Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0007786

Physical Location & Seq

Genomic Coordinates Reverse (-)

13692407 .. 13696292

Gene Structure 3886 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3795 bp

ATGGAAAATGGTGATAAGATTGCCGGTGGGTCTGAAGTGGGGGAGAACAAGGGTGTGGATGTTGAGGTTGTTGAGGAGAGGGTTGTAGAGGGGTCTAATGGACTCAAGGATGATGCGGAAGATGAGGTTTTCGAGGAGGCAATAGAGACGCAGGAGAATTTGCTGGAGCAGGGCAGTAAAGATGGTTTAGTGGATGCTGCTGTTGTTGGTGAAGAAAGAGAGACTGAGACAGTTGGTGGCTTAGGGTTGGCGTCTCCTATTGAGAGTCCTAGTGTCGAGACATTTCAAGAGGCAATTGAAGTTCCTGATGAGGTTGGGAAATCTGATGATGATGATGATGATGATGATGATGCTGAAGTGAAGGTGGAAAATATTGTGGGTGGGAACAGCGATGATGAGGTTGGAGTGGCAGGCGGAATTGATGATGAACAGACTAAAAAGGAAGCAGTCACTGAGGAAACAAATGGATTGACAGATGATGGGTTGGTGGGCAGCCAAGAAGATGGAGTAAAAGAAGTTACTCAGGTTGAGGCTGGTGGAGGAATATCAGGTTTGACAGGTGGGGATGAGGCTGATGTAAAGTCTGTAGTTCTCGAGAATGTGAAGTTTAAAAAAGACAATTTTGATTTAAATGGACTTGCGGATGGTGGCTTGGTGGGGAGCCAAGACGTTGAGGTGAAAGAAGTATCTGAGATTATTACTGGTGCGGAAATAGTAGGTTTGACAAATGTGGGTGAGGTTGATTCAAAGCCTAATGTTGTTCTTGAAAATAAGGAGCCCGAGAAGGATGATCTTGATAATTCAACTTCAGAGCCAGTATCTACAGATGAAAAATTAGATACTGAAGATCTTGATTCTCCTCAAGTAACTGAATTTAATAAGGAGATTTTGAAGGAAGCTGGTAATGGTCAGGAGTTAGAGGAGAATTCCTTGAGCATAGAGAATCAGGATGAGAAGACTGTGGATCTAGTAAGTGCTTCAGATGGCGTTCCTTTGAAGCTTGAAGATGATAACAGTGTGGAACTGCTTGATAGAAACATGGATACAGTGCATCAGGAAGGTGATAGTGCTGAATCAAATGATGCCACGCTTGGCATTGAAGAAAAGCAGGAGTATAATAAGACTGAAGAACTGAGAGATACTTTGACTTTTACAGATGCAGAACATGAAGGTTTCAGTAATGGGGAAGTGAAAAACTCTTTCACTGTGCTGGGTTCAGAGCATCACGAGGAAAAATCTGAACCAAAAAGCATTTCATCTGATAAACAACTGTCTGGGGAGGATAGTGAGGAAATGATTGTTACGTCAGAAAGGGAGATCTCAGCTCTTTCTGAAAGATCTGCAGCTGAGAAGACAGAGAAGATTCAGGATGGTCGAGCTGATGAAATTGCTCCTGAAGTTCGAGACAACATTGCTGTGCCTGAAGAGCGTGAAAAGAAAGAAAACCTTCAGGCAGAAAAGGGAGTCACAAAAGTGAACAAAGAACAAGAGATTCAGCCTGTATCAGCTCTTTCTTCATCTGGAAATCCTACACAACCAAGTCCCCCTCCTGCTCGTCCAGCTGGCCTTGGGCGTGCTGCCCCACTATTGGAACCTGCGCCTAGGGTGGTCCAGCATCCTCGAGTAAATGGTACAGTATCTCATGCTCAAAACCAGCAAATTGAGGACCCCGTTAATGGAGAGACAGAGGAGTCTGATGAGACGCGTGAAAAGCTTCAGATGATAAGAGTGAAATTTTTACGTCTTGCACATAGACTTGGGCAGACTCCGCATAATGTTGTTGTGGCTCAGGTTTTGTACAGATTGGGATTAGCTGAGCAGCTGCGTGGTAGAAATGGGGGCCGTGTTGGTGCCTTTAGTTTTGACCGTGCAAGTGCCATGGCGGAACAGCTTGAGGCATCAGGGAATGAACCCCTTGATTTTGCTTGTACCATTATGGTTCTTGGAAAGTCAGGAGTTGGTAAAAGTGCAACCATCAATTCTATATTTGATGAAAACAGGTTCGCCACTGATGCTTTTCAGATGGGGACAAAGAAAGTTCAGGATCTTGTGGGTACTGTGCAAGGGATTAAGGTACGGGTCATTGACACACCTGGACTTTTACCTTCCTGGTCGGACCAGCGACAGAATGAGAAGACTCTCCTAAATGTTAGGCGCTTTATCAAGAAAACACCTCCAGATATTGTGTTGTATCTTGATAGGTTGGACATGCAGAGCAGGGATTTCAGTGATATGCCACTCTTGCGCACCATCACAGACATTTTTGGGCCCTCTATATGGTTCAATGCAATTGTGGTTCTGACTCATGCTGGATCAGCTCCACCTGAGGGCCCAAATGGTGCTGCTTCTAGTTATGACATGTTTGTCACTTCACGATCTCATGTTGTTCAGCAAGCCATTCGTCAGGCAGCTGGGGATATGCGCCTCATGAATCCTGTTTCATTAGTAGAGAACCACTCTGCTTGCAGAACTAATAGGGCTGGGCAAAGAGTCCTGCCAAATGGTCAGGTTTGGAAACCTCATTTGTTATTGCTCTCCTTTGCATCCAAGATTCTGGCTGAAGCAAATGCATTATTGAAGTTGCAAGATAGTCCACCAGGAAAACCTTTTGCGACTCGAACTAGGGCACCTCCTTTACCTTTCTTGCTTTCATCACTCCTTCAGTCAAGACCACAGTTGAAGCTGCCTGAGGAGCAGTTTGGTGACGATGACAATTCTGATGATGAATCAGAATTTGATGAATTGCCCCCATTCAGACGTTTGACCAAGGCCCAGGTGGAAAAACTCTCAAAAGCCCAAAAAAAGGCATATTTTGATGAGTTAGAGTACAGGGAAAAGCTCTTTATGAAGAAACAGTTGAAGGAGGAGAAAAAGCGGCGGAAGTTGATGAAGAAAATGGCAGCTGCATCAAACGAACTGCCAAGTGATTATGTCGAAAATGTAGAAGAAGAAAGTTCTGGTGCAGCATCTGTACCTATTCCCATGCCAGATTTGGCATTGCCTGCTTCCTTTGATTCTGATAATCCTACTCACCGTTACCGGTATCTAGATTCCTCCAACCAGTGGCTCGTAAGACCTGTTCTGGAACAGCATGGTTGGGATCATGATGTTGGTTATGAGGGTATAAATGCAGAAAGACTGTTTGTTGTTAAAGAAAAGATACCCTTATCTTTTTCTGGCCAGGTTACCAAGGATAAGAAGGACGCCAATGTCCAAATGGAAATTGCTACTTCAATAAAGCATGGAGAAGGGAAAGCTACTTCATTAGGGTTTGATATGCAGACTGTTGGAAAGGACTTGGCTTATACTCTACGAAGTGACTCAAGGATCAGTAACTTTAGGAAGAATAAGGCTACTGCTGGTCTCTCAGTTACTCTCCTGGGTGATGCTCTATCGGCTGGTATGAAAGTTGAAGACAAATTTGTTGCTAATAAACGGTTCCAATTGGTTATGACTGGTGGTGCAATGACTGCGCGTGGTGATGTTGCTTATGGTGGTAGTTTGGAGGCTCAGTTGAGAGACAAAGACCATCCTTTGGGTCGTTCCCTATCAACCCTTGGGCTCTCTGTCATGGATTGGCATGGAGATCTTGCCATAGGGTGCAATATACAGTCTCAGATTCCAGTTGGACGGCATACGAACCTGATTGCTCGTGCCAATTTGAACAATAGAGGGGCAGGACAACTCAGCTTGCGCTTAAATAGCTCGGAACAGCTTCAATTAGCATTGATCGGCCTCGTTCCTCTGCTCAGAAAGTTGTTCACTTTTCCTCAACAGTTGCAGTATGGACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0019867 GO:0019899 GO:0023052 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0038023 GO:0042170 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051087 GO:0051117 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060089 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

1265

Amino Acids

138.07

Weight (kDa)

4.65

Isoelectric Point (pI)

41.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AIG1	PF04548	643 - 790	8.2e-25	AIG1 family
MMR_HSR1	PF01926	645 - 731	4.9e-09	50S ribosome-binding GTPase
TOC159_MAD	PF11886	991 - 1254	2.4e-125	Translocase of chloroplast 159/132, membrane anchor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16640 AT2G16640 AT2G16640 AT3G16620
fragaria_vesca	FvH4_2g01650 FvH4_2g01650
malus_domestica	MD05G1117800.v1.1 MD10G1120800.v1.1
prunus_persica	Prupe.8G162300_v2.0.a1 Prupe.8G162300_v2.0.a1
pyrus_communis	pycom05g11180 pycom10g10400
rosa_chinensis	RchiOBHm_Chr6g0244541
rosa_laevigata	RLG00000015350
rosa_multiflora	Rmu_co8516985.1_g000001 Rmu_sc0003679.1_g000009 Rmu_sc0017888.1_g000001
rosa_roxburghii	Rroxscaffold_7G00215770
rosa_rugosa	Rorug05G0509200
rosa_samantha	Rh6AG024900 Rh6BG019800 Rh6CG017300 Rh6DG018300
rosa_wichuraiana	Rw6G002030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	1690, 2363, 3209
Acc16I	TGCGCA	1 cut(s)	2246
Acc36I	ACCTGC	1 cut(s)	1603
AccB1I	GGYRCC	2 cut(s)	1850, 2626
AccB7I	CCANNNNNTGG	2 cut(s)	3063, 3535
AccII	CGCG	2 cut(s)	1705, 3475
AciI	CCGC	8 cut(s)	116, 414, 641, 707, 1769, 1883, 2875, 2878
AclWI	GGATC	5 cut(s)	972, 2052, 2320, 3108, 3335
AcoI	YGGCCR	1 cut(s)	3178
AcsI	RAATTY	6 cut(s)	157, 872, 925, 1733, 2732, 3419
AcyI	GRCGYC	2 cut(s)	251, 3204
AfaI	GTAC	7 cut(s)	1633, 1799, 1930, 2056, 2076, 2828, 2973
AfiI	CCNNNNNNNGG	7 cut(s)	1588, 1676, 2277, 2327, 2803, 3063, 3535
AflIII	ACRYGT	2 cut(s)	1703, 2358
AgeI	ACCGGT	1 cut(s)	3039
AjnI	CCWGG	6 cut(s)	2092, 2108, 2596, 2772, 3180, 3378
AjuI	GAANNNNNNNTTGG	2 cut(s)	1237, 1269
AleI	CACNNNNGTG	1 cut(s)	1472
AlwI	GGATC	5 cut(s)	972, 2052, 2320, 3108, 3335
AlwNI	CAGNNNCTG	2 cut(s)	452, 2969
Ama87I	CYCGRG	3 cut(s)	593, 779, 1620
AoxI	GGCC	7 cut(s)	1564, 1840, 2267, 2329, 2769, 3178, 3733
ApaI	GGGCCC	2 cut(s)	2271, 2333
ApoI	RAATTY	6 cut(s)	157, 872, 925, 1733, 2732, 3419
AsiGI	ACCGGT	1 cut(s)	3039
Asp700I	GAANNNNTTC	3 cut(s)	1446, 1713, 3714
AspA2I	CCTAGG	1 cut(s)	1601
AspLEI	GCGC	6 cut(s)	1600, 2157, 2247, 2424, 3475, 3696
AspS9I	GGNCC	9 cut(s)	1609, 1666, 1840, 2116, 2267, 2268, 2329, 2330, 2770
AsuHPI	GGTGA	9 cut(s)	23, 221, 688, 746, 1073, 2714, 3023, 3395, 3491
AvaI	CYCGRG	3 cut(s)	593, 779, 1620
AvaII	GGWCC	3 cut(s)	1609, 1666, 2116
AvrII	CCTAGG	1 cut(s)	1601
AxyI	CCTNAGG	2 cut(s)	2325, 2688
BaeGI	GKGCMC	3 cut(s)	2271, 2333, 2629
BalI	TGGCCA	1 cut(s)	3180
BanI	GGYRCC	2 cut(s)	1850, 2626
BanII	GRGCYC	4 cut(s)	780, 2271, 2333, 3564
BauI	CACGAG	2 cut(s)	1226, 3651
BbsI	GAAGAC	4 cut(s)	962, 1358, 2141, 3420
BceAI	ACGGC	2 cut(s)	1827, 3647
BcgI	CGANNNNNNTGC	2 cut(s)	2381, 2415
BciT130I	CCWGG	6 cut(s)	2094, 2110, 2598, 2774, 3182, 3380
BciVI	GTATCC	1 cut(s)	1036
BfaI	CTAG	6 cut(s)	270, 968, 1602, 2349, 2622, 3047
BfmI	CTRYAG	3 cut(s)	585, 822, 1341
BfoI	RGCGCY	1 cut(s)	2158
BfuAI	ACCTGC	1 cut(s)	1603
BfuI	GTATCC	1 cut(s)	1036
BglII	AGATCT	4 cut(s)	847, 1317, 1337, 3586
BlnI	CCTAGG	1 cut(s)	1601
BlpI	GCTNAGC	1 cut(s)	1815
Bme1390I	CCNGG	6 cut(s)	2094, 2110, 2598, 2774, 3182, 3380
Bme18I	GGWCC	3 cut(s)	1609, 1666, 2116
BmeT110I	CYCGRG	3 cut(s)	593, 779, 1620
BmgT120I	GGNCC	9 cut(s)	1609, 1666, 1840, 2116, 2267, 2268, 2329, 2330, 2770
BmrFI	CCNGG	6 cut(s)	2094, 2110, 2598, 2774, 3182, 3380
BpiI	GAAGAC	4 cut(s)	962, 1358, 2141, 3420
BplI	GAGNNNNNCTC	2 cut(s)	2441, 2473
BpmI	CTGGAG	2 cut(s)	185, 2160
Bpu10I	CCTNAGC	2 cut(s)	241, 1788
Bpu1102I	GCTNAGC	1 cut(s)	1815
BpuEI	CTTGAG	5 cut(s)	89, 846, 952, 1913, 3307
BsaHI	GRCGYC	2 cut(s)	251, 3204
BsaI	GGTCTC	1 cut(s)	3368
BsaJI	CCNNGG	8 cut(s)	1567, 1601, 1878, 2766, 2772, 3189, 3379, 3556
BsaWI	WCCGGW	1 cut(s)	3039
BsaXI	ACNNNNNCTCC	2 cut(s)	3497, 3527
Bsc4I	CCNNNNNNNGG	7 cut(s)	1588, 1676, 2277, 2327, 2803, 3063, 3535
Bse118I	RCCGGY	2 cut(s)	23, 3039
Bse1I	ACTGG	5 cut(s)	706, 815, 3061, 3460, 3623
Bse21I	CCTNAGG	2 cut(s)	2325, 2688
Bse3DI	GCAATG	3 cut(s)	1410, 2996, 3471
BseBI	CCWGG	6 cut(s)	2094, 2110, 2598, 2774, 3182, 3380
BseDI	CCNNGG	8 cut(s)	1567, 1601, 1878, 2766, 2772, 3189, 3379, 3556
BseLI	CCNNNNNNNGG	7 cut(s)	1588, 1676, 2277, 2327, 2803, 3063, 3535
BseMI	GCAATG	3 cut(s)	1410, 2996, 3471
BseNI	ACTGG	5 cut(s)	706, 815, 3061, 3460, 3623
BseRI	GAGGAG	7 cut(s)	89, 149, 849, 935, 1703, 2705, 2879
BseSI	GKGCMC	3 cut(s)	2271, 2333, 2629
BseYI	CCCAGC	3 cut(s)	1210, 2411, 2480
BsgI	GTGCAG	1 cut(s)	2982
Bsh1236I	CGCG	2 cut(s)	1705, 3475
BshFI	GGCC	7 cut(s)	1566, 1842, 2269, 2331, 2771, 3180, 3735
BshNI	GGYRCC	2 cut(s)	1850, 2626
BshTI	ACCGGT	1 cut(s)	3039
BsiHKCI	CYCGRG	3 cut(s)	593, 779, 1620
BsiSI	CCGG	2 cut(s)	24, 3040
BslFI	GGGAC	2 cut(s)	1527, 2041
BslI	CCNNNNNNNGG	7 cut(s)	1588, 1676, 2277, 2327, 2803, 3063, 3535
BsmBI	CGTCTC	3 cut(s)	140, 258, 1694
BsmFI	GGGAC	2 cut(s)	1527, 2041
BsnI	GGCC	7 cut(s)	1566, 1842, 2269, 2331, 2771, 3180, 3735
Bso31I	GGTCTC	1 cut(s)	3368
BsoBI	CYCGRG	3 cut(s)	593, 779, 1620
Bsp120I	GGGCCC	2 cut(s)	2267, 2329
Bsp1286I	GDGCHC	5 cut(s)	780, 2271, 2333, 2629, 3564
Bsp1407I	TGTACA	1 cut(s)	1797
Bsp1720I	GCTNAGC	1 cut(s)	1815
Bsp19I	CCATGG	1 cut(s)	1878
BspACI	CCGC	8 cut(s)	116, 414, 641, 707, 1769, 1883, 2875, 2878
BspANI	GGCC	7 cut(s)	1566, 1842, 2269, 2331, 2771, 3180, 3735
BspFNI	CGCG	2 cut(s)	1705, 3475
BspHI	TCATGA	2 cut(s)	2427, 3103
BspMAI	CTGCAG	1 cut(s)	1345
BspMI	ACCTGC	1 cut(s)	1603
BspPI	GGATC	5 cut(s)	972, 2052, 2320, 3108, 3335
BspQI	GCTCTTC	1 cut(s)	1419
BspT107I	GGYRCC	2 cut(s)	1850, 2626
BspTNI	GGTCTC	1 cut(s)	3368
BsrDI	GCAATG	3 cut(s)	1410, 2996, 3471
BsrFI	RCCGGY	2 cut(s)	23, 3039
BsrGI	TGTACA	1 cut(s)	1797
BsrI	ACTGG	5 cut(s)	706, 815, 3061, 3460, 3623
BssAI	RCCGGY	2 cut(s)	23, 3039
BssECI	CCNNGG	8 cut(s)	1567, 1601, 1878, 2766, 2772, 3189, 3379, 3556
BssNI	GRCGYC	2 cut(s)	251, 3204
BssSI	CACGAG	2 cut(s)	1226, 3651
BssT1I	CCWWGG	6 cut(s)	1567, 1601, 1878, 2766, 3189, 3556
Bst2BI	CACGAG	2 cut(s)	1226, 3651
Bst2UI	CCWGG	6 cut(s)	2094, 2110, 2598, 2774, 3182, 3380
Bst6I	CTCTTC	1 cut(s)	1419
BstACI	GRCGYC	2 cut(s)	251, 3204
BstAPI	GCANNNNNTGC	2 cut(s)	3002, 3470
BstAUI	TGTACA	1 cut(s)	1797
BstC8I	GCNNGC	7 cut(s)	412, 1564, 1575, 2394, 2464, 3003, 3692
BstDSI	CCRYGG	1 cut(s)	1878
BstEII	GGTNACC	1 cut(s)	3184
BstFNI	CGCG	2 cut(s)	1705, 3475
BstH2I	RGCGCY	1 cut(s)	2158
BstHHI	GCGC	6 cut(s)	1600, 2157, 2247, 2424, 3475, 3696
BstNI	CCWGG	6 cut(s)	2094, 2110, 2598, 2774, 3182, 3380
BstNSI	RCATGY	2 cut(s)	2212, 2362
BstPI	GGTNACC	1 cut(s)	3184
BstSCI	CCNGG	6 cut(s)	2092, 2108, 2596, 2772, 3180, 3378
BstSFI	CTRYAG	3 cut(s)	585, 822, 1341
BstSLI	GKGCMC	3 cut(s)	2271, 2333, 2629
BstUI	CGCG	2 cut(s)	1705, 3475
BstV2I	GAAGAC	4 cut(s)	962, 1358, 2141, 3420
BstX2I	RGATCY	6 cut(s)	847, 964, 1317, 1337, 2044, 3586
BstXI	CCANNNNNNTGG	2 cut(s)	503, 2554
BstYI	RGATCY	6 cut(s)	847, 964, 1317, 1337, 2044, 3586
Bsu36I	CCTNAGG	2 cut(s)	2325, 2688
BsuI	GTATCC	1 cut(s)	1036
BsuRI	GGCC	7 cut(s)	1566, 1842, 2269, 2331, 2771, 3180, 3735
BtgI	CCRYGG	1 cut(s)	1878
BtgZI	GCGATG	1 cut(s)	405
BtsIMutI	CAGTG	7 cut(s)	450, 1021, 1053, 1203, 2007, 2233, 3068
BveI	ACCTGC	1 cut(s)	1603
Cac8I	GCNNGC	7 cut(s)	412, 1564, 1575, 2394, 2464, 3003, 3692
CaiI	CAGNNNCTG	2 cut(s)	452, 2969
CciI	TCATGA	2 cut(s)	2427, 3103
CfoI	GCGC	6 cut(s)	1600, 2157, 2247, 2424, 3475, 3696
Cfr10I	RCCGGY	2 cut(s)	23, 3039
Cfr13I	GGNCC	9 cut(s)	1609, 1666, 1840, 2116, 2267, 2268, 2329, 2330, 2770
CseI	GACGC	4 cut(s)	157, 240, 1711, 3212
Csp6I	GTAC	7 cut(s)	1632, 1798, 1929, 2055, 2075, 2827, 2972
CspAI	ACCGGT	1 cut(s)	3039
CspCI	CAANNNNNGTGG	2 cut(s)	2444, 2479
CviQI	GTAC	7 cut(s)	1632, 1798, 1929, 2055, 2075, 2827, 2972
DraI	TTTAAA	2 cut(s)	610, 630
DrdI	GACNNNNNNGTC	3 cut(s)	1690, 2363, 3209
DseDI	GACNNNNNNGTC	3 cut(s)	1690, 2363, 3209
EaeI	YGGCCR	1 cut(s)	3178
Eam1104I	CTCTTC	1 cut(s)	1419
EarI	CTCTTC	1 cut(s)	1419
EciI	GGCGGA	3 cut(s)	429, 1898, 2893
Eco130I	CCWWGG	6 cut(s)	1567, 1601, 1878, 2766, 3189, 3556
Eco24I	GRGCYC	4 cut(s)	780, 2271, 2333, 3564
Eco31I	GGTCTC	1 cut(s)	3368
Eco47I	GGWCC	3 cut(s)	1609, 1666, 2116
Eco81I	CCTNAGG	2 cut(s)	2325, 2688
Eco88I	CYCGRG	3 cut(s)	593, 779, 1620
Eco91I	GGTNACC	1 cut(s)	3184
EcoO109I	RGGNCCY	3 cut(s)	1666, 2268, 2329
EcoO65I	GGTNACC	1 cut(s)	3184
EcoRI	GAATTC	1 cut(s)	925
EcoRII	CCWGG	6 cut(s)	2092, 2108, 2596, 2772, 3180, 3378
EcoT14I	CCWWGG	6 cut(s)	1567, 1601, 1878, 2766, 3189, 3556
EcoT22I	ATGCAT	1 cut(s)	2572
EcoT38I	GRGCYC	4 cut(s)	780, 2271, 2333, 3564
ErhI	CCWWGG	6 cut(s)	1567, 1601, 1878, 2766, 3189, 3556
Esp3I	CGTCTC	3 cut(s)	140, 258, 1694
FalI	AAGNNNNNCTT	4 cut(s)	1431, 1463, 3149, 3181
FaqI	GGGAC	2 cut(s)	1527, 2041
FriOI	GRGCYC	4 cut(s)	780, 2271, 2333, 3564
FspBI	CTAG	6 cut(s)	270, 968, 1602, 2349, 2622, 3047
FspI	TGCGCA	1 cut(s)	2246
GlaI	GCGC	6 cut(s)	1599, 2156, 2246, 2423, 3474, 3695
GsaI	CCCAGC	3 cut(s)	1214, 2415, 2484
GsuI	CTGGAG	2 cut(s)	185, 2160
HaeII	RGCGCY	1 cut(s)	2158
HaeIII	GGCC	7 cut(s)	1566, 1842, 2269, 2331, 2771, 3180, 3735
HapII	CCGG	2 cut(s)	24, 3040
HgaI	GACGC	4 cut(s)	157, 240, 1711, 3212
HhaI	GCGC	6 cut(s)	1600, 2157, 2247, 2424, 3475, 3696
Hin1I	GRCGYC	2 cut(s)	251, 3204
Hin6I	GCGC	6 cut(s)	1598, 2155, 2245, 2422, 3473, 3694
HinP1I	GCGC	6 cut(s)	1598, 2155, 2245, 2422, 3473, 3694
HindIII	AAGCTT	2 cut(s)	998, 1712
HpaII	CCGG	2 cut(s)	24, 3040
HphI	GGTGA	9 cut(s)	23, 221, 688, 746, 1073, 2714, 3023, 3395, 3491
Hpy166II	GTNNAC	3 cut(s)	1477, 2594, 3762
Hpy8I	GTNNAC	3 cut(s)	1477, 2594, 3762
HpyCH4IV	ACGT	4 cut(s)	669, 1304, 1741, 2758
HpySE526I	ACGT	4 cut(s)	669, 1304, 1741, 2758
Hsp92I	GRCGYC	2 cut(s)	251, 3204
HspAI	GCGC	6 cut(s)	1598, 2155, 2245, 2422, 3473, 3694
LguI	GCTCTTC	1 cut(s)	1419
LmnI	GCTCC	6 cut(s)	166, 660, 775, 1396, 2323, 2692
MaeI	CTAG	6 cut(s)	270, 968, 1602, 2349, 2622, 3047
MaeII	ACGT	4 cut(s)	669, 1304, 1741, 2758
MfeI	CAATTG	3 cut(s)	294, 2289, 3443
MflI	RGATCY	6 cut(s)	847, 964, 1317, 1337, 2044, 3586
MhlI	GDGCHC	5 cut(s)	780, 2271, 2333, 2629, 3564
MlsI	TGGCCA	1 cut(s)	3180
MluI	ACGCGT	1 cut(s)	1703
MluNI	TGGCCA	1 cut(s)	3180
MmeI	TCCRAC	6 cut(s)	382, 2094, 2184, 3081, 3268, 3607
Mox20I	TGGCCA	1 cut(s)	3180
Mph1103I	ATGCAT	1 cut(s)	2572
MroXI	GAANNNNTTC	3 cut(s)	1446, 1713, 3714
MscI	TGGCCA	1 cut(s)	3180
MseI	TTAA	7 cut(s)	609, 629, 876, 1674, 2070, 3150, 3698
MslI	CAYNNNNRTG	2 cut(s)	1415, 1472
Msp20I	TGGCCA	1 cut(s)	3180
MspA1I	CMGCKG	5 cut(s)	1346, 1562, 1822, 2411, 2903
MspI	CCGG	2 cut(s)	24, 3040
MspR9I	CCNGG	6 cut(s)	2094, 2110, 2598, 2774, 3182, 3380
MunI	CAATTG	3 cut(s)	294, 2289, 3443
MvaI	CCWGG	6 cut(s)	2094, 2110, 2598, 2774, 3182, 3380
MvnI	CGCG	2 cut(s)	1705, 3475
NcoI	CCATGG	1 cut(s)	1878
NmuCI	GTSAC	5 cut(s)	448, 1465, 2365, 2702, 3317
NsbI	TGCGCA	1 cut(s)	2246
NsiI	ATGCAT	1 cut(s)	2572
NspI	RCATGY	2 cut(s)	2212, 2362
OliI	CACNNNNGTG	1 cut(s)	1472
PaeR7I	CTCGAG	2 cut(s)	593, 1620
PagI	TCATGA	2 cut(s)	2427, 3103
PciI	ACATGT	1 cut(s)	2358
PciSI	GCTCTTC	1 cut(s)	1419
PdmI	GAANNNNTTC	3 cut(s)	1446, 1713, 3714
PflMI	CCANNNNNTGG	2 cut(s)	3063, 3535
PinAI	ACCGGT	1 cut(s)	3039
PpuMI	RGGWCCY	1 cut(s)	1666
PscI	ACATGT	1 cut(s)	2358
Psp5II	RGGWCCY	1 cut(s)	1666
Psp6I	CCWGG	6 cut(s)	2092, 2108, 2596, 2772, 3180, 3378
PspEI	GGTNACC	1 cut(s)	3184
PspFI	CCCAGC	3 cut(s)	1210, 2411, 2480
PspGI	CCWGG	6 cut(s)	2092, 2108, 2596, 2772, 3180, 3378
PspOMI	GGGCCC	2 cut(s)	2267, 2329
PspPI	GGNCC	9 cut(s)	1609, 1666, 1840, 2116, 2267, 2268, 2329, 2330, 2770
PspPPI	RGGWCCY	1 cut(s)	1666
PspXI	VCTCGAGB	1 cut(s)	1620
PsrI	GAACNNNNNNTAC	2 cut(s)	3063, 3095
PstI	CTGCAG	1 cut(s)	1345
PstNI	CAGNNNCTG	2 cut(s)	452, 2969
PsuI	RGATCY	6 cut(s)	847, 964, 1317, 1337, 2044, 3586
PvuII	CAGCTG	5 cut(s)	1346, 1562, 1822, 2411, 2903
RsaI	GTAC	7 cut(s)	1633, 1799, 1930, 2056, 2076, 2828, 2973
RsaNI	GTAC	7 cut(s)	1632, 1798, 1929, 2055, 2075, 2827, 2972
RseI	CAYNNNNRTG	2 cut(s)	1415, 1472
SapI	GCTCTTC	1 cut(s)	1419
SaqAI	TTAA	7 cut(s)	609, 629, 876, 1674, 2070, 3150, 3698
Sau96I	GGNCC	9 cut(s)	1609, 1666, 1840, 2116, 2267, 2268, 2329, 2330, 2770
ScrFI	CCNGG	6 cut(s)	2094, 2110, 2598, 2774, 3182, 3380
SduI	GDGCHC	5 cut(s)	780, 2271, 2333, 2629, 3564
SfcI	CTRYAG	3 cut(s)	585, 822, 1341
Sfr274I	CTCGAG	2 cut(s)	593, 1620
SinI	GGWCC	3 cut(s)	1609, 1666, 2116
SlaI	CTCGAG	2 cut(s)	593, 1620
SmiI	ATTTAAAT	1 cut(s)	630
SmiMI	CAYNNNNRTG	2 cut(s)	1415, 1472
SmlI	CTYRAG	7 cut(s)	104, 593, 861, 931, 1620, 1892, 3322
SmoI	CTYRAG	7 cut(s)	104, 593, 861, 931, 1620, 1892, 3322
SsiI	CCGC	8 cut(s)	116, 414, 641, 707, 1769, 1883, 2875, 2878
SspI	AATATT	1 cut(s)	373
SspMI	CTAG	6 cut(s)	270, 968, 1602, 2349, 2622, 3047
StyD4I	CCNGG	6 cut(s)	2092, 2108, 2596, 2772, 3180, 3378
StyI	CCWWGG	6 cut(s)	1567, 1601, 1878, 2766, 3189, 3556
SwaI	ATTTAAAT	1 cut(s)	630
TaiI	ACGT	4 cut(s)	672, 1307, 1744, 2761
TaqI	TCGA	8 cut(s)	132, 276, 594, 1375, 1402, 1621, 2617, 2934
TatI	WGTACW	2 cut(s)	1797, 2826
TauI	GCSGC	1 cut(s)	2878
Tru1I	TTAA	7 cut(s)	609, 629, 876, 1674, 2070, 3150, 3698
Tru9I	TTAA	7 cut(s)	609, 629, 876, 1674, 2070, 3150, 3698
TscAI	CASTG	7 cut(s)	457, 1021, 1053, 1210, 2014, 2233, 3068
TseFI	GTSAC	5 cut(s)	448, 1465, 2365, 2702, 3317
Tsp45I	GTSAC	5 cut(s)	448, 1465, 2365, 2702, 3317
TspRI	CASTG	7 cut(s)	457, 1021, 1053, 1210, 2014, 2233, 3068
Van91I	CCANNNNNTGG	2 cut(s)	3063, 3535
VpaK11BI	GGWCC	3 cut(s)	1609, 1666, 2116
XapI	RAATTY	6 cut(s)	157, 872, 925, 1733, 2732, 3419
XbaI	TCTAGA	1 cut(s)	3046
XceI	RCATGY	2 cut(s)	2212, 2362
XcmI	CCANNNNNNNNNTGG	3 cut(s)	2773, 2989, 3214
XhoI	CTCGAG	2 cut(s)	593, 1620
XmaJI	CCTAGG	1 cut(s)	1601
XmnI	GAANNNNTTC	3 cut(s)	1446, 1713, 3714
XspI	CTAG	6 cut(s)	270, 968, 1602, 2349, 2622, 3047
Zsp2I	ATGCAT	1 cut(s)	2572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.