Rroxscaffold_7G00202100

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0010976
Physical Location & Seq
Reverse (-)
49965261 .. 49967954
2694 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00202100.1

Sequence Viewer

Length: 2694 bp
ATGGAGATAGAAAAGACACCAAAAGAACCCAAAAAGAAGTATCTTTTTCTATCCTCCTTGCCATCATTATCATCATCATTAACGTCGAGATACATGATGGCTATCCTCCTGGTCTTTGTCTACGCACTTCTCTACAACCCCACCCTAGTCTTCTCTGACCCTTCCCCCACCACCTTCACCCCCCAAGACAACTTCCTCATCAACTGCGGTGCTGCAAGCGCTCCCACACTACCCGATGGAAGGACCTTCAAGACTGATTCACAATCATCGCAACATTTGAAAGCAAATGATGATAACAAGGTGTCTGATGACAAGGCAGATGTGCCTTCTCCTCTTTACAAAACGGCAAGGATTTTCACAAGTGAAGCCACTTATACGTTCCACATGGGAAGTCCTGGGTGGCATTGGGTTCGCCTCTATTTCTATCCCATTCAAAATTCTGTGTCTGATCTTCAGAAGGCAGCTTTCAATGTCATGACAGATAAGTACACTTTGCTCCATAGCTTCAATTTCAATGAGGCCGCTAACAACAACACCATCAAAGTTGTTCGCAAGGAGTACCTTCTCAACGTGACCGAGCAGCAATTCTCGATCAAGTTCTCTCCCCAGAAGAACTCTGCGGCGTTCATCAATGCAATTGAGGTGGTTTCAGCTCCTGATTATCTCATCTCGGACACGGCTAACAACCTTCAGCCAGTGAGCCAGCTCCAGGGGTTGTCCAAATTTGGATACGAATATATGTACAGGATTAACGTGGGAGGACCTCTAGTGACCCCGGTCAATGACACATTAGGACGGTTCTGGTTGCCGGACGAGCCATACATCAAGTCCAAGAACATGGCCCAAAGTGCCAAGGTTGAAACCAAAACTATCAAGTATCCTCAAGGGCTCACACCCCAAATAGCTCCACCAATAGTTTATGCAACTGCTGCGCACATGGAAGATGCAGCTGTCAGCAATCAAAAGTTCAATGTGACATGGGACTTTCAGGCTGAAAATGCATATGGTTACTTGATCCGGTTGCATTTCTGCGACATTGTGAGCAAAACACTTGGTAATCTTTACTTCAATGTCTACATCAATGGGCAGATGGCAATAAGTGATTTGGATTTGTCACAAACCGTGAACGGTTTGGCAATTCCATTCTACAAGGACATTGTGGTCAACTCTTCATTGATAAAAGACGTGCTTTCAATCCAGATTGGTCCGTCTAAATTGGGGAGTGGCGCTCAGGATGCCATTCTAAATGGTTTGGAGGTTATGAAAATAAGCAATTCTGTTAATAGTTTGGATGGAGAGTTCGGAGTCGATGGAAAAGAATCAAAAGATAGCAGCGGAGGTGTTCACAAGGGAGCGGTGGCTGCAGTCGGATTTGGTTTGATGTTTGGAGCCTTTATTGGACTTGGGGCAATGGTGTACAAATGGAAGAAGAGACCTCAAGATTGGCAGAAAAGGAACAGCTTCTCTTCTTGGTTACTTCCTGTACATGCTGGCGACAGCAGTTTTATGTCAAGCAAGAACTCAGTGGGAAAGAGCATGTACTCTTCCTCTATGGGCCTTGGCCGATTCTTCTCTCTCTCGGAGTTACAGGAAGCTACCAACAATTTCGACTCGAACAAAATCATTGGTGTTGGTGGATTTGGCAATGTGTATCTTGGCGTGATTGATGATGGGATTAGTGTTGCTGTCAAGAGAGGAAATCCACAATCTGAACAGGGGATTACAGAGTTCCAAACAGAGATTCAAATGTTGTCAAAGCTCAGGCACAGGCATTTGGTCTCTCTAATTGGCTATTGTGATGAAAACCAAGAGATGATCTTGGTTTATGAGTTCATGTCAAATGGACCATTCAGAGATCATCTGTATGGTAAGAACTTGCCACCACTGTCATGGAAACAAAGACTAGAGATCTGCATTGGCGCTGCTCGCGGGCTTCACTACCTTCATACGGGCACAGCACAAGGCATCATTCACCGCGATGTGAAGACAACAAACATCCTTCTCGATGACCAGTTCACTGCCAAGGTTGCTGATTTCGGGTTGTCTAAAGATGCGCCAATGGGACAGAACCATGTGAGTACCGCAGTGAAGGGAAGCTTTGGGTACTTGGACCCTGAGTACTTTAGGAGGCAGCAACTGACAGACAAATCCGATGTCTACTCCTTCGGAGTTGTCATGCTCGAGGCATTGTGCGCTAGGCCTGCTATAAATCCAGCACTTCCAAGAGAGCAAGTCAACTTGGCCGACTGGGGAATGCAGTGGAAGAGGAAAGGCTTGCTGGAAAAGATTGTCGACCCTCTCCTCATTGGAACCATCAACCCTGAATCCATGAAGAAGTTTGGTGAGGCTGCCGAGAAGTGCTTGTTAGAGCACGGTGTGGATAGGCCTACGATGGGAGATGTGCTGTGGAACTTGGAGTATGCTCTGCAGCTTCAAGAGGCATTCACCGAAGGAAAGGGCGAAGATGACAGCATTACTGCTACCCCCTCCGCTGATGTTGCATCTGCCTCTCCTACTGATGCTGCTGCTGCCGCTCCTACTGCCGCTGCTTCCGTTCCTCTCCCGGCTGCTATCCTGGAGGAAGAAGCCCCCCTACAGAACAGACTATTAATGATCAATCTGGAACTGCTATATTGTCTCAATTTTCTAACCTCAATGGTAGGTAAAAAGTTTAAAATTCTAGTCCAGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase_Tyr

Protein Analysis

897

Amino Acids

99.09

Weight (kDa)

6.11

Isoelectric Point (pI)

38.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 66 - 211 5.1e-10 Malectin domain
Malectin_like PF12819 67 - 423 1.1e-28 Malectin-like domain
Malectin PF11721 247 - 401 1.6e-09 Malectin domain
Pkinase PF00069 537 - 737 1.4e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 539 - 731 1.3e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010976)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G21480 AT4G39110
fragaria_vesca FvH4_2g09700
malus_domestica MD05G1060800.v1.1 MD10G1068600.v1.1
prunus_persica Prupe.8G090600_v2.0.a1
pyrus_communis pycom10g05470
rosa_chinensis RchiOBHm_Chr6g0266011
rosa_laevigata RLG00000014135 RLG00000014136 RLG00000014138
rosa_multiflora Rmu_sc0000776.1_g000006
rosa_roxburghii Rroxscaffold_174G00435080 Rroxscaffold_7G00202100
rosa_rugosa Rorug06G0022500
rosa_samantha Rh6AG143700 Rh6BG144000 Rh6CG140700 Rh6DG128300
rosa_wichuraiana Rw6G012420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1160
Acc16I TGCGCA 1 cut(s) 933
AccBSI CCGCTC 2 cut(s) 1355, 2534
AccI GTMKAC 4 cut(s) 120, 1074, 2157, 2292
AccII CGCG 2 cut(s) 1929, 1977
AclWI GGATC 1 cut(s) 1009
AcoI YGGCCR 2 cut(s) 1561, 2241
AcsI RAATTY 3 cut(s) 436, 722, 2676
AcuI CTGAAG 2 cut(s) 437, 674
AdeI CACNNNGTG 1 cut(s) 2377
AfeI AGCGCT 1 cut(s) 220
AfiI CCNNNNNNNGG 4 cut(s) 240, 709, 1948, 2393
AjiI CACGTC 1 cut(s) 1186
AjnI CCWGG 4 cut(s) 108, 394, 708, 2574
AjuI GAANNNNNNNTTGG 2 cut(s) 1725, 1757
AloI GAACNNNNNNTCC 2 cut(s) 1283, 1315
Alw21I GWGCWC 1 cut(s) 2373
Alw26I GTCTC 3 cut(s) 1426, 1783, 2642
AlwI GGATC 1 cut(s) 1009
AlwNI CAGNNNCTG 2 cut(s) 656, 2137
Ama87I CYCGRG 1 cut(s) 2180
Aor51HI AGCGCT 1 cut(s) 220
AoxI GGCC 7 cut(s) 519, 840, 1555, 1561, 2198, 2241, 2384
ApoI RAATTY 3 cut(s) 436, 722, 2676
ArsI GACNNNNNNTTYG 2 cut(s) 2139, 2171
AseI ATTAAT 1 cut(s) 2609
Asp700I GAANNNNTTC 1 cut(s) 1460
AspLEI GCGC 6 cut(s) 221, 934, 1229, 1922, 2056, 2195
AspS9I GGNCC 7 cut(s) 243, 761, 841, 1205, 1555, 1844, 2110
AsuC2I CCSGG 2 cut(s) 776, 2564
AsuHPI GGTGA 4 cut(s) 169, 1964, 2354, 2437
AvaI CYCGRG 1 cut(s) 2180
AvaII GGWCC 5 cut(s) 243, 761, 1205, 1844, 2110
BaeGI GKGCMC 1 cut(s) 1955
BanII GRGCYC 1 cut(s) 891
BarI GAAGNNNNNNTAC 2 cut(s) 2577, 2609
BbsI GAAGAC 2 cut(s) 142, 1991
Bbv12I GWGCWC 1 cut(s) 2373
BceAI ACGGC 2 cut(s) 360, 693
BcgI CGANNNNNNTGC 2 cut(s) 392, 426
BciT130I CCWGG 4 cut(s) 110, 396, 710, 2576
BciVI GTATCC 2 cut(s) 722, 888
BclI TGATCA 1 cut(s) 2613
BcnI CCSGG 2 cut(s) 776, 2564
BcoDI GTCTC 3 cut(s) 1426, 1783, 2642
BfaI CTAG 5 cut(s) 146, 767, 1904, 2196, 2681
BfmI CTRYAG 3 cut(s) 1362, 2426, 2594
BfoI RGCGCY 3 cut(s) 222, 1230, 1923
BfuI GTATCC 2 cut(s) 722, 888
BglII AGATCT 1 cut(s) 1908
BmcAI AGTACT 2 cut(s) 2120, 2690
Bme1390I CCNGG 6 cut(s) 110, 396, 710, 776, 2564, 2576
Bme18I GGWCC 5 cut(s) 243, 761, 1205, 1844, 2110
BmeT110I CYCGRG 1 cut(s) 2180
BmgBI CACGTC 1 cut(s) 1186
BmgT120I GGNCC 7 cut(s) 243, 761, 841, 1205, 1555, 1844, 2110
BmiI GGNNCC 3 cut(s) 1390, 2112, 2311
BmrFI CCNGG 6 cut(s) 110, 396, 710, 776, 2564, 2576
BmrI ACTGGG 1 cut(s) 2257
BmsI GCATC 6 cut(s) 934, 1225, 1974, 2041, 2509, 2510
BmuI ACTGGG 1 cut(s) 2257
BoxI GACNNNNGTC 1 cut(s) 776
BpiI GAAGAC 2 cut(s) 142, 1991
BplI GAGNNNNNCTC 2 cut(s) 1213, 1245
BpmI CTGGAG 2 cut(s) 692, 2597
Bpu10I CCTNAGC 2 cut(s) 1230, 1760
BpuEI CTTGAG 2 cut(s) 867, 1422
BpuMI CCSGG 2 cut(s) 776, 2564
BsaBI GATNNNNATC 1 cut(s) 101
BsaI GGTCTC 2 cut(s) 1426, 1783
BsaJI CCNNGG 6 cut(s) 395, 709, 774, 852, 1558, 2022
BsaWI WCCGGW 1 cut(s) 1017
Bsc4I CCNNNNNNNGG 4 cut(s) 240, 709, 1948, 2393
Bse1I ACTGG 4 cut(s) 695, 2011, 2252, 2686
Bse3DI GCAATG 2 cut(s) 1416, 1651
Bse8I GATNNNNATC 1 cut(s) 101
BseBI CCWGG 4 cut(s) 110, 396, 710, 2576
BseDI CCNNGG 6 cut(s) 395, 709, 774, 852, 1558, 2022
BseGI GGATG 3 cut(s) 1240, 1297, 1995
BseJI GATNNNNATC 1 cut(s) 101
BseLI CCNNNNNNNGG 4 cut(s) 240, 709, 1948, 2393
BseMI GCAATG 2 cut(s) 1416, 1651
BseMII CTCAG 4 cut(s) 1244, 1536, 1774, 2106
BseNI ACTGG 4 cut(s) 695, 2011, 2252, 2686
BseRI GAGGAG 2 cut(s) 321, 2291
BseSI GKGCMC 1 cut(s) 1955
Bsh1236I CGCG 2 cut(s) 1929, 1977
BshFI GGCC 7 cut(s) 521, 842, 1557, 1563, 2200, 2243, 2386
BsiHKAI GWGCWC 1 cut(s) 2373
BsiHKCI CYCGRG 1 cut(s) 2180
BsiSI CCGG 4 cut(s) 776, 809, 1018, 2564
BslFI GGGAC 2 cut(s) 995, 2076
BslI CCNNNNNNNGG 4 cut(s) 240, 709, 1948, 2393
BsmAI GTCTC 3 cut(s) 1426, 1783, 2642
BsmFI GGGAC 2 cut(s) 995, 2076
BsmI GAATGC 2 cut(s) 2259, 2441
BsnI GGCC 7 cut(s) 521, 842, 1557, 1563, 2200, 2243, 2386
Bso31I GGTCTC 2 cut(s) 1426, 1783
BsoBI CYCGRG 1 cut(s) 2180
Bsp1286I GDGCHC 3 cut(s) 891, 1955, 2373
Bsp1407I TGTACA 3 cut(s) 741, 1416, 1483
Bsp143I GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2613
BspANI GGCC 7 cut(s) 521, 842, 1557, 1563, 2200, 2243, 2386
BspCNI CTCAG 4 cut(s) 1243, 1535, 1773, 2107
BspFNI CGCG 2 cut(s) 1929, 1977
BspHI TCATGA 1 cut(s) 474
BspLI GGNNCC 3 cut(s) 1390, 2112, 2311
BspMAI CTGCAG 2 cut(s) 1366, 2430
BspPI GGATC 1 cut(s) 1009
BspTNI GGTCTC 2 cut(s) 1426, 1783
BsrBI CCGCTC 2 cut(s) 1355, 2534
BsrDI GCAATG 2 cut(s) 1416, 1651
BsrGI TGTACA 3 cut(s) 741, 1416, 1483
BsrI ACTGG 4 cut(s) 695, 2011, 2252, 2686
BssECI CCNNGG 6 cut(s) 395, 709, 774, 852, 1558, 2022
BssMI GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2613
BssT1I CCWWGG 3 cut(s) 852, 1558, 2022
Bst2UI CCWGG 4 cut(s) 110, 396, 710, 2576
Bst4CI ACNGT 5 cut(s) 798, 1123, 1130, 1887, 2375
Bst6I CTCTTC 5 cut(s) 1174, 1424, 1471, 1549, 2258
BstAPI GCANNNNNTGC 1 cut(s) 929
BstAUI TGTACA 3 cut(s) 741, 1416, 1483
BstC8I GCNNGC 7 cut(s) 217, 704, 1492, 1927, 1931, 2202, 2276
BstDEI CTNAG 4 cut(s) 1230, 1522, 1760, 2115
BstF5I GGATG 3 cut(s) 1240, 1297, 1995
BstFNI CGCG 2 cut(s) 1929, 1977
BstH2I RGCGCY 3 cut(s) 222, 1230, 1923
BstHHI GCGC 6 cut(s) 221, 934, 1229, 1922, 2056, 2195
BstKTI GATC 7 cut(s) 451, 594, 1017, 1818, 1858, 1911, 2616
BstMAI GTCTC 3 cut(s) 1426, 1783, 2642
BstMBI GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2613
BstNI CCWGG 4 cut(s) 110, 396, 710, 2576
BstNSI RCATGY 2 cut(s) 1490, 1540
BstPAI GACNNNNGTC 1 cut(s) 776
BstSCI CCNGG 6 cut(s) 108, 394, 708, 774, 2562, 2574
BstSFI CTRYAG 3 cut(s) 1362, 2426, 2594
BstSLI GKGCMC 1 cut(s) 1955
BstUI CGCG 2 cut(s) 1929, 1977
BstV2I GAAGAC 2 cut(s) 142, 1991
BstX2I RGATCY 1 cut(s) 1908
BstXI CCANNNNNNTGG 2 cut(s) 838, 1890
BstYI RGATCY 1 cut(s) 1908
BsuI GTATCC 2 cut(s) 722, 888
BsuRI GGCC 7 cut(s) 521, 842, 1557, 1563, 2200, 2243, 2386
BtgZI GCGATG 2 cut(s) 252, 1992
BtrI CACGTC 1 cut(s) 1186
BtsCI GGATG 3 cut(s) 1240, 1297, 1995
BtsI GCAGTG 3 cut(s) 2016, 2091, 2264
BtsIMutI CAGTG 6 cut(s) 702, 1530, 1883, 2016, 2091, 2264
Cac8I GCNNGC 7 cut(s) 217, 704, 1492, 1927, 1931, 2202, 2276
CaiI CAGNNNCTG 2 cut(s) 656, 2137
CciI TCATGA 1 cut(s) 474
CfoI GCGC 6 cut(s) 221, 934, 1229, 1922, 2056, 2195
Cfr13I GGNCC 7 cut(s) 243, 761, 841, 1205, 1555, 1844, 2110
CspCI CAANNNNNGTGG 2 cut(s) 624, 659
DdeI CTNAG 4 cut(s) 1230, 1522, 1760, 2115
DpnI GATC 7 cut(s) 450, 593, 1016, 1817, 1857, 1910, 2615
DpnII GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2613
DraI TTTAAA 1 cut(s) 2674
DraIII CACNNNGTG 1 cut(s) 2377
DrdI GACNNNNNNGTC 1 cut(s) 1160
DseDI GACNNNNNNGTC 1 cut(s) 1160
EaeI YGGCCR 2 cut(s) 1561, 2241
Eam1104I CTCTTC 5 cut(s) 1174, 1424, 1471, 1549, 2258
EarI CTCTTC 5 cut(s) 1174, 1424, 1471, 1549, 2258
Eco130I CCWWGG 3 cut(s) 852, 1558, 2022
Eco147I AGGCCT 2 cut(s) 2200, 2386
Eco24I GRGCYC 1 cut(s) 891
Eco31I GGTCTC 2 cut(s) 1426, 1783
Eco47I GGWCC 5 cut(s) 243, 761, 1205, 1844, 2110
Eco47III AGCGCT 1 cut(s) 220
Eco57I CTGAAG 2 cut(s) 437, 674
Eco88I CYCGRG 1 cut(s) 2180
EcoO109I RGGNCCY 2 cut(s) 243, 761
EcoRII CCWGG 4 cut(s) 108, 394, 708, 2574
EcoT14I CCWWGG 3 cut(s) 852, 1558, 2022
EcoT22I ATGCAT 1 cut(s) 1003
EcoT38I GRGCYC 1 cut(s) 891
ErhI CCWWGG 3 cut(s) 852, 1558, 2022
FalI AAGNNNNNCTT 4 cut(s) 1173, 1205, 2081, 2113
FaqI GGGAC 2 cut(s) 995, 2076
FauI CCCGC 1 cut(s) 1922
FauNDI CATATG 1 cut(s) 1003
FbaI TGATCA 1 cut(s) 2613
FblI GTMKAC 4 cut(s) 120, 1074, 2157, 2292
FokI GGATG 3 cut(s) 1247, 1304, 1982
FriOI GRGCYC 1 cut(s) 891
FspBI CTAG 5 cut(s) 146, 767, 1904, 2196, 2681
FspI TGCGCA 1 cut(s) 933
GlaI GCGC 6 cut(s) 220, 933, 1228, 1921, 2055, 2194
GsuI CTGGAG 2 cut(s) 692, 2597
HaeII RGCGCY 3 cut(s) 222, 1230, 1923
HaeIII GGCC 7 cut(s) 521, 842, 1557, 1563, 2200, 2243, 2386
HapII CCGG 4 cut(s) 776, 809, 1018, 2564
HhaI GCGC 6 cut(s) 221, 934, 1229, 1922, 2056, 2195
Hin6I GCGC 6 cut(s) 219, 932, 1227, 1920, 2054, 2193
HinP1I GCGC 6 cut(s) 219, 932, 1227, 1920, 2054, 2193
HincII GTYRAC 3 cut(s) 1165, 2236, 2293
HindII GTYRAC 3 cut(s) 1165, 2236, 2293
HindIII AAGCTT 1 cut(s) 2095
HinfI GANTC 7 cut(s) 257, 1305, 1319, 1566, 1610, 1741, 2324
HpaII CCGG 4 cut(s) 776, 809, 1018, 2564
HphI GGTGA 4 cut(s) 169, 1964, 2354, 2437
Hpy99I CGWCG 1 cut(s) 88
HpyCH4III ACNGT 5 cut(s) 798, 1123, 1130, 1887, 2375
HpyCH4IV ACGT 5 cut(s) 83, 377, 570, 753, 1185
HpyF3I CTNAG 4 cut(s) 1230, 1522, 1760, 2115
HpySE526I ACGT 5 cut(s) 83, 377, 570, 753, 1185
HspAI GCGC 6 cut(s) 219, 932, 1227, 1920, 2054, 2193
Ksp22I TGATCA 1 cut(s) 2613
Kzo9I GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2613
LmnI GCTCC 8 cut(s) 226, 501, 658, 711, 910, 1352, 1388, 2539
LweI GCATC 6 cut(s) 934, 1225, 1974, 2041, 2509, 2510
MaeI CTAG 5 cut(s) 146, 767, 1904, 2196, 2681
MaeII ACGT 5 cut(s) 83, 377, 570, 753, 1185
MaeIII GTNAC 7 cut(s) 571, 769, 973, 1007, 1113, 1473, 1584
MalI GATC 7 cut(s) 450, 593, 1016, 1817, 1857, 1910, 2615
MbiI CCGCTC 2 cut(s) 1355, 2534
MboI GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2613
MfeI CAATTG 1 cut(s) 636
MflI RGATCY 1 cut(s) 1908
MhlI GDGCHC 3 cut(s) 891, 1955, 2373
MlyI GAGTC 2 cut(s) 1314, 1604
MmeI TCCRAC 1 cut(s) 1348
Mph1103I ATGCAT 1 cut(s) 1003
MroXI GAANNNNTTC 1 cut(s) 1460
MseI TTAA 5 cut(s) 80, 750, 1281, 2609, 2673
MslI CAYNNNNRTG 3 cut(s) 1863, 1888, 1977
MspA1I CMGCKG 4 cut(s) 950, 1335, 2492, 2546
MspI CCGG 4 cut(s) 776, 809, 1018, 2564
MspR9I CCNGG 6 cut(s) 110, 396, 710, 776, 2564, 2576
MunI CAATTG 1 cut(s) 636
Mva1269I GAATGC 2 cut(s) 2259, 2441
MvaI CCWGG 4 cut(s) 110, 396, 710, 2576
MvnI CGCG 2 cut(s) 1929, 1977
NciI CCSGG 2 cut(s) 776, 2564
NdeI CATATG 1 cut(s) 1003
NdeII GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2613
NlaIV GGNNCC 3 cut(s) 1390, 2112, 2311
NmeAIII GCCGAG 1 cut(s) 2377
NmuCI GTSAC 4 cut(s) 571, 769, 973, 1113
NsbI TGCGCA 1 cut(s) 933
NsiI ATGCAT 1 cut(s) 1003
NspI RCATGY 2 cut(s) 1490, 1540
PaeR7I CTCGAG 1 cut(s) 2180
PagI TCATGA 1 cut(s) 474
PceI AGGCCT 2 cut(s) 2200, 2386
PctI GAATGC 2 cut(s) 2259, 2441
PdmI GAANNNNTTC 1 cut(s) 1460
PfeI GAWTC 5 cut(s) 257, 1319, 1566, 1741, 2324
PfoI TCCNGGA 1 cut(s) 2574
PleI GAGTC 2 cut(s) 1313, 1604
PpsI GAGTC 2 cut(s) 1313, 1604
PpuMI RGGWCCY 2 cut(s) 243, 761
PshAI GACNNNNGTC 1 cut(s) 776
PshBI ATTAAT 1 cut(s) 2609
Psp5II RGGWCCY 2 cut(s) 243, 761
Psp6I CCWGG 4 cut(s) 108, 394, 708, 2574
PspGI CCWGG 4 cut(s) 108, 394, 708, 2574
PspN4I GGNNCC 3 cut(s) 1390, 2112, 2311
PspPI GGNCC 7 cut(s) 243, 761, 841, 1205, 1555, 1844, 2110
PspPPI RGGWCCY 2 cut(s) 243, 761
PspXI VCTCGAGB 1 cut(s) 2180
PstI CTGCAG 2 cut(s) 1366, 2430
PstNI CAGNNNCTG 2 cut(s) 656, 2137
PsuI RGATCY 1 cut(s) 1908
PvuII CAGCTG 1 cut(s) 950
RseI CAYNNNNRTG 3 cut(s) 1863, 1888, 1977
SalI GTCGAC 1 cut(s) 2291
SaqAI TTAA 5 cut(s) 80, 750, 1281, 2609, 2673
Sau3AI GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2613
Sau96I GGNCC 7 cut(s) 243, 761, 841, 1205, 1555, 1844, 2110
ScaI AGTACT 2 cut(s) 2120, 2690
SchI GAGTC 2 cut(s) 1314, 1604
ScrFI CCNGG 6 cut(s) 110, 396, 710, 776, 2564, 2576
SduI GDGCHC 3 cut(s) 891, 1955, 2373
SfaNI GCATC 6 cut(s) 934, 1225, 1974, 2041, 2509, 2510
SfcI CTRYAG 3 cut(s) 1362, 2426, 2594
Sfr274I CTCGAG 1 cut(s) 2180
SinI GGWCC 5 cut(s) 243, 761, 1205, 1844, 2110
SlaI CTCGAG 1 cut(s) 2180
SmiMI CAYNNNNRTG 3 cut(s) 1863, 1888, 1977
SmlI CTYRAG 3 cut(s) 882, 1437, 2180
SmoI CTYRAG 3 cut(s) 882, 1437, 2180
SseBI AGGCCT 2 cut(s) 2200, 2386
SspMI CTAG 5 cut(s) 146, 767, 1904, 2196, 2681
StuI AGGCCT 2 cut(s) 2200, 2386
StyD4I CCNGG 6 cut(s) 108, 394, 708, 774, 2562, 2574
StyI CCWWGG 3 cut(s) 852, 1558, 2022
TaaI ACNGT 5 cut(s) 798, 1123, 1130, 1887, 2375
TaiI ACGT 5 cut(s) 86, 380, 573, 756, 1188
TaqI TCGA 8 cut(s) 86, 590, 1308, 1608, 1613, 2004, 2181, 2292
TaqII GACCGA 1 cut(s) 590
TatI WGTACW 7 cut(s) 486, 741, 1416, 1483, 1539, 2118, 2688
TauI GCSGC 4 cut(s) 524, 623, 2534, 2546
TfiI GAWTC 5 cut(s) 257, 1319, 1566, 1741, 2324
Tru1I TTAA 5 cut(s) 80, 750, 1281, 2609, 2673
Tru9I TTAA 5 cut(s) 80, 750, 1281, 2609, 2673
TscAI CASTG 6 cut(s) 702, 1530, 1890, 2023, 2091, 2264
TseFI GTSAC 4 cut(s) 571, 769, 973, 1113
Tsp45I GTSAC 4 cut(s) 571, 769, 973, 1113
TspDTI ATGAA 7 cut(s) 616, 1161, 1277, 1815, 1822, 1934, 2345
TspGWI ACGGA 2 cut(s) 1197, 2542
TspRI CASTG 6 cut(s) 702, 1530, 1890, 2023, 2091, 2264
VpaK11BI GGWCC 5 cut(s) 243, 761, 1205, 1844, 2110
VspI ATTAAT 1 cut(s) 2609
XapI RAATTY 3 cut(s) 436, 722, 2676
XceI RCATGY 2 cut(s) 1490, 1540
XcmI CCANNNNNNNNNTGG 1 cut(s) 1887
XhoI CTCGAG 1 cut(s) 2180
XmiI GTMKAC 4 cut(s) 120, 1074, 2157, 2292
XmnI GAANNNNTTC 1 cut(s) 1460
XspI CTAG 5 cut(s) 146, 767, 1904, 2196, 2681
ZrmI AGTACT 2 cut(s) 2120, 2690
Zsp2I ATGCAT 1 cut(s) 1003
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.