Violaxanthin
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G21860 |
| fragaria_vesca | FvH4_1g22940 |
| malus_domestica | MD10G1028700.v1.1 |
| prunus_persica | Prupe.6G168900_v2.0.a1 |
| pyrus_communis | pycom10g01870 pycom10g01880 |
| rosa_chinensis | RchiOBHm_Chr2g0117401 RchiOBHm_Chr2g0117441 RchiOBHm_Chr2g0117461 |
| rosa_laevigata | RLG00000018348 |
| rosa_multiflora | Rmu_co8249465.1_g000001 Rmu_sc0003454.1_g000022 Rmu_sc0009364.1_g000003 Rmu_sc0009364.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00126510 |
| rosa_rugosa | Rorug02G0212700 |
| rosa_samantha | Rh2AG267900 Rh2AG268000 Rh2BG280000 Rh2BG280200 Rh2CG272000 Rh2DG274900 Rh2DG275100 Rh2DG294100 Rh2DG294300 Rh2DG294500 Rh5AG100300 |
| rosa_wichuraiana | Rw2G021190 Rw2G021200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 878 |
| AccB1I | GGYRCC | 1 cut(s) | 428 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 456 |
| AccI | GTMKAC | 2 cut(s) | 501, 1685 |
| AccII | CGCG | 1 cut(s) | 371 |
| AccIII | TCCGGA | 1 cut(s) | 1600 |
| AclWI | GGATC | 6 cut(s) | 805, 805, 843, 989, 1002, 1147 |
| AcoI | YGGCCR | 1 cut(s) | 421 |
| AcsI | RAATTY | 5 cut(s) | 89, 361, 568, 1187, 1725 |
| AcuI | CTGAAG | 3 cut(s) | 932, 1242, 1441 |
| AfaI | GTAC | 5 cut(s) | 101, 978, 1316, 1358, 1377 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 343, 456, 1721 |
| AgeI | ACCGGT | 1 cut(s) | 1580 |
| AjnI | CCWGG | 1 cut(s) | 159 |
| AleI | CACNNNNGTG | 1 cut(s) | 829 |
| Alw26I | GTCTC | 2 cut(s) | 140, 383 |
| AlwI | GGATC | 6 cut(s) | 805, 805, 843, 989, 1002, 1147 |
| Ama87I | CYCGRG | 2 cut(s) | 1557, 1730 |
| Aor13HI | TCCGGA | 1 cut(s) | 1600 |
| AoxI | GGCC | 3 cut(s) | 421, 968, 1338 |
| ApeKI | GCWGC | 9 cut(s) | 197, 200, 257, 266, 269, 948, 1035, 1553, 1562 |
| ApoI | RAATTY | 5 cut(s) | 89, 361, 568, 1187, 1725 |
| AseI | ATTAAT | 2 cut(s) | 785, 882 |
| AsiGI | ACCGGT | 1 cut(s) | 1580 |
| AspLEI | GCGC | 2 cut(s) | 331, 371 |
| AspS9I | GGNCC | 2 cut(s) | 968, 1712 |
| AsuC2I | CCSGG | 3 cut(s) | 298, 338, 1443 |
| AsuHPI | GGTGA | 6 cut(s) | 175, 388, 412, 616, 967, 1167 |
| AsuII | TTCGAA | 1 cut(s) | 667 |
| AvaI | CYCGRG | 2 cut(s) | 1557, 1730 |
| AvaII | GGWCC | 1 cut(s) | 1712 |
| AxyI | CCTNAGG | 1 cut(s) | 972 |
| BaeGI | GKGCMC | 1 cut(s) | 160 |
| BamHI | GGATCC | 1 cut(s) | 994 |
| BanI | GGYRCC | 1 cut(s) | 428 |
| BbvCI | CCTCAGC | 1 cut(s) | 434 |
| BbvI | GCAGC | 9 cut(s) | 187, 209, 269, 278, 281, 935, 1047, 1540, 1549 |
| BccI | CCATC | 3 cut(s) | 83, 1390, 1598 |
| BceAI | ACGGC | 3 cut(s) | 290, 396, 548 |
| BciT130I | CCWGG | 1 cut(s) | 161 |
| BclI | TGATCA | 1 cut(s) | 1297 |
| BcnI | CCSGG | 3 cut(s) | 298, 338, 1443 |
| BcoDI | GTCTC | 2 cut(s) | 140, 383 |
| BfaI | CTAG | 2 cut(s) | 1094, 1652 |
| BfmI | CTRYAG | 2 cut(s) | 201, 1563 |
| BglII | AGATCT | 1 cut(s) | 1225 |
| Bme1390I | CCNGG | 4 cut(s) | 161, 298, 338, 1443 |
| Bme18I | GGWCC | 1 cut(s) | 1712 |
| BmeT110I | CYCGRG | 2 cut(s) | 1557, 1730 |
| BmgT120I | GGNCC | 2 cut(s) | 968, 1712 |
| BmiI | GGNNCC | 2 cut(s) | 430, 996 |
| BmrFI | CCNGG | 4 cut(s) | 161, 298, 338, 1443 |
| BmrI | ACTGGG | 1 cut(s) | 1034 |
| BmsI | GCATC | 1 cut(s) | 1135 |
| BmuI | ACTGGG | 1 cut(s) | 1034 |
| BpmI | CTGGAG | 1 cut(s) | 1423 |
| Bpu10I | CCTNAGC | 1 cut(s) | 434 |
| Bpu14I | TTCGAA | 1 cut(s) | 667 |
| BpuEI | CTTGAG | 1 cut(s) | 428 |
| BpuMI | CCSGG | 3 cut(s) | 298, 338, 1443 |
| Bsa29I | ATCGAT | 1 cut(s) | 1770 |
| BsaJI | CCNNGG | 9 cut(s) | 118, 159, 336, 424, 455, 741, 1179, 1442, 1731 |
| BsaWI | WCCGGW | 2 cut(s) | 1580, 1600 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 52, 82, 1252, 1282 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 343, 456, 1721 |
| Bse118I | RCCGGY | 3 cut(s) | 272, 397, 1580 |
| Bse1I | ACTGG | 3 cut(s) | 899, 1040, 1364 |
| Bse21I | CCTNAGG | 1 cut(s) | 972 |
| Bse3DI | GCAATG | 1 cut(s) | 1068 |
| BseAI | TCCGGA | 1 cut(s) | 1600 |
| BseBI | CCWGG | 1 cut(s) | 161 |
| BseCI | ATCGAT | 1 cut(s) | 1770 |
| BseDI | CCNNGG | 9 cut(s) | 118, 159, 336, 424, 455, 741, 1179, 1442, 1731 |
| BseGI | GGATG | 5 cut(s) | 856, 1150, 1513, 1609, 1810 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 343, 456, 1721 |
| BseMI | GCAATG | 1 cut(s) | 1068 |
| BseMII | CTCAG | 4 cut(s) | 145, 448, 935, 986 |
| BseNI | ACTGG | 3 cut(s) | 899, 1040, 1364 |
| BseRI | GAGGAG | 2 cut(s) | 401, 1420 |
| BseSI | GKGCMC | 1 cut(s) | 160 |
| BseXI | GCAGC | 9 cut(s) | 187, 209, 269, 278, 281, 935, 1047, 1540, 1549 |
| BseYI | CCCAGC | 1 cut(s) | 1288 |
| BsgI | GTGCAG | 2 cut(s) | 612, 1054 |
| Bsh1236I | CGCG | 1 cut(s) | 371 |
| BshFI | GGCC | 3 cut(s) | 423, 970, 1340 |
| BshNI | GGYRCC | 1 cut(s) | 428 |
| BshTI | ACCGGT | 1 cut(s) | 1580 |
| BshVI | ATCGAT | 1 cut(s) | 1770 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1557, 1730 |
| BsiSI | CCGG | 7 cut(s) | 273, 298, 338, 398, 1442, 1581, 1601 |
| BslFI | GGGAC | 2 cut(s) | 887, 1459 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 343, 456, 1721 |
| BsmAI | GTCTC | 2 cut(s) | 140, 383 |
| BsmFI | GGGAC | 2 cut(s) | 887, 1459 |
| BsmI | GAATGC | 1 cut(s) | 1747 |
| BsnI | GGCC | 3 cut(s) | 423, 970, 1340 |
| BsoBI | CYCGRG | 2 cut(s) | 1557, 1730 |
| Bsp119I | TTCGAA | 1 cut(s) | 667 |
| Bsp1286I | GDGCHC | 1 cut(s) | 160 |
| Bsp13I | TCCGGA | 1 cut(s) | 1600 |
| Bsp19I | CCATGG | 2 cut(s) | 118, 1179 |
| BspANI | GGCC | 3 cut(s) | 423, 970, 1340 |
| BspCNI | CTCAG | 4 cut(s) | 144, 447, 936, 985 |
| BspDI | ATCGAT | 1 cut(s) | 1770 |
| BspEI | TCCGGA | 1 cut(s) | 1600 |
| BspFNI | CGCG | 1 cut(s) | 371 |
| BspHI | TCATGA | 1 cut(s) | 177 |
| BspLI | GGNNCC | 2 cut(s) | 430, 996 |
| BspMAI | CTGCAG | 2 cut(s) | 205, 1567 |
| BspPI | GGATC | 6 cut(s) | 805, 805, 843, 989, 1002, 1147 |
| BspT104I | TTCGAA | 1 cut(s) | 667 |
| BspT107I | GGYRCC | 1 cut(s) | 428 |
| BsrDI | GCAATG | 1 cut(s) | 1068 |
| BsrFI | RCCGGY | 3 cut(s) | 272, 397, 1580 |
| BsrI | ACTGG | 3 cut(s) | 899, 1040, 1364 |
| BssAI | RCCGGY | 3 cut(s) | 272, 397, 1580 |
| BssECI | CCNNGG | 9 cut(s) | 118, 159, 336, 424, 455, 741, 1179, 1442, 1731 |
| BssNAI | GTATAC | 1 cut(s) | 1686 |
| BssT1I | CCWWGG | 5 cut(s) | 118, 424, 455, 741, 1179 |
| Bst1107I | GTATAC | 1 cut(s) | 1686 |
| Bst2UI | CCWGG | 1 cut(s) | 161 |
| Bst4CI | ACNGT | 6 cut(s) | 235, 326, 794, 820, 1167, 1690 |
| Bst6I | CTCTTC | 3 cut(s) | 42, 134, 456 |
| BstBI | TTCGAA | 1 cut(s) | 667 |
| BstC8I | GCNNGC | 1 cut(s) | 968 |
| BstDEI | CTNAG | 6 cut(s) | 131, 434, 920, 944, 972, 1523 |
| BstDSI | CCRYGG | 2 cut(s) | 118, 1179 |
| BstF5I | GGATG | 5 cut(s) | 856, 1150, 1513, 1609, 1810 |
| BstFNI | CGCG | 1 cut(s) | 371 |
| BstHHI | GCGC | 2 cut(s) | 331, 371 |
| BstMAI | GTCTC | 2 cut(s) | 140, 383 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 30, 194, 263, 266, 435, 1559, 1562 |
| BstNI | CCWGG | 1 cut(s) | 161 |
| BstSCI | CCNGG | 4 cut(s) | 159, 296, 336, 1441 |
| BstSFI | CTRYAG | 2 cut(s) | 201, 1563 |
| BstSLI | GKGCMC | 1 cut(s) | 160 |
| BstUI | CGCG | 1 cut(s) | 371 |
| BstV1I | GCAGC | 9 cut(s) | 187, 209, 269, 278, 281, 935, 1047, 1540, 1549 |
| BstX2I | RGATCY | 3 cut(s) | 994, 1152, 1225 |
| BstYI | RGATCY | 3 cut(s) | 994, 1152, 1225 |
| BstZ17I | GTATAC | 1 cut(s) | 1686 |
| Bsu15I | ATCGAT | 1 cut(s) | 1770 |
| Bsu36I | CCTNAGG | 1 cut(s) | 972 |
| BsuRI | GGCC | 3 cut(s) | 423, 970, 1340 |
| BsuTUI | ATCGAT | 1 cut(s) | 1770 |
| BtgI | CCRYGG | 2 cut(s) | 118, 1179 |
| BtsCI | GGATG | 5 cut(s) | 856, 1150, 1513, 1609, 1810 |
| BtsI | GCAGTG | 1 cut(s) | 477 |
| BtsIMutI | CAGTG | 5 cut(s) | 477, 799, 941, 1465, 1758 |
| Cac8I | GCNNGC | 1 cut(s) | 968 |
| CciI | TCATGA | 1 cut(s) | 177 |
| CfoI | GCGC | 2 cut(s) | 331, 371 |
| Cfr10I | RCCGGY | 3 cut(s) | 272, 397, 1580 |
| Cfr13I | GGNCC | 2 cut(s) | 968, 1712 |
| ClaI | ATCGAT | 1 cut(s) | 1770 |
| Csp6I | GTAC | 5 cut(s) | 100, 977, 1315, 1357, 1376 |
| CspAI | ACCGGT | 1 cut(s) | 1580 |
| CviAII | CATG | 8 cut(s) | 119, 178, 291, 469, 952, 1180, 1211, 1704 |
| CviQI | GTAC | 5 cut(s) | 100, 977, 1315, 1357, 1376 |
| DdeI | CTNAG | 6 cut(s) | 131, 434, 920, 944, 972, 1523 |
| EaeI | YGGCCR | 1 cut(s) | 421 |
| Eam1104I | CTCTTC | 3 cut(s) | 42, 134, 456 |
| EarI | CTCTTC | 3 cut(s) | 42, 134, 456 |
| EciI | GGCGGA | 2 cut(s) | 398, 1426 |
| Eco130I | CCWWGG | 5 cut(s) | 118, 424, 455, 741, 1179 |
| Eco47I | GGWCC | 1 cut(s) | 1712 |
| Eco57I | CTGAAG | 3 cut(s) | 932, 1242, 1441 |
| Eco81I | CCTNAGG | 1 cut(s) | 972 |
| Eco88I | CYCGRG | 2 cut(s) | 1557, 1730 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1712 |
| EcoRI | GAATTC | 2 cut(s) | 361, 1725 |
| EcoRII | CCWGG | 1 cut(s) | 159 |
| EcoT14I | CCWWGG | 5 cut(s) | 118, 424, 455, 741, 1179 |
| ErhI | CCWWGG | 5 cut(s) | 118, 424, 455, 741, 1179 |
| FaeI | CATG | 8 cut(s) | 122, 181, 294, 472, 955, 1183, 1214, 1707 |
| FaqI | GGGAC | 2 cut(s) | 887, 1459 |
| FatI | CATG | 8 cut(s) | 118, 177, 290, 468, 951, 1179, 1210, 1703 |
| FauI | CCCGC | 1 cut(s) | 959 |
| FauNDI | CATATG | 1 cut(s) | 511 |
| FbaI | TGATCA | 1 cut(s) | 1297 |
| FblI | GTMKAC | 2 cut(s) | 501, 1685 |
| FokI | GGATG | 4 cut(s) | 863, 1157, 1520, 1616 |
| FspBI | CTAG | 2 cut(s) | 1094, 1652 |
| GlaI | GCGC | 2 cut(s) | 330, 370 |
| GsaI | CCCAGC | 1 cut(s) | 1292 |
| GsuI | CTGGAG | 1 cut(s) | 1423 |
| HaeIII | GGCC | 3 cut(s) | 423, 970, 1340 |
| HapII | CCGG | 7 cut(s) | 273, 298, 338, 398, 1442, 1581, 1601 |
| HhaI | GCGC | 2 cut(s) | 331, 371 |
| Hin1II | CATG | 8 cut(s) | 122, 181, 294, 472, 955, 1183, 1214, 1707 |
| Hin6I | GCGC | 2 cut(s) | 329, 369 |
| HinP1I | GCGC | 2 cut(s) | 329, 369 |
| HindIII | AAGCTT | 1 cut(s) | 763 |
| HinfI | GANTC | 8 cut(s) | 622, 629, 643, 686, 916, 1027, 1084, 1422 |
| HpaII | CCGG | 7 cut(s) | 273, 298, 338, 398, 1442, 1581, 1601 |
| HphI | GGTGA | 6 cut(s) | 175, 388, 412, 616, 967, 1167 |
| Hpy166II | GTNNAC | 4 cut(s) | 6, 450, 502, 1686 |
| Hpy188I | TCNGA | 4 cut(s) | 134, 550, 802, 1008 |
| Hpy8I | GTNNAC | 4 cut(s) | 6, 450, 502, 1686 |
| HpyAV | CCTTC | 2 cut(s) | 1192, 1330 |
| HpyCH4III | ACNGT | 6 cut(s) | 235, 326, 794, 820, 1167, 1690 |
| HpyCH4IV | ACGT | 1 cut(s) | 589 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 30, 194, 263, 266, 435, 1559, 1562 |
| HpyF3I | CTNAG | 6 cut(s) | 131, 434, 920, 944, 972, 1523 |
| HpySE526I | ACGT | 1 cut(s) | 589 |
| Hsp92II | CATG | 8 cut(s) | 122, 181, 294, 472, 955, 1183, 1214, 1707 |
| HspAI | GCGC | 2 cut(s) | 329, 369 |
| Kpn2I | TCCGGA | 1 cut(s) | 1600 |
| Ksp22I | TGATCA | 1 cut(s) | 1297 |
| LmnI | GCTCC | 3 cut(s) | 29, 477, 1678 |
| Lsp1109I | GCAGC | 9 cut(s) | 187, 209, 269, 278, 281, 935, 1047, 1540, 1549 |
| LweI | GCATC | 1 cut(s) | 1135 |
| MaeI | CTAG | 2 cut(s) | 1094, 1652 |
| MaeII | ACGT | 1 cut(s) | 589 |
| MaeIII | GTNAC | 5 cut(s) | 170, 376, 616, 1055, 1173 |
| MboII | GAAGA | 9 cut(s) | 29, 70, 151, 272, 473, 925, 970, 1235, 1405 |
| MfeI | CAATTG | 1 cut(s) | 1500 |
| MflI | RGATCY | 3 cut(s) | 994, 1152, 1225 |
| MhlI | GDGCHC | 1 cut(s) | 160 |
| MlyI | GAGTC | 3 cut(s) | 680, 1093, 1431 |
| MmeI | TCCRAC | 2 cut(s) | 289, 986 |
| MroI | TCCGGA | 1 cut(s) | 1600 |
| MseI | TTAA | 9 cut(s) | 351, 636, 785, 882, 1185, 1640, 1668, 1692, 1764 |
| MslI | CAYNNNNRTG | 3 cut(s) | 182, 829, 1018 |
| MspA1I | CMGCKG | 1 cut(s) | 200 |
| MspI | CCGG | 7 cut(s) | 273, 298, 338, 398, 1442, 1581, 1601 |
| MspR9I | CCNGG | 4 cut(s) | 161, 298, 338, 1443 |
| MunI | CAATTG | 1 cut(s) | 1500 |
| Mva1269I | GAATGC | 1 cut(s) | 1747 |
| MvaI | CCWGG | 1 cut(s) | 161 |
| MvnI | CGCG | 1 cut(s) | 371 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 30, 194, 263, 266, 435, 1559, 1562 |
| NciI | CCSGG | 3 cut(s) | 298, 338, 1443 |
| NcoI | CCATGG | 2 cut(s) | 118, 1179 |
| NdeI | CATATG | 1 cut(s) | 511 |
| NlaIII | CATG | 8 cut(s) | 122, 181, 294, 472, 955, 1183, 1214, 1707 |
| NlaIV | GGNNCC | 2 cut(s) | 430, 996 |
| NmuCI | GTSAC | 3 cut(s) | 170, 376, 1173 |
| NspV | TTCGAA | 1 cut(s) | 667 |
| OliI | CACNNNNGTG | 1 cut(s) | 829 |
| PaeR7I | CTCGAG | 1 cut(s) | 1557 |
| PagI | TCATGA | 1 cut(s) | 177 |
| PctI | GAATGC | 1 cut(s) | 1747 |
| PfeI | GAWTC | 5 cut(s) | 622, 629, 643, 916, 1027 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 456 |
| PinAI | ACCGGT | 1 cut(s) | 1580 |
| PleI | GAGTC | 3 cut(s) | 680, 1092, 1430 |
| PpsI | GAGTC | 3 cut(s) | 680, 1092, 1430 |
| PpuMI | RGGWCCY | 1 cut(s) | 1712 |
| PshBI | ATTAAT | 2 cut(s) | 785, 882 |
| PsiI | TTATAA | 1 cut(s) | 878 |
| Psp5II | RGGWCCY | 1 cut(s) | 1712 |
| Psp6I | CCWGG | 1 cut(s) | 159 |
| PspFI | CCCAGC | 1 cut(s) | 1288 |
| PspGI | CCWGG | 1 cut(s) | 159 |
| PspN4I | GGNNCC | 2 cut(s) | 430, 996 |
| PspPI | GGNCC | 2 cut(s) | 968, 1712 |
| PspPPI | RGGWCCY | 1 cut(s) | 1712 |
| PspXI | VCTCGAGB | 1 cut(s) | 1557 |
| PstI | CTGCAG | 2 cut(s) | 205, 1567 |
| PsuI | RGATCY | 3 cut(s) | 994, 1152, 1225 |
| PvuII | CAGCTG | 1 cut(s) | 200 |
| RsaI | GTAC | 5 cut(s) | 101, 978, 1316, 1358, 1377 |
| RsaNI | GTAC | 5 cut(s) | 100, 977, 1315, 1357, 1376 |
| RseI | CAYNNNNRTG | 3 cut(s) | 182, 829, 1018 |
| SaqAI | TTAA | 9 cut(s) | 351, 636, 785, 882, 1185, 1640, 1668, 1692, 1764 |
| Sau96I | GGNCC | 2 cut(s) | 968, 1712 |
| SchI | GAGTC | 3 cut(s) | 680, 1093, 1431 |
| ScrFI | CCNGG | 4 cut(s) | 161, 298, 338, 1443 |
| SduI | GDGCHC | 1 cut(s) | 160 |
| SfaNI | GCATC | 1 cut(s) | 1135 |
| SfcI | CTRYAG | 2 cut(s) | 201, 1563 |
| Sfr274I | CTCGAG | 1 cut(s) | 1557 |
| SfuI | TTCGAA | 1 cut(s) | 667 |
| SgrAI | CRCCGGYG | 1 cut(s) | 397 |
| SinI | GGWCC | 1 cut(s) | 1712 |
| SlaI | CTCGAG | 1 cut(s) | 1557 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 182, 829, 1018 |
| SmlI | CTYRAG | 2 cut(s) | 443, 1557 |
| SmoI | CTYRAG | 2 cut(s) | 443, 1557 |
| SspI | AATATT | 1 cut(s) | 664 |
| SspMI | CTAG | 2 cut(s) | 1094, 1652 |
| StyD4I | CCNGG | 4 cut(s) | 159, 296, 336, 1441 |
| StyI | CCWWGG | 5 cut(s) | 118, 424, 455, 741, 1179 |
| TaaI | ACNGT | 6 cut(s) | 235, 326, 794, 820, 1167, 1690 |
| TaiI | ACGT | 1 cut(s) | 592 |
| TaqI | TCGA | 6 cut(s) | 365, 667, 1420, 1484, 1558, 1770 |
| TauI | GCSGC | 1 cut(s) | 250 |
| TfiI | GAWTC | 5 cut(s) | 622, 629, 643, 916, 1027 |
| Tru1I | TTAA | 9 cut(s) | 351, 636, 785, 882, 1185, 1640, 1668, 1692, 1764 |
| Tru9I | TTAA | 9 cut(s) | 351, 636, 785, 882, 1185, 1640, 1668, 1692, 1764 |
| TscAI | CASTG | 5 cut(s) | 484, 799, 948, 1465, 1758 |
| TseFI | GTSAC | 3 cut(s) | 170, 376, 1173 |
| TseI | GCWGC | 9 cut(s) | 197, 200, 257, 266, 269, 948, 1035, 1553, 1562 |
| Tsp45I | GTSAC | 3 cut(s) | 170, 376, 1173 |
| TspDTI | ATGAA | 6 cut(s) | 228, 272, 528, 803, 1227, 1692 |
| TspGWI | ACGGA | 1 cut(s) | 863 |
| TspRI | CASTG | 5 cut(s) | 484, 799, 948, 1465, 1758 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 456 |
| VpaK11BI | GGWCC | 1 cut(s) | 1712 |
| VspI | ATTAAT | 2 cut(s) | 785, 882 |
| XapI | RAATTY | 5 cut(s) | 89, 361, 568, 1187, 1725 |
| XbaI | TCTAGA | 2 cut(s) | 1093, 1651 |
| XhoI | CTCGAG | 1 cut(s) | 1557 |
| XmiI | GTMKAC | 2 cut(s) | 501, 1685 |
| XspI | CTAG | 2 cut(s) | 1094, 1652 |