pycom09g17670

Pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0014786
Physical Location & Seq
Forward (+)
18196867 .. 18198501
1635 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1482 bp
ATGACCAGAACCAGCAAAAAACGACGCCATGGCTACCCACCTCCCAACAATCCCTCTTCTGCCAACCCAATTCACCATAAACGCCAACCCGCCAAGAAGCTGCATTCTTCCTCCACCCCAACTCACAGAATCCCCAATTCCCCAACCCCAATTCACAAAACGCTCAATTCTTCAGCCGTAGCTCTGTTGCCGGCGAACCCACGCACCCAAACCCTAGTAGCAAACCGCCCAACCTTCGCCTCGTACCTCGACACTCCGAATCTGCCTCCGAAAATCGGACTTCTCTGCGAAATATTGGCCAAAACCCACACCCCTTCTGTTGAGGAACGGTTGGAGGAGACCGGTGTTAGAGTGACCCAAGAAGATGTTGAAGAGGTGCTCAAACTGTCCTACGGGTTCCCGGGCCCGTCAGTGAAGTTTTTCCGGTGGGCCGGTCGCCAGCTCAATGACTTTCACAGCCCCTATGCTTGGAACTTGGTTGTTGATCTTTTGGGCAAGAATTGCTTCTTTGATGCAATGTGGGATGCCATCAGTGCCATGGCGAAAGAAAGAGATGGCAAGACCGCTGATGCCGTTGAGTTTTTGCGTGTTGCCAAGGTTGAGATTAGGCCGGACCCTGACACCTATGCCATTTTGTTGGAGGGTTTCGAAAATGAAGGCAACGTGGATTGTGCTAGGCAGGTCTTTTCTGAGATGGTGATTGAAATTGGTTGGGACCCCAACAATGTTCCAGCTTATGATTCATTCTTGAATACTTTGCTTAAGGGACCTGATGGGATCCGTGAGGCAGTGAAGGTCTTTGAGACCTTAAAAAATAGGAGGTGTTATCCGGGGATCAGTTTTTTCAGGCTTGCACTGGATGAGTGTGTCAAGAAGTGCGATTCTAGGGGAGCGGACACTCTCTGGCAGGCAATGGTAGGGAGAATTGGATGCCAACCTGATACGAGTATGTATAATTTGGTGATTTCTTTACATTGTCGTGATGGCAATGGTGATTTAGCACGAAAGATGTTCGATGAGATGGTGTACAAGGGGGCATTCCCGAATGCACAAACATATAACATGGTTTTTAAGCTTTTAATCAAGGATAGGAAGTTAAGGGAGGCTTCGGCATTGTTTACAGAGATGGTTAAAAATGAGTGTGTTCCAGAGCTTGCTAATTGTGACATAGCAGTAAGGATTTTCCTGGATTTTGGGGACCCTTACTTTGCTATAAAAGTTTGGAAGTGCATGATAGAGAATTACCATTCTGGCTTGGAGGATACAGGGAATTTGTTGGTTGTAGGGCTCCGCGATTTGAATAGGATCCCAGAAGCTGTTAAGTACGCGGAGGATATGATTGCAAGAGGAATGAAGTTGGACTTTTCGACATTGTCAAAACTGAAACAGGACCTCTTACGAGCAAGGAAGGAATACGTGTACGATGAGCTTTTGAGAAAGTGGAAAGCTCGACAGGTAGGTTCGAAATACTTAGAATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

494

Amino Acids

55.93

Weight (kDa)

8.6

Isoelectric Point (pI)

37.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 282 - 407 3.2e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 308 - 359 1e-05 Pentatricopeptide repeat domain
PPR_1 PF12854 310 - 342 8.8e-08 PPR repeat
PPR_2 PF13041 313 - 360 2.1e-12 PPR repeat family
PPR PF01535 317 - 345 6.2e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014786)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g03480
malus_domestica MD09G1262300.v1.1
prunus_persica Prupe.3G160100_v2.0.a1
pyrus_communis pycom09g17670
rosa_chinensis RchiOBHm_Chr3g0493431
rosa_laevigata RLG00000022714
rosa_multiflora Rmu_co8321897.1_g000001 Rmu_sc0003935.1_g000001 Rmu_sc0019660.1_g000001
rosa_roxburghii Rroxscaffold_6G00391590
rosa_rugosa Rorug03G0261000
rosa_samantha Rh3AG310100 Rh3BG346200 Rh3CG343800 Rh3DG345200
rosa_wichuraiana Rw0G011150 Rw3G027240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 670
AccBSI CCGCTC 1 cut(s) 893
AccII CGCG 2 cut(s) 1293, 1328
AciI CCGC 6 cut(s) 90, 226, 564, 893, 1291, 1328
AclWI GGATC 5 cut(s) 772, 785, 842, 1300, 1313
AcoI YGGCCR 1 cut(s) 297
AcsI RAATTY 1 cut(s) 1270
AcuI CTGAAG 1 cut(s) 156
AcyI GRCGYC 1 cut(s) 25
AfaI GTAC 4 cut(s) 245, 1028, 1325, 1421
AfiI CCNNNNNNNGG 2 cut(s) 275, 468
AflII CTTAAG 1 cut(s) 761
AflIII ACRYGT 1 cut(s) 1416
AgeI ACCGGT 1 cut(s) 341
AgsI TTSAA 4 cut(s) 371, 704, 751, 1300
AjnI CCWGG 1 cut(s) 1185
AluBI AGCT 9 cut(s) 100, 182, 442, 734, 1075, 1153, 1316, 1429, 1448
AluI AGCT 9 cut(s) 100, 182, 442, 734, 1075, 1153, 1316, 1429, 1448
Alw21I GWGCWC 1 cut(s) 381
Alw26I GTCTC 2 cut(s) 332, 797
AlwI GGATC 5 cut(s) 772, 785, 842, 1300, 1313
AlwNI CAGNNNCTG 1 cut(s) 1316
Ama87I CYCGRG 1 cut(s) 400
AoxI GGCC 4 cut(s) 297, 403, 429, 608
ApaI GGGCCC 1 cut(s) 407
ApeKI GCWGC 1 cut(s) 100
ApoI RAATTY 1 cut(s) 1270
ArsI GACNNNNNNTTYG 2 cut(s) 1190, 1222
AsiGI ACCGGT 1 cut(s) 341
Asp700I GAANNNNTTC 2 cut(s) 419, 503
AspS9I GGNCC 8 cut(s) 403, 404, 429, 613, 715, 767, 1198, 1390
AsuC2I CCSGG 3 cut(s) 401, 402, 831
AsuHPI GGTGA 4 cut(s) 65, 709, 973, 1004
AsuII TTCGAA 2 cut(s) 648, 1463
AvaI CYCGRG 1 cut(s) 400
AvaII GGWCC 5 cut(s) 613, 715, 767, 1198, 1390
BaeGI GKGCMC 1 cut(s) 407
BalI TGGCCA 1 cut(s) 299
BamHI GGATCC 2 cut(s) 777, 1305
BanII GRGCYC 2 cut(s) 407, 1290
Bbv12I GWGCWC 1 cut(s) 381
BbvI GCAGC 1 cut(s) 87
BccI CCATC 7 cut(s) 536, 548, 688, 767, 977, 1015, 1120
BceAI ACGGC 2 cut(s) 161, 557
BciT130I CCWGG 1 cut(s) 1187
BciVI GTATCC 1 cut(s) 1255
BcnI CCSGG 3 cut(s) 401, 402, 831
BcoDI GTCTC 2 cut(s) 332, 797
BfaI CTAG 3 cut(s) 215, 675, 885
BfrI CTTAAG 1 cut(s) 761
BfuAI ACCTGC 1 cut(s) 670
BfuI GTATCC 1 cut(s) 1255
BisI GCNGC 1 cut(s) 101
BlsI GCNGC 1 cut(s) 102
Bme1390I CCNGG 4 cut(s) 401, 402, 831, 1187
Bme18I GGWCC 5 cut(s) 613, 715, 767, 1198, 1390
BmeT110I CYCGRG 1 cut(s) 400
BmgT120I GGNCC 8 cut(s) 403, 404, 429, 613, 715, 767, 1198, 1390
BmrFI CCNGG 4 cut(s) 401, 402, 831, 1187
BmsI GCATC 4 cut(s) 502, 514, 559, 920
Bpu14I TTCGAA 2 cut(s) 648, 1463
BpuMI CCSGG 3 cut(s) 401, 402, 831
BsaAI YACGTR 1 cut(s) 1417
BsaHI GRCGYC 1 cut(s) 25
BsaI GGTCTC 2 cut(s) 332, 797
BsaJI CCNNGG 5 cut(s) 28, 400, 537, 594, 830
BsaWI WCCGGW 2 cut(s) 341, 423
Bsc4I CCNNNNNNNGG 2 cut(s) 275, 468
Bse118I RCCGGY 3 cut(s) 190, 341, 431
Bse1I ACTGG 1 cut(s) 861
Bse3DI GCAATG 3 cut(s) 522, 918, 994
BseBI CCWGG 1 cut(s) 1187
BseDI CCNNGG 5 cut(s) 28, 400, 537, 594, 830
BseGI GGATG 3 cut(s) 529, 865, 935
BseLI CCNNNNNNNGG 2 cut(s) 275, 468
BseMI GCAATG 3 cut(s) 522, 918, 994
BseMII CTCAG 1 cut(s) 681
BseNI ACTGG 1 cut(s) 861
BseRI GAGGAG 1 cut(s) 350
BseSI GKGCMC 1 cut(s) 407
BseXI GCAGC 1 cut(s) 87
Bsh1236I CGCG 2 cut(s) 1293, 1328
Bsh1285I CGRYCG 1 cut(s) 436
BshFI GGCC 4 cut(s) 299, 405, 431, 610
BshTI ACCGGT 1 cut(s) 341
BsiEI CGRYCG 1 cut(s) 436
BsiHKAI GWGCWC 1 cut(s) 381
BsiHKCI CYCGRG 1 cut(s) 400
BsiSI CCGG 7 cut(s) 191, 342, 401, 424, 432, 611, 830
BslFI GGGAC 3 cut(s) 728, 780, 1211
BslI CCNNNNNNNGG 2 cut(s) 275, 468
BsmAI GTCTC 2 cut(s) 332, 797
BsmFI GGGAC 3 cut(s) 728, 780, 1211
BsmI GAATGC 3 cut(s) 103, 1037, 1051
BsnI GGCC 4 cut(s) 299, 405, 431, 610
Bso31I GGTCTC 2 cut(s) 332, 797
BsoBI CYCGRG 1 cut(s) 400
Bsp119I TTCGAA 2 cut(s) 648, 1463
Bsp120I GGGCCC 1 cut(s) 403
Bsp1286I GDGCHC 3 cut(s) 381, 407, 1290
Bsp1407I TGTACA 1 cut(s) 1026
Bsp143I GATC 4 cut(s) 484, 777, 834, 1305
Bsp19I CCATGG 2 cut(s) 28, 537
BspACI CCGC 6 cut(s) 90, 226, 564, 893, 1291, 1328
BspANI GGCC 4 cut(s) 299, 405, 431, 610
BspCNI CTCAG 1 cut(s) 682
BspFNI CGCG 2 cut(s) 1293, 1328
BspMI ACCTGC 1 cut(s) 670
BspPI GGATC 5 cut(s) 772, 785, 842, 1300, 1313
BspT104I TTCGAA 2 cut(s) 648, 1463
BspTI CTTAAG 1 cut(s) 761
BspTNI GGTCTC 2 cut(s) 332, 797
BsrBI CCGCTC 1 cut(s) 893
BsrDI GCAATG 3 cut(s) 522, 918, 994
BsrFI RCCGGY 3 cut(s) 190, 341, 431
BsrGI TGTACA 1 cut(s) 1026
BsrI ACTGG 1 cut(s) 861
BssAI RCCGGY 3 cut(s) 190, 341, 431
BssECI CCNNGG 5 cut(s) 28, 400, 537, 594, 830
BssMI GATC 4 cut(s) 484, 777, 834, 1305
BssNI GRCGYC 1 cut(s) 25
BssT1I CCWWGG 3 cut(s) 28, 537, 594
Bst2UI CCWGG 1 cut(s) 1187
Bst4CI ACNGT 2 cut(s) 330, 387
Bst6I CTCTTC 2 cut(s) 61, 366
BstACI GRCGYC 1 cut(s) 25
BstAFI CTTAAG 1 cut(s) 761
BstAPI GCANNNNNTGC 1 cut(s) 501
BstAUI TGTACA 1 cut(s) 1026
BstBAI YACGTR 1 cut(s) 1417
BstBI TTCGAA 2 cut(s) 648, 1463
BstC8I GCNNGC 5 cut(s) 192, 440, 852, 909, 1155
BstDEI CTNAG 2 cut(s) 690, 1471
BstDSI CCRYGG 2 cut(s) 28, 537
BstF5I GGATG 3 cut(s) 529, 865, 935
BstFNI CGCG 2 cut(s) 1293, 1328
BstKTI GATC 4 cut(s) 487, 780, 837, 1308
BstMAI GTCTC 2 cut(s) 332, 797
BstMBI GATC 4 cut(s) 484, 777, 834, 1305
BstMCI CGRYCG 1 cut(s) 436
BstMWI GCNNNNNNNGC 2 cut(s) 501, 533
BstNI CCWGG 1 cut(s) 1187
BstSCI CCNGG 4 cut(s) 399, 400, 829, 1185
BstSLI GKGCMC 1 cut(s) 407
BstUI CGCG 2 cut(s) 1293, 1328
BstV1I GCAGC 1 cut(s) 87
BstX2I RGATCY 2 cut(s) 777, 1305
BstXI CCANNNNNNTGG 1 cut(s) 637
BstYI RGATCY 2 cut(s) 777, 1305
BsuI GTATCC 1 cut(s) 1255
BsuRI GGCC 4 cut(s) 299, 405, 431, 610
BtgI CCRYGG 2 cut(s) 28, 537
BtsCI GGATG 3 cut(s) 529, 865, 935
BtsI GCAGTG 1 cut(s) 795
BtsIMutI CAGTG 4 cut(s) 417, 538, 795, 854
BveI ACCTGC 1 cut(s) 670
Cac8I GCNNGC 5 cut(s) 192, 440, 852, 909, 1155
CaiI CAGNNNCTG 1 cut(s) 1316
Cfr10I RCCGGY 3 cut(s) 190, 341, 431
Cfr13I GGNCC 8 cut(s) 403, 404, 429, 613, 715, 767, 1198, 1390
Cfr9I CCCGGG 1 cut(s) 400
CseI GACGC 1 cut(s) 33
Csp6I GTAC 4 cut(s) 244, 1027, 1324, 1420
CspAI ACCGGT 1 cut(s) 341
CviAII CATG 4 cut(s) 29, 538, 1063, 1231
CviQI GTAC 4 cut(s) 244, 1027, 1324, 1420
DdeI CTNAG 2 cut(s) 690, 1471
DpnI GATC 4 cut(s) 486, 779, 836, 1307
DpnII GATC 4 cut(s) 484, 777, 834, 1305
EaeI YGGCCR 1 cut(s) 297
Eam1104I CTCTTC 2 cut(s) 61, 366
EarI CTCTTC 2 cut(s) 61, 366
Eco130I CCWWGG 3 cut(s) 28, 537, 594
Eco24I GRGCYC 2 cut(s) 407, 1290
Eco31I GGTCTC 2 cut(s) 332, 797
Eco47I GGWCC 5 cut(s) 613, 715, 767, 1198, 1390
Eco57I CTGAAG 1 cut(s) 156
Eco88I CYCGRG 1 cut(s) 400
EcoO109I RGGNCCY 4 cut(s) 715, 767, 1198, 1390
EcoRII CCWGG 1 cut(s) 1185
EcoT14I CCWWGG 3 cut(s) 28, 537, 594
EcoT38I GRGCYC 2 cut(s) 407, 1290
ErhI CCWWGG 3 cut(s) 28, 537, 594
FaeI CATG 4 cut(s) 32, 541, 1066, 1234
FalI AAGNNNNNCTT 6 cut(s) 488, 520, 1090, 1122, 1346, 1378
FaqI GGGAC 3 cut(s) 728, 780, 1211
FatI CATG 4 cut(s) 28, 537, 1062, 1230
FauI CCCGC 1 cut(s) 97
Fnu4HI GCNGC 1 cut(s) 101
FokI GGATG 3 cut(s) 536, 872, 942
FriOI GRGCYC 2 cut(s) 407, 1290
Fsp4HI GCNGC 1 cut(s) 101
FspBI CTAG 3 cut(s) 215, 675, 885
GluI GCNGC 1 cut(s) 101
HaeIII GGCC 4 cut(s) 299, 405, 431, 610
HapII CCGG 7 cut(s) 191, 342, 401, 424, 432, 611, 830
HgaI GACGC 1 cut(s) 33
Hin1I GRCGYC 1 cut(s) 25
Hin1II CATG 4 cut(s) 32, 541, 1066, 1234
HindIII AAGCTT 1 cut(s) 1073
HinfI GANTC 5 cut(s) 129, 259, 740, 881, 1475
HpaII CCGG 7 cut(s) 191, 342, 401, 424, 432, 611, 830
HphI GGTGA 4 cut(s) 65, 709, 973, 1004
Hpy166II GTNNAC 3 cut(s) 1027, 1119, 1420
Hpy188I TCNGA 4 cut(s) 258, 270, 278, 691
Hpy188III TCNNGA 5 cut(s) 748, 871, 980, 1042, 1148
Hpy8I GTNNAC 3 cut(s) 1027, 1119, 1420
Hpy99I CGWCG 1 cut(s) 27
HpyAV CCTTC 5 cut(s) 244, 324, 650, 787, 1402
HpyCH4III ACNGT 2 cut(s) 330, 387
HpyCH4IV ACGT 2 cut(s) 663, 1416
HpyCH4V TGCA 6 cut(s) 103, 515, 854, 1049, 1230, 1343
HpyF10VI GCNNNNNNNGC 2 cut(s) 501, 533
HpyF3I CTNAG 2 cut(s) 690, 1471
HpySE526I ACGT 2 cut(s) 663, 1416
Hsp92I GRCGYC 1 cut(s) 25
Hsp92II CATG 4 cut(s) 32, 541, 1066, 1234
KflI GGGWCCC 2 cut(s) 715, 1198
KroI GCCGGC 1 cut(s) 190
KroNI GCCGGC 1 cut(s) 192
Kzo9I GATC 4 cut(s) 484, 777, 834, 1305
LmnI GCTCC 2 cut(s) 890, 1293
Lsp1109I GCAGC 1 cut(s) 87
LweI GCATC 4 cut(s) 502, 514, 559, 920
MaeI CTAG 3 cut(s) 215, 675, 885
MaeII ACGT 2 cut(s) 663, 1416
MaeIII GTNAC 2 cut(s) 352, 1163
MalI GATC 4 cut(s) 486, 779, 836, 1307
MbiI CCGCTC 1 cut(s) 893
MboI GATC 4 cut(s) 484, 777, 834, 1305
MboII GAAGA 5 cut(s) 48, 99, 162, 374, 383
MflI RGATCY 2 cut(s) 777, 1305
MhlI GDGCHC 3 cut(s) 381, 407, 1290
MlsI TGGCCA 1 cut(s) 299
MluNI TGGCCA 1 cut(s) 299
MmeI TCCRAC 3 cut(s) 312, 618, 1338
Mox20I TGGCCA 1 cut(s) 299
MroNI GCCGGC 1 cut(s) 190
MroXI GAANNNNTTC 2 cut(s) 419, 503
MscI TGGCCA 1 cut(s) 299
MseI TTAA 7 cut(s) 762, 809, 1071, 1079, 1097, 1131, 1320
MslI CAYNNNNRTG 1 cut(s) 978
Msp20I TGGCCA 1 cut(s) 299
MspA1I CMGCKG 1 cut(s) 566
MspCI CTTAAG 1 cut(s) 761
MspI CCGG 7 cut(s) 191, 342, 401, 424, 432, 611, 830
MspR9I CCNGG 4 cut(s) 401, 402, 831, 1187
Mva1269I GAATGC 3 cut(s) 103, 1037, 1051
MvaI CCWGG 1 cut(s) 1187
MvnI CGCG 2 cut(s) 1293, 1328
MwoI GCNNNNNNNGC 2 cut(s) 501, 533
NaeI GCCGGC 1 cut(s) 192
NciI CCSGG 3 cut(s) 401, 402, 831
NcoI CCATGG 2 cut(s) 28, 537
NdeII GATC 4 cut(s) 484, 777, 834, 1305
NgoMIV GCCGGC 1 cut(s) 190
NlaIII CATG 4 cut(s) 32, 541, 1066, 1234
NmuCI GTSAC 2 cut(s) 352, 1163
NspV TTCGAA 2 cut(s) 648, 1463
PctI GAATGC 3 cut(s) 103, 1037, 1051
PdiI GCCGGC 1 cut(s) 192
PdmI GAANNNNTTC 2 cut(s) 419, 503
PfeI GAWTC 5 cut(s) 129, 259, 740, 881, 1475
PflFI GACNNNGTC 1 cut(s) 1372
PfoI TCCNGGA 1 cut(s) 1185
PinAI ACCGGT 1 cut(s) 341
PkrI GCNGC 1 cut(s) 102
Ppu21I YACGTR 1 cut(s) 1417
PpuMI RGGWCCY 4 cut(s) 715, 767, 1198, 1390
Psp5II RGGWCCY 4 cut(s) 715, 767, 1198, 1390
Psp6I CCWGG 1 cut(s) 1185
PspGI CCWGG 1 cut(s) 1185
PspOMI GGGCCC 1 cut(s) 403
PspPI GGNCC 8 cut(s) 403, 404, 429, 613, 715, 767, 1198, 1390
PspPPI RGGWCCY 4 cut(s) 715, 767, 1198, 1390
PstNI CAGNNNCTG 1 cut(s) 1316
PsuI RGATCY 2 cut(s) 777, 1305
PsyI GACNNNGTC 1 cut(s) 1372
RsaI GTAC 4 cut(s) 245, 1028, 1325, 1421
RsaNI GTAC 4 cut(s) 244, 1027, 1324, 1420
RseI CAYNNNNRTG 1 cut(s) 978
SaqAI TTAA 7 cut(s) 762, 809, 1071, 1079, 1097, 1131, 1320
SatI GCNGC 1 cut(s) 101
Sau3AI GATC 4 cut(s) 484, 777, 834, 1305
Sau96I GGNCC 8 cut(s) 403, 404, 429, 613, 715, 767, 1198, 1390
ScrFI CCNGG 4 cut(s) 401, 402, 831, 1187
SduI GDGCHC 3 cut(s) 381, 407, 1290
SfaNI GCATC 4 cut(s) 502, 514, 559, 920
SfuI TTCGAA 2 cut(s) 648, 1463
SinI GGWCC 5 cut(s) 613, 715, 767, 1198, 1390
SmaI CCCGGG 1 cut(s) 402
SmiMI CAYNNNNRTG 1 cut(s) 978
SmlI CTYRAG 1 cut(s) 761
SmoI CTYRAG 1 cut(s) 761
SsiI CCGC 6 cut(s) 90, 226, 564, 893, 1291, 1328
SspI AATATT 1 cut(s) 294
SspMI CTAG 3 cut(s) 215, 675, 885
StyD4I CCNGG 4 cut(s) 399, 400, 829, 1185
StyI CCWWGG 3 cut(s) 28, 537, 594
TaaI ACNGT 2 cut(s) 330, 387
TaiI ACGT 2 cut(s) 666, 1419
TaqI TCGA 6 cut(s) 249, 648, 1014, 1367, 1450, 1463
TatI WGTACW 1 cut(s) 1026
TfiI GAWTC 5 cut(s) 129, 259, 740, 881, 1475
Tru1I TTAA 7 cut(s) 762, 809, 1071, 1079, 1097, 1131, 1320
Tru9I TTAA 7 cut(s) 762, 809, 1071, 1079, 1097, 1131, 1320
TscAI CASTG 4 cut(s) 417, 538, 795, 861
TseFI GTSAC 2 cut(s) 352, 1163
TseI GCWGC 1 cut(s) 100
Tsp45I GTSAC 2 cut(s) 352, 1163
TspDTI ATGAA 3 cut(s) 669, 732, 1367
TspGWI ACGGA 1 cut(s) 770
TspMI CCCGGG 1 cut(s) 400
TspRI CASTG 4 cut(s) 417, 538, 795, 861
Tth111I GACNNNGTC 1 cut(s) 1372
Vha464I CTTAAG 1 cut(s) 761
VpaK11BI GGWCC 5 cut(s) 613, 715, 767, 1198, 1390
XapI RAATTY 1 cut(s) 1270
XcmI CCANNNNNNNNNTGG 1 cut(s) 535
XmaI CCCGGG 1 cut(s) 400
XmnI GAANNNNTTC 2 cut(s) 419, 503
XspI CTAG 3 cut(s) 215, 675, 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.