Rh2BG669900

lysine histidine transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0008192
Physical Location & Seq
Forward (+)
88224354 .. 88226940
2587 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG669900.1

Sequence Viewer

Length: 1170 bp
ATGTTCCATGTTCTAATATTTCCTTCCAAGAGTTGCATCCTACTCGGTCTATCAATGGGAATTCAAGATCCAACCGACTATAGTTCTTCTGCCCCAAGCAATATGGATGAGCAACCGGAGAAGCAAGCAAAGATAGATGAACAACTACGGAGGCAGAAGGAAATTGATGACTGGCTTCCAATTACTTCATCAAGGAATGCAAAATGGTGGTACTCAGCTTTCCACAATGTCACTGCCATGGTTGGAGCTGGTGTCCTCAGTCTTCCCTTTGCCATGTCTAATCTTGGATGGGGTCCTGGTGTAGTTATTCTGATATTATCATGGGTGATCACTTTATTCACATTATGGCAAATGGTTGAGATGCATGAAATGGTTCCGGGAAAGCGGTTTGATAGGTACCATGAACTGGGTCAACATGCCTTTGGTGAAAAGCTTGGTCTTTGGATTGTGGTGCCCCAACAGCTGATCTGCGAAGTTGGCGTGGACATTGTGTACATGGTCACTGGAGGAAAATCGCTGCAGAAGGTCCATAACATAGTTCGTAAAGACGAGAAAGACTCAATCAAACTCAGTTACTTCATCATGATATTTGCCTCTGCTCATTTTGTACTTGCTCATCTCCCCAACTTCAACTCCATATCTGGGGTGTCTTTGGCAGCGGCAGTCATGTCATTAAGTTACTCTACTATTGCATGGACGGCTTCAATCCATAAGGGTGTTCAGGCAGATGTAGATTATGGTTATTTAGCCCCCAGCACATCAGGAACAGTCTTTAACTTCTTCAGTGCCTTGGGCGACGTTGCTTTTGCCTATGCAGGCCACAATGTGGTTCTAGAGATTCAAGCAACAATCCCTTCCACACCTGAAACCCCATCGAAGAAGCCTATGTGGAGGGGTGTTGTGATAGCCTACATAGTTGTGGCTTTGTGCTATTTTCCAGTGGCTCTCATTGGATACTACACCTTTGGCAACAAAGTTGAGGACAACATCTTAATATCATTGGAGAAACCTGAATGGCTCATCATAATGGCAAACATGTTTGTTGTTGTCCATGTTATTGGGAGTTATCAGATTTGCATTACATTGGGAGTCATGCTCATGATCCTATCACCTATTGGAGGCTTAAGGAGTATCATACTTCAAGCCAAGAACTACAAGTTCTACAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

389

Amino Acids

43.3

Weight (kDa)

6.59

Isoelectric Point (pI)

43.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 66 - 361 8.4e-82 Transmembrane amino acid transporter protein
Trp_Tyr_perm PF03222 71 - 236 2.4e-09 Tryptophan/tyrosine permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 396
AccB1I GGYRCC 2 cut(s) 396, 451
AccB7I CCANNNNNTGG 2 cut(s) 406, 826
AciI CCGC 2 cut(s) 385, 659
AclWI GGATC 2 cut(s) 62, 1096
AcsI RAATTY 1 cut(s) 60
AcuI CTGAAG 1 cut(s) 766
AdeI CACNNNGTG 1 cut(s) 826
AfaI GTAC 4 cut(s) 212, 398, 494, 609
AfiI CCNNNNNNNGG 4 cut(s) 406, 642, 826, 1118
AflII CTTAAG 1 cut(s) 1123
AflIII ACRYGT 1 cut(s) 1035
AgsI TTSAA 5 cut(s) 65, 631, 705, 842, 1142
AjnI CCWGG 1 cut(s) 295
AluBI AGCT 4 cut(s) 218, 248, 433, 463
AluI AGCT 4 cut(s) 218, 248, 433, 463
AlwI GGATC 2 cut(s) 62, 1096
AoxI GGCC 1 cut(s) 817
ApeKI GCWGC 2 cut(s) 517, 656
ApoI RAATTY 1 cut(s) 60
ArsI GACNNNNNNTTYG 2 cut(s) 788, 820
Asp700I GAANNNNTTC 1 cut(s) 372
Asp718I GGTACC 1 cut(s) 396
AspS9I GGNCC 2 cut(s) 293, 526
AsuC2I CCSGG 1 cut(s) 378
AsuHPI GGTGA 3 cut(s) 337, 437, 1101
AvaII GGWCC 2 cut(s) 293, 526
BaeGI GKGCMC 1 cut(s) 456
BanI GGYRCC 2 cut(s) 396, 451
BbsI GAAGAC 1 cut(s) 254
BbvI GCAGC 2 cut(s) 504, 668
BccI CCATC 2 cut(s) 282, 880
BceAI ACGGC 1 cut(s) 714
BcgI CGANNNNNNTGC 2 cut(s) 25, 59
BciT130I CCWGG 1 cut(s) 297
BciVI GTATCC 1 cut(s) 947
BclI TGATCA 1 cut(s) 327
BcnI CCSGG 1 cut(s) 378
BfaI CTAG 1 cut(s) 833
BfmI CTRYAG 2 cut(s) 79, 518
BfrI CTTAAG 1 cut(s) 1123
BfuI GTATCC 1 cut(s) 947
BisI GCNGC 3 cut(s) 518, 657, 660
BlsI GCNGC 3 cut(s) 519, 658, 661
Bme1390I CCNGG 2 cut(s) 297, 378
Bme18I GGWCC 2 cut(s) 293, 526
BmgT120I GGNCC 2 cut(s) 293, 526
BmiI GGNNCC 4 cut(s) 294, 375, 398, 453
BmrFI CCNGG 2 cut(s) 297, 378
BmrI ACTGGG 1 cut(s) 416
BmsI GCATC 2 cut(s) 45, 351
BmuI ACTGGG 1 cut(s) 416
BpiI GAAGAC 1 cut(s) 254
BplI GAGNNNNNCTC 4 cut(s) 542, 574, 1080, 1112
BpmI CTGGAG 1 cut(s) 525
BpuMI CCSGG 1 cut(s) 378
BsaJI CCNNGG 2 cut(s) 237, 789
BsaWI WCCGGW 1 cut(s) 115
BsaXI ACNNNNNCTCC 4 cut(s) 237, 267, 617, 647
Bsc4I CCNNNNNNNGG 4 cut(s) 406, 642, 826, 1118
Bse1I ACTGG 4 cut(s) 176, 411, 508, 938
BseBI CCWGG 1 cut(s) 297
BseDI CCNNGG 2 cut(s) 237, 789
BseGI GGATG 3 cut(s) 36, 112, 293
BseLI CCNNNNNNNGG 4 cut(s) 406, 642, 826, 1118
BseMII CTCAG 3 cut(s) 228, 271, 583
BseNI ACTGG 4 cut(s) 176, 411, 508, 938
BseSI GKGCMC 1 cut(s) 456
BseXI GCAGC 2 cut(s) 504, 668
BseYI CCCAGC 1 cut(s) 752
BshFI GGCC 1 cut(s) 819
BshNI GGYRCC 2 cut(s) 396, 451
BsiSI CCGG 2 cut(s) 116, 377
BslI CCNNNNNNNGG 4 cut(s) 406, 642, 826, 1118
BsmI GAATGC 1 cut(s) 202
BsnI GGCC 1 cut(s) 819
Bsp1286I GDGCHC 1 cut(s) 456
Bsp1407I TGTACA 1 cut(s) 492
Bsp143I GATC 4 cut(s) 67, 327, 465, 1101
Bsp19I CCATGG 1 cut(s) 237
BspACI CCGC 2 cut(s) 385, 659
BspANI GGCC 1 cut(s) 819
BspCNI CTCAG 3 cut(s) 227, 270, 582
BspHI TCATGA 2 cut(s) 582, 1098
BspLI GGNNCC 4 cut(s) 294, 375, 398, 453
BspMAI CTGCAG 1 cut(s) 522
BspPI GGATC 2 cut(s) 62, 1096
BspT107I GGYRCC 2 cut(s) 396, 451
BspTI CTTAAG 1 cut(s) 1123
BsrGI TGTACA 1 cut(s) 492
BsrI ACTGG 4 cut(s) 176, 411, 508, 938
BssECI CCNNGG 2 cut(s) 237, 789
BssMI GATC 4 cut(s) 67, 327, 465, 1101
BssT1I CCWWGG 2 cut(s) 237, 789
Bst2UI CCWGG 1 cut(s) 297
Bst4CI ACNGT 1 cut(s) 769
BstAFI CTTAAG 1 cut(s) 1123
BstAUI TGTACA 1 cut(s) 492
BstC8I GCNNGC 2 cut(s) 126, 817
BstDEI CTNAG 3 cut(s) 214, 257, 569
BstDSI CCRYGG 1 cut(s) 237
BstENI CCTNNNNNAGG 1 cut(s) 1116
BstF5I GGATG 3 cut(s) 36, 112, 293
BstKTI GATC 4 cut(s) 70, 330, 468, 1104
BstMBI GATC 4 cut(s) 67, 327, 465, 1101
BstMWI GCNNNNNNNGC 3 cut(s) 460, 477, 698
BstNI CCWGG 1 cut(s) 297
BstNSI RCATGY 2 cut(s) 419, 1039
BstSCI CCNGG 2 cut(s) 295, 376
BstSFI CTRYAG 2 cut(s) 79, 518
BstSLI GKGCMC 1 cut(s) 456
BstV1I GCAGC 2 cut(s) 504, 668
BstV2I GAAGAC 1 cut(s) 254
BstX2I RGATCY 1 cut(s) 67
BstXI CCANNNNNNTGG 1 cut(s) 1058
BstYI RGATCY 1 cut(s) 67
BsuI GTATCC 1 cut(s) 947
BsuRI GGCC 1 cut(s) 819
BtgI CCRYGG 1 cut(s) 237
BtsCI GGATG 3 cut(s) 36, 112, 293
BtsI GCAGTG 1 cut(s) 231
BtsIMutI CAGTG 4 cut(s) 231, 501, 790, 945
Cac8I GCNNGC 2 cut(s) 126, 817
CciI TCATGA 2 cut(s) 582, 1098
Cfr13I GGNCC 2 cut(s) 293, 526
Csp6I GTAC 4 cut(s) 211, 397, 493, 608
CviQI GTAC 4 cut(s) 211, 397, 493, 608
DdeI CTNAG 3 cut(s) 214, 257, 569
DpnI GATC 4 cut(s) 69, 329, 467, 1103
DpnII GATC 4 cut(s) 67, 327, 465, 1101
DraIII CACNNNGTG 1 cut(s) 826
Eco130I CCWWGG 2 cut(s) 237, 789
Eco47I GGWCC 2 cut(s) 293, 526
Eco57I CTGAAG 1 cut(s) 766
EcoNI CCTNNNNNAGG 1 cut(s) 1116
EcoO109I RGGNCCY 1 cut(s) 293
EcoRI GAATTC 1 cut(s) 60
EcoRII CCWGG 1 cut(s) 295
EcoT14I CCWWGG 2 cut(s) 237, 789
EcoT22I ATGCAT 1 cut(s) 366
ErhI CCWWGG 2 cut(s) 237, 789
FbaI TGATCA 1 cut(s) 327
Fnu4HI GCNGC 3 cut(s) 518, 657, 660
FokI GGATG 3 cut(s) 23, 119, 300
Fsp4HI GCNGC 3 cut(s) 518, 657, 660
FspBI CTAG 1 cut(s) 833
GluI GCNGC 3 cut(s) 518, 657, 660
GsaI CCCAGC 1 cut(s) 756
GsuI CTGGAG 1 cut(s) 525
HaeIII GGCC 1 cut(s) 819
HapII CCGG 2 cut(s) 116, 377
HincII GTYRAC 1 cut(s) 413
HindII GTYRAC 1 cut(s) 413
HindIII AAGCTT 1 cut(s) 431
HinfI GANTC 3 cut(s) 557, 838, 1089
HpaII CCGG 2 cut(s) 116, 377
HphI GGTGA 3 cut(s) 337, 437, 1101
Hpy166II GTNNAC 3 cut(s) 413, 484, 493
Hpy188I TCNGA 2 cut(s) 312, 1071
Hpy188III TCNNGA 5 cut(s) 65, 583, 762, 833, 1099
Hpy8I GTNNAC 3 cut(s) 413, 484, 493
Hpy99I CGWCG 1 cut(s) 800
HpyAV CCTTC 4 cut(s) 33, 151, 517, 864
HpyCH4III ACNGT 1 cut(s) 769
HpyCH4IV ACGT 1 cut(s) 798
HpyCH4V TGCA 7 cut(s) 36, 200, 364, 520, 692, 815, 1077
HpyF10VI GCNNNNNNNGC 3 cut(s) 460, 477, 698
HpyF3I CTNAG 3 cut(s) 214, 257, 569
HpySE526I ACGT 1 cut(s) 798
KpnI GGTACC 1 cut(s) 400
Ksp22I TGATCA 1 cut(s) 327
Kzo9I GATC 4 cut(s) 67, 327, 465, 1101
LmnI GCTCC 1 cut(s) 245
Lsp1109I GCAGC 2 cut(s) 504, 668
LweI GCATC 2 cut(s) 45, 351
MaeI CTAG 1 cut(s) 833
MaeII ACGT 1 cut(s) 798
MaeIII GTNAC 4 cut(s) 229, 499, 572, 677
MalI GATC 4 cut(s) 69, 329, 467, 1103
MboI GATC 4 cut(s) 67, 327, 465, 1101
MboII GAAGA 4 cut(s) 78, 254, 772, 889
MfeI CAATTG 1 cut(s) 1165
MflI RGATCY 1 cut(s) 67
MhlI GDGCHC 1 cut(s) 456
MluCI AATT 4 cut(s) 60, 162, 180, 1165
MlyI GAGTC 2 cut(s) 551, 1098
MmeI TCCRAC 2 cut(s) 95, 223
MnlI CCTC 7 cut(s) 144, 266, 500, 604, 885, 973, 1112
Mph1103I ATGCAT 1 cut(s) 366
MroXI GAANNNNTTC 1 cut(s) 372
MseI TTAA 4 cut(s) 674, 774, 992, 1124
MslI CAYNNNNRTG 5 cut(s) 236, 714, 917, 1025, 1097
MspA1I CMGCKG 2 cut(s) 463, 659
MspCI CTTAAG 1 cut(s) 1123
MspI CCGG 2 cut(s) 116, 377
MspR9I CCNGG 2 cut(s) 297, 378
MunI CAATTG 1 cut(s) 1165
Mva1269I GAATGC 1 cut(s) 202
MvaI CCWGG 1 cut(s) 297
MwoI GCNNNNNNNGC 3 cut(s) 460, 477, 698
NciI CCSGG 1 cut(s) 378
NcoI CCATGG 1 cut(s) 237
NdeII GATC 4 cut(s) 67, 327, 465, 1101
NlaIV GGNNCC 4 cut(s) 294, 375, 398, 453
NmuCI GTSAC 2 cut(s) 229, 499
NsiI ATGCAT 1 cut(s) 366
NspI RCATGY 2 cut(s) 419, 1039
PagI TCATGA 2 cut(s) 582, 1098
PciI ACATGT 1 cut(s) 1035
PctI GAATGC 1 cut(s) 202
PdmI GAANNNNTTC 1 cut(s) 372
PfeI GAWTC 1 cut(s) 838
PflMI CCANNNNNTGG 2 cut(s) 406, 826
PfoI TCCNGGA 1 cut(s) 376
PkrI GCNGC 3 cut(s) 519, 658, 661
PleI GAGTC 2 cut(s) 551, 1097
PpsI GAGTC 2 cut(s) 551, 1097
PpuMI RGGWCCY 1 cut(s) 293
PscI ACATGT 1 cut(s) 1035
Psp5II RGGWCCY 1 cut(s) 293
Psp6I CCWGG 1 cut(s) 295
PspFI CCCAGC 1 cut(s) 752
PspGI CCWGG 1 cut(s) 295
PspN4I GGNNCC 4 cut(s) 294, 375, 398, 453
PspPI GGNCC 2 cut(s) 293, 526
PspPPI RGGWCCY 1 cut(s) 293
PstI CTGCAG 1 cut(s) 522
PsuI RGATCY 1 cut(s) 67
PvuII CAGCTG 1 cut(s) 463
RsaI GTAC 4 cut(s) 212, 398, 494, 609
RsaNI GTAC 4 cut(s) 211, 397, 493, 608
RseI CAYNNNNRTG 5 cut(s) 236, 714, 917, 1025, 1097
SaqAI TTAA 4 cut(s) 674, 774, 992, 1124
SatI GCNGC 3 cut(s) 518, 657, 660
Sau3AI GATC 4 cut(s) 67, 327, 465, 1101
Sau96I GGNCC 2 cut(s) 293, 526
SchI GAGTC 2 cut(s) 551, 1098
ScrFI CCNGG 2 cut(s) 297, 378
SduI GDGCHC 1 cut(s) 456
SfaNI GCATC 2 cut(s) 45, 351
SfcI CTRYAG 2 cut(s) 79, 518
SinI GGWCC 2 cut(s) 293, 526
SmiMI CAYNNNNRTG 5 cut(s) 236, 714, 917, 1025, 1097
SmlI CTYRAG 1 cut(s) 1123
SmoI CTYRAG 1 cut(s) 1123
Sse9I AATT 4 cut(s) 60, 162, 180, 1165
SsiI CCGC 2 cut(s) 385, 659
SspI AATATT 1 cut(s) 18
SspMI CTAG 1 cut(s) 833
StyD4I CCNGG 2 cut(s) 295, 376
StyI CCWWGG 2 cut(s) 237, 789
TaaI ACNGT 1 cut(s) 769
TaiI ACGT 1 cut(s) 801
TaqI TCGA 1 cut(s) 875
TaqII GACCGA 1 cut(s) 35
TasI AATT 4 cut(s) 60, 162, 180, 1165
TatI WGTACW 2 cut(s) 492, 607
TauI GCSGC 1 cut(s) 662
TfiI GAWTC 1 cut(s) 838
Tru1I TTAA 4 cut(s) 674, 774, 992, 1124
Tru9I TTAA 4 cut(s) 674, 774, 992, 1124
TscAI CASTG 4 cut(s) 238, 508, 790, 945
TseFI GTSAC 2 cut(s) 229, 499
TseI GCWGC 2 cut(s) 517, 656
Tsp45I GTSAC 2 cut(s) 229, 499
TspDTI ATGAA 5 cut(s) 153, 177, 381, 417, 568
TspGWI ACGGA 1 cut(s) 163
TspRI CASTG 4 cut(s) 238, 508, 790, 945
Van91I CCANNNNNTGG 2 cut(s) 406, 826
Vha464I CTTAAG 1 cut(s) 1123
VpaK11BI GGWCC 2 cut(s) 293, 526
XagI CCTNNNNNAGG 1 cut(s) 1116
XapI RAATTY 1 cut(s) 60
XbaI TCTAGA 1 cut(s) 832
XceI RCATGY 2 cut(s) 419, 1039
XmnI GAANNNNTTC 1 cut(s) 372
XspI CTAG 1 cut(s) 833
Zsp2I ATGCAT 1 cut(s) 366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.