pycom09g02190

GPI-anchored protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
1655739 .. 1656803
1065 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g02190.1

Sequence Viewer

Length: 984 bp
ATGTCATCATTTCTTCCCATCTCCTCTCTCACATTCTTCCTCCTCCTCCTCTTATTAATATCCAGCTTCAACATTTCCTTCGCCGGTCTACTCGCCGAACCTGTGACCGGTAACCCGCAGCCGCTCAAACCGGGGGAAAACTCCACTCCCAACACTGTCCCCGCCTTCCCAACCCAGAACCCGACCCAGACCTGCCACCTTGACCTCTCCGCTGAGCTCTTCGGCGGCGTCAGCCAAGCATGCGGCCGAAACCTCGACCGGAGCCGATGCTGCCCCGTTCTAGCCGCCTGGCTCTTCGCCGCCCACGCCAGATCAGCCCTTGAGCTCCCCTCCTCGGCTCCGGATCAGTCGGCGGTGCCCGACCAACCGATGATGCCGGACGACTCGCAGAAGTGCGTCAACTCGCTGCAGTCTTCGCTCGTCAGTCGGAACATCCGGATTCCTCAACCCAACGCCAGCTGCGACGCCGTTCTGTGCTTCTGCGGAATCCGGCTCCACCAGATCGGATCCCTCAGCTGCCCCGCCGCCTTCAACGTGTCGCAAGGGTTCCACAACGCCACCCCCACCGCCGCCCTCAGGAATCTCGAGAAGAACTGCCGCAACTCTTCGTACTCCGGCTGCACCAAGTGCCTTGGCGCTGTCCAGAAGCTCAAGGGAGGGAGCAAGAACGGAACGGCGGGGGACAGGAGCACGAGCGAGAGAGCGAACAAGATGTTCAACCGTGACTGCCAGCTCATGGGGCTGACGTGGCTCCTCGCCCGGAACAAAACGGCGTACATTCCGACCGTTTCCGCCGTGCTGCGCGCCATAATGTACAGTGCGCACCCGCCGCACGAGAACATGTGTAGCCCGGACCAGGAGAACATGCCGCTTGCCGTCGATTCGCTGCAGATCGAGAAGGGGCAAGGGTTTGCCGCATCATTGCCGTCCATTTTGTTGTTTCCGATTCTGCCCCTGATCATTTGGGCGTCTCTGTTTGTCTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

328

Amino Acids

35.09

Weight (kDa)

8.39

Isoelectric Point (pI)

58.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011246)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 822
Acc36I ACCTGC 1 cut(s) 200
AccB1I GGYRCC 1 cut(s) 355
AccB7I CCANNNNNTGG 1 cut(s) 736
AccBSI CCGCTC 1 cut(s) 124
AccI GTMKAC 1 cut(s) 88
AccII CGCG 1 cut(s) 804
AccIII TCCGGA 2 cut(s) 340, 435
AclWI GGATC 3 cut(s) 351, 501, 514
AcoI YGGCCR 1 cut(s) 244
AcyI GRCGYC 3 cut(s) 228, 465, 968
AdeI CACNNNGTG 1 cut(s) 627
AfaI GTAC 3 cut(s) 611, 776, 815
AfiI CCNNNNNNNGG 5 cut(s) 107, 334, 576, 736, 856
AflIII ACRYGT 2 cut(s) 534, 840
AgeI ACCGGT 1 cut(s) 107
AgsI TTSAA 3 cut(s) 70, 532, 718
AjiI CACGTC 1 cut(s) 747
AjnI CCWGG 2 cut(s) 287, 855
AluBI AGCT 7 cut(s) 66, 217, 325, 459, 516, 649, 733
AluI AGCT 7 cut(s) 66, 217, 325, 459, 516, 649, 733
Alw21I GWGCWC 3 cut(s) 219, 327, 692
Alw26I GTCTC 1 cut(s) 975
AlwI GGATC 3 cut(s) 351, 501, 514
Ama87I CYCGRG 1 cut(s) 584
Aor13HI TCCGGA 2 cut(s) 340, 435
AoxI GGCC 1 cut(s) 244
ApeKI GCWGC 8 cut(s) 118, 270, 406, 459, 516, 618, 799, 886
AseI ATTAAT 1 cut(s) 56
AsiGI ACCGGT 1 cut(s) 107
AspLEI GCGC 4 cut(s) 638, 804, 806, 823
AspS9I GGNCC 1 cut(s) 853
AsuC2I CCSGG 3 cut(s) 132, 760, 851
AvaI CYCGRG 1 cut(s) 584
AvaII GGWCC 1 cut(s) 853
AxyI CCTNAGG 1 cut(s) 575
BaeGI GKGCMC 1 cut(s) 360
BamHI GGATCC 1 cut(s) 506
BanI GGYRCC 1 cut(s) 355
BanII GRGCYC 2 cut(s) 219, 327
BauI CACGAG 2 cut(s) 691, 833
BbsI GAAGAC 1 cut(s) 405
Bbv12I GWGCWC 3 cut(s) 219, 327, 692
BbvCI CCTCAGC 1 cut(s) 512
BbvI GCAGC 8 cut(s) 130, 257, 393, 446, 503, 605, 786, 873
BccI CCATC 1 cut(s) 26
BceAI ACGGC 6 cut(s) 452, 690, 779, 786, 860, 910
BciT130I CCWGG 2 cut(s) 289, 857
BclI TGATCA 1 cut(s) 957
BcnI CCSGG 3 cut(s) 132, 760, 851
BcoDI GTCTC 1 cut(s) 975
BfaI CTAG 1 cut(s) 281
BfmI CTRYAG 2 cut(s) 407, 887
BfoI RGCGCY 1 cut(s) 639
BfuAI ACCTGC 1 cut(s) 200
BlpI GCTNAGC 1 cut(s) 213
Bme1390I CCNGG 5 cut(s) 132, 289, 760, 851, 857
Bme18I GGWCC 1 cut(s) 853
BmeT110I CYCGRG 1 cut(s) 584
BmgBI CACGTC 1 cut(s) 747
BmgT120I GGNCC 1 cut(s) 853
BmiI GGNNCC 7 cut(s) 263, 339, 357, 494, 508, 548, 752
BmrFI CCNGG 5 cut(s) 132, 289, 760, 851, 857
BmsI GCATC 3 cut(s) 257, 363, 926
BpiI GAAGAC 1 cut(s) 405
BplI GAGNNNNNCTC 2 cut(s) 314, 346
Bpu10I CCTNAGC 1 cut(s) 512
Bpu1102I GCTNAGC 1 cut(s) 213
BpuEI CTTGAG 2 cut(s) 341, 635
BpuMI CCSGG 3 cut(s) 132, 760, 851
BsaHI GRCGYC 3 cut(s) 228, 465, 968
BsaJI CCNNGG 3 cut(s) 131, 333, 631
BsaWI WCCGGW 4 cut(s) 107, 258, 340, 435
Bsc4I CCNNNNNNNGG 5 cut(s) 107, 334, 576, 736, 856
Bse118I RCCGGY 2 cut(s) 83, 107
Bse21I CCTNAGG 1 cut(s) 575
Bse3DI GCAATG 1 cut(s) 920
BseAI TCCGGA 2 cut(s) 340, 435
BseBI CCWGG 2 cut(s) 289, 857
BseDI CCNNGG 3 cut(s) 131, 333, 631
BseGI GGATG 1 cut(s) 432
BseLI CCNNNNNNNGG 5 cut(s) 107, 334, 576, 736, 856
BseMI GCAATG 1 cut(s) 920
BseMII CTCAG 3 cut(s) 204, 526, 589
BsePI GCGCGC 1 cut(s) 802
BseRI GAGGAG 6 cut(s) 13, 32, 35, 38, 322, 743
BseSI GKGCMC 1 cut(s) 360
BseX3I CGGCCG 1 cut(s) 244
BseXI GCAGC 8 cut(s) 130, 257, 393, 446, 503, 605, 786, 873
BsgI GTGCAG 1 cut(s) 604
Bsh1236I CGCG 1 cut(s) 804
Bsh1285I CGRYCG 3 cut(s) 247, 259, 786
BshFI GGCC 1 cut(s) 246
BshNI GGYRCC 1 cut(s) 355
BshTI ACCGGT 1 cut(s) 107
BsiEI CGRYCG 3 cut(s) 247, 259, 786
BsiHKAI GWGCWC 3 cut(s) 219, 327, 692
BsiHKCI CYCGRG 1 cut(s) 584
BslFI GGGAC 2 cut(s) 143, 695
BslI CCNNNNNNNGG 5 cut(s) 107, 334, 576, 736, 856
BsmAI GTCTC 1 cut(s) 975
BsmBI CGTCTC 1 cut(s) 975
BsmFI GGGAC 2 cut(s) 143, 695
BsnI GGCC 1 cut(s) 246
BsoBI CYCGRG 1 cut(s) 584
Bsp1286I GDGCHC 4 cut(s) 219, 327, 360, 692
Bsp13I TCCGGA 2 cut(s) 340, 435
Bsp1407I TGTACA 1 cut(s) 813
Bsp143I GATC 6 cut(s) 311, 343, 501, 506, 891, 957
Bsp1720I GCTNAGC 1 cut(s) 213
BspANI GGCC 1 cut(s) 246
BspCNI CTCAG 3 cut(s) 205, 525, 588
BspEI TCCGGA 2 cut(s) 340, 435
BspFNI CGCG 1 cut(s) 804
BspLI GGNNCC 7 cut(s) 263, 339, 357, 494, 508, 548, 752
BspMAI CTGCAG 2 cut(s) 411, 891
BspMI ACCTGC 1 cut(s) 200
BspPI GGATC 3 cut(s) 351, 501, 514
BspQI GCTCTTC 2 cut(s) 224, 299
BspT107I GGYRCC 1 cut(s) 355
BsrBI CCGCTC 1 cut(s) 124
BsrDI GCAATG 1 cut(s) 920
BsrFI RCCGGY 2 cut(s) 83, 107
BsrGI TGTACA 1 cut(s) 813
BssAI RCCGGY 2 cut(s) 83, 107
BssECI CCNNGG 3 cut(s) 131, 333, 631
BssHII GCGCGC 1 cut(s) 802
BssMI GATC 6 cut(s) 311, 343, 501, 506, 891, 957
BssNI GRCGYC 3 cut(s) 228, 465, 968
BssSI CACGAG 2 cut(s) 691, 833
BssT1I CCWWGG 1 cut(s) 631
Bst2BI CACGAG 2 cut(s) 691, 833
Bst2UI CCWGG 2 cut(s) 289, 857
Bst4CI ACNGT 4 cut(s) 157, 722, 787, 818
Bst6I CTCTTC 3 cut(s) 224, 299, 610
BstACI GRCGYC 3 cut(s) 228, 465, 968
BstAPI GCANNNNNTGC 1 cut(s) 627
BstAUI TGTACA 1 cut(s) 813
BstC8I GCNNGC 5 cut(s) 241, 457, 731, 804, 873
BstDEI CTNAG 3 cut(s) 213, 512, 575
BstEII GGTNACC 1 cut(s) 110
BstF5I GGATG 1 cut(s) 432
BstFNI CGCG 1 cut(s) 804
BstH2I RGCGCY 1 cut(s) 639
BstHHI GCGC 4 cut(s) 638, 804, 806, 823
BstKTI GATC 6 cut(s) 314, 346, 504, 509, 894, 960
BstMAI GTCTC 1 cut(s) 975
BstMBI GATC 6 cut(s) 311, 343, 501, 506, 891, 957
BstMCI CGRYCG 3 cut(s) 247, 259, 786
BstNI CCWGG 2 cut(s) 289, 857
BstNSI RCATGY 3 cut(s) 243, 844, 868
BstPI GGTNACC 1 cut(s) 110
BstSCI CCNGG 5 cut(s) 130, 287, 758, 849, 855
BstSFI CTRYAG 2 cut(s) 407, 887
BstSLI GKGCMC 1 cut(s) 360
BstUI CGCG 1 cut(s) 804
BstV1I GCAGC 8 cut(s) 130, 257, 393, 446, 503, 605, 786, 873
BstV2I GAAGAC 1 cut(s) 405
BstX2I RGATCY 1 cut(s) 506
BstYI RGATCY 1 cut(s) 506
BstZI CGGCCG 1 cut(s) 244
Bsu36I CCTNAGG 1 cut(s) 575
BsuRI GGCC 1 cut(s) 246
BtrI CACGTC 1 cut(s) 747
BtsCI GGATG 1 cut(s) 432
BtsIMutI CAGTG 2 cut(s) 153, 823
BveI ACCTGC 1 cut(s) 200
Cac8I GCNNGC 5 cut(s) 241, 457, 731, 804, 873
CfoI GCGC 4 cut(s) 638, 804, 806, 823
Cfr10I RCCGGY 2 cut(s) 83, 107
Cfr13I GGNCC 1 cut(s) 853
CseI GACGC 4 cut(s) 217, 385, 473, 957
Csp6I GTAC 3 cut(s) 610, 775, 814
CspAI ACCGGT 1 cut(s) 107
CviAII CATG 4 cut(s) 240, 736, 841, 865
CviQI GTAC 3 cut(s) 610, 775, 814
DdeI CTNAG 3 cut(s) 213, 512, 575
DpnI GATC 6 cut(s) 313, 345, 503, 508, 893, 959
DpnII GATC 6 cut(s) 311, 343, 501, 506, 891, 957
DraIII CACNNNGTG 1 cut(s) 627
EaeI YGGCCR 1 cut(s) 244
EagI CGGCCG 1 cut(s) 244
Eam1104I CTCTTC 3 cut(s) 224, 299, 610
EarI CTCTTC 3 cut(s) 224, 299, 610
EciI GGCGGA 1 cut(s) 781
Ecl136II GAGCTC 2 cut(s) 217, 325
EclXI CGGCCG 1 cut(s) 244
Eco130I CCWWGG 1 cut(s) 631
Eco24I GRGCYC 2 cut(s) 219, 327
Eco47I GGWCC 1 cut(s) 853
Eco52I CGGCCG 1 cut(s) 244
Eco53kI GAGCTC 2 cut(s) 217, 325
Eco81I CCTNAGG 1 cut(s) 575
Eco88I CYCGRG 1 cut(s) 584
Eco91I GGTNACC 1 cut(s) 110
EcoICRI GAGCTC 2 cut(s) 217, 325
EcoO65I GGTNACC 1 cut(s) 110
EcoRII CCWGG 2 cut(s) 287, 855
EcoT14I CCWWGG 1 cut(s) 631
EcoT38I GRGCYC 2 cut(s) 219, 327
ErhI CCWWGG 1 cut(s) 631
Esp3I CGTCTC 1 cut(s) 975
FaeI CATG 4 cut(s) 243, 739, 844, 868
FaiI YATR 5 cut(s) 241, 737, 809, 842, 866
FaqI GGGAC 2 cut(s) 143, 695
FatI CATG 4 cut(s) 239, 735, 840, 864
FauI CCCGC 5 cut(s) 123, 169, 529, 670, 834
FbaI TGATCA 1 cut(s) 957
FblI GTMKAC 1 cut(s) 88
FokI GGATG 1 cut(s) 419
FriOI GRGCYC 2 cut(s) 219, 327
FspAI RTGCGCAY 1 cut(s) 822
FspBI CTAG 1 cut(s) 281
FspI TGCGCA 1 cut(s) 822
GlaI GCGC 4 cut(s) 637, 803, 805, 822
HaeII RGCGCY 1 cut(s) 639
HaeIII GGCC 1 cut(s) 246
HgaI GACGC 4 cut(s) 217, 385, 473, 957
HhaI GCGC 4 cut(s) 638, 804, 806, 823
Hin1I GRCGYC 3 cut(s) 228, 465, 968
Hin1II CATG 4 cut(s) 243, 739, 844, 868
Hin6I GCGC 4 cut(s) 636, 802, 804, 821
HinP1I GCGC 4 cut(s) 636, 802, 804, 821
HincII GTYRAC 1 cut(s) 400
HindII GTYRAC 1 cut(s) 400
HinfI GANTC 6 cut(s) 383, 439, 486, 580, 881, 946
Hpy166II GTNNAC 2 cut(s) 89, 400
Hpy188I TCNGA 4 cut(s) 429, 506, 783, 945
Hpy188III TCNNGA 7 cut(s) 341, 436, 577, 584, 586, 643, 895
Hpy8I GTNNAC 2 cut(s) 89, 400
Hpy99I CGWCG 2 cut(s) 467, 881
HpyAV CCTTC 4 cut(s) 88, 175, 538, 892
HpyCH4III ACNGT 4 cut(s) 157, 722, 787, 818
HpyCH4IV ACGT 2 cut(s) 534, 746
HpyCH4V TGCA 3 cut(s) 409, 621, 889
HpyF3I CTNAG 3 cut(s) 213, 512, 575
HpySE526I ACGT 2 cut(s) 534, 746
Hsp92I GRCGYC 3 cut(s) 228, 465, 968
Hsp92II CATG 4 cut(s) 243, 739, 844, 868
HspAI GCGC 4 cut(s) 636, 802, 804, 821
Kpn2I TCCGGA 2 cut(s) 340, 435
Ksp22I TGATCA 1 cut(s) 957
Kzo9I GATC 6 cut(s) 311, 343, 501, 506, 891, 957
LguI GCTCTTC 2 cut(s) 224, 299
LmnI GCTCC 7 cut(s) 261, 330, 343, 498, 660, 687, 756
Lsp1109I GCAGC 8 cut(s) 130, 257, 393, 446, 503, 605, 786, 873
LweI GCATC 3 cut(s) 257, 363, 926
MaeI CTAG 1 cut(s) 281
MaeII ACGT 2 cut(s) 534, 746
MaeIII GTNAC 3 cut(s) 103, 110, 722
MalI GATC 6 cut(s) 313, 345, 503, 508, 893, 959
MbiI CCGCTC 1 cut(s) 124
MboI GATC 6 cut(s) 311, 343, 501, 506, 891, 957
MboII GAAGA 7 cut(s) 5, 28, 211, 286, 405, 597, 601
MflI RGATCY 1 cut(s) 506
MhlI GDGCHC 4 cut(s) 219, 327, 360, 692
MlyI GAGTC 1 cut(s) 377
MmeI TCCRAC 2 cut(s) 407, 806
MroI TCCGGA 2 cut(s) 340, 435
MseI TTAA 1 cut(s) 56
MspA1I CMGCKG 3 cut(s) 212, 459, 516
MspR9I CCNGG 5 cut(s) 132, 289, 760, 851, 857
MvaI CCWGG 2 cut(s) 289, 857
MvnI CGCG 1 cut(s) 804
NciI CCSGG 3 cut(s) 132, 760, 851
NdeII GATC 6 cut(s) 311, 343, 501, 506, 891, 957
NlaIII CATG 4 cut(s) 243, 739, 844, 868
NlaIV GGNNCC 7 cut(s) 263, 339, 357, 494, 508, 548, 752
NmeAIII GCCGAG 1 cut(s) 314
NmuCI GTSAC 2 cut(s) 103, 722
NsbI TGCGCA 1 cut(s) 822
NspI RCATGY 3 cut(s) 243, 844, 868
PaeI GCATGC 1 cut(s) 243
PaeR7I CTCGAG 1 cut(s) 584
PauI GCGCGC 1 cut(s) 802
PciI ACATGT 1 cut(s) 840
PciSI GCTCTTC 2 cut(s) 224, 299
PcsI WCGNNNNNNNCGW 1 cut(s) 459
PfeI GAWTC 5 cut(s) 439, 486, 580, 881, 946
PflMI CCANNNNNTGG 1 cut(s) 736
PinAI ACCGGT 1 cut(s) 107
PleI GAGTC 1 cut(s) 377
PpsI GAGTC 1 cut(s) 377
PscI ACATGT 1 cut(s) 840
PshBI ATTAAT 1 cut(s) 56
Psp124BI GAGCTC 2 cut(s) 219, 327
Psp6I CCWGG 2 cut(s) 287, 855
PspEI GGTNACC 1 cut(s) 110
PspGI CCWGG 2 cut(s) 287, 855
PspN4I GGNNCC 7 cut(s) 263, 339, 357, 494, 508, 548, 752
PspPI GGNCC 1 cut(s) 853
PstI CTGCAG 2 cut(s) 411, 891
PsuI RGATCY 1 cut(s) 506
PteI GCGCGC 1 cut(s) 802
PvuII CAGCTG 2 cut(s) 459, 516
RsaI GTAC 3 cut(s) 611, 776, 815
RsaNI GTAC 3 cut(s) 610, 775, 814
SacI GAGCTC 2 cut(s) 219, 327
SapI GCTCTTC 2 cut(s) 224, 299
SaqAI TTAA 1 cut(s) 56
Sau3AI GATC 6 cut(s) 311, 343, 501, 506, 891, 957
Sau96I GGNCC 1 cut(s) 853
SchI GAGTC 1 cut(s) 377
ScrFI CCNGG 5 cut(s) 132, 289, 760, 851, 857
SduI GDGCHC 4 cut(s) 219, 327, 360, 692
SfaNI GCATC 3 cut(s) 257, 363, 926
SfcI CTRYAG 2 cut(s) 407, 887
Sfr274I CTCGAG 1 cut(s) 584
SinI GGWCC 1 cut(s) 853
SlaI CTCGAG 1 cut(s) 584
SmlI CTYRAG 3 cut(s) 320, 584, 650
SmoI CTYRAG 3 cut(s) 320, 584, 650
SphI GCATGC 1 cut(s) 243
SspMI CTAG 1 cut(s) 281
SstI GAGCTC 2 cut(s) 219, 327
StyD4I CCNGG 5 cut(s) 130, 287, 758, 849, 855
StyI CCWWGG 1 cut(s) 631
TaaI ACNGT 4 cut(s) 157, 722, 787, 818
TaiI ACGT 2 cut(s) 537, 749
TaqI TCGA 4 cut(s) 255, 585, 879, 894
TatI WGTACW 1 cut(s) 813
TfiI GAWTC 5 cut(s) 439, 486, 580, 881, 946
Tru1I TTAA 1 cut(s) 56
Tru9I TTAA 1 cut(s) 56
TscAI CASTG 2 cut(s) 160, 823
TseFI GTSAC 2 cut(s) 103, 722
TseI GCWGC 8 cut(s) 118, 270, 406, 459, 516, 618, 799, 886
Tsp45I GTSAC 2 cut(s) 103, 722
TspGWI ACGGA 1 cut(s) 684
TspRI CASTG 2 cut(s) 160, 823
Van91I CCANNNNNTGG 1 cut(s) 736
VpaK11BI GGWCC 1 cut(s) 853
VspI ATTAAT 1 cut(s) 56
XceI RCATGY 3 cut(s) 243, 844, 868
XhoI CTCGAG 1 cut(s) 584
XmiI GTMKAC 1 cut(s) 88
XspI CTAG 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.