Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0005585

Physical Location & Seq

Genomic Coordinates Reverse (-)

11796643 .. 11800232

Gene Structure 3590 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGAAGTTTATGAAACTTGGATCGAAGCCGGATTCTTTTCAGACTGATGGAAATAATGTTAGGTATGTCGCAACGGATTTGGCAACAGACATCATTGTTAATGTTGGAGATTCAAAGTTTTTTCTACATAAGTTTCCTCTTCTATCAAAGAGTGCTCGCTTGCAGAAGTTGGTCGCAAACACTACTGAATCAAACACTGGTGAAATTTATATTTCTGACATTCCTGGTGGCCCTGCTGCCTTTGAGATATGTGCAAAGTTTTGTTATGGCATGACTGTTACCCTCAATGCTTACAATGTTGTTGTGTCTCGCTGCGCGGCTGAATATCTGGGGATGCATGAGTCTATCGAGAAAAGAAATCTCATTTACAAGATTGATGTCTTCCTTAGCTCTAGCATTTTCCGGAGCTGGAAGGATTCCATCATTGTTCTTCAGACTACAAAGTCTCTTTTACCGATATCTGAGGAACTGAAGTTGGTTAGCCATTGCATTGACTCTGTTGCCACTAAGGCCTGCATGGATGTTTCAAAAGTTGACTGGTCCTATACCTATAACCGGAAGAAGATCCAAGAGGAAAATGGGAATGATCCAAATTGGAATGGTGTCAGAAAGCGTCCAGTTCCAAAAGACTGGTGGGTTGAAGAATTGTGTGAGCTTGAGATTGATTTGTACAAGCGTGTTCTAGCGAATATTAAAAACAAAGGGGTACTATCTGGTGAAGTGATCGGAGAGGGCTTGAAAGCTTACGCTTACAGAAGGTTGCCAGGTTTCAGCAAAGGTATGATCCAGGATGGAGATATGACAAAGCATCGATCAGCAGTGGATGCAATTGTCTGGCTGTTGCCTGAAGAGAAAGGCAGTGTCTCTTGTAGTTTCTTGCACAAAATGTTGAAAGCAGCTATATTTGTGGACTCTGGAGACACGGCTAAGGGAGAGCTGGTAAGGAGAATAGGGCAGCAACTGGAAGAGGCTTCGGTAAATGATCTTTTGATACGAGCAGCGGAAGGAGAACCTTCTGTTTATGATGTTACTGTAGTCCAAAAAATAGTAGAAGAGTTTCTAAGGCAAGGTCGAAGTCCAGAGATTGAATCACTAGATGAAGGCGATAAACTTCAGGAGGTGAGAAGGCCAGGGATATTGTCAGATGCTTCCAAGCTGATGGTGGCAAAACTGATAGATGGGTATCTTGCTGAAATTTCAAAGGATCGCTGCCTACCCTTGTCGAAGTTTGTTGATCTTGCGGAGATGGTAAAAGGTTTCTCTCGACCTTCTCACGATGGACTTTACCGAGCCATTGACATGTACCTTAAGGAGCACCCAGGGATCAGCAAGAGTGAGAGGAAGAAGATATGCAAGCTGATGGACTGCAAAAAGTTATCTGTAGACGCGTGTGTGCATGCAGTGCAAAATGAGAGACTTCCGCTGCGTGTAGTTGTGCAGGTACTATTTTTTGAGCAAGTCAGGGCTGCTGCTTCATCAGGCAGCAGCACTCCTGACCTACCTAAAGGCATGAAGGATTTAAACAGTGGGTCCCATGGTAGCTCAAGATCTGCAACAACCAACACGGAGGAGGATTGGGATGCAGTAGCGTCGGCTGAGGAGCTTAGAGCCCTAAAGGGGGAGCTAGCTTCTTTAAGGTTGAGCAGTGGTGTGGGATTGTGCGACAGGAATGGAGATGGGAAAGGCAGTGTTGACAAGGCGGCGGTAAGTAAAATGAGAGGGTTGCTCAAGTCAAAGAAGAAGATTTTTGCAAAGCTTTGGTCAAGCAAAGGGGTACAAGGTGAGAACAGTGGCTCTGATTCATCCGAGAGTCTTGGTTCGGGTAATCCTGAAGAGGCCAAATCTACACCTTCGAGAAATAGGAGGCATTCGGTTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009958 GO:0044464 GO:0050896 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

627

Amino Acids

69.1

Weight (kDa)

8.59

Isoelectric Point (pI)

42.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	28 - 118	2.4e-06	BTB/POZ domain
NPH3	PF03000	210 - 464	5.6e-87	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14820 AT2G14820
fragaria_vesca	FvH4_2g04110 FvH4_2g04110 FvH4_2g04110 FvH4_2g04110
malus_domestica	MD05G1098200.v1.1 MD10G1103900.v1.1
prunus_persica	Prupe.8G142300_v2.0.a1 Prupe.8G142300_v2.0.a1 Prupe.8G142300_v2.0.a1
pyrus_communis	pycom05g09610 pycom10g08930
rosa_chinensis	RchiOBHm_Chr6g0253481
rosa_laevigata	RLG00000015016
rosa_multiflora	Rmu_sc0030462.1_g000001 Rmu_ssc0000079.1_g000008
rosa_roxburghii	Rroxscaffold_7G00211860
rosa_rugosa	Rorug05G0544500 Rorug05G0544600 Rorug05G0544700 Rorug05G0544700
rosa_samantha	Rh3CG324600 Rh3DG323200 Rh6AG059600 Rh6BG053600 Rh6CG050700 Rh6DG047400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	442
Acc36I	ACCTGC	1 cut(s)	1429
AccI	GTMKAC	1 cut(s)	1383
AccII	CGCG	2 cut(s)	317, 1388
AccIII	TCCGGA	1 cut(s)	402
AciI	CCGC	6 cut(s)	317, 1001, 1241, 1421, 1700, 1703
AclWI	GGATC	6 cut(s)	28, 559, 581, 778, 1212, 1331
AcsI	RAATTY	2 cut(s)	204, 1194
AcuI	CTGAAG	5 cut(s)	416, 491, 867, 1097, 1851
AfaI	GTAC	5 cut(s)	671, 708, 1304, 1443, 1776
AfiI	CCNNNNNNNGG	3 cut(s)	555, 1617, 1618
AflII	CTTAAG	1 cut(s)	1307
AflIII	ACRYGT	2 cut(s)	1299, 1386
AgsI	TTSAA	7 cut(s)	114, 528, 641, 739, 892, 1088, 1200
AjnI	CCWGG	5 cut(s)	223, 763, 786, 1129, 1318
Alw21I	GWGCWC	2 cut(s)	157, 1317
Alw26I	GTCTC	5 cut(s)	312, 450, 868, 912, 1408
AlwI	GGATC	6 cut(s)	28, 559, 581, 778, 1212, 1331
AlwNI	CAGNNNCTG	1 cut(s)	961
Aor13HI	TCCGGA	1 cut(s)	402
AoxI	GGCC	4 cut(s)	229, 510, 1127, 1836
ApoI	RAATTY	2 cut(s)	204, 1194
ArsI	GACNNNNNNTTYG	2 cut(s)	1745, 1777
Asp700I	GAANNNNTTC	1 cut(s)	1056
AspLEI	GCGC	1 cut(s)	317
AspS9I	GGNCC	3 cut(s)	230, 540, 1530
AsuHPI	GGTGA	4 cut(s)	212, 728, 1132, 1793
AsuNHI	GCTAGC	1 cut(s)	1624
AvaII	GGWCC	2 cut(s)	540, 1530
BanII	GRGCYC	1 cut(s)	1612
BbsI	GAAGAC	1 cut(s)	373
Bbv12I	GWGCWC	2 cut(s)	157, 1317
BbvCI	CCTCAGC	1 cut(s)	1596
BccI	CCATC	9 cut(s)	41, 428, 785, 1153, 1172, 1240, 1271, 1354, 1670
BceAI	ACGGC	1 cut(s)	939
BcgI	CGANNNNNNTGC	2 cut(s)	1572, 1606
BciT130I	CCWGG	5 cut(s)	225, 765, 788, 1131, 1320
BcoDI	GTCTC	5 cut(s)	312, 450, 868, 912, 1408
BfaI	CTAG	4 cut(s)	393, 683, 1094, 1625
BfmI	CTRYAG	2 cut(s)	1032, 1380
BfrI	CTTAAG	1 cut(s)	1307
BfuAI	ACCTGC	1 cut(s)	1429
BglI	GCCNNNNNGGC	1 cut(s)	509
BglII	AGATCT	1 cut(s)	1547
Bme1390I	CCNGG	5 cut(s)	225, 765, 788, 1131, 1320
Bme18I	GGWCC	2 cut(s)	540, 1530
BmgT120I	GGNCC	3 cut(s)	230, 540, 1530
BmiI	GGNNCC	2 cut(s)	1531, 1532
BmrFI	CCNGG	5 cut(s)	225, 765, 788, 1131, 1320
BmsI	GCATC	5 cut(s)	324, 814, 817, 1135, 1570
BmtI	GCTAGC	1 cut(s)	1628
BpiI	GAAGAC	1 cut(s)	373
BplI	GAGNNNNNCTC	2 cut(s)	1710, 1742
BpmI	CTGGAG	1 cut(s)	936
Bpu10I	CCTNAGC	3 cut(s)	386, 927, 1596
BpuEI	CTTGAG	3 cut(s)	677, 1528, 1712
Bsa29I	ATCGAT	1 cut(s)	811
BsaBI	GATNNNNATC	1 cut(s)	1182
BsaJI	CCNNGG	4 cut(s)	1130, 1318, 1319, 1534
BsaWI	WCCGGW	2 cut(s)	402, 555
BsaXI	ACNNNNNCTCC	2 cut(s)	924, 954
Bsc4I	CCNNNNNNNGG	3 cut(s)	555, 1617, 1618
Bse1I	ACTGG	5 cut(s)	202, 542, 617, 635, 966
Bse3DI	GCAATG	1 cut(s)	484
Bse8I	GATNNNNATC	1 cut(s)	1182
BseAI	TCCGGA	1 cut(s)	402
BseBI	CCWGG	5 cut(s)	225, 765, 788, 1131, 1320
BseCI	ATCGAT	1 cut(s)	811
BseDI	CCNNGG	4 cut(s)	1130, 1318, 1319, 1534
BseGI	GGATG	6 cut(s)	339, 526, 796, 829, 1585, 1802
BseJI	GATNNNNATC	1 cut(s)	1182
BseLI	CCNNNNNNNGG	3 cut(s)	555, 1617, 1618
BseMI	GCAATG	1 cut(s)	484
BseMII	CTCAG	2 cut(s)	453, 1587
BseNI	ACTGG	5 cut(s)	202, 542, 617, 635, 966
BseRI	GAGGAG	2 cut(s)	1583, 1613
BsgI	GTGCAG	1 cut(s)	1457
Bsh1236I	CGCG	2 cut(s)	317, 1388
BshFI	GGCC	4 cut(s)	231, 512, 1129, 1838
BshVI	ATCGAT	1 cut(s)	811
BsiHKAI	GWGCWC	2 cut(s)	157, 1317
BsiSI	CCGG	3 cut(s)	29, 403, 556
BslFI	GGGAC	1 cut(s)	1516
BslI	CCNNNNNNNGG	3 cut(s)	555, 1617, 1618
BsmAI	GTCTC	5 cut(s)	312, 450, 868, 912, 1408
BsmFI	GGGAC	1 cut(s)	1516
BsmI	GAATGC	1 cut(s)	1867
BsnI	GGCC	4 cut(s)	231, 512, 1129, 1838
Bsp1286I	GDGCHC	3 cut(s)	157, 1317, 1612
Bsp13I	TCCGGA	1 cut(s)	402
Bsp1407I	TGTACA	1 cut(s)	669
Bsp19I	CCATGG	1 cut(s)	1534
BspACI	CCGC	6 cut(s)	317, 1001, 1241, 1421, 1700, 1703
BspANI	GGCC	4 cut(s)	231, 512, 1129, 1838
BspCNI	CTCAG	2 cut(s)	454, 1588
BspDI	ATCGAT	1 cut(s)	811
BspEI	TCCGGA	1 cut(s)	402
BspFNI	CGCG	2 cut(s)	317, 1388
BspLI	GGNNCC	2 cut(s)	1531, 1532
BspMI	ACCTGC	1 cut(s)	1429
BspOI	GCTAGC	1 cut(s)	1628
BspPI	GGATC	6 cut(s)	28, 559, 581, 778, 1212, 1331
BspTI	CTTAAG	1 cut(s)	1307
BsrDI	GCAATG	1 cut(s)	484
BsrGI	TGTACA	1 cut(s)	669
BsrI	ACTGG	5 cut(s)	202, 542, 617, 635, 966
BssECI	CCNNGG	4 cut(s)	1130, 1318, 1319, 1534
BssT1I	CCWWGG	1 cut(s)	1534
Bst2UI	CCWGG	5 cut(s)	225, 765, 788, 1131, 1320
Bst4CI	ACNGT	4 cut(s)	277, 1033, 1526, 1790
Bst6I	CTCTTC	5 cut(s)	144, 843, 960, 1047, 1827
BstAFI	CTTAAG	1 cut(s)	1307
BstAPI	GCANNNNNTGC	2 cut(s)	824, 1402
BstAUI	TGTACA	1 cut(s)	669
BstC8I	GCNNGC	6 cut(s)	157, 161, 514, 1355, 1398, 1626
BstDEI	CTNAG	8 cut(s)	386, 462, 507, 927, 1061, 1596, 1604, 1878
BstDSI	CCRYGG	1 cut(s)	1534
BstF5I	GGATG	6 cut(s)	339, 526, 796, 829, 1585, 1802
BstFNI	CGCG	2 cut(s)	317, 1388
BstHHI	GCGC	1 cut(s)	317
BstMAI	GTCTC	5 cut(s)	312, 450, 868, 912, 1408
BstMWI	GCNNNNNNNGC	3 cut(s)	509, 824, 1402
BstNI	CCWGG	5 cut(s)	225, 765, 788, 1131, 1320
BstNSI	RCATGY	2 cut(s)	1303, 1400
BstSCI	CCNGG	5 cut(s)	223, 763, 786, 1129, 1318
BstSFI	CTRYAG	2 cut(s)	1032, 1380
BstUI	CGCG	2 cut(s)	317, 1388
BstV2I	GAAGAC	1 cut(s)	373
BstX2I	RGATCY	2 cut(s)	564, 1547
BstXI	CCANNNNNNTGG	2 cut(s)	630, 1159
BstYI	RGATCY	2 cut(s)	564, 1547
Bsu15I	ATCGAT	1 cut(s)	811
BsuRI	GGCC	4 cut(s)	231, 512, 1129, 1838
BsuTUI	ATCGAT	1 cut(s)	811
BtgI	CCRYGG	1 cut(s)	1534
BtsCI	GGATG	6 cut(s)	339, 526, 796, 829, 1585, 1802
BtsI	GCAGTG	5 cut(s)	825, 865, 1407, 1651, 1693
BtsIMutI	CAGTG	8 cut(s)	195, 825, 865, 1407, 1531, 1651, 1693, 1795
BveI	ACCTGC	1 cut(s)	1429
Cac8I	GCNNGC	6 cut(s)	157, 161, 514, 1355, 1398, 1626
CaiI	CAGNNNCTG	1 cut(s)	961
CfoI	GCGC	1 cut(s)	317
Cfr13I	GGNCC	3 cut(s)	230, 540, 1530
ClaI	ATCGAT	1 cut(s)	811
CseI	GACGC	3 cut(s)	602, 1394, 1578
Csp6I	GTAC	5 cut(s)	670, 707, 1303, 1442, 1775
CviAII	CATG	7 cut(s)	271, 338, 517, 1300, 1397, 1510, 1535
CviQI	GTAC	5 cut(s)	670, 707, 1303, 1442, 1775
DdeI	CTNAG	8 cut(s)	386, 462, 507, 927, 1061, 1596, 1604, 1878
DraI	TTTAAA	1 cut(s)	1521
DrdI	GACNNNNNNGTC	1 cut(s)	442
DseDI	GACNNNNNNGTC	1 cut(s)	442
Eam1104I	CTCTTC	5 cut(s)	144, 843, 960, 1047, 1827
EarI	CTCTTC	5 cut(s)	144, 843, 960, 1047, 1827
Eco130I	CCWWGG	1 cut(s)	1534
Eco147I	AGGCCT	1 cut(s)	512
Eco24I	GRGCYC	1 cut(s)	1612
Eco32I	GATATC	1 cut(s)	459
Eco47I	GGWCC	2 cut(s)	540, 1530
Eco57I	CTGAAG	5 cut(s)	416, 491, 867, 1097, 1851
EcoO109I	RGGNCCY	1 cut(s)	1530
EcoRII	CCWGG	5 cut(s)	223, 763, 786, 1129, 1318
EcoRV	GATATC	1 cut(s)	459
EcoT14I	CCWWGG	1 cut(s)	1534
EcoT22I	ATGCAT	1 cut(s)	339
EcoT38I	GRGCYC	1 cut(s)	1612
ErhI	CCWWGG	1 cut(s)	1534
FaeI	CATG	7 cut(s)	274, 341, 520, 1303, 1400, 1513, 1538
FaqI	GGGAC	1 cut(s)	1516
FatI	CATG	7 cut(s)	270, 337, 516, 1299, 1396, 1509, 1534
FblI	GTMKAC	1 cut(s)	1383
FokI	GGATG	6 cut(s)	346, 533, 803, 836, 1592, 1789
FriOI	GRGCYC	1 cut(s)	1612
FspBI	CTAG	4 cut(s)	393, 683, 1094, 1625
GlaI	GCGC	1 cut(s)	316
GsuI	CTGGAG	1 cut(s)	936
HaeIII	GGCC	4 cut(s)	231, 512, 1129, 1838
HapII	CCGG	3 cut(s)	29, 403, 556
HgaI	GACGC	3 cut(s)	602, 1394, 1578
HhaI	GCGC	1 cut(s)	317
Hin1II	CATG	7 cut(s)	274, 341, 520, 1303, 1400, 1513, 1538
Hin6I	GCGC	1 cut(s)	315
HinP1I	GCGC	1 cut(s)	315
HincII	GTYRAC	2 cut(s)	535, 1693
HindII	GTYRAC	2 cut(s)	535, 1693
HindIII	AAGCTT	2 cut(s)	741, 1754
HpaII	CCGG	3 cut(s)	29, 403, 556
HphI	GGTGA	4 cut(s)	212, 728, 1132, 1793
Hpy166II	GTNNAC	4 cut(s)	535, 910, 1384, 1693
Hpy188I	TCNGA	9 cut(s)	42, 217, 435, 463, 608, 728, 1144, 1798, 1807
Hpy8I	GTNNAC	4 cut(s)	535, 910, 1384, 1693
Hpy99I	CGWCG	1 cut(s)	1594
HpyAV	CCTTC	9 cut(s)	406, 750, 998, 1023, 1094, 1119, 1278, 1507, 1860
HpyCH4III	ACNGT	4 cut(s)	277, 1033, 1526, 1790
HpyF10VI	GCNNNNNNNGC	3 cut(s)	509, 824, 1402
HpyF3I	CTNAG	8 cut(s)	386, 462, 507, 927, 1061, 1596, 1604, 1878
Hsp92II	CATG	7 cut(s)	274, 341, 520, 1303, 1400, 1513, 1538
HspAI	GCGC	1 cut(s)	315
KflI	GGGWCCC	1 cut(s)	1530
Kpn2I	TCCGGA	1 cut(s)	402
LmnI	GCTCC	4 cut(s)	405, 1312, 1600, 1621
LweI	GCATC	5 cut(s)	324, 814, 817, 1135, 1570
MaeI	CTAG	4 cut(s)	393, 683, 1094, 1625
MaeIII	GTNAC	2 cut(s)	277, 1027
MfeI	CAATTG	1 cut(s)	828
MflI	RGATCY	2 cut(s)	564, 1547
MhlI	GDGCHC	3 cut(s)	157, 1317, 1612
MluCI	AATT	5 cut(s)	204, 592, 644, 828, 1194
MluI	ACGCGT	1 cut(s)	1386
MlyI	GAGTC	4 cut(s)	350, 488, 905, 1819
MmeI	TCCRAC	1 cut(s)	85
Mph1103I	ATGCAT	1 cut(s)	339
MroI	TCCGGA	1 cut(s)	402
MroXI	GAANNNNTTC	1 cut(s)	1056
MseI	TTAA	5 cut(s)	99, 693, 1308, 1520, 1634
MslI	CAYNNNNRTG	1 cut(s)	1298
MspA1I	CMGCKG	2 cut(s)	1001, 1423
MspCI	CTTAAG	1 cut(s)	1307
MspI	CCGG	3 cut(s)	29, 403, 556
MspR9I	CCNGG	5 cut(s)	225, 765, 788, 1131, 1320
MunI	CAATTG	1 cut(s)	828
Mva1269I	GAATGC	1 cut(s)	1867
MvaI	CCWGG	5 cut(s)	225, 765, 788, 1131, 1320
MvnI	CGCG	2 cut(s)	317, 1388
MwoI	GCNNNNNNNGC	3 cut(s)	509, 824, 1402
NcoI	CCATGG	1 cut(s)	1534
NheI	GCTAGC	1 cut(s)	1624
NlaIII	CATG	7 cut(s)	274, 341, 520, 1303, 1400, 1513, 1538
NlaIV	GGNNCC	2 cut(s)	1531, 1532
NsiI	ATGCAT	1 cut(s)	339
NspI	RCATGY	2 cut(s)	1303, 1400
PaeI	GCATGC	1 cut(s)	1400
PasI	CCCWGGG	1 cut(s)	1319
PceI	AGGCCT	1 cut(s)	512
PciI	ACATGT	1 cut(s)	1299
PctI	GAATGC	1 cut(s)	1867
PdmI	GAANNNNTTC	1 cut(s)	1056
PfeI	GAWTC	6 cut(s)	32, 110, 188, 416, 1088, 1799
PfoI	TCCNGGA	1 cut(s)	786
PleI	GAGTC	4 cut(s)	349, 488, 905, 1818
PpsI	GAGTC	4 cut(s)	349, 488, 905, 1818
PpuMI	RGGWCCY	1 cut(s)	1530
PscI	ACATGT	1 cut(s)	1299
Psp5II	RGGWCCY	1 cut(s)	1530
Psp6I	CCWGG	5 cut(s)	223, 763, 786, 1129, 1318
PspGI	CCWGG	5 cut(s)	223, 763, 786, 1129, 1318
PspN4I	GGNNCC	2 cut(s)	1531, 1532
PspPI	GGNCC	3 cut(s)	230, 540, 1530
PspPPI	RGGWCCY	1 cut(s)	1530
PstNI	CAGNNNCTG	1 cut(s)	961
PsuI	RGATCY	2 cut(s)	564, 1547
RsaI	GTAC	5 cut(s)	671, 708, 1304, 1443, 1776
RsaNI	GTAC	5 cut(s)	670, 707, 1303, 1442, 1775
RseI	CAYNNNNRTG	1 cut(s)	1298
SaqAI	TTAA	5 cut(s)	99, 693, 1308, 1520, 1634
Sau96I	GGNCC	3 cut(s)	230, 540, 1530
SchI	GAGTC	4 cut(s)	350, 488, 905, 1819
ScrFI	CCNGG	5 cut(s)	225, 765, 788, 1131, 1320
SduI	GDGCHC	3 cut(s)	157, 1317, 1612
SfaNI	GCATC	5 cut(s)	324, 814, 817, 1135, 1570
SfcI	CTRYAG	2 cut(s)	1032, 1380
SinI	GGWCC	2 cut(s)	540, 1530
SmiMI	CAYNNNNRTG	1 cut(s)	1298
SmlI	CTYRAG	4 cut(s)	656, 1307, 1543, 1727
SmoI	CTYRAG	4 cut(s)	656, 1307, 1543, 1727
SphI	GCATGC	1 cut(s)	1400
Sse9I	AATT	5 cut(s)	204, 592, 644, 828, 1194
SseBI	AGGCCT	1 cut(s)	512
SsiI	CCGC	6 cut(s)	317, 1001, 1241, 1421, 1700, 1703
SspI	AATATT	1 cut(s)	691
SspMI	CTAG	4 cut(s)	393, 683, 1094, 1625
StuI	AGGCCT	1 cut(s)	512
StyD4I	CCNGG	5 cut(s)	223, 763, 786, 1129, 1318
StyI	CCWWGG	1 cut(s)	1534
TaaI	ACNGT	4 cut(s)	277, 1033, 1526, 1790
TaqI	TCGA	7 cut(s)	23, 348, 811, 1072, 1223, 1264, 1853
TasI	AATT	5 cut(s)	204, 592, 644, 828, 1194
TatI	WGTACW	1 cut(s)	669
TauI	GCSGC	2 cut(s)	320, 1703
TfiI	GAWTC	6 cut(s)	32, 110, 188, 416, 1088, 1799
Tru1I	TTAA	5 cut(s)	99, 693, 1308, 1520, 1634
Tru9I	TTAA	5 cut(s)	99, 693, 1308, 1520, 1634
TscAI	CASTG	8 cut(s)	202, 825, 865, 1407, 1531, 1651, 1693, 1795
TspDTI	ATGAA	6 cut(s)	17, 26, 1113, 1464, 1526, 1791
TspGWI	ACGGA	2 cut(s)	89, 1580
TspRI	CASTG	8 cut(s)	202, 825, 865, 1407, 1531, 1651, 1693, 1795
Vha464I	CTTAAG	1 cut(s)	1307
VpaK11BI	GGWCC	2 cut(s)	540, 1530
XapI	RAATTY	2 cut(s)	204, 1194
XceI	RCATGY	2 cut(s)	1303, 1400
XcmI	CCANNNNNNNNNTGG	3 cut(s)	575, 630, 1159
XmiI	GTMKAC	1 cut(s)	1383
XmnI	GAANNNNTTC	1 cut(s)	1056
XspI	CTAG	4 cut(s)	393, 683, 1094, 1625
Zsp2I	ATGCAT	1 cut(s)	339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.