Rh2CG554300

FLX-like 2

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
73292256 .. 73295408
3153 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG554300.1

Sequence Viewer

Length: 1269 bp
ATGGGAAGTAAAGGTCGAATCCCACCGGCCCATCTCCGGCGTCCTCATCCCGGACCCGACCCGTATGGGCCTGGTGGGCCGGGCACCCGCCCACCTCCGGGTGCCTATTCACCCTTTGACATGTTGCCTCCTCCACAAGTTTTGGAGCAGAAGCTGGCTTCACAGCATGTGGAGATGCAGAGGCTGGCAACAGAGAACCAGAGACTGGCTTCGACGCACGGCAGCCTCAGGCAGGAGCTGGCAGGAGCTCAGCATGAGCTGCAGATACTGCATGCTCAGGCCGGAGCTATGAAGTCGGAGAGGGATCAGCAGATGAGGAGCCTGGTGGATAAGATTGCGAAAATGGAGGCTGAGCTGAAAGCGGCGGAGTCTGTTAAGGTGGAGCTGCAGCAGGTGCGTGCTGAAGCGAATAACTTGGTTGGGGCGAGGCAGGAGAGTATTGTTAAAGTGCAGCAGTTGAGTCAGGATCTTCAGAGGGCGCAGGGGGATGTGCAGCAGATTCCGGTTTTGGTTCAGCAACTCGATGGCCTCAGGCAGGAGTATCAGCATTGCAGGGCTACTTTTGACTATGAAAAGAAATTGTACAATGACCACCTTGAATCACTTCAGGTCATGGAGAAGAACTATGTTACCATGGCTAGGGAGGTAGAAAAGCTACGAGCAGAGTTATTGAATAATTCTGGTGCTGATAGAAGAACTGGTGGGTCTTATTATGGGAATCCTGGAACTAATGAAAGTGAGGCTTCTGGGCTTGCTGCAGGACAAAATGCTTATGAAGATAGCTATGGTGTTCCCCAGGGACGTGTCCCCTTCCCTCCTACTGCTGGTGGTGGTGGTCAAAGTGGGCCTGGGGGCAGTGCTGGTGCCGCTTCTGGCGGTGCTGCTGCCGCCACCCCTGCCGGAACTTCTCCGTTTGCTGGATCTCAATCTGGACCTCCTGGAAGGACCGCTTATGATGCACCAAGAGGGCCTGTTGGTTATGATCCCTCTGGAGGATCTGCTTATGATGCACAAAGAACTGGCTATGATCCACAAAGAGGAGCTGTCTATGATGTACATAGGCCAGGTTATGAGGTGCAAAGAGGAGCCGGTTATGATCCGACCCGGGGTCTTAACTATGATGCACAGTCCAGAGGTGCTTCTGGTCCCCAGGGACATGTGCCTACAAGCAATATGCCCTATGGTTCAGCCACTCCACCTACTGCTCGAGGGGGAACTGGGTATGAGGCACCGCCACCTCGAGGAGGTGCAAACCCAGTTCGTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

422

Amino Acids

44.69

Weight (kDa)

7.83

Isoelectric Point (pI)

48.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011129)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 382
AbsI CCTCGAGG 1 cut(s) 1239
Acc36I ACCTGC 1 cut(s) 382
AccB1I GGYRCC 4 cut(s) 83, 101, 863, 1228
AccB7I CCANNNNNTGG 1 cut(s) 205
AciI CCGC 8 cut(s) 88, 362, 365, 867, 876, 888, 948, 1232
AclWI GGATC 7 cut(s) 312, 474, 928, 977, 1003, 1022, 1091
AcuI CTGAAG 3 cut(s) 423, 455, 590
AcyI GRCGYC 1 cut(s) 40
AfaI GTAC 2 cut(s) 584, 1056
AflIII ACRYGT 3 cut(s) 120, 802, 1156
AgsI TTSAA 2 cut(s) 599, 673
AhdI GACNNNNNGTC 1 cut(s) 1107
AjiI CACGTC 1 cut(s) 803
AjnI CCWGG 8 cut(s) 70, 321, 721, 795, 847, 937, 1063, 1149
Alw21I GWGCWC 1 cut(s) 250
Alw26I GTCTC 1 cut(s) 196
AlwI GGATC 7 cut(s) 312, 474, 928, 977, 1003, 1022, 1091
AlwNI CAGNNNCTG 5 cut(s) 154, 184, 205, 238, 268
Ama87I CYCGRG 3 cut(s) 1104, 1206, 1239
AoxI GGCC 8 cut(s) 27, 68, 77, 279, 526, 845, 968, 1061
ApeKI GCWGC 9 cut(s) 222, 259, 385, 388, 451, 493, 755, 881, 884
Asp700I GAANNNNTTC 1 cut(s) 603
AspLEI GCGC 1 cut(s) 481
AspS9I GGNCC 9 cut(s) 28, 53, 68, 77, 845, 932, 945, 968, 1145
AsuC2I CCSGG 5 cut(s) 51, 81, 99, 1105, 1106
AsuHPI GGTGA 1 cut(s) 102
AvaI CYCGRG 3 cut(s) 1104, 1206, 1239
AvaII GGWCC 4 cut(s) 53, 932, 945, 1145
AxyI CCTNAGG 2 cut(s) 227, 530
BaeGI GKGCMC 1 cut(s) 86
BanI GGYRCC 4 cut(s) 83, 101, 863, 1228
BanII GRGCYC 1 cut(s) 250
Bbv12I GWGCWC 1 cut(s) 250
BbvI GCAGC 9 cut(s) 234, 246, 372, 400, 463, 505, 742, 868, 871
BccI CCATC 2 cut(s) 39, 518
BceAI ACGGC 1 cut(s) 235
BciT130I CCWGG 8 cut(s) 72, 323, 723, 797, 849, 939, 1065, 1151
BcnI CCSGG 5 cut(s) 51, 81, 99, 1105, 1106
BcoDI GTCTC 1 cut(s) 196
BfaI CTAG 1 cut(s) 639
BfmI CTRYAG 3 cut(s) 260, 386, 756
BfuAI ACCTGC 1 cut(s) 382
BglI GCCNNNNNGGC 1 cut(s) 76
BlpI GCTNAGC 2 cut(s) 249, 351
Bme18I GGWCC 4 cut(s) 53, 932, 945, 1145
BmeRI GACNNNNNGTC 1 cut(s) 1107
BmeT110I CYCGRG 3 cut(s) 1104, 1206, 1239
BmgBI CACGTC 1 cut(s) 803
BmgT120I GGNCC 9 cut(s) 28, 53, 68, 77, 845, 932, 945, 968, 1145
BmiI GGNNCC 8 cut(s) 55, 85, 103, 320, 865, 1087, 1147, 1230
BmrI ACTGGG 2 cut(s) 1227, 1250
BmsI GCATC 4 cut(s) 165, 946, 997, 1111
BmuI ACTGGG 2 cut(s) 1227, 1250
BpmI CTGGAG 1 cut(s) 1011
Bpu10I CCTNAGC 1 cut(s) 276
Bpu1102I GCTNAGC 2 cut(s) 249, 351
BpuMI CCSGG 5 cut(s) 51, 81, 99, 1105, 1106
BsaBI GATNNNNATC 1 cut(s) 925
BsaHI GRCGYC 1 cut(s) 40
BsaJI CCNNGG 8 cut(s) 633, 795, 796, 848, 1104, 1105, 1149, 1150
BsaWI WCCGGW 1 cut(s) 502
Bse118I RCCGGY 2 cut(s) 25, 1088
Bse1I ACTGG 5 cut(s) 210, 703, 1024, 1222, 1256
Bse21I CCTNAGG 2 cut(s) 227, 530
Bse3DI GCAATG 1 cut(s) 547
Bse8I GATNNNNATC 1 cut(s) 925
BseBI CCWGG 8 cut(s) 72, 323, 723, 797, 849, 939, 1065, 1151
BseDI CCNNGG 8 cut(s) 633, 795, 796, 848, 1104, 1105, 1149, 1150
BseGI GGATG 2 cut(s) 46, 493
BseJI GATNNNNATC 1 cut(s) 925
BseMI GCAATG 1 cut(s) 547
BseMII CTCAG 5 cut(s) 241, 263, 290, 342, 544
BseNI ACTGG 5 cut(s) 210, 703, 1024, 1222, 1256
BseRI GAGGAG 5 cut(s) 120, 331, 1053, 1098, 1257
BseSI GKGCMC 1 cut(s) 86
BseXI GCAGC 9 cut(s) 234, 246, 372, 400, 463, 505, 742, 868, 871
BsgI GTGCAG 2 cut(s) 470, 512
BshFI GGCC 8 cut(s) 29, 70, 79, 281, 528, 847, 970, 1063
BshNI GGYRCC 4 cut(s) 83, 101, 863, 1228
BsiHKAI GWGCWC 1 cut(s) 250
BsiHKCI CYCGRG 3 cut(s) 1104, 1206, 1239
BslFI GGGAC 4 cut(s) 791, 813, 1131, 1167
BsmAI GTCTC 1 cut(s) 196
BsmFI GGGAC 4 cut(s) 791, 813, 1131, 1167
BsnI GGCC 8 cut(s) 29, 70, 79, 281, 528, 847, 970, 1063
BsoBI CYCGRG 3 cut(s) 1104, 1206, 1239
Bsp1286I GDGCHC 2 cut(s) 86, 250
Bsp1407I TGTACA 2 cut(s) 582, 1054
Bsp143I GATC 7 cut(s) 304, 466, 920, 982, 995, 1027, 1096
Bsp1720I GCTNAGC 2 cut(s) 249, 351
Bsp19I CCATGG 1 cut(s) 633
BspACI CCGC 8 cut(s) 88, 362, 365, 867, 876, 888, 948, 1232
BspANI GGCC 8 cut(s) 29, 70, 79, 281, 528, 847, 970, 1063
BspCNI CTCAG 5 cut(s) 240, 262, 289, 343, 543
BspLI GGNNCC 8 cut(s) 55, 85, 103, 320, 865, 1087, 1147, 1230
BspMAI CTGCAG 3 cut(s) 264, 390, 760
BspMI ACCTGC 1 cut(s) 382
BspPI GGATC 7 cut(s) 312, 474, 928, 977, 1003, 1022, 1091
BspT107I GGYRCC 4 cut(s) 83, 101, 863, 1228
BsrDI GCAATG 1 cut(s) 547
BsrFI RCCGGY 2 cut(s) 25, 1088
BsrGI TGTACA 2 cut(s) 582, 1054
BsrI ACTGG 5 cut(s) 210, 703, 1024, 1222, 1256
BssAI RCCGGY 2 cut(s) 25, 1088
BssECI CCNNGG 8 cut(s) 633, 795, 796, 848, 1104, 1105, 1149, 1150
BssMI GATC 7 cut(s) 304, 466, 920, 982, 995, 1027, 1096
BssNI GRCGYC 1 cut(s) 40
BssT1I CCWWGG 1 cut(s) 633
Bst2UI CCWGG 8 cut(s) 72, 323, 723, 797, 849, 939, 1065, 1151
Bst4CI ACNGT 1 cut(s) 1128
BstACI GRCGYC 1 cut(s) 40
BstAPI GCANNNNNTGC 3 cut(s) 259, 268, 394
BstAUI TGTACA 2 cut(s) 582, 1054
BstC8I GCNNGC 6 cut(s) 156, 186, 240, 273, 399, 753
BstDEI CTNAG 5 cut(s) 227, 249, 276, 351, 530
BstDSI CCRYGG 1 cut(s) 633
BstENI CCTNNNNNAGG 3 cut(s) 230, 533, 1242
BstF5I GGATG 2 cut(s) 46, 493
BstHHI GCGC 1 cut(s) 481
BstKTI GATC 7 cut(s) 307, 469, 923, 985, 998, 1030, 1099
BstMAI GTCTC 1 cut(s) 196
BstMBI GATC 7 cut(s) 304, 466, 920, 982, 995, 1027, 1096
BstMWI GCNNNNNNNGC 9 cut(s) 76, 259, 268, 394, 866, 887, 896, 956, 1007
BstNI CCWGG 8 cut(s) 72, 323, 723, 797, 849, 939, 1065, 1151
BstNSI RCATGY 4 cut(s) 124, 170, 275, 1160
BstSFI CTRYAG 3 cut(s) 260, 386, 756
BstSLI GKGCMC 1 cut(s) 86
BstV1I GCAGC 9 cut(s) 234, 246, 372, 400, 463, 505, 742, 868, 871
BstX2I RGATCY 3 cut(s) 466, 920, 995
BstYI RGATCY 3 cut(s) 466, 920, 995
Bsu36I CCTNAGG 2 cut(s) 227, 530
BsuRI GGCC 8 cut(s) 29, 70, 79, 281, 528, 847, 970, 1063
BtgI CCRYGG 1 cut(s) 633
BtrI CACGTC 1 cut(s) 803
BtsCI GGATG 2 cut(s) 46, 493
BtsI GCAGTG 1 cut(s) 862
BtsIMutI CAGTG 1 cut(s) 862
BveI ACCTGC 1 cut(s) 382
Cac8I GCNNGC 6 cut(s) 156, 186, 240, 273, 399, 753
CaiI CAGNNNCTG 5 cut(s) 154, 184, 205, 238, 268
CfoI GCGC 1 cut(s) 481
Cfr10I RCCGGY 2 cut(s) 25, 1088
Cfr13I GGNCC 9 cut(s) 28, 53, 68, 77, 845, 932, 945, 968, 1145
Cfr9I CCCGGG 1 cut(s) 1104
CseI GACGC 2 cut(s) 29, 223
Csp6I GTAC 2 cut(s) 583, 1055
CspCI CAANNNNNGTGG 2 cut(s) 123, 158
CviAII CATG 7 cut(s) 121, 167, 254, 272, 613, 634, 1157
CviQI GTAC 2 cut(s) 583, 1055
DdeI CTNAG 5 cut(s) 227, 249, 276, 351, 530
DpnI GATC 7 cut(s) 306, 468, 922, 984, 997, 1029, 1098
DpnII GATC 7 cut(s) 304, 466, 920, 982, 995, 1027, 1096
DriI GACNNNNNGTC 1 cut(s) 1107
Eam1105I GACNNNNNGTC 1 cut(s) 1107
EciI GGCGGA 1 cut(s) 380
Ecl136II GAGCTC 1 cut(s) 248
Eco130I CCWWGG 1 cut(s) 633
Eco24I GRGCYC 1 cut(s) 250
Eco47I GGWCC 4 cut(s) 53, 932, 945, 1145
Eco53kI GAGCTC 1 cut(s) 248
Eco57I CTGAAG 3 cut(s) 423, 455, 590
Eco81I CCTNAGG 2 cut(s) 227, 530
Eco88I CYCGRG 3 cut(s) 1104, 1206, 1239
EcoICRI GAGCTC 1 cut(s) 248
EcoNI CCTNNNNNAGG 3 cut(s) 230, 533, 1242
EcoO109I RGGNCCY 1 cut(s) 968
EcoRII CCWGG 8 cut(s) 70, 321, 721, 795, 847, 937, 1063, 1149
EcoT14I CCWWGG 1 cut(s) 633
EcoT38I GRGCYC 1 cut(s) 250
ErhI CCWWGG 1 cut(s) 633
FaeI CATG 7 cut(s) 124, 170, 257, 275, 616, 637, 1160
FalI AAGNNNNNCTT 4 cut(s) 727, 759, 934, 966
FaqI GGGAC 4 cut(s) 791, 813, 1131, 1167
FatI CATG 7 cut(s) 120, 166, 253, 271, 612, 633, 1156
FauI CCCGC 1 cut(s) 95
FokI GGATG 2 cut(s) 33, 500
FriOI GRGCYC 1 cut(s) 250
FspBI CTAG 1 cut(s) 639
GlaI GCGC 1 cut(s) 480
GsuI CTGGAG 1 cut(s) 1011
HaeIII GGCC 8 cut(s) 29, 70, 79, 281, 528, 847, 970, 1063
HgaI GACGC 2 cut(s) 29, 223
HhaI GCGC 1 cut(s) 481
Hin1I GRCGYC 1 cut(s) 40
Hin1II CATG 7 cut(s) 124, 170, 257, 275, 616, 637, 1160
Hin6I GCGC 1 cut(s) 479
HinP1I GCGC 1 cut(s) 479
HinfI GANTC 6 cut(s) 18, 368, 460, 499, 599, 718
HphI GGTGA 1 cut(s) 102
Hpy188I TCNGA 3 cut(s) 298, 474, 1101
Hpy188III TCNNGA 4 cut(s) 464, 930, 990, 1131
Hpy99I CGWCG 1 cut(s) 217
HpyAV CCTTC 2 cut(s) 820, 936
HpyCH4III ACNGT 1 cut(s) 1128
HpyCH4IV ACGT 1 cut(s) 802
HpyF10VI GCNNNNNNNGC 9 cut(s) 76, 259, 268, 394, 866, 887, 896, 956, 1007
HpyF3I CTNAG 5 cut(s) 227, 249, 276, 351, 530
HpySE526I ACGT 1 cut(s) 802
Hsp92I GRCGYC 1 cut(s) 40
Hsp92II CATG 7 cut(s) 124, 170, 257, 275, 616, 637, 1160
HspAI GCGC 1 cut(s) 479
Kzo9I GATC 7 cut(s) 304, 466, 920, 982, 995, 1027, 1096
LmnI GCTCC 8 cut(s) 145, 235, 245, 284, 318, 382, 1040, 1085
Lsp1109I GCAGC 9 cut(s) 234, 246, 372, 400, 463, 505, 742, 868, 871
LweI GCATC 4 cut(s) 165, 946, 997, 1111
MaeI CTAG 1 cut(s) 639
MaeII ACGT 1 cut(s) 802
MaeIII GTNAC 1 cut(s) 628
MalI GATC 7 cut(s) 306, 468, 922, 984, 997, 1029, 1098
MboI GATC 7 cut(s) 304, 466, 920, 982, 995, 1027, 1096
MboII GAAGA 4 cut(s) 461, 631, 705, 788
MflI RGATCY 3 cut(s) 466, 920, 995
MhlI GDGCHC 2 cut(s) 86, 250
MluCI AATT 2 cut(s) 578, 676
MlyI GAGTC 2 cut(s) 377, 469
MmeI TCCRAC 2 cut(s) 276, 1124
MroXI GAANNNNTTC 1 cut(s) 603
MseI TTAA 3 cut(s) 375, 444, 1113
MvaI CCWGG 8 cut(s) 72, 323, 723, 797, 849, 939, 1065, 1151
MwoI GCNNNNNNNGC 9 cut(s) 76, 259, 268, 394, 866, 887, 896, 956, 1007
NciI CCSGG 5 cut(s) 51, 81, 99, 1105, 1106
NcoI CCATGG 1 cut(s) 633
NdeII GATC 7 cut(s) 304, 466, 920, 982, 995, 1027, 1096
NlaIII CATG 7 cut(s) 124, 170, 257, 275, 616, 637, 1160
NlaIV GGNNCC 8 cut(s) 55, 85, 103, 320, 865, 1087, 1147, 1230
NspI RCATGY 4 cut(s) 124, 170, 275, 1160
PaeI GCATGC 1 cut(s) 275
PaeR7I CTCGAG 2 cut(s) 1206, 1239
PaqCI CACCTGC 1 cut(s) 382
PasI CCCWGGG 2 cut(s) 796, 1150
PciI ACATGT 2 cut(s) 120, 1156
PdmI GAANNNNTTC 1 cut(s) 603
PfeI GAWTC 4 cut(s) 18, 499, 599, 718
PflMI CCANNNNNTGG 1 cut(s) 205
PfoI TCCNGGA 3 cut(s) 49, 721, 937
PleI GAGTC 2 cut(s) 376, 468
PpsI GAGTC 2 cut(s) 376, 468
PscI ACATGT 2 cut(s) 120, 1156
Psp124BI GAGCTC 1 cut(s) 250
Psp6I CCWGG 8 cut(s) 70, 321, 721, 795, 847, 937, 1063, 1149
PspGI CCWGG 8 cut(s) 70, 321, 721, 795, 847, 937, 1063, 1149
PspN4I GGNNCC 8 cut(s) 55, 85, 103, 320, 865, 1087, 1147, 1230
PspPI GGNCC 9 cut(s) 28, 53, 68, 77, 845, 932, 945, 968, 1145
PspXI VCTCGAGB 2 cut(s) 1206, 1239
PstI CTGCAG 3 cut(s) 264, 390, 760
PstNI CAGNNNCTG 5 cut(s) 154, 184, 205, 238, 268
PsuI RGATCY 3 cut(s) 466, 920, 995
RsaI GTAC 2 cut(s) 584, 1056
RsaNI GTAC 2 cut(s) 583, 1055
SacI GAGCTC 1 cut(s) 250
SaqAI TTAA 3 cut(s) 375, 444, 1113
Sau3AI GATC 7 cut(s) 304, 466, 920, 982, 995, 1027, 1096
Sau96I GGNCC 9 cut(s) 28, 53, 68, 77, 845, 932, 945, 968, 1145
SchI GAGTC 2 cut(s) 377, 469
SduI GDGCHC 2 cut(s) 86, 250
SfaNI GCATC 4 cut(s) 165, 946, 997, 1111
SfcI CTRYAG 3 cut(s) 260, 386, 756
SfiI GGCCNNNNNGGCC 1 cut(s) 76
Sfr274I CTCGAG 2 cut(s) 1206, 1239
SinI GGWCC 4 cut(s) 53, 932, 945, 1145
SlaI CTCGAG 2 cut(s) 1206, 1239
SmaI CCCGGG 1 cut(s) 1106
SmlI CTYRAG 2 cut(s) 1206, 1239
SmoI CTYRAG 2 cut(s) 1206, 1239
SphI GCATGC 1 cut(s) 275
Sse9I AATT 2 cut(s) 578, 676
SsiI CCGC 8 cut(s) 88, 362, 365, 867, 876, 888, 948, 1232
SspMI CTAG 1 cut(s) 639
SstI GAGCTC 1 cut(s) 250
StyI CCWWGG 1 cut(s) 633
TaaI ACNGT 1 cut(s) 1128
TaiI ACGT 1 cut(s) 805
TaqI TCGA 5 cut(s) 16, 212, 522, 1207, 1240
TasI AATT 2 cut(s) 578, 676
TatI WGTACW 2 cut(s) 582, 1054
TauI GCSGC 3 cut(s) 365, 869, 890
TfiI GAWTC 4 cut(s) 18, 499, 599, 718
Tru1I TTAA 3 cut(s) 375, 444, 1113
Tru9I TTAA 3 cut(s) 375, 444, 1113
TscAI CASTG 1 cut(s) 862
TseI GCWGC 9 cut(s) 222, 259, 385, 388, 451, 493, 755, 881, 884
TspDTI ATGAA 4 cut(s) 305, 585, 747, 789
TspGWI ACGGA 1 cut(s) 900
TspMI CCCGGG 1 cut(s) 1104
TspRI CASTG 1 cut(s) 862
Van91I CCANNNNNTGG 1 cut(s) 205
VpaK11BI GGWCC 4 cut(s) 53, 932, 945, 1145
XagI CCTNNNNNAGG 3 cut(s) 230, 533, 1242
XceI RCATGY 4 cut(s) 124, 170, 275, 1160
XhoI CTCGAG 2 cut(s) 1206, 1239
XmaI CCCGGG 1 cut(s) 1104
XmnI GAANNNNTTC 1 cut(s) 603
XspI CTAG 1 cut(s) 639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.