pycom10g05470

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0010976
Physical Location & Seq
Reverse (-)
5790429 .. 5793002
2574 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g05470.1

Sequence Viewer

Length: 2574 bp
ATGGCTCTCCTCCTGGTCCTTCTTTTCTCCCTCCTTGCCTCCCCCACCTTCGTCCTCTCAGCGTCCTCCCCACCATTTACTCCCCAAGATAACTTCCTCATCGATTGTGGCGCCACCAACAAGGCCACCCTCCCCGATGGGAGAGCCTTCAAAACTGAATCAGAATCCACGCAGCAGTTGAAGGCAGACGATGACAACAAGGTCTTTGTCGACAAGGCAGACGTGCCTTCCCCTCTTTATTTGACTGCCAGGATTTTCAAGAGCGATGCCATTTACACGTTCCACATGGCAAGGCCGGGATGGCATTGGATTCGTCTTCATTTCTACCCACTAAGCAACTCGGTGTTCGATCTTCAAAAGGCTACATTCAATGTCATGACGCAAAAGTACACTCTGCTGCACAGCTTCAATGTGGACGAGCACAAGAACAACACCAAGAACCAAATTTTTATGAAGGAGTACCTTTTGAACGTAACCGAGCAGCAATTCTCCATCAAGTTCTCTCCCATGAAGAACTCTGCGGCGTTCATCAATGCCATTGAGGTGGTTTCAGCTCCTGATAATTTGATCACCGACACGGCCAACAACCTTCAACCGGCGAGCCAATTTCAAGGGCTGTCCAAATTCGGGTACGAAACAATGTACAGGCTTAACATGGGAGGACCCCTTGTCACATCCGCAAATGACACATTAGGACGCTCTTGGTTGCCCGATGACGCATACATCAAGTCCAAAAATATGGCCAAGGCTACGTCGGTTGGGACTAGTACGGTCAAGTATCCCGATGGACTAACCCCCCAAATCGCGCCACCAACTATTTATGCAACCGTCGTGCAAATGGCTGATGCTATTGTGAGCAATCAAAATTTCAACATAACATGGAATTTCCAGGCGGAAAATGCATTTGCCTACTTAATTCGATTACATTTTTGTGACATTGTAAGCAAGTCGCTTGGTAACCTCTACTTCAATGTGTACATTAACGGGAACATGGCGATAAGCGATTTGGATTTGTCACACACTGTCAACGGTTTGGCAATTCCGTACTATAAGGACATTGTCGTAAATGCTTCCTTGGTATCCGATGGGTTATCAGTCCAGATTGGTCCTTCAAGAATGGACAATGGTGCACCAAATGCCATTTTGAATGGTTTGGAGGTGATGAAACTAAGCAATTCTGTGGACAGTTTGGATGGTGAATTCGGGGTTGATGGAAAGAAAGTGGAAACAGGCGGCAGCGGGCCTCACAAGGGTGCGGTGGCTGCAGTTGGGTTTGGTTTGATGTTCGGGGCCTTCGTAGGGCTTGGAGCAATGGTTTACAAATGGCGAAAGAGACCTCAAGATTGGCAAAAGAGGAACAGCTTCTCTTCTTGGCTACTTCCTGTCCATGCCAGTGACACTAGCTTCATGTCGAGCAAGACTTCAAGCAACATGTACAACTCCACTTTAGGCCTTGGCCGCTACTTCACTTTTCAGGAGTTACAAGAAGCCACCAACAACTTTGACTCGAGTAAGATCATTGGTGTTGGTGGATTCGGCAATGTGTATCTTTGCGTTATTGATGACGGGACAAGCGTGGCTGTCAAGCGAGGCAACCCCCAATCCGAACAAGGCATTACAGAGTTTCAGACAGAGATCCAGATGTTGTCCAAGTTAAGGCACAGGCATTTGGTGTCACTAATTGGCTACTGTGACGAAAACTCAGAAATGATCTTAGTTTATGAGTACATGTCTAATGGACCCTTCCGCGATCATCTCTATGGCAAGGACTTGCCTCCGTTGTCATGGAAGCAAAGACTAGAAATCTGTATCGGGGCAGCTCGCGGGCTTCATTACCTTCACACTGGAACAACACAAGGCATTATTCACCGCGACGTTAAAACAACTAACATTTTGCTTGATGATCAACTCACTGCCAAGGTTGCTGATTTCGGTCTTTCCAAAGACGCGACCATGGGACAGAACTACGTCAGCACTGCCGTGAAGGGAAGCTTCGGGTACTTAGACCCTGAATATTTTAGGAGGCAGCAGTTGACAGACAAGTCGGATGTGTACTCGTTTGGGGTTGTTTTACTTGAAGCACTGTGTGCAAGGCCTGCTATAGACCCGGCACTTCCGAGGGAGCAAGTGAACTTGGCTGACTGGGGAATGCAGTGGAAGAGGAAGGGACTTCTCGAAAAGATCATTGATCCTCTCCTCGTTGGATCCATTGACCCTGAATCAATGAAGAAGTTTGGCGAGGCTGCAGAGAAGTGTTTGGAAGAACATGGTGTGGACAGGCCCACAATGGGAGATGTGTTGTGGAACTTGGAGTATGCTCTGCAACTTCAAGAGGCATTCACTCAAGGAAAGCCTGAGGATGAAAGTAGCAGCGTTGTGCTGCCTTCCACTGAGGTCGATGCCGCTGCGACATCCCCTGCTGCTGCTGCGATTCCTCCCCCTAGTACCCCAACTCCCGCTATCCGCCCGGCTACCATCCCTGAAGGCGACAAGGGTTCAACTAATGCTCACCCCATTAATGACCACTCGGGAACTGATATATTGGCTCAATTTTCCAATCTAAATGGTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase_Tyr

Protein Analysis

858

Amino Acids

94.28

Weight (kDa)

5.63

Isoelectric Point (pI)

33.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 33 - 179 4.6e-06 Malectin domain
Malectin_like PF12819 34 - 389 3.1e-26 Malectin-like domain
Malectin PF11721 214 - 365 1.3e-08 Malectin domain
Pkinase PF00069 503 - 764 9.3e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 504 - 696 1.7e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010976)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G21480 AT4G39110
fragaria_vesca FvH4_2g09700
malus_domestica MD05G1060800.v1.1 MD10G1068600.v1.1
prunus_persica Prupe.8G090600_v2.0.a1
pyrus_communis pycom10g05470
rosa_chinensis RchiOBHm_Chr6g0266011
rosa_laevigata RLG00000014135 RLG00000014136 RLG00000014138
rosa_multiflora Rmu_sc0000776.1_g000006
rosa_roxburghii Rroxscaffold_174G00435080 Rroxscaffold_7G00202100
rosa_rugosa Rorug06G0022500
rosa_samantha Rh6AG143700 Rh6BG144000 Rh6CG140700 Rh6DG128300
rosa_wichuraiana Rw6G012420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 200, 2041
AccB1I GGYRCC 1 cut(s) 110
AccI GTMKAC 1 cut(s) 210
AccII CGCG 5 cut(s) 806, 1749, 1824, 1872, 1949
AclWI GGATC 4 cut(s) 1630, 2183, 2199, 2212
AcoI YGGCCR 3 cut(s) 579, 741, 1456
AcsI RAATTY 5 cut(s) 444, 623, 865, 883, 1199
AcuI CTGAAG 1 cut(s) 2502
AcyI GRCGYC 1 cut(s) 111
AdeI CACNNNGTG 1 cut(s) 2087
AfiI CCNNNNNNNGG 6 cut(s) 595, 627, 1250, 1299, 1656, 2288
AflIII ACRYGT 3 cut(s) 276, 1431, 1728
AhdI GACNNNNNGTC 1 cut(s) 668
AhlI ACTAGT 1 cut(s) 764
AjiI CACGTC 1 cut(s) 223
AjnI CCWGG 3 cut(s) 12, 248, 888
AleI CACNNNNGTG 2 cut(s) 1251, 1979
AluBI AGCT 6 cut(s) 405, 554, 1362, 1404, 1820, 1992
AluI AGCT 6 cut(s) 405, 554, 1362, 1404, 1820, 1992
Alw21I GWGCWC 2 cut(s) 423, 1132
Alw26I GTCTC 1 cut(s) 1327
Alw44I GTGCAC 1 cut(s) 1128
AlwI GGATC 4 cut(s) 1630, 2183, 2199, 2212
AlwNI CAGNNNCTG 1 cut(s) 557
Ama87I CYCGRG 2 cut(s) 1507, 2527
ApaLI GTGCAC 1 cut(s) 1128
ApoI RAATTY 5 cut(s) 444, 623, 865, 883, 1199
AseI ATTAAT 1 cut(s) 2517
Asp700I GAANNNNTTC 1 cut(s) 1361
AspLEI GCGC 2 cut(s) 113, 808
AspS9I GGNCC 7 cut(s) 16, 662, 1106, 1241, 1290, 1739, 2280
AsuC2I CCSGG 3 cut(s) 297, 2108, 2468
AsuHPI GGTGA 5 cut(s) 562, 1171, 1208, 1859, 2501
AvaI CYCGRG 2 cut(s) 1507, 2527
AvaII GGWCC 4 cut(s) 16, 662, 1106, 1739
AxyI CCTNAGG 1 cut(s) 2355
BaeGI GKGCMC 1 cut(s) 1132
BalI TGGCCA 1 cut(s) 743
BamHI GGATCC 1 cut(s) 2204
BanI GGYRCC 1 cut(s) 110
BbsI GAAGAC 1 cut(s) 308
Bbv12I GWGCWC 2 cut(s) 423, 1132
BccI CCATC 8 cut(s) 131, 294, 500, 779, 1079, 1187, 1205, 2483
BceAI ACGGC 2 cut(s) 594, 1964
BcgI CGANNNNNNTGC 4 cut(s) 293, 327, 2387, 2421
BciT130I CCWGG 3 cut(s) 14, 250, 890
BciVI GTATCC 2 cut(s) 789, 1090
BclI TGATCA 2 cut(s) 567, 1903
BcnI CCSGG 3 cut(s) 297, 2108, 2468
BcoDI GTCTC 1 cut(s) 1327
BcuI ACTAGT 1 cut(s) 764
BfaI CTAG 4 cut(s) 765, 1401, 1799, 2442
BfmI CTRYAG 3 cut(s) 1263, 2100, 2244
BfoI RGCGCY 1 cut(s) 114
BfuI GTATCC 2 cut(s) 789, 1090
BglI GCCNNNNNGGC 1 cut(s) 301
Bme1390I CCNGG 6 cut(s) 14, 250, 297, 890, 2108, 2468
Bme18I GGWCC 4 cut(s) 16, 662, 1106, 1739
BmeRI GACNNNNNGTC 1 cut(s) 668
BmeT110I CYCGRG 2 cut(s) 1507, 2527
BmgBI CACGTC 1 cut(s) 223
BmgT120I GGNCC 7 cut(s) 16, 662, 1106, 1241, 1290, 1739, 2280
BmiI GGNNCC 5 cut(s) 112, 664, 1291, 1741, 2206
BmrFI CCNGG 6 cut(s) 14, 250, 297, 890, 2108, 2468
BmrI ACTGGG 1 cut(s) 2152
BmsI GCATC 3 cut(s) 256, 835, 2389
BmuI ACTGGG 1 cut(s) 2152
BpiI GAAGAC 1 cut(s) 308
BpuEI CTTGAG 2 cut(s) 1323, 2328
BpuMI CCSGG 3 cut(s) 297, 2108, 2468
Bsa29I ATCGAT 1 cut(s) 102
BsaHI GRCGYC 1 cut(s) 111
BsaI GGTCTC 1 cut(s) 1327
BsaJI CCNNGG 6 cut(s) 744, 1074, 1453, 1917, 1953, 2117
BsaXI ACNNNNNCTCC 4 cut(s) 1299, 1329, 2437, 2467
Bsc4I CCNNNNNNNGG 6 cut(s) 595, 627, 1250, 1299, 1656, 2288
Bse118I RCCGGY 1 cut(s) 595
Bse1I ACTGG 3 cut(s) 1392, 1849, 2147
Bse21I CCTNAGG 1 cut(s) 2355
Bse3DI GCAATG 2 cut(s) 1317, 1546
BseBI CCWGG 3 cut(s) 14, 250, 890
BseCI ATCGAT 1 cut(s) 102
BseDI CCNNGG 6 cut(s) 744, 1074, 1453, 1917, 1953, 2117
BseGI GGATG 7 cut(s) 305, 674, 1198, 2053, 2365, 2411, 2475
BseLI CCNNNNNNNGG 6 cut(s) 595, 627, 1250, 1299, 1656, 2288
BseMI GCAATG 2 cut(s) 1317, 1546
BseMII CTCAG 4 cut(s) 72, 1716, 2346, 2382
BseNI ACTGG 3 cut(s) 1392, 1849, 2147
BseRI GAGGAG 1 cut(s) 2186
BseSI GKGCMC 1 cut(s) 1132
BsgI GTGCAG 1 cut(s) 383
Bsh1236I CGCG 5 cut(s) 806, 1749, 1824, 1872, 1949
BshNI GGYRCC 1 cut(s) 110
BshVI ATCGAT 1 cut(s) 102
BsiHKAI GWGCWC 2 cut(s) 423, 1132
BsiHKCI CYCGRG 2 cut(s) 1507, 2527
BsiSI CCGG 4 cut(s) 296, 596, 2108, 2468
BslFI GGGAC 4 cut(s) 775, 1582, 1971, 2181
BslI CCNNNNNNNGG 6 cut(s) 595, 627, 1250, 1299, 1656, 2288
BsmAI GTCTC 1 cut(s) 1327
BsmFI GGGAC 4 cut(s) 775, 1582, 1971, 2181
BsmI GAATGC 2 cut(s) 2154, 2336
Bso31I GGTCTC 1 cut(s) 1327
BsoBI CYCGRG 2 cut(s) 1507, 2527
Bsp1286I GDGCHC 2 cut(s) 423, 1132
Bsp1407I TGTACA 3 cut(s) 642, 975, 1434
Bsp19I CCATGG 1 cut(s) 1953
BspCNI CTCAG 4 cut(s) 71, 1715, 2347, 2383
BspDI ATCGAT 1 cut(s) 102
BspFNI CGCG 5 cut(s) 806, 1749, 1824, 1872, 1949
BspHI TCATGA 1 cut(s) 375
BspLI GGNNCC 5 cut(s) 112, 664, 1291, 1741, 2206
BspMAI CTGCAG 2 cut(s) 1267, 2248
BspPI GGATC 4 cut(s) 1630, 2183, 2199, 2212
BspT107I GGYRCC 1 cut(s) 110
BspTNI GGTCTC 1 cut(s) 1327
BsrDI GCAATG 2 cut(s) 1317, 1546
BsrFI RCCGGY 1 cut(s) 595
BsrGI TGTACA 3 cut(s) 642, 975, 1434
BsrI ACTGG 3 cut(s) 1392, 1849, 2147
BssAI RCCGGY 1 cut(s) 595
BssECI CCNNGG 6 cut(s) 744, 1074, 1453, 1917, 1953, 2117
BssNI GRCGYC 1 cut(s) 111
BssT1I CCWWGG 5 cut(s) 744, 1074, 1453, 1917, 1953
Bst2UI CCWGG 3 cut(s) 14, 250, 890
Bst4CI ACNGT 7 cut(s) 772, 829, 1024, 1031, 1187, 1691, 2085
Bst6I CTCTTC 2 cut(s) 1372, 2153
BstACI GRCGYC 1 cut(s) 111
BstAPI GCANNNNNTGC 3 cut(s) 1136, 2087, 2096
BstAUI TGTACA 3 cut(s) 642, 975, 1434
BstC8I GCNNGC 5 cut(s) 601, 1241, 1822, 1826, 2097
BstDEI CTNAG 8 cut(s) 58, 332, 1169, 1702, 1714, 2002, 2355, 2391
BstDSI CCRYGG 1 cut(s) 1953
BstEII GGTNACC 1 cut(s) 956
BstF5I GGATG 7 cut(s) 305, 674, 1198, 2053, 2365, 2411, 2475
BstFNI CGCG 5 cut(s) 806, 1749, 1824, 1872, 1949
BstH2I RGCGCY 1 cut(s) 114
BstHHI GCGC 2 cut(s) 113, 808
BstMAI GTCTC 1 cut(s) 1327
BstMWI GCNNNNNNNGC 9 cut(s) 301, 899, 1136, 1262, 1458, 1922, 2087, 2096, 2426
BstNI CCWGG 3 cut(s) 14, 250, 890
BstNSI RCATGY 2 cut(s) 1435, 1732
BstPI GGTNACC 1 cut(s) 956
BstSCI CCNGG 6 cut(s) 12, 248, 295, 888, 2106, 2466
BstSFI CTRYAG 3 cut(s) 1263, 2100, 2244
BstSLI GKGCMC 1 cut(s) 1132
BstUI CGCG 5 cut(s) 806, 1749, 1824, 1872, 1949
BstV2I GAAGAC 1 cut(s) 308
BstX2I RGATCY 2 cut(s) 1635, 2204
BstXI CCANNNNNNTGG 2 cut(s) 544, 739
BstYI RGATCY 2 cut(s) 1635, 2204
Bsu15I ATCGAT 1 cut(s) 102
Bsu36I CCTNAGG 1 cut(s) 2355
BsuI GTATCC 2 cut(s) 789, 1090
BsuTUI ATCGAT 1 cut(s) 102
BtgI CCRYGG 1 cut(s) 1953
BtgZI GCGATG 1 cut(s) 279
BtrI CACGTC 1 cut(s) 223
BtsCI GGATG 7 cut(s) 305, 674, 1198, 2053, 2365, 2411, 2475
BtsI GCAGTG 3 cut(s) 1911, 1974, 2159
BtsIMutI CAGTG 8 cut(s) 1020, 1399, 1842, 1911, 1974, 2081, 2159, 2388
Cac8I GCNNGC 5 cut(s) 601, 1241, 1822, 1826, 2097
CaiI CAGNNNCTG 1 cut(s) 557
CciI TCATGA 1 cut(s) 375
CfoI GCGC 2 cut(s) 113, 808
Cfr10I RCCGGY 1 cut(s) 595
Cfr13I GGNCC 7 cut(s) 16, 662, 1106, 1241, 1290, 1739, 2280
ClaI ATCGAT 1 cut(s) 102
CseI GACGC 5 cut(s) 51, 388, 705, 725, 1955
DdeI CTNAG 8 cut(s) 58, 332, 1169, 1702, 1714, 2002, 2355, 2391
DinI GGCGCC 1 cut(s) 112
DraIII CACNNNGTG 1 cut(s) 2087
DrdI GACNNNNNNGTC 2 cut(s) 200, 2041
DriI GACNNNNNGTC 1 cut(s) 668
DseDI GACNNNNNNGTC 2 cut(s) 200, 2041
EaeI YGGCCR 3 cut(s) 579, 741, 1456
Eam1104I CTCTTC 2 cut(s) 1372, 2153
Eam1105I GACNNNNNGTC 1 cut(s) 668
EarI CTCTTC 2 cut(s) 1372, 2153
EciI GGCGGA 2 cut(s) 908, 2453
Eco130I CCWWGG 5 cut(s) 744, 1074, 1453, 1917, 1953
Eco147I AGGCCT 2 cut(s) 1452, 2095
Eco31I GGTCTC 1 cut(s) 1327
Eco47I GGWCC 4 cut(s) 16, 662, 1106, 1739
Eco57I CTGAAG 1 cut(s) 2502
Eco81I CCTNAGG 1 cut(s) 2355
Eco88I CYCGRG 2 cut(s) 1507, 2527
Eco91I GGTNACC 1 cut(s) 956
EcoO109I RGGNCCY 2 cut(s) 662, 1290
EcoO65I GGTNACC 1 cut(s) 956
EcoRI GAATTC 1 cut(s) 1199
EcoRII CCWGG 3 cut(s) 12, 248, 888
EcoT14I CCWWGG 5 cut(s) 744, 1074, 1453, 1917, 1953
EcoT22I ATGCAT 1 cut(s) 904
EgeI GGCGCC 1 cut(s) 112
EheI GGCGCC 1 cut(s) 112
ErhI CCWWGG 5 cut(s) 744, 1074, 1453, 1917, 1953
FalI AAGNNNNNCTT 2 cut(s) 1976, 2008
FaqI GGGAC 4 cut(s) 775, 1582, 1971, 2181
FauI CCCGC 3 cut(s) 1232, 1817, 2464
FbaI TGATCA 2 cut(s) 567, 1903
FblI GTMKAC 1 cut(s) 210
FokI GGATG 7 cut(s) 312, 661, 1205, 2060, 2372, 2398, 2462
FspBI CTAG 4 cut(s) 765, 1401, 1799, 2442
GlaI GCGC 2 cut(s) 112, 807
HaeII RGCGCY 1 cut(s) 114
HapII CCGG 4 cut(s) 296, 596, 2108, 2468
HgaI GACGC 5 cut(s) 51, 388, 705, 725, 1955
HhaI GCGC 2 cut(s) 113, 808
Hin1I GRCGYC 1 cut(s) 111
Hin6I GCGC 2 cut(s) 111, 806
HinP1I GCGC 2 cut(s) 111, 806
HincII GTYRAC 3 cut(s) 211, 1027, 2034
HindII GTYRAC 3 cut(s) 211, 1027, 2034
HindIII AAGCTT 1 cut(s) 1990
HinfI GANTC 7 cut(s) 158, 164, 310, 1505, 1533, 2219, 2431
HpaII CCGG 4 cut(s) 296, 596, 2108, 2468
HphI GGTGA 5 cut(s) 562, 1171, 1208, 1859, 2501
Hpy188I TCNGA 7 cut(s) 163, 1084, 1606, 1629, 1705, 2047, 2118
Hpy99I CGWCG 3 cut(s) 757, 833, 1877
HpyCH4III ACNGT 7 cut(s) 772, 829, 1024, 1031, 1187, 1691, 2085
HpyCH4IV ACGT 6 cut(s) 222, 278, 471, 752, 1875, 1968
HpyF10VI GCNNNNNNNGC 9 cut(s) 301, 899, 1136, 1262, 1458, 1922, 2087, 2096, 2426
HpyF3I CTNAG 8 cut(s) 58, 332, 1169, 1702, 1714, 2002, 2355, 2391
HpySE526I ACGT 6 cut(s) 222, 278, 471, 752, 1875, 1968
Hsp92I GRCGYC 1 cut(s) 111
HspAI GCGC 2 cut(s) 111, 806
KasI GGCGCC 1 cut(s) 110
Ksp22I TGATCA 2 cut(s) 567, 1903
LmnI GCTCC 3 cut(s) 559, 1307, 2122
LweI GCATC 3 cut(s) 256, 835, 2389
MaeI CTAG 4 cut(s) 765, 1401, 1799, 2442
MaeII ACGT 6 cut(s) 222, 278, 471, 752, 1875, 1968
MaeIII GTNAC 9 cut(s) 472, 670, 932, 956, 1014, 1394, 1479, 1674, 1691
MboII GAAGA 7 cut(s) 308, 344, 523, 1359, 2170, 2239, 2273
MflI RGATCY 2 cut(s) 1635, 2204
MhlI GDGCHC 2 cut(s) 423, 1132
MlsI TGGCCA 1 cut(s) 743
MluNI TGGCCA 1 cut(s) 743
Mly113I GGCGCC 1 cut(s) 111
MlyI GAGTC 1 cut(s) 1499
MmeI TCCRAC 2 cut(s) 2025, 2182
Mox20I TGGCCA 1 cut(s) 743
Mph1103I ATGCAT 1 cut(s) 904
MroXI GAANNNNTTC 1 cut(s) 1361
MscI TGGCCA 1 cut(s) 743
MseI TTAA 6 cut(s) 651, 914, 981, 1655, 1878, 2517
MslI CAYNNNNRTG 6 cut(s) 542, 930, 1251, 1392, 1758, 1979
Msp20I TGGCCA 1 cut(s) 743
MspA1I CMGCKG 2 cut(s) 1239, 2405
MspI CCGG 4 cut(s) 296, 596, 2108, 2468
MspR9I CCNGG 6 cut(s) 14, 250, 297, 890, 2108, 2468
Mva1269I GAATGC 2 cut(s) 2154, 2336
MvaI CCWGG 3 cut(s) 14, 250, 890
MvnI CGCG 5 cut(s) 806, 1749, 1824, 1872, 1949
MwoI GCNNNNNNNGC 9 cut(s) 301, 899, 1136, 1262, 1458, 1922, 2087, 2096, 2426
NarI GGCGCC 1 cut(s) 111
NciI CCSGG 3 cut(s) 297, 2108, 2468
NcoI CCATGG 1 cut(s) 1953
NlaIV GGNNCC 5 cut(s) 112, 664, 1291, 1741, 2206
NmuCI GTSAC 6 cut(s) 670, 932, 1014, 1394, 1674, 1691
NsiI ATGCAT 1 cut(s) 904
NspI RCATGY 2 cut(s) 1435, 1732
OliI CACNNNNGTG 2 cut(s) 1251, 1979
PaeR7I CTCGAG 1 cut(s) 1507
PagI TCATGA 1 cut(s) 375
PceI AGGCCT 2 cut(s) 1452, 2095
PciI ACATGT 2 cut(s) 1431, 1728
PcsI WCGNNNNNNNCGW 2 cut(s) 1293, 1572
PctI GAATGC 2 cut(s) 2154, 2336
PdmI GAANNNNTTC 1 cut(s) 1361
PfeI GAWTC 6 cut(s) 158, 164, 310, 1533, 2219, 2431
PflFI GACNNNGTC 1 cut(s) 1058
PleI GAGTC 1 cut(s) 1499
PluTI GGCGCC 1 cut(s) 114
PpsI GAGTC 1 cut(s) 1499
PpuMI RGGWCCY 1 cut(s) 662
PscI ACATGT 2 cut(s) 1431, 1728
PshBI ATTAAT 1 cut(s) 2517
Psp5II RGGWCCY 1 cut(s) 662
Psp6I CCWGG 3 cut(s) 12, 248, 888
PspEI GGTNACC 1 cut(s) 956
PspGI CCWGG 3 cut(s) 12, 248, 888
PspN4I GGNNCC 5 cut(s) 112, 664, 1291, 1741, 2206
PspPI GGNCC 7 cut(s) 16, 662, 1106, 1241, 1290, 1739, 2280
PspPPI RGGWCCY 1 cut(s) 662
PspXI VCTCGAGB 1 cut(s) 1507
PstI CTGCAG 2 cut(s) 1267, 2248
PstNI CAGNNNCTG 1 cut(s) 557
PsuI RGATCY 2 cut(s) 1635, 2204
PsyI GACNNNGTC 1 cut(s) 1058
RseI CAYNNNNRTG 6 cut(s) 542, 930, 1251, 1392, 1758, 1979
SalI GTCGAC 1 cut(s) 209
SaqAI TTAA 6 cut(s) 651, 914, 981, 1655, 1878, 2517
Sau96I GGNCC 7 cut(s) 16, 662, 1106, 1241, 1290, 1739, 2280
SchI GAGTC 1 cut(s) 1499
ScrFI CCNGG 6 cut(s) 14, 250, 297, 890, 2108, 2468
SduI GDGCHC 2 cut(s) 423, 1132
SfaNI GCATC 3 cut(s) 256, 835, 2389
SfcI CTRYAG 3 cut(s) 1263, 2100, 2244
SfoI GGCGCC 1 cut(s) 112
Sfr274I CTCGAG 1 cut(s) 1507
SinI GGWCC 4 cut(s) 16, 662, 1106, 1739
SlaI CTCGAG 1 cut(s) 1507
SmiMI CAYNNNNRTG 6 cut(s) 542, 930, 1251, 1392, 1758, 1979
SmlI CTYRAG 3 cut(s) 1338, 1507, 2343
SmoI CTYRAG 3 cut(s) 1338, 1507, 2343
SpeI ACTAGT 1 cut(s) 764
SseBI AGGCCT 2 cut(s) 1452, 2095
SspDI GGCGCC 1 cut(s) 110
SspI AATATT 1 cut(s) 2015
SspMI CTAG 4 cut(s) 765, 1401, 1799, 2442
StuI AGGCCT 2 cut(s) 1452, 2095
StyD4I CCNGG 6 cut(s) 12, 248, 295, 888, 2106, 2466
StyI CCWWGG 5 cut(s) 744, 1074, 1453, 1917, 1953
TaaI ACNGT 7 cut(s) 772, 829, 1024, 1031, 1187, 1691, 2085
TaiI ACGT 6 cut(s) 225, 281, 474, 755, 1878, 1971
TaqI TCGA 8 cut(s) 102, 210, 348, 919, 1412, 1508, 2175, 2397
TaqII GACCGA 1 cut(s) 1922
TatI WGTACW 6 cut(s) 387, 642, 975, 1434, 1725, 2052
TauI GCSGC 4 cut(s) 524, 1236, 1461, 2405
TfiI GAWTC 6 cut(s) 158, 164, 310, 1533, 2219, 2431
Tru1I TTAA 6 cut(s) 651, 914, 981, 1655, 1878, 2517
Tru9I TTAA 6 cut(s) 651, 914, 981, 1655, 1878, 2517
TscAI CASTG 8 cut(s) 1027, 1399, 1849, 1918, 1981, 2088, 2159, 2395
TseFI GTSAC 6 cut(s) 670, 932, 1014, 1394, 1674, 1691
Tsp45I GTSAC 6 cut(s) 670, 932, 1014, 1394, 1674, 1691
TspDTI ATGAA 9 cut(s) 308, 467, 517, 524, 1178, 1396, 1820, 2240, 2376
TspGWI ACGGA 2 cut(s) 1032, 1767
TspRI CASTG 8 cut(s) 1027, 1399, 1849, 1918, 1981, 2088, 2159, 2395
Tth111I GACNNNGTC 1 cut(s) 1058
VneI GTGCAC 1 cut(s) 1128
VpaK11BI GGWCC 4 cut(s) 16, 662, 1106, 1739
VspI ATTAAT 1 cut(s) 2517
XapI RAATTY 5 cut(s) 444, 623, 865, 883, 1199
XceI RCATGY 2 cut(s) 1435, 1732
XhoI CTCGAG 1 cut(s) 1507
XmiI GTMKAC 1 cut(s) 210
XmnI GAANNNNTTC 1 cut(s) 1361
XspI CTAG 4 cut(s) 765, 1401, 1799, 2442
Zsp2I ATGCAT 1 cut(s) 904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.