pycom10g01500

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
1532656 .. 1533873
1218 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1218 bp
ATGGTGCCTTCACAAGTGACCTCTCTTGTGGTCACTCTCCTAGTGGCAATAGTCTCTCTCACATTGCCTTCAGAAACTTTAGCTAATTACCCTTACTCATCTCCACCACCACCGGCCTCTCCTCCCTACCATTACAAGTCACCACCGCCTCCTTCTCCTTCTCCTCCAGTGCACTACTCACCACCTAAGCATCCCTACCACCCTAAGTCACCACCACCTCCTCCTCCAGTGCACTACTCACCACCTAAGCATCCCTACCGCCCTAAGTCACCATCACCTCCTCCTCCAGTGCACTTACCACCTAGGCATCCCTACCACCCCAAGTCACCACCACCACCACCAAAGCCTTACCACTACAAATCCCCACCACCACCTCCTCCTCCAGTGCACTCACCACCCCCACCTAAGGAGCCCTACCACTACAAGTCTCCACCACCACCACCCAAGAAGCCCTACCACTACAAATCTCCCCCACCACCTCCTCCTCCAGTTCACTTACCACCACCTCCCAAGGAGCCTTACCACTACAAATCTCCACCACCACCACCCAAGAAACCTTACCATTACAAGTCTCCTCCACCACCACCAAAGAAGCCTTACCATTACATGTCTCATCCCCCACCAGTTTACTCACCACCTCCACTAGTGCACTCACCCCCACCACCAAAGAAGCCCTACCATTATAAGTCTCCTCCCCCACCAGTGTACTCACCACCTCCACCAGTGCACTCACCCCCACCACCAAAGAAGCCTTACCATTATAAATCTCCTCCCTCGCCAGTATATTCACCACCTCCACCAGTGCACTCACCCCAACTACCAAAGAAGCCCTACTATTACAGATCCCCACCACCATCACACAATAAGCCTTACCACTACAAGTCCCCACCACCTCCTTCTCCTACTCCCCCTAAATACTCGCCACCTAAGCACCCCTACCACTACAAGTCACCACCACCACCACCACCACCGAAGAAGCCTTACCACTACAAGTCTCCACCACCACCACCTCCTCCAGTTCCCACACCATCTCCACCCAAGAAACCTTACCACTACAAGTCTCCCCCACCACCACCTCTAATCTACAAGTCTCCTCCACCACCAGTTTACTCACCACCACCACCACCTAAGAAACCTTACAAACCACCAACTCCTCCAGCAGTTCACCCACCACACGGTTATATCTATTCCTCACCTCCACCTCCTCACCACTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

406

Amino Acids

45.18

Weight (kDa)

9.95

Isoelectric Point (pI)

141.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 684, 762
AccB1I GGYRCC 1 cut(s) 4
AciI CCGC 2 cut(s) 146, 259
AclWI GGATC 1 cut(s) 837
AcuI CTGAAG 1 cut(s) 54
AfaI GTAC 1 cut(s) 707
AfiI CCNNNNNNNGG 2 cut(s) 406, 1175
AflIII ACRYGT 1 cut(s) 606
AhlI ACTAGT 1 cut(s) 643
AluBI AGCT 1 cut(s) 83
AluI AGCT 1 cut(s) 83
Alw21I GWGCWC 7 cut(s) 174, 234, 294, 390, 651, 729, 807
Alw26I GTCTC 8 cut(s) 58, 432, 576, 615, 693, 999, 1065, 1095
Alw44I GTGCAC 7 cut(s) 170, 230, 290, 386, 647, 725, 803
AlwI GGATC 1 cut(s) 837
AoxI GGCC 1 cut(s) 114
ApaLI GTGCAC 7 cut(s) 170, 230, 290, 386, 647, 725, 803
AspA2I CCTAGG 1 cut(s) 302
AvrII CCTAGG 1 cut(s) 302
AxyI CCTNAGG 1 cut(s) 405
BaeGI GKGCMC 7 cut(s) 174, 234, 294, 390, 651, 729, 807
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 414
BarI GAAGNNNNNNTAC 2 cut(s) 965, 997
Bbv12I GWGCWC 7 cut(s) 174, 234, 294, 390, 651, 729, 807
BccI CCATC 3 cut(s) 280, 862, 1036
BcoDI GTCTC 8 cut(s) 58, 432, 576, 615, 693, 999, 1065, 1095
BcuI ACTAGT 1 cut(s) 643
BfaI CTAG 4 cut(s) 41, 303, 644, 1216
BlnI CCTAGG 1 cut(s) 302
BmiI GGNNCC 3 cut(s) 6, 411, 516
BmsI GCATC 3 cut(s) 199, 259, 316
BpmI CTGGAG 7 cut(s) 150, 210, 270, 366, 471, 999, 1140
Bpu10I CCTNAGC 3 cut(s) 186, 246, 927
BsaJI CCNNGG 2 cut(s) 302, 510
BsaXI ACNNNNNCTCC 2 cut(s) 1015, 1045
Bsc4I CCNNNNNNNGG 2 cut(s) 406, 1175
Bse118I RCCGGY 1 cut(s) 112
Bse21I CCTNAGG 1 cut(s) 405
Bse3DI GCAATG 1 cut(s) 62
BseDI CCNNGG 2 cut(s) 302, 510
BseGI GGATG 4 cut(s) 190, 250, 307, 613
BseLI CCNNNNNNNGG 2 cut(s) 406, 1175
BseMI GCAATG 1 cut(s) 62
BseSI GKGCMC 7 cut(s) 174, 234, 294, 390, 651, 729, 807
BshFI GGCC 1 cut(s) 116
BshNI GGYRCC 1 cut(s) 4
BsiHKAI GWGCWC 7 cut(s) 174, 234, 294, 390, 651, 729, 807
BsiSI CCGG 1 cut(s) 113
BslFI GGGAC 1 cut(s) 868
BslI CCNNNNNNNGG 2 cut(s) 406, 1175
BsmAI GTCTC 8 cut(s) 58, 432, 576, 615, 693, 999, 1065, 1095
BsmFI GGGAC 1 cut(s) 868
BsnI GGCC 1 cut(s) 116
Bsp1286I GDGCHC 8 cut(s) 174, 234, 294, 390, 414, 651, 729, 807
Bsp143I GATC 1 cut(s) 842
BspACI CCGC 2 cut(s) 146, 259
BspANI GGCC 1 cut(s) 116
BspLI GGNNCC 3 cut(s) 6, 411, 516
BspPI GGATC 1 cut(s) 837
BspT107I GGYRCC 1 cut(s) 4
BsrDI GCAATG 1 cut(s) 62
BsrFI RCCGGY 1 cut(s) 112
BssAI RCCGGY 1 cut(s) 112
BssECI CCNNGG 2 cut(s) 302, 510
BssMI GATC 1 cut(s) 842
BssT1I CCWWGG 2 cut(s) 302, 510
Bst4CI ACNGT 1 cut(s) 1178
BstDEI CTNAG 7 cut(s) 186, 204, 246, 264, 405, 927, 1128
BstF5I GGATG 4 cut(s) 190, 250, 307, 613
BstKTI GATC 1 cut(s) 845
BstMAI GTCTC 8 cut(s) 58, 432, 576, 615, 693, 999, 1065, 1095
BstMBI GATC 1 cut(s) 842
BstMWI GCNNNNNNNGC 1 cut(s) 928
BstNSI RCATGY 1 cut(s) 610
BstSLI GKGCMC 7 cut(s) 174, 234, 294, 390, 651, 729, 807
BstX2I RGATCY 1 cut(s) 842
BstYI RGATCY 1 cut(s) 842
Bsu36I CCTNAGG 1 cut(s) 405
BsuRI GGCC 1 cut(s) 116
BtsCI GGATG 4 cut(s) 190, 250, 307, 613
BtsIMutI CAGTG 7 cut(s) 174, 234, 294, 390, 708, 729, 807
Cfr10I RCCGGY 1 cut(s) 112
Csp6I GTAC 1 cut(s) 706
CviAII CATG 1 cut(s) 607
CviQI GTAC 1 cut(s) 706
DdeI CTNAG 7 cut(s) 186, 204, 246, 264, 405, 927, 1128
DpnI GATC 1 cut(s) 844
DpnII GATC 1 cut(s) 842
Eco130I CCWWGG 2 cut(s) 302, 510
Eco24I GRGCYC 1 cut(s) 414
Eco57I CTGAAG 1 cut(s) 54
Eco81I CCTNAGG 1 cut(s) 405
EcoT14I CCWWGG 2 cut(s) 302, 510
EcoT38I GRGCYC 1 cut(s) 414
ErhI CCWWGG 2 cut(s) 302, 510
FaeI CATG 1 cut(s) 610
FaiI YATR 5 cut(s) 608, 684, 762, 784, 1182
FaqI GGGAC 1 cut(s) 868
FatI CATG 1 cut(s) 606
FokI GGATG 4 cut(s) 177, 237, 294, 600
FriOI GRGCYC 1 cut(s) 414
FspBI CTAG 4 cut(s) 41, 303, 644, 1216
GsuI CTGGAG 7 cut(s) 150, 210, 270, 366, 471, 999, 1140
HaeIII GGCC 1 cut(s) 116
HapII CCGG 1 cut(s) 113
Hin1II CATG 1 cut(s) 610
HpaII CCGG 1 cut(s) 113
Hpy188I TCNGA 1 cut(s) 73
HpyAV CCTTC 5 cut(s) 18, 78, 162, 168, 906
HpyCH4III ACNGT 1 cut(s) 1178
HpyCH4V TGCA 7 cut(s) 172, 232, 292, 388, 649, 727, 805
HpyF10VI GCNNNNNNNGC 1 cut(s) 928
HpyF3I CTNAG 7 cut(s) 186, 204, 246, 264, 405, 927, 1128
Hsp92II CATG 1 cut(s) 610
Kzo9I GATC 1 cut(s) 842
LmnI GCTCC 2 cut(s) 409, 514
LweI GCATC 3 cut(s) 199, 259, 316
MaeI CTAG 4 cut(s) 41, 303, 644, 1216
MaeIII GTNAC 7 cut(s) 16, 31, 138, 207, 267, 324, 948
MalI GATC 1 cut(s) 844
MboI GATC 1 cut(s) 842
MboII GAAGA 1 cut(s) 985
MflI RGATCY 1 cut(s) 842
MhlI GDGCHC 8 cut(s) 174, 234, 294, 390, 414, 651, 729, 807
MluCI AATT 1 cut(s) 85
MspI CCGG 1 cut(s) 113
MwoI GCNNNNNNNGC 1 cut(s) 928
NdeII GATC 1 cut(s) 842
NlaIII CATG 1 cut(s) 610
NlaIV GGNNCC 3 cut(s) 6, 411, 516
NmuCI GTSAC 7 cut(s) 16, 31, 138, 207, 267, 324, 948
NspI RCATGY 1 cut(s) 610
PciI ACATGT 1 cut(s) 606
PscI ACATGT 1 cut(s) 606
PsiI TTATAA 2 cut(s) 684, 762
PspN4I GGNNCC 3 cut(s) 6, 411, 516
PsuI RGATCY 1 cut(s) 842
RsaI GTAC 1 cut(s) 707
RsaNI GTAC 1 cut(s) 706
Sau3AI GATC 1 cut(s) 842
SduI GDGCHC 8 cut(s) 174, 234, 294, 390, 414, 651, 729, 807
SfaNI GCATC 3 cut(s) 199, 259, 316
SpeI ACTAGT 1 cut(s) 643
Sse9I AATT 1 cut(s) 85
SsiI CCGC 2 cut(s) 146, 259
SspMI CTAG 4 cut(s) 41, 303, 644, 1216
StyI CCWWGG 2 cut(s) 302, 510
TaaI ACNGT 1 cut(s) 1178
TasI AATT 1 cut(s) 85
TatI WGTACW 1 cut(s) 705
TscAI CASTG 7 cut(s) 174, 234, 294, 390, 708, 729, 807
TseFI GTSAC 7 cut(s) 16, 31, 138, 207, 267, 324, 948
Tsp45I GTSAC 7 cut(s) 16, 31, 138, 207, 267, 324, 948
TspRI CASTG 7 cut(s) 174, 234, 294, 390, 708, 729, 807
VneI GTGCAC 7 cut(s) 170, 230, 290, 386, 647, 725, 803
XceI RCATGY 1 cut(s) 610
XmaJI CCTAGG 1 cut(s) 302
XspI CTAG 4 cut(s) 41, 303, 644, 1216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.