Violaxanthin
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G21860 |
| fragaria_vesca | FvH4_1g22940 |
| malus_domestica | MD10G1028700.v1.1 |
| prunus_persica | Prupe.6G168900_v2.0.a1 |
| pyrus_communis | pycom10g01870 pycom10g01880 |
| rosa_chinensis | RchiOBHm_Chr2g0117401 RchiOBHm_Chr2g0117441 RchiOBHm_Chr2g0117461 |
| rosa_laevigata | RLG00000018348 |
| rosa_multiflora | Rmu_co8249465.1_g000001 Rmu_sc0003454.1_g000022 Rmu_sc0009364.1_g000003 Rmu_sc0009364.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00126510 |
| rosa_rugosa | Rorug02G0212700 |
| rosa_samantha | Rh2AG267900 Rh2AG268000 Rh2BG280000 Rh2BG280200 Rh2CG272000 Rh2DG274900 Rh2DG275100 Rh2DG294100 Rh2DG294300 Rh2DG294500 Rh5AG100300 |
| rosa_wichuraiana | Rw2G021190 Rw2G021200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 695 |
| AatII | GACGTC | 1 cut(s) | 285 |
| AccB1I | GGYRCC | 1 cut(s) | 718 |
| AccBSI | CCGCTC | 1 cut(s) | 655 |
| AccIII | TCCGGA | 1 cut(s) | 390 |
| AciI | CCGC | 9 cut(s) | 58, 69, 78, 81, 164, 655, 1156, 1352, 1392 |
| AclWI | GGATC | 6 cut(s) | 8, 544, 806, 819, 870, 892 |
| AcsI | RAATTY | 1 cut(s) | 932 |
| AcuI | CTGAAG | 1 cut(s) | 987 |
| AcyI | GRCGYC | 1 cut(s) | 282 |
| AdeI | CACNNNGTG | 1 cut(s) | 298 |
| AfaI | GTAC | 2 cut(s) | 630, 1061 |
| AfeI | AGCGCT | 1 cut(s) | 831 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 262, 456, 822, 1466 |
| AgsI | TTSAA | 7 cut(s) | 52, 310, 464, 485, 836, 844, 1230 |
| AjiI | CACGTC | 1 cut(s) | 1369 |
| AjnI | CCWGG | 2 cut(s) | 807, 1186 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 985, 1017 |
| AleI | CACNNNNGTG | 1 cut(s) | 60 |
| AluBI | AGCT | 4 cut(s) | 467, 765, 1259, 1426 |
| AluI | AGCT | 4 cut(s) | 467, 765, 1259, 1426 |
| AlwI | GGATC | 6 cut(s) | 8, 544, 806, 819, 870, 892 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 736, 796 |
| Aor13HI | TCCGGA | 1 cut(s) | 390 |
| Aor51HI | AGCGCT | 1 cut(s) | 831 |
| AoxI | GGCC | 1 cut(s) | 713 |
| ApeKI | GCWGC | 2 cut(s) | 765, 1298 |
| ApoI | RAATTY | 1 cut(s) | 932 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 234, 266 |
| AspLEI | GCGC | 3 cut(s) | 832, 1298, 1331 |
| AspS9I | GGNCC | 1 cut(s) | 785 |
| AsuHPI | GGTGA | 5 cut(s) | 205, 229, 394, 784, 1132 |
| AvaII | GGWCC | 1 cut(s) | 785 |
| AxyI | CCTNAGG | 1 cut(s) | 1476 |
| BamHI | GGATCC | 1 cut(s) | 811 |
| BanI | GGYRCC | 1 cut(s) | 718 |
| BbsI | GAAGAC | 1 cut(s) | 285 |
| BbvI | GCAGC | 2 cut(s) | 752, 1285 |
| BccI | CCATC | 2 cut(s) | 328, 388 |
| BceAI | ACGGC | 1 cut(s) | 45 |
| BciT130I | CCWGG | 2 cut(s) | 809, 1188 |
| BciVI | GTATCC | 1 cut(s) | 155 |
| BclI | TGATCA | 1 cut(s) | 1042 |
| BfmI | CTRYAG | 1 cut(s) | 728 |
| BfoI | RGCGCY | 3 cut(s) | 833, 1299, 1332 |
| BfuI | GTATCC | 1 cut(s) | 155 |
| BglII | AGATCT | 1 cut(s) | 970 |
| BisI | GCNGC | 8 cut(s) | 69, 78, 81, 165, 656, 766, 1299, 1353 |
| BlsI | GCNGC | 8 cut(s) | 70, 79, 82, 166, 657, 767, 1300, 1354 |
| Bme1390I | CCNGG | 2 cut(s) | 809, 1188 |
| Bme18I | GGWCC | 1 cut(s) | 785 |
| BmgBI | CACGTC | 1 cut(s) | 1369 |
| BmgT120I | GGNCC | 1 cut(s) | 785 |
| BmiI | GGNNCC | 3 cut(s) | 189, 720, 813 |
| BmrFI | CCNGG | 2 cut(s) | 809, 1188 |
| BmsI | GCATC | 2 cut(s) | 880, 1339 |
| BpiI | GAAGAC | 1 cut(s) | 285 |
| BpmI | CTGGAG | 1 cut(s) | 1151 |
| BpuEI | CTTGAG | 1 cut(s) | 245 |
| BsaHI | GRCGYC | 1 cut(s) | 282 |
| BsaJI | CCNNGG | 4 cut(s) | 272, 924, 1186, 1187 |
| BsaWI | WCCGGW | 2 cut(s) | 390, 856 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 997, 1027, 1124, 1154 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 262, 456, 822, 1466 |
| Bse118I | RCCGGY | 3 cut(s) | 190, 214, 715 |
| Bse1I | ACTGG | 3 cut(s) | 1057, 1109, 1330 |
| Bse21I | CCTNAGG | 1 cut(s) | 1476 |
| BseAI | TCCGGA | 1 cut(s) | 390 |
| BseBI | CCWGG | 2 cut(s) | 809, 1188 |
| BseDI | CCNNGG | 4 cut(s) | 272, 924, 1186, 1187 |
| BseGI | GGATG | 3 cut(s) | 399, 895, 1258 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 262, 456, 822, 1466 |
| BseMII | CTCAG | 4 cut(s) | 728, 752, 803, 1467 |
| BseNI | ACTGG | 3 cut(s) | 1057, 1109, 1330 |
| BseRI | GAGGAG | 1 cut(s) | 1165 |
| BseXI | GCAGC | 2 cut(s) | 752, 1285 |
| BseYI | CCCAGC | 1 cut(s) | 1033 |
| BsgI | GTGCAG | 3 cut(s) | 429, 573, 871 |
| BshFI | GGCC | 1 cut(s) | 715 |
| BshNI | GGYRCC | 1 cut(s) | 718 |
| BsiSI | CCGG | 6 cut(s) | 191, 215, 391, 716, 857, 1293 |
| BslFI | GGGAC | 2 cut(s) | 1169, 1204 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 262, 456, 822, 1466 |
| BsmFI | GGGAC | 2 cut(s) | 1169, 1204 |
| BsmI | GAATGC | 1 cut(s) | 1492 |
| BsnI | GGCC | 1 cut(s) | 715 |
| Bsp13I | TCCGGA | 1 cut(s) | 390 |
| Bsp143I | GATC | 9 cut(s) | 13, 536, 740, 811, 862, 897, 970, 1042, 1264 |
| Bsp19I | CCATGG | 1 cut(s) | 924 |
| BspACI | CCGC | 9 cut(s) | 58, 69, 78, 81, 164, 655, 1156, 1352, 1392 |
| BspANI | GGCC | 1 cut(s) | 715 |
| BspCNI | CTCAG | 4 cut(s) | 729, 753, 802, 1468 |
| BspEI | TCCGGA | 1 cut(s) | 390 |
| BspLI | GGNNCC | 3 cut(s) | 189, 720, 813 |
| BspMAI | CTGCAG | 1 cut(s) | 732 |
| BspPI | GGATC | 6 cut(s) | 8, 544, 806, 819, 870, 892 |
| BspT107I | GGYRCC | 1 cut(s) | 718 |
| BsrBI | CCGCTC | 1 cut(s) | 655 |
| BsrFI | RCCGGY | 3 cut(s) | 190, 214, 715 |
| BsrI | ACTGG | 3 cut(s) | 1057, 1109, 1330 |
| BssAI | RCCGGY | 3 cut(s) | 190, 214, 715 |
| BssECI | CCNNGG | 4 cut(s) | 272, 924, 1186, 1187 |
| BssMI | GATC | 9 cut(s) | 13, 536, 740, 811, 862, 897, 970, 1042, 1264 |
| BssNI | GRCGYC | 1 cut(s) | 282 |
| BssT1I | CCWWGG | 2 cut(s) | 272, 924 |
| Bst2UI | CCWGG | 2 cut(s) | 809, 1188 |
| Bst4CI | ACNGT | 6 cut(s) | 298, 551, 637, 782, 1406, 1435 |
| BstACI | GRCGYC | 1 cut(s) | 282 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1307 |
| BstC8I | GCNNGC | 1 cut(s) | 556 |
| BstDEI | CTNAG | 5 cut(s) | 737, 761, 789, 1268, 1476 |
| BstDSI | CCRYGG | 1 cut(s) | 924 |
| BstF5I | GGATG | 3 cut(s) | 399, 895, 1258 |
| BstH2I | RGCGCY | 3 cut(s) | 833, 1299, 1332 |
| BstHHI | GCGC | 3 cut(s) | 832, 1298, 1331 |
| BstKTI | GATC | 9 cut(s) | 16, 539, 743, 814, 865, 900, 973, 1045, 1267 |
| BstMBI | GATC | 9 cut(s) | 13, 536, 740, 811, 862, 897, 970, 1042, 1264 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 74, 77, 196, 246, 727, 1307 |
| BstNI | CCWGG | 2 cut(s) | 809, 1188 |
| BstSCI | CCNGG | 2 cut(s) | 807, 1186 |
| BstSFI | CTRYAG | 1 cut(s) | 728 |
| BstV1I | GCAGC | 2 cut(s) | 752, 1285 |
| BstV2I | GAAGAC | 1 cut(s) | 285 |
| BstX2I | RGATCY | 5 cut(s) | 13, 536, 811, 897, 970 |
| BstYI | RGATCY | 5 cut(s) | 13, 536, 811, 897, 970 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1476 |
| BsuI | GTATCC | 1 cut(s) | 155 |
| BsuRI | GGCC | 1 cut(s) | 715 |
| BtgI | CCRYGG | 1 cut(s) | 924 |
| BtrI | CACGTC | 1 cut(s) | 1369 |
| BtsCI | GGATG | 3 cut(s) | 399, 895, 1258 |
| BtsI | GCAGTG | 2 cut(s) | 588, 616 |
| BtsIMutI | CAGTG | 3 cut(s) | 588, 616, 1210 |
| Cac8I | GCNNGC | 1 cut(s) | 556 |
| CaiI | CAGNNNCTG | 2 cut(s) | 736, 796 |
| CfoI | GCGC | 3 cut(s) | 832, 1298, 1331 |
| Cfr10I | RCCGGY | 3 cut(s) | 190, 214, 715 |
| Cfr13I | GGNCC | 1 cut(s) | 785 |
| CseI | GACGC | 2 cut(s) | 205, 238 |
| Csp6I | GTAC | 2 cut(s) | 629, 1060 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 606, 641 |
| CviAII | CATG | 4 cut(s) | 286, 648, 769, 925 |
| CviQI | GTAC | 2 cut(s) | 629, 1060 |
| DdeI | CTNAG | 5 cut(s) | 737, 761, 789, 1268, 1476 |
| DpnI | GATC | 9 cut(s) | 15, 538, 742, 813, 864, 899, 972, 1044, 1266 |
| DpnII | GATC | 9 cut(s) | 13, 536, 740, 811, 862, 897, 970, 1042, 1264 |
| DraIII | CACNNNGTG | 1 cut(s) | 298 |
| EciI | GGCGGA | 1 cut(s) | 1171 |
| Eco130I | CCWWGG | 2 cut(s) | 272, 924 |
| Eco32I | GATATC | 2 cut(s) | 355, 568 |
| Eco47I | GGWCC | 1 cut(s) | 785 |
| Eco47III | AGCGCT | 1 cut(s) | 831 |
| Eco57I | CTGAAG | 1 cut(s) | 987 |
| Eco81I | CCTNAGG | 1 cut(s) | 1476 |
| EcoRII | CCWGG | 2 cut(s) | 807, 1186 |
| EcoRV | GATATC | 2 cut(s) | 355, 568 |
| EcoT14I | CCWWGG | 2 cut(s) | 272, 924 |
| ErhI | CCWWGG | 2 cut(s) | 272, 924 |
| FaeI | CATG | 4 cut(s) | 289, 651, 772, 928 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 35 |
| FaqI | GGGAC | 2 cut(s) | 1169, 1204 |
| FatI | CATG | 4 cut(s) | 285, 647, 768, 924 |
| FauNDI | CATATG | 2 cut(s) | 913, 1039 |
| FbaI | TGATCA | 1 cut(s) | 1042 |
| Fnu4HI | GCNGC | 8 cut(s) | 69, 78, 81, 165, 656, 766, 1299, 1353 |
| FokI | GGATG | 3 cut(s) | 406, 902, 1265 |
| Fsp4HI | GCNGC | 8 cut(s) | 69, 78, 81, 165, 656, 766, 1299, 1353 |
| GlaI | GCGC | 3 cut(s) | 831, 1297, 1330 |
| GluI | GCNGC | 8 cut(s) | 69, 78, 81, 165, 656, 766, 1299, 1353 |
| GsaI | CCCAGC | 1 cut(s) | 1037 |
| GsuI | CTGGAG | 1 cut(s) | 1151 |
| HaeII | RGCGCY | 3 cut(s) | 833, 1299, 1332 |
| HaeIII | GGCC | 1 cut(s) | 715 |
| HapII | CCGG | 6 cut(s) | 191, 215, 391, 716, 857, 1293 |
| HgaI | GACGC | 2 cut(s) | 205, 238 |
| HhaI | GCGC | 3 cut(s) | 832, 1298, 1331 |
| Hin1I | GRCGYC | 1 cut(s) | 282 |
| Hin1II | CATG | 4 cut(s) | 289, 651, 772, 928 |
| Hin6I | GCGC | 3 cut(s) | 830, 1296, 1329 |
| HinP1I | GCGC | 3 cut(s) | 830, 1296, 1329 |
| HincII | GTYRAC | 1 cut(s) | 1438 |
| HindII | GTYRAC | 1 cut(s) | 1438 |
| HinfI | GANTC | 9 cut(s) | 206, 446, 460, 503, 596, 614, 733, 1235, 1471 |
| HpaI | GTTAAC | 1 cut(s) | 1438 |
| HpaII | CCGG | 6 cut(s) | 191, 215, 391, 716, 857, 1293 |
| HphI | GGTGA | 5 cut(s) | 205, 229, 394, 784, 1132 |
| Hpy166II | GTNNAC | 4 cut(s) | 785, 1431, 1438, 1484 |
| Hpy188I | TCNGA | 6 cut(s) | 333, 667, 738, 762, 792, 1531 |
| Hpy188III | TCNNGA | 6 cut(s) | 8, 127, 391, 1171, 1346, 1475 |
| Hpy8I | GTNNAC | 4 cut(s) | 785, 1431, 1438, 1484 |
| Hpy99I | CGWCG | 4 cut(s) | 128, 144, 239, 455 |
| HpyAV | CCTTC | 2 cut(s) | 29, 317 |
| HpyCH4III | ACNGT | 6 cut(s) | 298, 551, 637, 782, 1406, 1435 |
| HpyCH4IV | ACGT | 4 cut(s) | 282, 406, 1368, 1486 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 74, 77, 196, 246, 727, 1307 |
| HpyF3I | CTNAG | 5 cut(s) | 737, 761, 789, 1268, 1476 |
| HpySE526I | ACGT | 4 cut(s) | 282, 406, 1368, 1486 |
| Hsp92I | GRCGYC | 1 cut(s) | 282 |
| Hsp92II | CATG | 4 cut(s) | 289, 651, 772, 928 |
| HspAI | GCGC | 3 cut(s) | 830, 1296, 1329 |
| Kpn2I | TCCGGA | 1 cut(s) | 390 |
| Ksp22I | TGATCA | 1 cut(s) | 1042 |
| KspAI | GTTAAC | 1 cut(s) | 1438 |
| Kzo9I | GATC | 9 cut(s) | 13, 536, 740, 811, 862, 897, 970, 1042, 1264 |
| LmnI | GCTCC | 4 cut(s) | 187, 294, 652, 1377 |
| Lsp1109I | GCAGC | 2 cut(s) | 752, 1285 |
| LweI | GCATC | 2 cut(s) | 880, 1339 |
| MaeII | ACGT | 4 cut(s) | 282, 406, 1368, 1486 |
| MaeIII | GTNAC | 4 cut(s) | 181, 193, 433, 639 |
| MalI | GATC | 9 cut(s) | 15, 538, 742, 813, 864, 899, 972, 1044, 1266 |
| MbiI | CCGCTC | 1 cut(s) | 655 |
| MboI | GATC | 9 cut(s) | 13, 536, 740, 811, 862, 897, 970, 1042, 1264 |
| MboII | GAAGA | 8 cut(s) | 14, 23, 80, 290, 332, 787, 980, 1437 |
| MfeI | CAATTG | 3 cut(s) | 200, 817, 874 |
| MflI | RGATCY | 5 cut(s) | 13, 536, 811, 897, 970 |
| MlyI | GAGTC | 3 cut(s) | 215, 497, 1244 |
| MmeI | TCCRAC | 2 cut(s) | 867, 1509 |
| MroI | TCCGGA | 1 cut(s) | 390 |
| MseI | TTAA | 4 cut(s) | 930, 1413, 1437, 1509 |
| MslI | CAYNNNNRTG | 3 cut(s) | 60, 646, 1362 |
| MspI | CCGG | 6 cut(s) | 191, 215, 391, 716, 857, 1293 |
| MspR9I | CCNGG | 2 cut(s) | 809, 1188 |
| MunI | CAATTG | 3 cut(s) | 200, 817, 874 |
| Mva1269I | GAATGC | 1 cut(s) | 1492 |
| MvaI | CCWGG | 2 cut(s) | 809, 1188 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 74, 77, 196, 246, 727, 1307 |
| NcoI | CCATGG | 1 cut(s) | 924 |
| NdeI | CATATG | 2 cut(s) | 913, 1039 |
| NdeII | GATC | 9 cut(s) | 13, 536, 740, 811, 862, 897, 970, 1042, 1264 |
| NlaIII | CATG | 4 cut(s) | 289, 651, 772, 928 |
| NlaIV | GGNNCC | 3 cut(s) | 189, 720, 813 |
| NmuCI | GTSAC | 3 cut(s) | 181, 193, 639 |
| OliI | CACNNNNGTG | 1 cut(s) | 60 |
| PasI | CCCWGGG | 1 cut(s) | 1187 |
| PctI | GAATGC | 1 cut(s) | 1492 |
| PfeI | GAWTC | 6 cut(s) | 446, 460, 596, 614, 733, 1471 |
| PflFI | GACNNNGTC | 1 cut(s) | 637 |
| PfoI | TCCNGGA | 1 cut(s) | 807 |
| PkrI | GCNGC | 8 cut(s) | 70, 79, 82, 166, 657, 767, 1300, 1354 |
| PleI | GAGTC | 3 cut(s) | 214, 497, 1243 |
| PpsI | GAGTC | 3 cut(s) | 214, 497, 1243 |
| PsiI | TTATAA | 1 cut(s) | 695 |
| Psp6I | CCWGG | 2 cut(s) | 807, 1186 |
| PspFI | CCCAGC | 1 cut(s) | 1033 |
| PspGI | CCWGG | 2 cut(s) | 807, 1186 |
| PspN4I | GGNNCC | 3 cut(s) | 189, 720, 813 |
| PspPI | GGNCC | 1 cut(s) | 785 |
| PstI | CTGCAG | 1 cut(s) | 732 |
| PstNI | CAGNNNCTG | 2 cut(s) | 736, 796 |
| PsuI | RGATCY | 5 cut(s) | 13, 536, 811, 897, 970 |
| PsyI | GACNNNGTC | 1 cut(s) | 637 |
| RsaI | GTAC | 2 cut(s) | 630, 1061 |
| RsaNI | GTAC | 2 cut(s) | 629, 1060 |
| RseI | CAYNNNNRTG | 3 cut(s) | 60, 646, 1362 |
| SaqAI | TTAA | 4 cut(s) | 930, 1413, 1437, 1509 |
| SatI | GCNGC | 8 cut(s) | 69, 78, 81, 165, 656, 766, 1299, 1353 |
| Sau3AI | GATC | 9 cut(s) | 13, 536, 740, 811, 862, 897, 970, 1042, 1264 |
| Sau96I | GGNCC | 1 cut(s) | 785 |
| SchI | GAGTC | 3 cut(s) | 215, 497, 1244 |
| ScrFI | CCNGG | 2 cut(s) | 809, 1188 |
| SfaNI | GCATC | 2 cut(s) | 880, 1339 |
| SfcI | CTRYAG | 1 cut(s) | 728 |
| SinI | GGWCC | 1 cut(s) | 785 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 60, 646, 1362 |
| SmlI | CTYRAG | 1 cut(s) | 260 |
| SmoI | CTYRAG | 1 cut(s) | 260 |
| SsiI | CCGC | 9 cut(s) | 58, 69, 78, 81, 164, 655, 1156, 1352, 1392 |
| SspI | AATATT | 1 cut(s) | 481 |
| StyD4I | CCNGG | 2 cut(s) | 807, 1186 |
| StyI | CCWWGG | 2 cut(s) | 272, 924 |
| TaaI | ACNGT | 6 cut(s) | 298, 551, 637, 782, 1406, 1435 |
| TaiI | ACGT | 4 cut(s) | 285, 409, 1371, 1489 |
| TaqI | TCGA | 3 cut(s) | 91, 453, 937 |
| TauI | GCSGC | 6 cut(s) | 71, 80, 83, 167, 658, 1355 |
| TfiI | GAWTC | 6 cut(s) | 446, 460, 596, 614, 733, 1471 |
| Tru1I | TTAA | 4 cut(s) | 930, 1413, 1437, 1509 |
| Tru9I | TTAA | 4 cut(s) | 930, 1413, 1437, 1509 |
| TscAI | CASTG | 3 cut(s) | 595, 616, 1210 |
| TseFI | GTSAC | 3 cut(s) | 181, 193, 639 |
| TseI | GCWGC | 2 cut(s) | 765, 1298 |
| Tsp45I | GTSAC | 3 cut(s) | 181, 193, 639 |
| TspDTI | ATGAA | 2 cut(s) | 36, 1083 |
| TspGWI | ACGGA | 4 cut(s) | 112, 200, 439, 1486 |
| TspRI | CASTG | 3 cut(s) | 595, 616, 1210 |
| Tth111I | GACNNNGTC | 1 cut(s) | 637 |
| VpaK11BI | GGWCC | 1 cut(s) | 785 |
| XapI | RAATTY | 1 cut(s) | 932 |
| ZraI | GACGTC | 1 cut(s) | 283 |