Cysteine-rich receptor-like protein kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g02832 |
| malus_domestica | MD00G1101500.v1.1 MD10G1312400.v1.1 |
| prunus_persica | Prupe.4G028400_v2.0.a1 |
| pyrus_communis | pycom10g26370 |
| rosa_chinensis | RchiOBHm_Chr5g0004281 |
| rosa_laevigata | RLG00000031218 |
| rosa_multiflora | Rmu_co8460447.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00071390 |
| rosa_rugosa | Rorug04G0411100 |
| rosa_samantha | Rh5BG037900 Rh5CG041600 Rh5DG037200 |
| rosa_wichuraiana | Rw5G003510 Rw5G003710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1187 |
| Acc36I | ACCTGC | 1 cut(s) | 448 |
| AccB1I | GGYRCC | 1 cut(s) | 803 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 963 |
| AccBSI | CCGCTC | 1 cut(s) | 999 |
| AccII | CGCG | 1 cut(s) | 897 |
| AccIII | TCCGGA | 2 cut(s) | 827, 884 |
| AciI | CCGC | 5 cut(s) | 895, 912, 997, 1033, 1253 |
| AclWI | GGATC | 2 cut(s) | 278, 475 |
| AcoI | YGGCCR | 1 cut(s) | 30 |
| AcsI | RAATTY | 2 cut(s) | 496, 1093 |
| AcuI | CTGAAG | 1 cut(s) | 136 |
| AcyI | GRCGYC | 2 cut(s) | 383, 1184 |
| AfaI | GTAC | 4 cut(s) | 113, 851, 1210, 1331 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 948, 963, 1374 |
| AgsI | TTSAA | 8 cut(s) | 176, 306, 314, 549, 670, 993, 1062, 1093 |
| AjnI | CCWGG | 1 cut(s) | 245 |
| AluBI | AGCT | 7 cut(s) | 240, 519, 810, 1024, 1086, 1121, 1317 |
| AluI | AGCT | 7 cut(s) | 240, 519, 810, 1024, 1086, 1121, 1317 |
| Alw26I | GTCTC | 2 cut(s) | 825, 1268 |
| AlwI | GGATC | 2 cut(s) | 278, 475 |
| Aor13HI | TCCGGA | 2 cut(s) | 827, 884 |
| AoxI | GGCC | 3 cut(s) | 30, 853, 1334 |
| ApeKI | GCWGC | 1 cut(s) | 914 |
| ApoI | RAATTY | 2 cut(s) | 496, 1093 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 132, 164 |
| AspS9I | GGNCC | 2 cut(s) | 229, 1334 |
| AsuC2I | CCSGG | 1 cut(s) | 1156 |
| AsuHPI | GGTGA | 3 cut(s) | 227, 884, 1336 |
| AvaII | GGWCC | 1 cut(s) | 229 |
| BaeGI | GKGCMC | 1 cut(s) | 432 |
| BalI | TGGCCA | 1 cut(s) | 32 |
| BanI | GGYRCC | 1 cut(s) | 803 |
| BbsI | GAAGAC | 1 cut(s) | 142 |
| BbvI | GCAGC | 1 cut(s) | 901 |
| BccI | CCATC | 3 cut(s) | 370, 965, 1010 |
| BceAI | ACGGC | 1 cut(s) | 868 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 896, 930 |
| BciT130I | CCWGG | 1 cut(s) | 247 |
| BciVI | GTATCC | 2 cut(s) | 403, 655 |
| BclI | TGATCA | 1 cut(s) | 625 |
| BcnI | CCSGG | 1 cut(s) | 1156 |
| BcoDI | GTCTC | 2 cut(s) | 825, 1268 |
| BfaI | CTAG | 1 cut(s) | 516 |
| BfuAI | ACCTGC | 1 cut(s) | 448 |
| BfuI | GTATCC | 2 cut(s) | 403, 655 |
| BisI | GCNGC | 2 cut(s) | 895, 915 |
| BlsI | GCNGC | 2 cut(s) | 896, 916 |
| Bme1390I | CCNGG | 2 cut(s) | 247, 1156 |
| Bme18I | GGWCC | 1 cut(s) | 229 |
| BmgT120I | GGNCC | 2 cut(s) | 229, 1334 |
| BmiI | GGNNCC | 3 cut(s) | 88, 105, 805 |
| BmrFI | CCNGG | 2 cut(s) | 247, 1156 |
| BmsI | GCATC | 3 cut(s) | 336, 912, 1191 |
| BpiI | GAAGAC | 1 cut(s) | 142 |
| BpmI | CTGGAG | 2 cut(s) | 90, 268 |
| BpuEI | CTTGAG | 1 cut(s) | 45 |
| BpuMI | CCSGG | 1 cut(s) | 1156 |
| Bsa29I | ATCGAT | 1 cut(s) | 51 |
| BsaHI | GRCGYC | 2 cut(s) | 383, 1184 |
| BsaJI | CCNNGG | 2 cut(s) | 1028, 1155 |
| BsaWI | WCCGGW | 2 cut(s) | 827, 884 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1013, 1043 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 948, 963, 1374 |
| Bse1I | ACTGG | 1 cut(s) | 1072 |
| Bse3DI | GCAATG | 1 cut(s) | 1211 |
| BseAI | TCCGGA | 2 cut(s) | 827, 884 |
| BseBI | CCWGG | 1 cut(s) | 247 |
| BseCI | ATCGAT | 1 cut(s) | 51 |
| BseDI | CCNNGG | 2 cut(s) | 1028, 1155 |
| BseGI | GGATG | 4 cut(s) | 327, 702, 824, 1165 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 948, 963, 1374 |
| BseMI | GCAATG | 1 cut(s) | 1211 |
| BseMII | CTCAG | 1 cut(s) | 147 |
| BseNI | ACTGG | 1 cut(s) | 1072 |
| BseRI | GAGGAG | 4 cut(s) | 764, 778, 1031, 1034 |
| BseSI | GKGCMC | 1 cut(s) | 432 |
| BseXI | GCAGC | 1 cut(s) | 901 |
| BsgI | GTGCAG | 1 cut(s) | 1063 |
| Bsh1236I | CGCG | 1 cut(s) | 897 |
| BshFI | GGCC | 3 cut(s) | 32, 855, 1336 |
| BshNI | GGYRCC | 1 cut(s) | 803 |
| BshVI | ATCGAT | 1 cut(s) | 51 |
| BsiSI | CCGG | 4 cut(s) | 801, 828, 885, 1155 |
| BslFI | GGGAC | 2 cut(s) | 1195, 1240 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 948, 963, 1374 |
| BsmAI | GTCTC | 2 cut(s) | 825, 1268 |
| BsmFI | GGGAC | 2 cut(s) | 1195, 1240 |
| BsmI | GAATGC | 1 cut(s) | 980 |
| BsnI | GGCC | 3 cut(s) | 32, 855, 1336 |
| Bsp1286I | GDGCHC | 1 cut(s) | 432 |
| Bsp13I | TCCGGA | 2 cut(s) | 827, 884 |
| Bsp143I | GATC | 8 cut(s) | 48, 52, 195, 283, 467, 588, 625, 678 |
| BspACI | CCGC | 5 cut(s) | 895, 912, 997, 1033, 1253 |
| BspANI | GGCC | 3 cut(s) | 32, 855, 1336 |
| BspCNI | CTCAG | 1 cut(s) | 146 |
| BspDI | ATCGAT | 1 cut(s) | 51 |
| BspEI | TCCGGA | 2 cut(s) | 827, 884 |
| BspFNI | CGCG | 1 cut(s) | 897 |
| BspHI | TCATGA | 1 cut(s) | 622 |
| BspLI | GGNNCC | 3 cut(s) | 88, 105, 805 |
| BspMI | ACCTGC | 1 cut(s) | 448 |
| BspPI | GGATC | 2 cut(s) | 278, 475 |
| BspT107I | GGYRCC | 1 cut(s) | 803 |
| BsrBI | CCGCTC | 1 cut(s) | 999 |
| BsrDI | GCAATG | 1 cut(s) | 1211 |
| BsrI | ACTGG | 1 cut(s) | 1072 |
| BssECI | CCNNGG | 2 cut(s) | 1028, 1155 |
| BssMI | GATC | 8 cut(s) | 48, 52, 195, 283, 467, 588, 625, 678 |
| BssNI | GRCGYC | 2 cut(s) | 383, 1184 |
| Bst2UI | CCWGG | 1 cut(s) | 247 |
| Bst4CI | ACNGT | 1 cut(s) | 464 |
| Bst6I | CTCTTC | 2 cut(s) | 219, 1349 |
| BstACI | GRCGYC | 2 cut(s) | 383, 1184 |
| BstDEI | CTNAG | 1 cut(s) | 133 |
| BstDSI | CCRYGG | 1 cut(s) | 1028 |
| BstF5I | GGATG | 4 cut(s) | 327, 702, 824, 1165 |
| BstFNI | CGCG | 1 cut(s) | 897 |
| BstKTI | GATC | 8 cut(s) | 51, 55, 198, 286, 470, 591, 628, 681 |
| BstMAI | GTCTC | 2 cut(s) | 825, 1268 |
| BstMBI | GATC | 8 cut(s) | 48, 52, 195, 283, 467, 588, 625, 678 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 541, 743, 900, 1030 |
| BstNI | CCWGG | 1 cut(s) | 247 |
| BstNSI | RCATGY | 1 cut(s) | 982 |
| BstSCI | CCNGG | 2 cut(s) | 245, 1154 |
| BstSLI | GKGCMC | 1 cut(s) | 432 |
| BstUI | CGCG | 1 cut(s) | 897 |
| BstV1I | GCAGC | 1 cut(s) | 901 |
| BstV2I | GAAGAC | 1 cut(s) | 142 |
| BstX2I | RGATCY | 1 cut(s) | 283 |
| BstYI | RGATCY | 1 cut(s) | 283 |
| Bsu15I | ATCGAT | 1 cut(s) | 51 |
| BsuI | GTATCC | 2 cut(s) | 403, 655 |
| BsuRI | GGCC | 3 cut(s) | 32, 855, 1336 |
| BsuTUI | ATCGAT | 1 cut(s) | 51 |
| BtgI | CCRYGG | 1 cut(s) | 1028 |
| BtsCI | GGATG | 4 cut(s) | 327, 702, 824, 1165 |
| BtsI | GCAGTG | 1 cut(s) | 1051 |
| BtsIMutI | CAGTG | 3 cut(s) | 432, 469, 1051 |
| BveI | ACCTGC | 1 cut(s) | 448 |
| CciI | TCATGA | 1 cut(s) | 622 |
| Cfr13I | GGNCC | 2 cut(s) | 229, 1334 |
| ClaI | ATCGAT | 1 cut(s) | 51 |
| CseI | GACGC | 2 cut(s) | 372, 541 |
| Csp6I | GTAC | 4 cut(s) | 112, 850, 1209, 1330 |
| CviAII | CATG | 5 cut(s) | 122, 397, 623, 979, 1293 |
| CviQI | GTAC | 4 cut(s) | 112, 850, 1209, 1330 |
| DdeI | CTNAG | 1 cut(s) | 133 |
| DpnI | GATC | 8 cut(s) | 50, 54, 197, 285, 469, 590, 627, 680 |
| DpnII | GATC | 8 cut(s) | 48, 52, 195, 283, 467, 588, 625, 678 |
| EaeI | YGGCCR | 1 cut(s) | 30 |
| Eam1104I | CTCTTC | 2 cut(s) | 219, 1349 |
| EarI | CTCTTC | 2 cut(s) | 219, 1349 |
| Eco47I | GGWCC | 1 cut(s) | 229 |
| Eco57I | CTGAAG | 1 cut(s) | 136 |
| EcoO109I | RGGNCCY | 1 cut(s) | 229 |
| EcoRII | CCWGG | 1 cut(s) | 245 |
| EcoT22I | ATGCAT | 1 cut(s) | 980 |
| FaeI | CATG | 5 cut(s) | 125, 400, 626, 982, 1296 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 216, 248 |
| FaqI | GGGAC | 2 cut(s) | 1195, 1240 |
| FatI | CATG | 5 cut(s) | 121, 396, 622, 978, 1292 |
| FauI | CCCGC | 1 cut(s) | 1246 |
| FbaI | TGATCA | 1 cut(s) | 625 |
| Fnu4HI | GCNGC | 2 cut(s) | 895, 915 |
| FokI | GGATG | 4 cut(s) | 314, 689, 811, 1172 |
| Fsp4HI | GCNGC | 2 cut(s) | 895, 915 |
| FspBI | CTAG | 1 cut(s) | 516 |
| GluI | GCNGC | 2 cut(s) | 895, 915 |
| GsuI | CTGGAG | 2 cut(s) | 90, 268 |
| HaeIII | GGCC | 3 cut(s) | 32, 855, 1336 |
| HapII | CCGG | 4 cut(s) | 801, 828, 885, 1155 |
| HgaI | GACGC | 2 cut(s) | 372, 541 |
| Hin1I | GRCGYC | 2 cut(s) | 383, 1184 |
| Hin1II | CATG | 5 cut(s) | 125, 400, 626, 982, 1296 |
| HincII | GTYRAC | 4 cut(s) | 294, 367, 730, 766 |
| HindII | GTYRAC | 4 cut(s) | 294, 367, 730, 766 |
| HinfI | GANTC | 7 cut(s) | 506, 584, 694, 888, 908, 953, 1135 |
| HpaI | GTTAAC | 1 cut(s) | 730 |
| HpaII | CCGG | 4 cut(s) | 801, 828, 885, 1155 |
| HphI | GGTGA | 3 cut(s) | 227, 884, 1336 |
| Hpy166II | GTNNAC | 8 cut(s) | 294, 341, 367, 730, 766, 850, 1051, 1114 |
| Hpy188I | TCNGA | 5 cut(s) | 200, 472, 502, 781, 1083 |
| Hpy188III | TCNNGA | 9 cut(s) | 107, 173, 306, 435, 623, 828, 885, 1214, 1271 |
| Hpy8I | GTNNAC | 8 cut(s) | 294, 341, 367, 730, 766, 850, 1051, 1114 |
| Hpy99I | CGWCG | 1 cut(s) | 1189 |
| HpyAV | CCTTC | 2 cut(s) | 555, 1349 |
| HpyCH4III | ACNGT | 1 cut(s) | 464 |
| HpyCH4IV | ACGT | 3 cut(s) | 290, 762, 1184 |
| HpyCH4V | TGCA | 9 cut(s) | 352, 443, 454, 903, 939, 978, 1044, 1151, 1204 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 541, 743, 900, 1030 |
| HpyF3I | CTNAG | 1 cut(s) | 133 |
| HpySE526I | ACGT | 3 cut(s) | 290, 762, 1184 |
| Hsp92I | GRCGYC | 2 cut(s) | 383, 1184 |
| Hsp92II | CATG | 5 cut(s) | 125, 400, 626, 982, 1296 |
| Kpn2I | TCCGGA | 2 cut(s) | 827, 884 |
| Ksp22I | TGATCA | 1 cut(s) | 625 |
| KspAI | GTTAAC | 1 cut(s) | 730 |
| Kzo9I | GATC | 8 cut(s) | 48, 52, 195, 283, 467, 588, 625, 678 |
| LmnI | GCTCC | 4 cut(s) | 109, 524, 1004, 1021 |
| Lsp1109I | GCAGC | 1 cut(s) | 901 |
| LweI | GCATC | 3 cut(s) | 336, 912, 1191 |
| MaeI | CTAG | 1 cut(s) | 516 |
| MaeII | ACGT | 3 cut(s) | 290, 762, 1184 |
| MaeIII | GTNAC | 1 cut(s) | 529 |
| MalI | GATC | 8 cut(s) | 50, 54, 197, 285, 469, 590, 627, 680 |
| MbiI | CCGCTC | 1 cut(s) | 999 |
| MboI | GATC | 8 cut(s) | 48, 52, 195, 283, 467, 588, 625, 678 |
| MboII | GAAGA | 5 cut(s) | 142, 236, 789, 1299, 1336 |
| MfeI | CAATTG | 1 cut(s) | 78 |
| MflI | RGATCY | 1 cut(s) | 283 |
| MhlI | GDGCHC | 1 cut(s) | 432 |
| MlsI | TGGCCA | 1 cut(s) | 32 |
| MluNI | TGGCCA | 1 cut(s) | 32 |
| MlyI | GAGTC | 3 cut(s) | 897, 902, 1129 |
| Mox20I | TGGCCA | 1 cut(s) | 32 |
| Mph1103I | ATGCAT | 1 cut(s) | 980 |
| MroI | TCCGGA | 2 cut(s) | 827, 884 |
| MscI | TGGCCA | 1 cut(s) | 32 |
| MseI | TTAA | 8 cut(s) | 236, 402, 578, 600, 615, 729, 1077, 1393 |
| Msp20I | TGGCCA | 1 cut(s) | 32 |
| MspA1I | CMGCKG | 1 cut(s) | 914 |
| MspI | CCGG | 4 cut(s) | 801, 828, 885, 1155 |
| MspR9I | CCNGG | 2 cut(s) | 247, 1156 |
| MunI | CAATTG | 1 cut(s) | 78 |
| Mva1269I | GAATGC | 1 cut(s) | 980 |
| MvaI | CCWGG | 1 cut(s) | 247 |
| MvnI | CGCG | 1 cut(s) | 897 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 541, 743, 900, 1030 |
| NciI | CCSGG | 1 cut(s) | 1156 |
| NdeII | GATC | 8 cut(s) | 48, 52, 195, 283, 467, 588, 625, 678 |
| NlaIII | CATG | 5 cut(s) | 125, 400, 626, 982, 1296 |
| NlaIV | GGNNCC | 3 cut(s) | 88, 105, 805 |
| NmuCI | GTSAC | 1 cut(s) | 529 |
| NsiI | ATGCAT | 1 cut(s) | 980 |
| NspI | RCATGY | 1 cut(s) | 982 |
| PagI | TCATGA | 1 cut(s) | 622 |
| PctI | GAATGC | 1 cut(s) | 980 |
| PfeI | GAWTC | 4 cut(s) | 506, 584, 694, 953 |
| PflFI | GACNNNGTC | 1 cut(s) | 761 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 963 |
| PkrI | GCNGC | 2 cut(s) | 896, 916 |
| PleI | GAGTC | 3 cut(s) | 896, 902, 1129 |
| PpsI | GAGTC | 3 cut(s) | 896, 902, 1129 |
| PpuMI | RGGWCCY | 1 cut(s) | 229 |
| Psp5II | RGGWCCY | 1 cut(s) | 229 |
| Psp6I | CCWGG | 1 cut(s) | 245 |
| PspGI | CCWGG | 1 cut(s) | 245 |
| PspN4I | GGNNCC | 3 cut(s) | 88, 105, 805 |
| PspPI | GGNCC | 2 cut(s) | 229, 1334 |
| PspPPI | RGGWCCY | 1 cut(s) | 229 |
| PsuI | RGATCY | 1 cut(s) | 283 |
| PsyI | GACNNNGTC | 1 cut(s) | 761 |
| RsaI | GTAC | 4 cut(s) | 113, 851, 1210, 1331 |
| RsaNI | GTAC | 4 cut(s) | 112, 850, 1209, 1330 |
| SaqAI | TTAA | 8 cut(s) | 236, 402, 578, 600, 615, 729, 1077, 1393 |
| SatI | GCNGC | 2 cut(s) | 895, 915 |
| Sau3AI | GATC | 8 cut(s) | 48, 52, 195, 283, 467, 588, 625, 678 |
| Sau96I | GGNCC | 2 cut(s) | 229, 1334 |
| SchI | GAGTC | 3 cut(s) | 897, 902, 1129 |
| ScrFI | CCNGG | 2 cut(s) | 247, 1156 |
| SduI | GDGCHC | 1 cut(s) | 432 |
| SfaNI | GCATC | 3 cut(s) | 336, 912, 1191 |
| SinI | GGWCC | 1 cut(s) | 229 |
| SmlI | CTYRAG | 1 cut(s) | 60 |
| SmoI | CTYRAG | 1 cut(s) | 60 |
| SsiI | CCGC | 5 cut(s) | 895, 912, 997, 1033, 1253 |
| SspI | AATATT | 1 cut(s) | 553 |
| SspMI | CTAG | 1 cut(s) | 516 |
| StyD4I | CCNGG | 2 cut(s) | 245, 1154 |
| TaaI | ACNGT | 1 cut(s) | 464 |
| TaiI | ACGT | 3 cut(s) | 293, 765, 1187 |
| TaqI | TCGA | 9 cut(s) | 51, 208, 509, 571, 587, 692, 868, 906, 1187 |
| TaqII | GACCGA | 1 cut(s) | 388 |
| TatI | WGTACW | 1 cut(s) | 1208 |
| TauI | GCSGC | 1 cut(s) | 897 |
| TfiI | GAWTC | 4 cut(s) | 506, 584, 694, 953 |
| Tru1I | TTAA | 8 cut(s) | 236, 402, 578, 600, 615, 729, 1077, 1393 |
| Tru9I | TTAA | 8 cut(s) | 236, 402, 578, 600, 615, 729, 1077, 1393 |
| TscAI | CASTG | 3 cut(s) | 432, 469, 1051 |
| TseFI | GTSAC | 1 cut(s) | 529 |
| TseI | GCWGC | 1 cut(s) | 914 |
| Tsp45I | GTSAC | 1 cut(s) | 529 |
| TspDTI | ATGAA | 7 cut(s) | 17, 110, 237, 519, 611, 646, 1115 |
| TspGWI | ACGGA | 3 cut(s) | 511, 1017, 1191 |
| TspRI | CASTG | 3 cut(s) | 432, 469, 1051 |
| Tth111I | GACNNNGTC | 1 cut(s) | 761 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 963 |
| VpaK11BI | GGWCC | 1 cut(s) | 229 |
| XapI | RAATTY | 2 cut(s) | 496, 1093 |
| XceI | RCATGY | 1 cut(s) | 982 |
| XspI | CTAG | 1 cut(s) | 516 |
| ZraI | GACGTC | 1 cut(s) | 1185 |
| Zsp2I | ATGCAT | 1 cut(s) | 980 |