Rroxscaffold_174G00435080

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000174
OG0010976
Physical Location & Seq
Forward (+)
10270 .. 12878
2609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_174G00435080.1

Sequence Viewer

Length: 2529 bp
ATGGAGATAGAAAAGACACCAAAAGAACCCAAAAAGAAGTATCTTTTTCTATCCTCCTTGCCATCATTATCATCATCATTAACGTCGAGATACATGATGGCTATCCTCCTGGTCTTTGTCTACGCACTTCTCTACAACCCCACCCTAGTCTTCTCTGACCCTTCCCCCACCACCTTCACCCCCCAAGACAACTTCCTCATCAACTGCGGTGCTGCAAGCGCTCCCACACTACCCGATGGAAGGACCTTCAAGACTGATTCACAATCATCGCAACATTTGAAAGCAAATGATGATAACAAGGTGTCTGATGACAAGGCAGATGTGCCTTCTCCTCTTTACAAAACGGCAAGGATTTTCACAAGTGAAGCCACTTATACGTTCCACATGGGAAGTCCTGGGTGGCATTGGGTTCGCCTCTATTTCTATCCCATTCAAAATTCTGTGTCTGATCTTCAGAAGGCAACTTTCAATGTCATGACAGATAAGTACACTTTGCTCCATAGCTTCAATTTCAATGAGGCCGCTAACAACAACACCATCAAAGTTGTTCGCAAGGAGTACCTTCTCAACGTGACCGAGCAGCAATTCTCGATCAAGTTCTCTCCCCAGAAGAACTCTGCGGCGTTCATCAATGCAATTGAGGTGGTTTCAGCTCCTGATTATCTCATCTCGGACACGGCTAACAACCTTCAGCCAGTGAGCCAGCTCCAGGGACGGTTCTGGTTGCCGGACGAGCCATACATCAAGTCCAAGAACATGGCCCAAAGTGCCAAGGTTGAAACCAAAACTATCAAGTATCCTCAAGGGCTCACACCCCAAATAGCTCCACCAATAGTTTATGCAACTGCTGCGCACATGGAAGATGCAGCTGTCAGCAATCAAAAGTTCAATGTGACATGGGACTTTCAGGCTGAAAATGCATATGGTTACTTGATCCGGTTGCATTTCTGCGACATTGTGAGCAAAACACTTGGTAATCTTTACTTCAATGTCTACATCAATGGGCAGATGGCAATAAGTGATTTGGATTTGTCACAAACCGTGAACGGTTTGGCAATTCCATTCTACAAGGACATTGTGGTCAACTCTTCATTGATAAAAGACGTGCTTTCAATCCAGATTGGTCCGTCTAAATTGGGGAGTGGCGCTCAGGATGCCATTCTAAATGGTTTGGAGGTTATGAAAATAAGCAATTCTGTTAATAGTTTGGATGGAGAGTTCGGAGTCGATGGAAAAGAATCAAAAGATAGCAGCGGAGGTGTTCACAAGGGAGCGGTGGCTGCAGTCGGATTTGGTTTGATGTTTGGAGCCTTTATTGGACTTGGGGCAATGGTGTACAAATGGAAGAAGAGACCTCAAGATTGGCAGAAAAGGAACAGCTTCTCTTCTTGGTTACTTCCTGTACATGCTGGAGACAGCAGTTTTATGTCAAGCAAGAACTCAGTGGGAAAGAGCATGTACTCTTCCTCTATGGGCCTTGGCCGATTCTTCTCTCTCTCGGAGTTACAGGAAGCTACCAACAATTTCGACTCGAACAAAATCATTGGTGTTGGTGGATTTGGCAATGTGTATCTTGGCGTGATTGATGATGGGATTAGTGTTGCTGTCAAGAGAGGAAATCCACAATCTGAACAGGGGATTACAGAGTTCCAAACAGAGATTCAAATGTTGTCAAAGCTCAGGCACAGGCATTTGGTCTCTCTAATTGGCTATTGTGATGAAAACCAAGAGATGATCTTGGTTTATGAGTTCATGTCAAATGGACCATTCAGAGATCATCTGTATGGTAAGAACTTGCCACCACTGTCATGGAAACAAAGACTAGAGATCTGCATTGGCGCTGCTCGCGGGCTTCACTACCTTCATACTGGCACAGCACAAGGCATCATTCACCGCGATGTGAAGACAACAAACATCCTTCTCGATGACCAGTTCACTGCCAAGGTTGCTGATTTCGGGTTGTCTAAAGATGCGCCAATGGGACAGAACCATGTGAGTACCGCAGTGAAGGGAAGCTTTGGGTACTTGGACCCTGAGTACTTTAGGAGGCAGCAACTGACAGACAAATCCGATGTCTACTCCTTCGGAGTTGTCATGCTCGAGGCATTGTGCGCTAGGCCTGCTATAAATCCAGCACTTCCAAGAGAGCAAGTCAACTTGGCCGACTGGGGAATGCAGTGGAAGAGGAAAGGCTTGCTGGAAAAGATTGTCGACCCTCTCCTCATTGGAACCATCAACCCTGAATCCATGAAGAAGTTTGGTGAGGCTGCCGAGAAGTGCTTGTTAGAGCACGGTGTGGATAGGCCTACGATGGGAGATGTGCTGTGGAACTTGGAGTATGCTCTGCAGCTTCAAGAGGCATTCACCGAAGGAAAGGGCGAAGATGACAGCATTAACGCTACCCCCTCCGCTGATGCTGCATCTGCCTCTCCTACTGATGCTGCTGCTGCCGCTCCTACTGCCGCTGCTTCCGTTCCTCTCCCGGCTGCTATCCTGGAGGAAGAAGCCCCCTACAGAACAGACTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase_Tyr

Protein Analysis

842

Amino Acids

92.88

Weight (kDa)

5.88

Isoelectric Point (pI)

39.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 66 - 211 4e-10 Malectin domain
Malectin_like PF12819 67 - 396 1e-23 Malectin-like domain
Malectin PF11721 305 - 374 2.1e-08 Malectin domain
Pkinase PF00069 510 - 710 1.2e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 512 - 704 1.1e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010976)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G21480 AT4G39110
fragaria_vesca FvH4_2g09700
malus_domestica MD05G1060800.v1.1 MD10G1068600.v1.1
prunus_persica Prupe.8G090600_v2.0.a1
pyrus_communis pycom10g05470
rosa_chinensis RchiOBHm_Chr6g0266011
rosa_laevigata RLG00000014135 RLG00000014136 RLG00000014138
rosa_multiflora Rmu_sc0000776.1_g000006
rosa_roxburghii Rroxscaffold_174G00435080 Rroxscaffold_7G00202100
rosa_rugosa Rorug06G0022500
rosa_samantha Rh6AG143700 Rh6BG144000 Rh6CG140700 Rh6DG128300
rosa_wichuraiana Rw6G012420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1079
Acc16I TGCGCA 1 cut(s) 852
AccBSI CCGCTC 2 cut(s) 1274, 2453
AccI GTMKAC 4 cut(s) 120, 993, 2076, 2211
AccII CGCG 2 cut(s) 1848, 1896
AclWI GGATC 1 cut(s) 928
AcoI YGGCCR 2 cut(s) 1480, 2160
AcsI RAATTY 1 cut(s) 436
AcuI CTGAAG 2 cut(s) 437, 674
AdeI CACNNNGTG 1 cut(s) 2296
AfaI GTAC 8 cut(s) 488, 560, 1337, 1404, 1460, 1999, 2024, 2039
AfeI AGCGCT 1 cut(s) 220
AfiI CCNNNNNNNGG 3 cut(s) 240, 709, 2312
AjiI CACGTC 1 cut(s) 1105
AjnI CCWGG 4 cut(s) 108, 394, 708, 2493
AjuI GAANNNNNNNTTGG 2 cut(s) 1644, 1676
AloI GAACNNNNNNTCC 2 cut(s) 1202, 1234
Alw21I GWGCWC 1 cut(s) 2292
Alw26I GTCTC 3 cut(s) 1345, 1407, 1702
AlwI GGATC 1 cut(s) 928
AlwNI CAGNNNCTG 2 cut(s) 656, 2056
Ama87I CYCGRG 1 cut(s) 2099
Aor51HI AGCGCT 1 cut(s) 220
AoxI GGCC 7 cut(s) 519, 759, 1474, 1480, 2117, 2160, 2303
ApoI RAATTY 1 cut(s) 436
ArsI GACNNNNNNTTYG 2 cut(s) 2058, 2090
Asp700I GAANNNNTTC 1 cut(s) 1379
AspLEI GCGC 6 cut(s) 221, 853, 1148, 1841, 1975, 2114
AspS9I GGNCC 6 cut(s) 243, 760, 1124, 1474, 1763, 2029
AsuC2I CCSGG 1 cut(s) 2483
AsuHPI GGTGA 4 cut(s) 169, 1883, 2273, 2356
AvaI CYCGRG 1 cut(s) 2099
AvaII GGWCC 4 cut(s) 243, 1124, 1763, 2029
BanII GRGCYC 1 cut(s) 810
BbsI GAAGAC 2 cut(s) 142, 1910
Bbv12I GWGCWC 1 cut(s) 2292
BceAI ACGGC 2 cut(s) 360, 693
BcgI CGANNNNNNTGC 2 cut(s) 392, 426
BciT130I CCWGG 4 cut(s) 110, 396, 710, 2495
BciVI GTATCC 1 cut(s) 807
BcnI CCSGG 1 cut(s) 2483
BcoDI GTCTC 3 cut(s) 1345, 1407, 1702
BfaI CTAG 3 cut(s) 146, 1823, 2115
BfmI CTRYAG 3 cut(s) 1281, 2345, 2512
BfoI RGCGCY 3 cut(s) 222, 1149, 1842
BfuI GTATCC 1 cut(s) 807
BglII AGATCT 1 cut(s) 1827
BmcAI AGTACT 1 cut(s) 2039
Bme1390I CCNGG 5 cut(s) 110, 396, 710, 2483, 2495
Bme18I GGWCC 4 cut(s) 243, 1124, 1763, 2029
BmeT110I CYCGRG 1 cut(s) 2099
BmgBI CACGTC 1 cut(s) 1105
BmgT120I GGNCC 6 cut(s) 243, 760, 1124, 1474, 1763, 2029
BmiI GGNNCC 3 cut(s) 1309, 2031, 2230
BmrFI CCNGG 5 cut(s) 110, 396, 710, 2483, 2495
BmrI ACTGGG 1 cut(s) 2176
BmsI GCATC 7 cut(s) 853, 1144, 1893, 1960, 2404, 2428, 2429
BmuI ACTGGG 1 cut(s) 2176
BpiI GAAGAC 2 cut(s) 142, 1910
BplI GAGNNNNNCTC 2 cut(s) 1132, 1164
BpmI CTGGAG 3 cut(s) 692, 1431, 2516
Bpu10I CCTNAGC 2 cut(s) 1149, 1679
BpuEI CTTGAG 2 cut(s) 786, 1341
BpuMI CCSGG 1 cut(s) 2483
BsaBI GATNNNNATC 1 cut(s) 101
BsaI GGTCTC 2 cut(s) 1345, 1702
BsaJI CCNNGG 5 cut(s) 395, 709, 771, 1477, 1941
BsaWI WCCGGW 1 cut(s) 936
Bsc4I CCNNNNNNNGG 3 cut(s) 240, 709, 2312
Bse1I ACTGG 4 cut(s) 695, 1873, 1930, 2171
Bse3DI GCAATG 2 cut(s) 1335, 1570
Bse8I GATNNNNATC 1 cut(s) 101
BseBI CCWGG 4 cut(s) 110, 396, 710, 2495
BseDI CCNNGG 5 cut(s) 395, 709, 771, 1477, 1941
BseGI GGATG 3 cut(s) 1159, 1216, 1914
BseJI GATNNNNATC 1 cut(s) 101
BseLI CCNNNNNNNGG 3 cut(s) 240, 709, 2312
BseMI GCAATG 2 cut(s) 1335, 1570
BseMII CTCAG 4 cut(s) 1163, 1455, 1693, 2025
BseNI ACTGG 4 cut(s) 695, 1873, 1930, 2171
BseRI GAGGAG 2 cut(s) 321, 2210
Bsh1236I CGCG 2 cut(s) 1848, 1896
BshFI GGCC 7 cut(s) 521, 761, 1476, 1482, 2119, 2162, 2305
BsiHKAI GWGCWC 1 cut(s) 2292
BsiHKCI CYCGRG 1 cut(s) 2099
BsiSI CCGG 3 cut(s) 728, 937, 2483
BslFI GGGAC 3 cut(s) 726, 914, 1995
BslI CCNNNNNNNGG 3 cut(s) 240, 709, 2312
BsmAI GTCTC 3 cut(s) 1345, 1407, 1702
BsmFI GGGAC 3 cut(s) 726, 914, 1995
BsmI GAATGC 2 cut(s) 2178, 2360
BsnI GGCC 7 cut(s) 521, 761, 1476, 1482, 2119, 2162, 2305
Bso31I GGTCTC 2 cut(s) 1345, 1702
BsoBI CYCGRG 1 cut(s) 2099
Bsp1286I GDGCHC 2 cut(s) 810, 2292
Bsp1407I TGTACA 2 cut(s) 1335, 1402
Bsp143I GATC 6 cut(s) 448, 591, 933, 1734, 1774, 1827
BspANI GGCC 7 cut(s) 521, 761, 1476, 1482, 2119, 2162, 2305
BspCNI CTCAG 4 cut(s) 1162, 1454, 1692, 2026
BspFNI CGCG 2 cut(s) 1848, 1896
BspHI TCATGA 1 cut(s) 474
BspLI GGNNCC 3 cut(s) 1309, 2031, 2230
BspMAI CTGCAG 2 cut(s) 1285, 2349
BspPI GGATC 1 cut(s) 928
BspTNI GGTCTC 2 cut(s) 1345, 1702
BsrBI CCGCTC 2 cut(s) 1274, 2453
BsrDI GCAATG 2 cut(s) 1335, 1570
BsrGI TGTACA 2 cut(s) 1335, 1402
BsrI ACTGG 4 cut(s) 695, 1873, 1930, 2171
BssECI CCNNGG 5 cut(s) 395, 709, 771, 1477, 1941
BssMI GATC 6 cut(s) 448, 591, 933, 1734, 1774, 1827
BssT1I CCWWGG 3 cut(s) 771, 1477, 1941
Bst2UI CCWGG 4 cut(s) 110, 396, 710, 2495
Bst4CI ACNGT 5 cut(s) 717, 1042, 1049, 1806, 2294
Bst6I CTCTTC 5 cut(s) 1093, 1343, 1390, 1468, 2177
BstAPI GCANNNNNTGC 1 cut(s) 848
BstAUI TGTACA 2 cut(s) 1335, 1402
BstC8I GCNNGC 6 cut(s) 217, 704, 1846, 1850, 2121, 2195
BstDEI CTNAG 4 cut(s) 1149, 1441, 1679, 2034
BstF5I GGATG 3 cut(s) 1159, 1216, 1914
BstFNI CGCG 2 cut(s) 1848, 1896
BstH2I RGCGCY 3 cut(s) 222, 1149, 1842
BstHHI GCGC 6 cut(s) 221, 853, 1148, 1841, 1975, 2114
BstKTI GATC 6 cut(s) 451, 594, 936, 1737, 1777, 1830
BstMAI GTCTC 3 cut(s) 1345, 1407, 1702
BstMBI GATC 6 cut(s) 448, 591, 933, 1734, 1774, 1827
BstNI CCWGG 4 cut(s) 110, 396, 710, 2495
BstNSI RCATGY 2 cut(s) 1409, 1459
BstSCI CCNGG 5 cut(s) 108, 394, 708, 2481, 2493
BstSFI CTRYAG 3 cut(s) 1281, 2345, 2512
BstUI CGCG 2 cut(s) 1848, 1896
BstV2I GAAGAC 2 cut(s) 142, 1910
BstX2I RGATCY 1 cut(s) 1827
BstXI CCANNNNNNTGG 2 cut(s) 757, 1809
BstYI RGATCY 1 cut(s) 1827
BsuI GTATCC 1 cut(s) 807
BsuRI GGCC 7 cut(s) 521, 761, 1476, 1482, 2119, 2162, 2305
BtgZI GCGATG 2 cut(s) 252, 1911
BtrI CACGTC 1 cut(s) 1105
BtsCI GGATG 3 cut(s) 1159, 1216, 1914
BtsI GCAGTG 3 cut(s) 1935, 2010, 2183
BtsIMutI CAGTG 6 cut(s) 702, 1449, 1802, 1935, 2010, 2183
Cac8I GCNNGC 6 cut(s) 217, 704, 1846, 1850, 2121, 2195
CaiI CAGNNNCTG 2 cut(s) 656, 2056
CciI TCATGA 1 cut(s) 474
CfoI GCGC 6 cut(s) 221, 853, 1148, 1841, 1975, 2114
Cfr13I GGNCC 6 cut(s) 243, 760, 1124, 1474, 1763, 2029
Csp6I GTAC 8 cut(s) 487, 559, 1336, 1403, 1459, 1998, 2023, 2038
CspCI CAANNNNNGTGG 2 cut(s) 624, 659
CviQI GTAC 8 cut(s) 487, 559, 1336, 1403, 1459, 1998, 2023, 2038
DdeI CTNAG 4 cut(s) 1149, 1441, 1679, 2034
DpnI GATC 6 cut(s) 450, 593, 935, 1736, 1776, 1829
DpnII GATC 6 cut(s) 448, 591, 933, 1734, 1774, 1827
DraIII CACNNNGTG 1 cut(s) 2296
DrdI GACNNNNNNGTC 1 cut(s) 1079
DseDI GACNNNNNNGTC 1 cut(s) 1079
EaeI YGGCCR 2 cut(s) 1480, 2160
Eam1104I CTCTTC 5 cut(s) 1093, 1343, 1390, 1468, 2177
EarI CTCTTC 5 cut(s) 1093, 1343, 1390, 1468, 2177
Eco130I CCWWGG 3 cut(s) 771, 1477, 1941
Eco147I AGGCCT 2 cut(s) 2119, 2305
Eco24I GRGCYC 1 cut(s) 810
Eco31I GGTCTC 2 cut(s) 1345, 1702
Eco47I GGWCC 4 cut(s) 243, 1124, 1763, 2029
Eco47III AGCGCT 1 cut(s) 220
Eco57I CTGAAG 2 cut(s) 437, 674
Eco88I CYCGRG 1 cut(s) 2099
EcoO109I RGGNCCY 1 cut(s) 243
EcoRII CCWGG 4 cut(s) 108, 394, 708, 2493
EcoT14I CCWWGG 3 cut(s) 771, 1477, 1941
EcoT22I ATGCAT 1 cut(s) 922
EcoT38I GRGCYC 1 cut(s) 810
ErhI CCWWGG 3 cut(s) 771, 1477, 1941
FalI AAGNNNNNCTT 4 cut(s) 1092, 1124, 2000, 2032
FaqI GGGAC 3 cut(s) 726, 914, 1995
FauI CCCGC 1 cut(s) 1841
FauNDI CATATG 1 cut(s) 922
FblI GTMKAC 4 cut(s) 120, 993, 2076, 2211
FokI GGATG 3 cut(s) 1166, 1223, 1901
FriOI GRGCYC 1 cut(s) 810
FspBI CTAG 3 cut(s) 146, 1823, 2115
FspI TGCGCA 1 cut(s) 852
GlaI GCGC 6 cut(s) 220, 852, 1147, 1840, 1974, 2113
GsuI CTGGAG 3 cut(s) 692, 1431, 2516
HaeII RGCGCY 3 cut(s) 222, 1149, 1842
HaeIII GGCC 7 cut(s) 521, 761, 1476, 1482, 2119, 2162, 2305
HapII CCGG 3 cut(s) 728, 937, 2483
HhaI GCGC 6 cut(s) 221, 853, 1148, 1841, 1975, 2114
Hin6I GCGC 6 cut(s) 219, 851, 1146, 1839, 1973, 2112
HinP1I GCGC 6 cut(s) 219, 851, 1146, 1839, 1973, 2112
HincII GTYRAC 3 cut(s) 1084, 2155, 2212
HindII GTYRAC 3 cut(s) 1084, 2155, 2212
HindIII AAGCTT 1 cut(s) 2014
HinfI GANTC 7 cut(s) 257, 1224, 1238, 1485, 1529, 1660, 2243
HpaII CCGG 3 cut(s) 728, 937, 2483
HphI GGTGA 4 cut(s) 169, 1883, 2273, 2356
Hpy99I CGWCG 1 cut(s) 88
HpyCH4III ACNGT 5 cut(s) 717, 1042, 1049, 1806, 2294
HpyCH4IV ACGT 4 cut(s) 83, 377, 570, 1104
HpyF3I CTNAG 4 cut(s) 1149, 1441, 1679, 2034
HpySE526I ACGT 4 cut(s) 83, 377, 570, 1104
HspAI GCGC 6 cut(s) 219, 851, 1146, 1839, 1973, 2112
Kzo9I GATC 6 cut(s) 448, 591, 933, 1734, 1774, 1827
LmnI GCTCC 8 cut(s) 226, 501, 658, 711, 829, 1271, 1307, 2458
LweI GCATC 7 cut(s) 853, 1144, 1893, 1960, 2404, 2428, 2429
MaeI CTAG 3 cut(s) 146, 1823, 2115
MaeII ACGT 4 cut(s) 83, 377, 570, 1104
MaeIII GTNAC 6 cut(s) 571, 892, 926, 1032, 1392, 1503
MalI GATC 6 cut(s) 450, 593, 935, 1736, 1776, 1829
MbiI CCGCTC 2 cut(s) 1274, 2453
MboI GATC 6 cut(s) 448, 591, 933, 1734, 1774, 1827
MfeI CAATTG 1 cut(s) 636
MflI RGATCY 1 cut(s) 1827
MhlI GDGCHC 2 cut(s) 810, 2292
MluCI AATT 9 cut(s) 436, 508, 584, 636, 1056, 1133, 1192, 1522, 1704
MlyI GAGTC 2 cut(s) 1233, 1523
MmeI TCCRAC 1 cut(s) 1267
Mph1103I ATGCAT 1 cut(s) 922
MroXI GAANNNNTTC 1 cut(s) 1379
MseI TTAA 4 cut(s) 80, 1200, 2394, 2527
MslI CAYNNNNRTG 3 cut(s) 1782, 1807, 1896
MspA1I CMGCKG 4 cut(s) 869, 1254, 2411, 2465
MspI CCGG 3 cut(s) 728, 937, 2483
MspR9I CCNGG 5 cut(s) 110, 396, 710, 2483, 2495
MunI CAATTG 1 cut(s) 636
Mva1269I GAATGC 2 cut(s) 2178, 2360
MvaI CCWGG 4 cut(s) 110, 396, 710, 2495
MvnI CGCG 2 cut(s) 1848, 1896
NciI CCSGG 1 cut(s) 2483
NdeI CATATG 1 cut(s) 922
NdeII GATC 6 cut(s) 448, 591, 933, 1734, 1774, 1827
NlaIV GGNNCC 3 cut(s) 1309, 2031, 2230
NmeAIII GCCGAG 1 cut(s) 2296
NmuCI GTSAC 3 cut(s) 571, 892, 1032
NsbI TGCGCA 1 cut(s) 852
NsiI ATGCAT 1 cut(s) 922
NspI RCATGY 2 cut(s) 1409, 1459
PaeR7I CTCGAG 1 cut(s) 2099
PagI TCATGA 1 cut(s) 474
PceI AGGCCT 2 cut(s) 2119, 2305
PctI GAATGC 2 cut(s) 2178, 2360
PdmI GAANNNNTTC 1 cut(s) 1379
PfeI GAWTC 5 cut(s) 257, 1238, 1485, 1660, 2243
PfoI TCCNGGA 1 cut(s) 2493
PleI GAGTC 2 cut(s) 1232, 1523
PpsI GAGTC 2 cut(s) 1232, 1523
PpuMI RGGWCCY 1 cut(s) 243
Psp5II RGGWCCY 1 cut(s) 243
Psp6I CCWGG 4 cut(s) 108, 394, 708, 2493
PspGI CCWGG 4 cut(s) 108, 394, 708, 2493
PspN4I GGNNCC 3 cut(s) 1309, 2031, 2230
PspPI GGNCC 6 cut(s) 243, 760, 1124, 1474, 1763, 2029
PspPPI RGGWCCY 1 cut(s) 243
PspXI VCTCGAGB 1 cut(s) 2099
PstI CTGCAG 2 cut(s) 1285, 2349
PstNI CAGNNNCTG 2 cut(s) 656, 2056
PsuI RGATCY 1 cut(s) 1827
PvuII CAGCTG 1 cut(s) 869
RsaI GTAC 8 cut(s) 488, 560, 1337, 1404, 1460, 1999, 2024, 2039
RsaNI GTAC 8 cut(s) 487, 559, 1336, 1403, 1459, 1998, 2023, 2038
RseI CAYNNNNRTG 3 cut(s) 1782, 1807, 1896
SalI GTCGAC 1 cut(s) 2210
SaqAI TTAA 4 cut(s) 80, 1200, 2394, 2527
Sau3AI GATC 6 cut(s) 448, 591, 933, 1734, 1774, 1827
Sau96I GGNCC 6 cut(s) 243, 760, 1124, 1474, 1763, 2029
ScaI AGTACT 1 cut(s) 2039
SchI GAGTC 2 cut(s) 1233, 1523
ScrFI CCNGG 5 cut(s) 110, 396, 710, 2483, 2495
SduI GDGCHC 2 cut(s) 810, 2292
SfaNI GCATC 7 cut(s) 853, 1144, 1893, 1960, 2404, 2428, 2429
SfcI CTRYAG 3 cut(s) 1281, 2345, 2512
Sfr274I CTCGAG 1 cut(s) 2099
SinI GGWCC 4 cut(s) 243, 1124, 1763, 2029
SlaI CTCGAG 1 cut(s) 2099
SmiMI CAYNNNNRTG 3 cut(s) 1782, 1807, 1896
SmlI CTYRAG 3 cut(s) 801, 1356, 2099
SmoI CTYRAG 3 cut(s) 801, 1356, 2099
Sse9I AATT 9 cut(s) 436, 508, 584, 636, 1056, 1133, 1192, 1522, 1704
SseBI AGGCCT 2 cut(s) 2119, 2305
SspMI CTAG 3 cut(s) 146, 1823, 2115
StuI AGGCCT 2 cut(s) 2119, 2305
StyD4I CCNGG 5 cut(s) 108, 394, 708, 2481, 2493
StyI CCWWGG 3 cut(s) 771, 1477, 1941
TaaI ACNGT 5 cut(s) 717, 1042, 1049, 1806, 2294
TaiI ACGT 4 cut(s) 86, 380, 573, 1107
TaqI TCGA 8 cut(s) 86, 590, 1227, 1527, 1532, 1923, 2100, 2211
TaqII GACCGA 1 cut(s) 590
TasI AATT 9 cut(s) 436, 508, 584, 636, 1056, 1133, 1192, 1522, 1704
TatI WGTACW 5 cut(s) 486, 1335, 1402, 1458, 2037
TauI GCSGC 4 cut(s) 524, 623, 2453, 2465
TfiI GAWTC 5 cut(s) 257, 1238, 1485, 1660, 2243
Tru1I TTAA 4 cut(s) 80, 1200, 2394, 2527
Tru9I TTAA 4 cut(s) 80, 1200, 2394, 2527
TscAI CASTG 6 cut(s) 702, 1449, 1809, 1942, 2010, 2183
TseFI GTSAC 3 cut(s) 571, 892, 1032
Tsp45I GTSAC 3 cut(s) 571, 892, 1032
TspDTI ATGAA 7 cut(s) 616, 1080, 1196, 1734, 1741, 1853, 2264
TspGWI ACGGA 2 cut(s) 1116, 2461
TspRI CASTG 6 cut(s) 702, 1449, 1809, 1942, 2010, 2183
VpaK11BI GGWCC 4 cut(s) 243, 1124, 1763, 2029
XapI RAATTY 1 cut(s) 436
XceI RCATGY 2 cut(s) 1409, 1459
XcmI CCANNNNNNNNNTGG 1 cut(s) 1806
XhoI CTCGAG 1 cut(s) 2099
XmiI GTMKAC 4 cut(s) 120, 993, 2076, 2211
XmnI GAANNNNTTC 1 cut(s) 1379
XspI CTAG 3 cut(s) 146, 1823, 2115
ZrmI AGTACT 1 cut(s) 2039
Zsp2I ATGCAT 1 cut(s) 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.