Ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G20130 AT4G20130 AT4G20130 |
| fragaria_vesca | FvH4_3g13130 FvH4_3g13130 FvH4_3g13130 FvH4_3g13130 FvH4_3g13130 |
| malus_domestica | MD10G1226200.v1.1 |
| prunus_persica | Prupe.4G119100_v2.0.a1 Prupe.4G119100_v2.0.a1 |
| pyrus_communis | pycom10g19010 |
| rosa_chinensis | RchiOBHm_Chr5g0021381 |
| rosa_laevigata | RLG00000032608 |
| rosa_multiflora | Rmu_sc0004847.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00057160 |
| rosa_rugosa | Rorug05G0066700 Rorug05G0066800 |
| rosa_samantha | Rh5CG169100 |
| rosa_wichuraiana | Rw5G013880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 1068, 1534 |
| AccI | GTMKAC | 1 cut(s) | 1231 |
| AccII | CGCG | 1 cut(s) | 23 |
| AccIII | TCCGGA | 1 cut(s) | 1196 |
| AciI | CCGC | 4 cut(s) | 23, 314, 1068, 1534 |
| AclI | AACGTT | 1 cut(s) | 72 |
| AclWI | GGATC | 6 cut(s) | 554, 585, 713, 726, 999, 1318 |
| AcsI | RAATTY | 3 cut(s) | 371, 453, 767 |
| AcvI | CACGTG | 1 cut(s) | 1299 |
| AfaI | GTAC | 6 cut(s) | 15, 519, 605, 641, 798, 1214 |
| AfeI | AGCGCT | 1 cut(s) | 661 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 763, 1145, 1333 |
| AflIII | ACRYGT | 1 cut(s) | 1083 |
| AgsI | TTSAA | 6 cut(s) | 221, 908, 1004, 1189, 1431, 1457 |
| AjnI | CCWGG | 1 cut(s) | 762 |
| AleI | CACNNNNGTG | 1 cut(s) | 792 |
| AluBI | AGCT | 4 cut(s) | 180, 490, 703, 1460 |
| AluI | AGCT | 4 cut(s) | 180, 490, 703, 1460 |
| Alw21I | GWGCWC | 1 cut(s) | 901 |
| Alw26I | GTCTC | 2 cut(s) | 47, 560 |
| Alw44I | GTGCAC | 1 cut(s) | 897 |
| AlwI | GGATC | 6 cut(s) | 554, 585, 713, 726, 999, 1318 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 130, 1516 |
| Aor13HI | TCCGGA | 1 cut(s) | 1196 |
| Aor51HI | AGCGCT | 1 cut(s) | 661 |
| AoxI | GGCC | 1 cut(s) | 383 |
| ApaLI | GTGCAC | 1 cut(s) | 897 |
| ApeKI | GCWGC | 8 cut(s) | 108, 130, 239, 490, 1277, 1280, 1385, 1460 |
| ApoI | RAATTY | 3 cut(s) | 371, 453, 767 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 426, 1490 |
| AspLEI | GCGC | 2 cut(s) | 23, 662 |
| AspS9I | GGNCC | 2 cut(s) | 316, 383 |
| AsuC2I | CCSGG | 2 cut(s) | 81, 434 |
| AsuHPI | GGTGA | 2 cut(s) | 656, 1052 |
| AsuNHI | GCTAGC | 1 cut(s) | 1442 |
| AvaII | GGWCC | 1 cut(s) | 316 |
| BaeGI | GKGCMC | 2 cut(s) | 674, 901 |
| BamHI | GGATCC | 1 cut(s) | 718 |
| BanII | GRGCYC | 2 cut(s) | 763, 850 |
| BauI | CACGAG | 1 cut(s) | 822 |
| BbrPI | CACGTG | 1 cut(s) | 1299 |
| Bbv12I | GWGCWC | 1 cut(s) | 901 |
| BbvI | GCAGC | 8 cut(s) | 95, 117, 251, 477, 1289, 1292, 1397, 1447 |
| BccI | CCATC | 5 cut(s) | 233, 383, 1061, 1238, 1301 |
| BciT130I | CCWGG | 1 cut(s) | 764 |
| BciVI | GTATCC | 1 cut(s) | 1530 |
| BcnI | CCSGG | 2 cut(s) | 81, 434 |
| BcoDI | GTCTC | 2 cut(s) | 47, 560 |
| BfaI | CTAG | 5 cut(s) | 438, 461, 690, 1424, 1443 |
| BfmI | CTRYAG | 2 cut(s) | 141, 713 |
| BfoI | RGCGCY | 1 cut(s) | 663 |
| BfuI | GTATCC | 1 cut(s) | 1530 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 248 |
| BisI | GCNGC | 8 cut(s) | 109, 131, 240, 491, 1278, 1281, 1386, 1461 |
| BlsI | GCNGC | 8 cut(s) | 110, 132, 241, 492, 1279, 1282, 1387, 1462 |
| BmcAI | AGTACT | 1 cut(s) | 1214 |
| Bme1390I | CCNGG | 3 cut(s) | 81, 434, 764 |
| Bme18I | GGWCC | 1 cut(s) | 316 |
| BmgT120I | GGNCC | 2 cut(s) | 316, 383 |
| BmiI | GGNNCC | 6 cut(s) | 148, 252, 309, 318, 423, 720 |
| BmrFI | CCNGG | 3 cut(s) | 81, 434, 764 |
| BmrI | ACTGGG | 1 cut(s) | 118 |
| BmsI | GCATC | 4 cut(s) | 149, 860, 901, 1080 |
| BmtI | GCTAGC | 1 cut(s) | 1446 |
| BmuI | ACTGGG | 1 cut(s) | 118 |
| BpuMI | CCSGG | 2 cut(s) | 81, 434 |
| BsaAI | YACGTR | 2 cut(s) | 1157, 1299 |
| BsaBI | GATNNNNATC | 3 cut(s) | 576, 723, 1052 |
| BsaJI | CCNNGG | 5 cut(s) | 243, 411, 494, 762, 1124 |
| BsaWI | WCCGGW | 2 cut(s) | 1196, 1482 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 235, 265 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 763, 1145, 1333 |
| Bse1I | ACTGG | 3 cut(s) | 124, 521, 1521 |
| Bse3DI | GCAATG | 1 cut(s) | 1289 |
| Bse8I | GATNNNNATC | 3 cut(s) | 576, 723, 1052 |
| BseAI | TCCGGA | 1 cut(s) | 1196 |
| BseBI | CCWGG | 1 cut(s) | 764 |
| BseDI | CCNNGG | 5 cut(s) | 243, 411, 494, 762, 1124 |
| BseGI | GGATG | 6 cut(s) | 164, 421, 504, 529, 1135, 1318 |
| BseJI | GATNNNNATC | 3 cut(s) | 576, 723, 1052 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 763, 1145, 1333 |
| BseMI | GCAATG | 1 cut(s) | 1289 |
| BseMII | CTCAG | 4 cut(s) | 291, 572, 822, 842 |
| BseNI | ACTGG | 3 cut(s) | 124, 521, 1521 |
| BseRI | GAGGAG | 4 cut(s) | 65, 243, 710, 713 |
| BseSI | GKGCMC | 2 cut(s) | 674, 901 |
| BseXI | GCAGC | 8 cut(s) | 95, 117, 251, 477, 1289, 1292, 1397, 1447 |
| BseYI | CCCAGC | 1 cut(s) | 656 |
| Bsh1236I | CGCG | 1 cut(s) | 23 |
| BshFI | GGCC | 1 cut(s) | 385 |
| BsiHKAI | GWGCWC | 1 cut(s) | 901 |
| BsiSI | CCGG | 4 cut(s) | 81, 433, 1197, 1483 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 763, 1145, 1333 |
| BsmAI | GTCTC | 2 cut(s) | 47, 560 |
| BsmI | GAATGC | 1 cut(s) | 1373 |
| BsnI | GGCC | 1 cut(s) | 385 |
| Bsp1286I | GDGCHC | 4 cut(s) | 674, 763, 850, 901 |
| Bsp13I | TCCGGA | 1 cut(s) | 1196 |
| Bsp143I | GATC | 7 cut(s) | 559, 577, 718, 991, 1269, 1323, 1411 |
| Bsp19I | CCATGG | 1 cut(s) | 494 |
| BspACI | CCGC | 4 cut(s) | 23, 314, 1068, 1534 |
| BspANI | GGCC | 1 cut(s) | 385 |
| BspCNI | CTCAG | 4 cut(s) | 292, 573, 823, 843 |
| BspEI | TCCGGA | 1 cut(s) | 1196 |
| BspFNI | CGCG | 1 cut(s) | 23 |
| BspLI | GGNNCC | 6 cut(s) | 148, 252, 309, 318, 423, 720 |
| BspMAI | CTGCAG | 1 cut(s) | 717 |
| BspOI | GCTAGC | 1 cut(s) | 1446 |
| BspPI | GGATC | 6 cut(s) | 554, 585, 713, 726, 999, 1318 |
| BsrBI | CCGCTC | 2 cut(s) | 1068, 1534 |
| BsrDI | GCAATG | 1 cut(s) | 1289 |
| BsrI | ACTGG | 3 cut(s) | 124, 521, 1521 |
| BssECI | CCNNGG | 5 cut(s) | 243, 411, 494, 762, 1124 |
| BssMI | GATC | 7 cut(s) | 559, 577, 718, 991, 1269, 1323, 1411 |
| BssSI | CACGAG | 1 cut(s) | 822 |
| BssT1I | CCWWGG | 3 cut(s) | 411, 494, 1124 |
| Bst2BI | CACGAG | 1 cut(s) | 822 |
| Bst2UI | CCWGG | 1 cut(s) | 764 |
| Bst4CI | ACNGT | 4 cut(s) | 58, 478, 644, 1542 |
| Bst6I | CTCTTC | 1 cut(s) | 1114 |
| BstBAI | YACGTR | 2 cut(s) | 1157, 1299 |
| BstC8I | GCNNGC | 6 cut(s) | 312, 592, 881, 998, 1444, 1512 |
| BstDEI | CTNAG | 5 cut(s) | 300, 581, 831, 851, 1404 |
| BstDSI | CCRYGG | 2 cut(s) | 243, 494 |
| BstF5I | GGATG | 6 cut(s) | 164, 421, 504, 529, 1135, 1318 |
| BstFNI | CGCG | 1 cut(s) | 23 |
| BstH2I | RGCGCY | 1 cut(s) | 663 |
| BstHHI | GCGC | 2 cut(s) | 23, 662 |
| BstKTI | GATC | 7 cut(s) | 562, 580, 721, 994, 1272, 1326, 1414 |
| BstMAI | GTCTC | 2 cut(s) | 47, 560 |
| BstMBI | GATC | 7 cut(s) | 559, 577, 718, 991, 1269, 1323, 1411 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 239, 248, 1274 |
| BstNI | CCWGG | 1 cut(s) | 764 |
| BstNSI | RCATGY | 5 cut(s) | 594, 883, 943, 1000, 1087 |
| BstSCI | CCNGG | 3 cut(s) | 79, 432, 762 |
| BstSFI | CTRYAG | 2 cut(s) | 141, 713 |
| BstSLI | GKGCMC | 2 cut(s) | 674, 901 |
| BstUI | CGCG | 1 cut(s) | 23 |
| BstV1I | GCAGC | 8 cut(s) | 95, 117, 251, 477, 1289, 1292, 1397, 1447 |
| BstX2I | RGATCY | 3 cut(s) | 559, 577, 718 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 418 |
| BstYI | RGATCY | 3 cut(s) | 559, 577, 718 |
| BsuI | GTATCC | 1 cut(s) | 1530 |
| BsuRI | GGCC | 1 cut(s) | 385 |
| BtgI | CCRYGG | 2 cut(s) | 243, 494 |
| BtsCI | GGATG | 6 cut(s) | 164, 421, 504, 529, 1135, 1318 |
| BtsIMutI | CAGTG | 2 cut(s) | 528, 1514 |
| Cac8I | GCNNGC | 6 cut(s) | 312, 592, 881, 998, 1444, 1512 |
| CaiI | CAGNNNCTG | 2 cut(s) | 130, 1516 |
| CfoI | GCGC | 2 cut(s) | 23, 662 |
| Cfr13I | GGNCC | 2 cut(s) | 316, 383 |
| CseI | GACGC | 1 cut(s) | 1459 |
| Csp6I | GTAC | 6 cut(s) | 14, 518, 604, 640, 797, 1213 |
| CviAII | CATG | 8 cut(s) | 495, 591, 880, 940, 997, 1063, 1084, 1507 |
| CviQI | GTAC | 6 cut(s) | 14, 518, 604, 640, 797, 1213 |
| DdeI | CTNAG | 5 cut(s) | 300, 581, 831, 851, 1404 |
| DpnI | GATC | 7 cut(s) | 561, 579, 720, 993, 1271, 1325, 1413 |
| DpnII | GATC | 7 cut(s) | 559, 577, 718, 991, 1269, 1323, 1411 |
| DraI | TTTAAA | 1 cut(s) | 376 |
| Eam1104I | CTCTTC | 1 cut(s) | 1114 |
| EarI | CTCTTC | 1 cut(s) | 1114 |
| Eco130I | CCWWGG | 3 cut(s) | 411, 494, 1124 |
| Eco24I | GRGCYC | 2 cut(s) | 763, 850 |
| Eco32I | GATATC | 1 cut(s) | 544 |
| Eco47I | GGWCC | 1 cut(s) | 316 |
| Eco47III | AGCGCT | 1 cut(s) | 661 |
| Eco72I | CACGTG | 1 cut(s) | 1299 |
| EcoRII | CCWGG | 1 cut(s) | 762 |
| EcoRV | GATATC | 1 cut(s) | 544 |
| EcoT14I | CCWWGG | 3 cut(s) | 411, 494, 1124 |
| EcoT22I | ATGCAT | 1 cut(s) | 875 |
| EcoT38I | GRGCYC | 2 cut(s) | 763, 850 |
| ErhI | CCWWGG | 3 cut(s) | 411, 494, 1124 |
| FaeI | CATG | 8 cut(s) | 498, 594, 883, 943, 1000, 1066, 1087, 1510 |
| FatI | CATG | 8 cut(s) | 494, 590, 879, 939, 996, 1062, 1083, 1506 |
| FauNDI | CATATG | 1 cut(s) | 361 |
| FblI | GTMKAC | 1 cut(s) | 1231 |
| Fnu4HI | GCNGC | 8 cut(s) | 109, 131, 240, 491, 1278, 1281, 1386, 1461 |
| FokI | GGATG | 6 cut(s) | 171, 428, 511, 516, 1142, 1325 |
| FriOI | GRGCYC | 2 cut(s) | 763, 850 |
| Fsp4HI | GCNGC | 8 cut(s) | 109, 131, 240, 491, 1278, 1281, 1386, 1461 |
| FspBI | CTAG | 5 cut(s) | 438, 461, 690, 1424, 1443 |
| GlaI | GCGC | 2 cut(s) | 22, 661 |
| GluI | GCNGC | 8 cut(s) | 109, 131, 240, 491, 1278, 1281, 1386, 1461 |
| GsaI | CCCAGC | 1 cut(s) | 660 |
| HaeII | RGCGCY | 1 cut(s) | 663 |
| HaeIII | GGCC | 1 cut(s) | 385 |
| HapII | CCGG | 4 cut(s) | 81, 433, 1197, 1483 |
| HgaI | GACGC | 1 cut(s) | 1459 |
| HhaI | GCGC | 2 cut(s) | 23, 662 |
| Hin1II | CATG | 8 cut(s) | 498, 594, 883, 943, 1000, 1066, 1087, 1510 |
| Hin6I | GCGC | 2 cut(s) | 21, 660 |
| HinP1I | GCGC | 2 cut(s) | 21, 660 |
| HincII | GTYRAC | 3 cut(s) | 474, 1232, 1261 |
| HindII | GTYRAC | 3 cut(s) | 474, 1232, 1261 |
| HpaI | GTTAAC | 1 cut(s) | 474 |
| HpaII | CCGG | 4 cut(s) | 81, 433, 1197, 1483 |
| HphI | GGTGA | 2 cut(s) | 656, 1052 |
| Hpy166II | GTNNAC | 5 cut(s) | 474, 797, 899, 1232, 1261 |
| Hpy188I | TCNGA | 8 cut(s) | 301, 582, 709, 832, 852, 1306, 1323, 1547 |
| Hpy188III | TCNNGA | 7 cut(s) | 461, 509, 563, 824, 908, 1146, 1197 |
| Hpy8I | GTNNAC | 5 cut(s) | 474, 797, 899, 1232, 1261 |
| HpyAV | CCTTC | 6 cut(s) | 124, 374, 605, 1183, 1345, 1495 |
| HpyCH4III | ACNGT | 4 cut(s) | 58, 478, 644, 1542 |
| HpyCH4IV | ACGT | 3 cut(s) | 72, 1156, 1298 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 239, 248, 1274 |
| HpyF3I | CTNAG | 5 cut(s) | 300, 581, 831, 851, 1404 |
| HpySE526I | ACGT | 3 cut(s) | 72, 1156, 1298 |
| Hsp92II | CATG | 8 cut(s) | 498, 594, 883, 943, 1000, 1066, 1087, 1510 |
| HspAI | GCGC | 2 cut(s) | 21, 660 |
| Kpn2I | TCCGGA | 1 cut(s) | 1196 |
| KspAI | GTTAAC | 1 cut(s) | 474 |
| Kzo9I | GATC | 7 cut(s) | 559, 577, 718, 991, 1269, 1323, 1411 |
| LmnI | GCTCC | 6 cut(s) | 116, 167, 256, 307, 700, 1265 |
| Lsp1109I | GCAGC | 8 cut(s) | 95, 117, 251, 477, 1289, 1292, 1397, 1447 |
| LweI | GCATC | 4 cut(s) | 149, 860, 901, 1080 |
| MaeI | CTAG | 5 cut(s) | 438, 461, 690, 1424, 1443 |
| MaeII | ACGT | 3 cut(s) | 72, 1156, 1298 |
| MaeIII | GTNAC | 1 cut(s) | 1040 |
| MalI | GATC | 7 cut(s) | 561, 579, 720, 993, 1271, 1325, 1413 |
| MbiI | CCGCTC | 2 cut(s) | 1068, 1534 |
| MboI | GATC | 7 cut(s) | 559, 577, 718, 991, 1269, 1323, 1411 |
| MboII | GAAGA | 3 cut(s) | 632, 1101, 1376 |
| MflI | RGATCY | 3 cut(s) | 559, 577, 718 |
| MhlI | GDGCHC | 4 cut(s) | 674, 763, 850, 901 |
| MlyI | GAGTC | 2 cut(s) | 78, 284 |
| MmeI | TCCRAC | 2 cut(s) | 174, 285 |
| Mph1103I | ATGCAT | 1 cut(s) | 875 |
| MroI | TCCGGA | 1 cut(s) | 1196 |
| MroXI | GAANNNNTTC | 2 cut(s) | 426, 1490 |
| MseI | TTAA | 7 cut(s) | 27, 375, 473, 549, 810, 987, 1032 |
| MslI | CAYNNNNRTG | 4 cut(s) | 792, 878, 884, 1088 |
| MspA1I | CMGCKG | 1 cut(s) | 314 |
| MspI | CCGG | 4 cut(s) | 81, 433, 1197, 1483 |
| MspR9I | CCNGG | 3 cut(s) | 81, 434, 764 |
| Mva1269I | GAATGC | 1 cut(s) | 1373 |
| MvaI | CCWGG | 1 cut(s) | 764 |
| MvnI | CGCG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 239, 248, 1274 |
| NciI | CCSGG | 2 cut(s) | 81, 434 |
| NcoI | CCATGG | 1 cut(s) | 494 |
| NdeI | CATATG | 1 cut(s) | 361 |
| NdeII | GATC | 7 cut(s) | 559, 577, 718, 991, 1269, 1323, 1411 |
| NheI | GCTAGC | 1 cut(s) | 1442 |
| NlaIII | CATG | 8 cut(s) | 498, 594, 883, 943, 1000, 1066, 1087, 1510 |
| NlaIV | GGNNCC | 6 cut(s) | 148, 252, 309, 318, 423, 720 |
| NmeAIII | GCCGAG | 1 cut(s) | 782 |
| NmuCI | GTSAC | 1 cut(s) | 1040 |
| NsiI | ATGCAT | 1 cut(s) | 875 |
| NspI | RCATGY | 5 cut(s) | 594, 883, 943, 1000, 1087 |
| OliI | CACNNNNGTG | 1 cut(s) | 792 |
| PaeI | GCATGC | 3 cut(s) | 594, 883, 1000 |
| PciI | ACATGT | 1 cut(s) | 1083 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 820 |
| PctI | GAATGC | 1 cut(s) | 1373 |
| PdmI | GAANNNNTTC | 2 cut(s) | 426, 1490 |
| PfeI | GAWTC | 8 cut(s) | 366, 827, 837, 1104, 1120, 1135, 1169, 1427 |
| PkrI | GCNGC | 8 cut(s) | 110, 132, 241, 492, 1279, 1282, 1387, 1462 |
| PleI | GAGTC | 2 cut(s) | 78, 284 |
| PmaCI | CACGTG | 1 cut(s) | 1299 |
| PmlI | CACGTG | 1 cut(s) | 1299 |
| PpsI | GAGTC | 2 cut(s) | 78, 284 |
| Ppu21I | YACGTR | 2 cut(s) | 1157, 1299 |
| PscI | ACATGT | 1 cut(s) | 1083 |
| Psp1406I | AACGTT | 1 cut(s) | 72 |
| Psp6I | CCWGG | 1 cut(s) | 762 |
| PspCI | CACGTG | 1 cut(s) | 1299 |
| PspFI | CCCAGC | 1 cut(s) | 656 |
| PspGI | CCWGG | 1 cut(s) | 762 |
| PspN4I | GGNNCC | 6 cut(s) | 148, 252, 309, 318, 423, 720 |
| PspPI | GGNCC | 2 cut(s) | 316, 383 |
| PstI | CTGCAG | 1 cut(s) | 717 |
| PstNI | CAGNNNCTG | 2 cut(s) | 130, 1516 |
| PsuI | RGATCY | 3 cut(s) | 559, 577, 718 |
| RsaI | GTAC | 6 cut(s) | 15, 519, 605, 641, 798, 1214 |
| RsaNI | GTAC | 6 cut(s) | 14, 518, 604, 640, 797, 1213 |
| RseI | CAYNNNNRTG | 4 cut(s) | 792, 878, 884, 1088 |
| SalI | GTCGAC | 1 cut(s) | 1230 |
| SaqAI | TTAA | 7 cut(s) | 27, 375, 473, 549, 810, 987, 1032 |
| SatI | GCNGC | 8 cut(s) | 109, 131, 240, 491, 1278, 1281, 1386, 1461 |
| Sau3AI | GATC | 7 cut(s) | 559, 577, 718, 991, 1269, 1323, 1411 |
| Sau96I | GGNCC | 2 cut(s) | 316, 383 |
| ScaI | AGTACT | 1 cut(s) | 1214 |
| SchI | GAGTC | 2 cut(s) | 78, 284 |
| ScrFI | CCNGG | 3 cut(s) | 81, 434, 764 |
| SduI | GDGCHC | 4 cut(s) | 674, 763, 850, 901 |
| SfaNI | GCATC | 4 cut(s) | 149, 860, 901, 1080 |
| SfcI | CTRYAG | 2 cut(s) | 141, 713 |
| SinI | GGWCC | 1 cut(s) | 316 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 792, 878, 884, 1088 |
| SphI | GCATGC | 3 cut(s) | 594, 883, 1000 |
| SsiI | CCGC | 4 cut(s) | 23, 314, 1068, 1534 |
| SspI | AATATT | 1 cut(s) | 537 |
| SspMI | CTAG | 5 cut(s) | 438, 461, 690, 1424, 1443 |
| StyD4I | CCNGG | 3 cut(s) | 79, 432, 762 |
| StyI | CCWWGG | 3 cut(s) | 411, 494, 1124 |
| TaaI | ACNGT | 4 cut(s) | 58, 478, 644, 1542 |
| TaiI | ACGT | 3 cut(s) | 75, 1159, 1301 |
| TaqI | TCGA | 3 cut(s) | 369, 734, 1231 |
| TatI | WGTACW | 1 cut(s) | 1212 |
| TfiI | GAWTC | 8 cut(s) | 366, 827, 837, 1104, 1120, 1135, 1169, 1427 |
| Tru1I | TTAA | 7 cut(s) | 27, 375, 473, 549, 810, 987, 1032 |
| Tru9I | TTAA | 7 cut(s) | 27, 375, 473, 549, 810, 987, 1032 |
| TscAI | CASTG | 2 cut(s) | 528, 1521 |
| TseFI | GTSAC | 1 cut(s) | 1040 |
| TseI | GCWGC | 8 cut(s) | 108, 130, 239, 490, 1277, 1280, 1385, 1460 |
| Tsp45I | GTSAC | 1 cut(s) | 1040 |
| TspDTI | ATGAA | 3 cut(s) | 829, 965, 1151 |
| TspGWI | ACGGA | 6 cut(s) | 260, 1042, 1128, 1221, 1278, 1336 |
| TspRI | CASTG | 2 cut(s) | 528, 1521 |
| VneI | GTGCAC | 1 cut(s) | 897 |
| VpaK11BI | GGWCC | 1 cut(s) | 316 |
| XapI | RAATTY | 3 cut(s) | 371, 453, 767 |
| XbaI | TCTAGA | 1 cut(s) | 460 |
| XceI | RCATGY | 5 cut(s) | 594, 883, 943, 1000, 1087 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 570, 682 |
| XmiI | GTMKAC | 1 cut(s) | 1231 |
| XmnI | GAANNNNTTC | 2 cut(s) | 426, 1490 |
| XspI | CTAG | 5 cut(s) | 438, 461, 690, 1424, 1443 |
| ZrmI | AGTACT | 1 cut(s) | 1214 |
| Zsp2I | ATGCAT | 1 cut(s) | 875 |