 1 cut(s) | 93 |
| Hin6I | GCGC | 2 cut(s) | 93, 834 |
| HinP1I | GCGC | 2 cut(s) | 93, 834 |
| HincII | GTYRAC | 1 cut(s) | 1114 |
| HindII | GTYRAC | 1 cut(s) | 1114 |
| HinfI | GANTC | 4 cut(s) | 18, 187, 490, 590 |
| HpaII | CCGG | 4 cut(s) | 71, 234, 713, 1105 |
| Hpy166II | GTNNAC | 2 cut(s) | 947, 1114 |
| Hpy188I | TCNGA | 5 cut(s) | 192, 289, 465, 650, 684 |
| Hpy188III | TCNNGA | 4 cut(s) | 856, 885, 956, 1131 |
| Hpy8I | GTNNAC | 2 cut(s) | 947, 1114 |
| Hpy99I | CGWCG | 1 cut(s) | 42 |
| HpyAV | CCTTC | 4 cut(s) | 36, 376, 811, 891 |
| HpyCH4III | ACNGT | 3 cut(s) | 853, 904, 1128 |
| HpyCH4IV | ACGT | 1 cut(s) | 793 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 43, 503, 818, 827, 842, 959, 1031, 1084 |
| HpyF3I | CTNAG | 3 cut(s) | 218, 288, 521 |
| HpySE526I | ACGT | 1 cut(s) | 793 |
| Hsp92I | GRCGYC | 1 cut(s) | 93 |
| HspAI | GCGC | 2 cut(s) | 93, 834 |
| KasI | GGCGCC | 1 cut(s) | 92 |
| Kzo9I | GATC | 9 cut(s) | 457, 679, 934, 938, 982, 995, 1006, 1061, 1096 |
| LmnI | GCTCC | 6 cut(s) | 136, 275, 309, 373, 651, 875 |
| Lsp1109I | GCAGC | 6 cut(s) | 136, 496, 805, 832, 1123, 1126 |
| LweI | GCATC | 3 cut(s) | 156, 949, 1111 |
| MaeI | CTAG | 2 cut(s) | 630, 1131 |
| MaeII | ACGT | 1 cut(s) | 793 |
| MaeIII | GTNAC | 3 cut(s) | 619, 657, 1067 |
| MalI | GATC | 9 cut(s) | 459, 681, 936, 940, 984, 997, 1008, 1063, 1098 |
| MboI | GATC | 9 cut(s) | 457, 679, 934, 938, 982, 995, 1006, 1061, 1096 |
| MboII | GAAGA | 3 cut(s) | 452, 622, 779 |
| MflI | RGATCY | 2 cut(s) | 457, 995 |
| MhlI | GDGCHC | 4 cut(s) | 241, 472, 880, 1167 |
| MluCI | AATT | 2 cut(s) | 248, 667 |
| Mly113I | GGCGCC | 1 cut(s) | 93 |
| MmeI | TCCRAC | 2 cut(s) | 853, 1124 |
| MroXI | GAANNNNTTC | 1 cut(s) | 594 |
| MseI | TTAA | 1 cut(s) | 366 |
| MslI | CAYNNNNRTG | 2 cut(s) | 477, 598 |
| MspI | CCGG | 4 cut(s) | 71, 234, 713, 1105 |
| MvaI | CCWGG | 5 cut(s) | 51, 894, 927, 1044, 1089 |
| MvnI | CGCG | 1 cut(s) | 1209 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 43, 503, 818, 827, 842, 959, 1031, 1084 |
| NarI | GGCGCC | 1 cut(s) | 93 |
| NciI | CCSGG | 6 cut(s) | 71, 72, 713, 714, 1105, 1106 |
| NcoI | CCATGG | 2 cut(s) | 88, 624 |
| NdeI | CATATG | 1 cut(s) | 553 |
| NdeII | GATC | 9 cut(s) | 457, 679, 934, 938, 982, 995, 1006, 1061, 1096 |
| NlaIV | GGNNCC | 7 cut(s) | 55, 94, 238, 311, 694, 709, 1230 |
| NmeAIII | GCCGAG | 1 cut(s) | 418 |
| NspI | RCATGY | 4 cut(s) | 37, 161, 266, 1163 |
| NspV | TTCGAA | 1 cut(s) | 1267 |
| OliI | CACNNNNGTG | 1 cut(s) | 598 |
| PaeR7I | CTCGAG | 2 cut(s) | 387, 1239 |
| PagI | TCATGA | 1 cut(s) | 955 |
| PciI | ACATGT | 2 cut(s) | 157, 1159 |
| PdmI | GAANNNNTTC | 1 cut(s) | 594 |
| PfeI | GAWTC | 4 cut(s) | 18, 187, 490, 590 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 406, 872 |
| PfoI | TCCNGGA | 2 cut(s) | 49, 892 |
| Ple19I | CGATCG | 1 cut(s) | 941 |
| PluTI | GGCGCC | 1 cut(s) | 96 |
| PpuMI | RGGWCCY | 2 cut(s) | 971, 1019 |
| PscI | ACATGT | 2 cut(s) | 157, 1159 |
| Psp124BI | GAGCTC | 1 cut(s) | 880 |
| Psp5II | RGGWCCY | 2 cut(s) | 971, 1019 |
| Psp6I | CCWGG | 5 cut(s) | 49, 892, 925, 1042, 1087 |
| PspGI | CCWGG | 5 cut(s) | 49, 892, 925, 1042, 1087 |
| PspN4I | GGNNCC | 7 cut(s) | 55, 94, 238, 311, 694, 709, 1230 |
| PspPI | GGNCC | 9 cut(s) | 53, 68, 397, 887, 923, 947, 971, 1019, 1148 |
| PspPPI | RGGWCCY | 2 cut(s) | 971, 1019 |
| PspXI | VCTCGAGB | 2 cut(s) | 387, 1239 |
| PstI | CTGCAG | 1 cut(s) | 545 |
| PstNI | CAGNNNCTG | 1 cut(s) | 145 |
| PsuI | RGATCY | 2 cut(s) | 457, 995 |
| PvuI | CGATCG | 1 cut(s) | 941 |
| RseI | CAYNNNNRTG | 2 cut(s) | 477, 598 |
| SacI | GAGCTC | 1 cut(s) | 880 |
| SaqAI | TTAA | 1 cut(s) | 366 |
| Sau3AI | GATC | 9 cut(s) | 457, 679, 934, 938, 982, 995, 1006, 1061, 1096 |
| Sau96I | GGNCC | 9 cut(s) | 53, 68, 397, 887, 923, 947, 971, 1019, 1148 |
| SduI | GDGCHC | 4 cut(s) | 241, 472, 880, 1167 |
| SfaNI | GCATC | 3 cut(s) | 156, 949, 1111 |
| SfcI | CTRYAG | 2 cut(s) | 377, 541 |
| SfoI | GGCGCC | 1 cut(s) | 94 |
| Sfr274I | CTCGAG | 2 cut(s) | 387, 1239 |
| SfuI | TTCGAA | 1 cut(s) | 1267 |
| SinI | GGWCC | 6 cut(s) | 53, 887, 947, 971, 1019, 1148 |
| SlaI | CTCGAG | 2 cut(s) | 387, 1239 |
| SmaI | CCCGGG | 3 cut(s) | 72, 714, 1106 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 477, 598 |
| SmlI | CTYRAG | 3 cut(s) | 387, 1152, 1239 |
| SmoI | CTYRAG | 3 cut(s) | 387, 1152, 1239 |
| SrfI | GCCCGGGC | 1 cut(s) | 72 |
| Sse9I | AATT | 2 cut(s) | 248, 667 |
| SspDI | GGCGCC | 1 cut(s) | 92 |
| SspMI | CTAG | 2 cut(s) | 630, 1131 |
| SstI | GAGCTC | 1 cut(s) | 880 |
| StyI | CCWWGG | 2 cut(s) | 88, 624 |
| TaaI | ACNGT | 3 cut(s) | 853, 904, 1128 |
| TaiI | ACGT | 1 cut(s) | 796 |
| TaqI | TCGA | 5 cut(s) | 16, 388, 937, 1240, 1267 |
| TasI | AATT | 2 cut(s) | 248, 667 |
| TauI | GCSGC | 4 cut(s) | 46, 85, 203, 824 |
| TfiI | GAWTC | 4 cut(s) | 18, 187, 490, 590 |
| Tru1I | TTAA | 1 cut(s) | 366 |
| Tru9I | TTAA | 1 cut(s) | 366 |
| TscAI | CASTG | 1 cut(s) | 605 |
| TseI | GCWGC | 6 cut(s) | 149, 484, 818, 845, 1136, 1139 |
| TspDTI | ATGAA | 2 cut(s) | 261, 576 |
| TspGWI | ACGGA | 2 cut(s) | 93, 225 |
| TspMI | CCCGGG | 3 cut(s) | 70, 712, 1104 |
| TspRI | CASTG | 1 cut(s) | 605 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 406, 872 |
| VpaK11BI | GGWCC | 6 cut(s) | 53, 887, 947, 971, 1019, 1148 |
| XbaI | TCTAGA | 1 cut(s) | 1130 |
| XceI | RCATGY | 4 cut(s) | 37, 161, 266, 1163 |
| XhoI | CTCGAG | 2 cut(s) | 387, 1239 |
| XmaI | CCCGGG | 3 cut(s) | 70, 712, 1104 |
| XmnI | GAANNNNTTC | 1 cut(s) | 594 |
| XspI | CTAG | 2 cut(s) | 630, 1131 |