pycom111g01330

lysine histidine transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Reverse (-)
847602 .. 848330
729 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g01330.5

Sequence Viewer

Length: 435 bp
ATGTCATTAAGTTATTCAACTACTGCATGGACGGCTTCCATCCACAAAGGTGTTCAGCCGGATGTAGCATACGGTTATAAATCTGGTAGCACGCCGGGAACAGTCTTTAACTTCTTCACTGCCTTGGGGGACGTAGCTTTTGCCTATGCAGGCCACGATGTGCAATCAAAGAAGCCTATGTGGAGAGGCGTAGTGTTGGCCTACATCGTCGTGGCATTGTGCTATTTTCCGGACAACATCCTCATCTCGTTGGAGAAGCCTGAATGGCTCATCATTACAGCAAACCTGTTCGTTGTCGTCCATGTCATTGGCAGTTATCAGCTATTTGCAATGCCAGTATTTGACATGGTAGAAACCTTGTTGGTGAAGAAACTACACTTCAGACCTACCCTAATTCTTCGCTTCGTTTCCCAGAATATCTATGTCGGTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

145

Amino Acids

16.1

Weight (kDa)

9.02

Isoelectric Point (pI)

30.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 78
AccIII TCCGGA 1 cut(s) 229
AcuI CTGAAG 1 cut(s) 364
AdeI CACNNNGTG 1 cut(s) 160
AgsI TTSAA 1 cut(s) 18
AleI CACNNNNGTG 1 cut(s) 48
AluBI AGCT 2 cut(s) 137, 322
AluI AGCT 2 cut(s) 137, 322
Aor13HI TCCGGA 1 cut(s) 229
AoxI GGCC 2 cut(s) 151, 198
ArsI GACNNNNNNTTYG 2 cut(s) 122, 154
AsuC2I CCSGG 1 cut(s) 96
AsuHPI GGTGA 1 cut(s) 376
BccI CCATC 1 cut(s) 47
BceAI ACGGC 1 cut(s) 48
BcnI CCSGG 1 cut(s) 96
BglI GCCNNNNNGGC 1 cut(s) 265
Bme1390I CCNGG 1 cut(s) 96
BmrFI CCNGG 1 cut(s) 96
BpuMI CCSGG 1 cut(s) 96
BsaJI CCNNGG 1 cut(s) 123
BsaWI WCCGGW 1 cut(s) 229
Bse1I ACTGG 1 cut(s) 335
Bse3DI GCAATG 1 cut(s) 336
BseAI TCCGGA 1 cut(s) 229
BseDI CCNNGG 1 cut(s) 123
BseGI GGATG 3 cut(s) 39, 67, 237
BseMI GCAATG 1 cut(s) 336
BseNI ACTGG 1 cut(s) 335
BshFI GGCC 2 cut(s) 153, 200
BsiSI CCGG 3 cut(s) 59, 95, 230
BslFI GGGAC 1 cut(s) 143
BsmFI GGGAC 1 cut(s) 143
BsnI GGCC 2 cut(s) 153, 200
Bsp13I TCCGGA 1 cut(s) 229
BspANI GGCC 2 cut(s) 153, 200
BspEI TCCGGA 1 cut(s) 229
BsrDI GCAATG 1 cut(s) 336
BsrI ACTGG 1 cut(s) 335
BssECI CCNNGG 1 cut(s) 123
BssT1I CCWWGG 1 cut(s) 123
Bst4CI ACNGT 2 cut(s) 74, 103
BstC8I GCNNGC 2 cut(s) 92, 151
BstF5I GGATG 3 cut(s) 39, 67, 237
BstMWI GCNNNNNNNGC 2 cut(s) 32, 265
BstSCI CCNGG 1 cut(s) 94
BstXI CCANNNNNNTGG 1 cut(s) 308
BsuRI GGCC 2 cut(s) 153, 200
BtsCI GGATG 3 cut(s) 39, 67, 237
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 1 cut(s) 117
Cac8I GCNNGC 2 cut(s) 92, 151
CviAII CATG 3 cut(s) 27, 302, 346
CviJI RGCY 9 cut(s) 35, 58, 137, 153, 175, 200, 259, 268, 322
CviKI_1 RGCY 9 cut(s) 35, 58, 137, 153, 175, 200, 259, 268, 322
DraIII CACNNNGTG 1 cut(s) 160
Eco130I CCWWGG 1 cut(s) 123
Eco57I CTGAAG 1 cut(s) 364
EcoT14I CCWWGG 1 cut(s) 123
ErhI CCWWGG 1 cut(s) 123
FaeI CATG 3 cut(s) 30, 305, 349
FaiI YATR 8 cut(s) 28, 70, 78, 147, 179, 303, 347, 423
FaqI GGGAC 1 cut(s) 143
FatI CATG 3 cut(s) 26, 301, 345
FokI GGATG 3 cut(s) 26, 74, 224
HaeIII GGCC 2 cut(s) 153, 200
HapII CCGG 3 cut(s) 59, 95, 230
Hin1II CATG 3 cut(s) 30, 305, 349
HpaII CCGG 3 cut(s) 59, 95, 230
HphI GGTGA 1 cut(s) 376
Hpy188I TCNGA 1 cut(s) 383
Hpy188III TCNNGA 1 cut(s) 230
Hpy99I CGWCG 1 cut(s) 212
HpyCH4III ACNGT 2 cut(s) 74, 103
HpyCH4IV ACGT 1 cut(s) 132
HpyCH4V TGCA 4 cut(s) 26, 149, 163, 329
HpyF10VI GCNNNNNNNGC 2 cut(s) 32, 265
HpySE526I ACGT 1 cut(s) 132
Hsp92II CATG 3 cut(s) 30, 305, 349
Kpn2I TCCGGA 1 cut(s) 229
LpnPI CCDG 9 cut(s) 69, 72, 108, 135, 243, 273, 299, 348, 425
MaeII ACGT 1 cut(s) 132
MboII GAAGA 3 cut(s) 106, 379, 389
MluCI AATT 1 cut(s) 393
MmeI TCCRAC 1 cut(s) 231
MnlI CCTC 2 cut(s) 179, 251
MroI TCCGGA 1 cut(s) 229
MseI TTAA 2 cut(s) 8, 108
MslI CAYNNNNRTG 2 cut(s) 48, 209
MspI CCGG 3 cut(s) 59, 95, 230
MspR9I CCNGG 1 cut(s) 96
MwoI GCNNNNNNNGC 2 cut(s) 32, 265
NciI CCSGG 1 cut(s) 96
NlaIII CATG 3 cut(s) 30, 305, 349
OliI CACNNNNGTG 1 cut(s) 48
PsiI TTATAA 1 cut(s) 78
RseI CAYNNNNRTG 2 cut(s) 48, 209
SaqAI TTAA 2 cut(s) 8, 108
ScrFI CCNGG 1 cut(s) 96
SetI ASST 7 cut(s) 52, 135, 139, 288, 324, 359, 388
SmiMI CAYNNNNRTG 2 cut(s) 48, 209
Sse9I AATT 1 cut(s) 393
StyD4I CCNGG 1 cut(s) 94
StyI CCWWGG 1 cut(s) 123
TaaI ACNGT 2 cut(s) 74, 103
TaiI ACGT 1 cut(s) 135
TasI AATT 1 cut(s) 393
Tru1I TTAA 2 cut(s) 8, 108
Tru9I TTAA 2 cut(s) 8, 108
TscAI CASTG 1 cut(s) 124
TspRI CASTG 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.