Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0004753

Physical Location & Seq

Genomic Coordinates Reverse (-)

2870890 .. 2875597

Gene Structure 4708 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGTACTTTTCCAACCTGAAAATTTTTGAGTATGAGCTTCGGAATTGGCCGCTGGTAGTTGGCAGGGAAAGCTCCCACGTGTCGACAACAAGCTCCCACGTCATCAATTTTGCCTTCTCAGTTTCCCCAAGCACGTACCACCCAATCCAGACAACTCCCAGCTTCCATTTGTTCCCATGGAAACTAAAATTTTCTCGGCCAATTTTCCCGAGAAAATTATCCACAGAAAAAATTGAGAAAGAACCTAATCGTCGTGGGCCGAAGAAATCCATGACGACGTTGATCAGAAAAGTGTGGGAGTTGGTGTCAAGCCGCACGGTTTCGAGTTCAGAGTCAACGTCGTCGTCTTCTTCTTCGAGCTCTCCGTCGGAAACGGCGGGTTTCGGGGCGTTCGATCGAGTGCCGACAGACCTACTGATGCAAATCGTGAGACTGGTGGGGCCCAAGGAAGCCGTGAAATTGAGCGTCGTGTGCAGAGCGTGGCGGTGCGTCGTCTCCGAGAACGAGCTGTGGATTTTCTTTCTAAAGAATCAAAAGCTGGAGGAGGAGAATTATTGGGAATCCTTTGCTTTCTCGGAAACCCATTTGAGATTCGGATACCCACTTCAAACATTCTCGGGTGAGAGTCCCCAGTTGTCCTACATGGGTATTTATGGTCAACGAGTTCAAGTTCCTGGTTCTGTAATCATTGACGGGGGCTCTGGCTATTGCAAGTTTGGCTGGAGCAAATATGCATGTCCATCAGGCCGGTCGGCAACCTTTTTGGAATTTGGTAATGTTGAGTCGCCGATGTACTCTAGACTCCGCCATTTTTTTGTGACTATTTATAGCAGGATGCAGGTGAAACCATCTTCACAGCCCGTGGTTTTGTCTATACCAATCTGCCATTATGATGATACTGAATCTGCTAAAGCATCGAGAAGGCAGCTCAAAGAAGCCATATACAAAGTACTTTTTGACATGAATGTCCCTGCTGTCTGTGCCATTAATCAGGCAACTTTAGCTTTGTATGCAGCAAGACAGACTTCAGGAATTGTTGTAAACATTGGTTTCCAGGTCACTTCTATTGTTCCAATTTTAAATGGTAAAGTTATGCGCAAGGTGGGTGTGGAGGTTATGGGATTGGGAGCACTGAAGCTTACAGGGTTCCTTAGGGAGCTATTGCAGCAGAACAATATCAATTTTGACTCACTGTACACTGTTCGGACTGTGAAAGAGAAACTATGTTATGTTGCTGAGGATTATGAAGCTGAGCTATCAAAAAATACACAAGCATCATTTGGAGCTGGTGGAGAAGGCTGGTTTACTATTTCGAAAGAGCGGTTTCAAACAGGAGAGATCTTATTCCAGCCAAAGCTTGCAGGAGTGCGTACTATGGGTTTGCACCAGGCTGTTGCTCTTTGCATGGAACATTGCCATTCGGCTGAACTAACAGGAGACGATGCTTGGTTCAAGACTGTAGTTTTGTCAGGAGGCACCGCATGTTTACCAGGACTCGCAGGAAGGTTAGAGAAGGAATTACACGGACTTCTCCCTCCATCTGTGTCTAATGGAATCACGGTCATTCCCCCTCCATATGGTGCAGATACAGCATGGTTTGGGGCCAAGATGATCAGCAATCTGAGCACCTTCCCCGGCCCTTGGTGCATGACAAAGAAGCAGTTCCGGCAGAAGTCCAAAATCAAGCTTATGTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005198 GO:0005200 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006996 GO:0007010 GO:0008150 GO:0009987 GO:0016043 GO:0030029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Actin F-box F-box-like

Protein Analysis

566

Amino Acids

63.19

Weight (kDa)

9.29

Isoelectric Point (pI)

43.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	132 - 171	1e-07	F-box-like
F-box	PF00646	132 - 172	3.5e-07	F-box domain
Actin	PF00022	274 - 401	3.2e-14	Actin
Actin	PF00022	397 - 555	7.9e-18	Actin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004753)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56180 AT5G56180 AT5G56180
fragaria_vesca	FvH4_3g41660 FvH4_3g41660 FvH4_3g41660 FvH4_3g41660 FvH4_3g41660 FvH4_3g41660
malus_domestica	MD03G1042500.v1.1 MD11G1043300.v1.1 MD11G1044100.v1.1 MD11G1044700.v1.1 MD11G1045300.v1.1 MD11G1045700.v1.1
prunus_persica	Prupe.6G034100_v2.0.a1 Prupe.6G034100_v2.0.a1 Prupe.6G034100_v2.0.a1 Prupe.6G034100_v2.0.a1
pyrus_communis	pycom03g03280 pycom11g03700
rosa_chinensis	RchiOBHm_Chr5g0074751
rosa_laevigata	RLG00000036501
rosa_multiflora	Rmu_sc0000909.1_g000019
rosa_roxburghii	Rroxscaffold_1G00006830
rosa_rugosa	Rorug05G0433600
rosa_samantha	Rh5AG491300 Rh5BG512700 Rh5CG536400 Rh5DG524700
rosa_wichuraiana	Rw5G045500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	829
AasI	GACNNNNNNGTC	1 cut(s)	965
Acc16I	TGCGCA	1 cut(s)	1097
Acc36I	ACCTGC	1 cut(s)	829
AccB1I	GGYRCC	1 cut(s)	1475
AccBSI	CCGCTC	1 cut(s)	1321
AccI	GTMKAC	1 cut(s)	83
AciI	CCGC	7 cut(s)	50, 313, 377, 484, 805, 1321, 1479
AcoI	YGGCCR	2 cut(s)	47, 197
AcsI	RAATTY	3 cut(s)	21, 188, 767
AcuI	CTGAAG	2 cut(s)	1011, 1154
AcvI	CACGTG	1 cut(s)	79
AfaI	GTAC	6 cut(s)	5, 137, 794, 951, 1196, 1372
AfiI	CCNNNNNNNGG	2 cut(s)	1577, 1641
AflIII	ACRYGT	1 cut(s)	78
AgsI	TTSAA	4 cut(s)	608, 668, 1328, 1453
AjiI	CACGTC	1 cut(s)	100
AjnI	CCWGG	4 cut(s)	673, 1053, 1386, 1489
Alw21I	GWGCWC	3 cut(s)	362, 1132, 1628
Alw26I	GTCTC	3 cut(s)	424, 499, 1431
Ama87I	CYCGRG	2 cut(s)	208, 616
AoxI	GGCC	7 cut(s)	47, 197, 257, 440, 745, 1602, 1636
ApaI	GGGCCC	1 cut(s)	444
ApeKI	GCWGC	3 cut(s)	925, 1013, 1165
ApoI	RAATTY	3 cut(s)	21, 188, 767
ArsI	GACNNNNNNTTYG	2 cut(s)	1447, 1479
AseI	ATTAAT	1 cut(s)	987
Asp700I	GAANNNNTTC	1 cut(s)	1661
AspLEI	GCGC	1 cut(s)	1098
AspS9I	GGNCC	5 cut(s)	257, 440, 441, 1602, 1637
AsuC2I	CCSGG	1 cut(s)	1635
AsuHPI	GGTGA	2 cut(s)	632, 853
AsuII	TTCGAA	1 cut(s)	1313
AvaI	CYCGRG	2 cut(s)	208, 616
AxyI	CCTNAGG	1 cut(s)	1151
BaeGI	GKGCMC	1 cut(s)	444
BanI	GGYRCC	1 cut(s)	1475
BanII	GRGCYC	3 cut(s)	362, 444, 701
BbrPI	CACGTG	1 cut(s)	79
BbsI	GAAGAC	1 cut(s)	339
Bbv12I	GWGCWC	3 cut(s)	362, 1132, 1628
BbvCI	CCTCAGC	1 cut(s)	1236
BbvI	GCAGC	3 cut(s)	937, 1025, 1177
BccI	CCATC	3 cut(s)	748, 856, 1546
BceAI	ACGGC	2 cut(s)	390, 437
BciT130I	CCWGG	4 cut(s)	675, 1055, 1388, 1491
BciVI	GTATCC	1 cut(s)	590
BclI	TGATCA	2 cut(s)	282, 1611
BcnI	CCSGG	1 cut(s)	1635
BcoDI	GTCTC	3 cut(s)	424, 499, 1431
BfaI	CTAG	1 cut(s)	798
BfmI	CTRYAG	1 cut(s)	1458
BfuAI	ACCTGC	1 cut(s)	829
BfuI	GTATCC	1 cut(s)	590
BglII	AGATCT	1 cut(s)	1338
BisI	GCNGC	5 cut(s)	50, 313, 926, 1014, 1166
BlpI	GCTNAGC	1 cut(s)	1251
BlsI	GCNGC	5 cut(s)	51, 314, 927, 1015, 1167
BmcAI	AGTACT	1 cut(s)	951
Bme1390I	CCNGG	5 cut(s)	675, 1055, 1388, 1491, 1635
BmeT110I	CYCGRG	2 cut(s)	208, 616
BmgBI	CACGTC	1 cut(s)	100
BmgT120I	GGNCC	5 cut(s)	257, 440, 441, 1602, 1637
BmiI	GGNNCC	5 cut(s)	441, 442, 1148, 1477, 1603
BmrFI	CCNGG	5 cut(s)	675, 1055, 1388, 1491, 1635
BmrI	ACTGGG	1 cut(s)	625
BmsI	GCATC	5 cut(s)	408, 825, 923, 1283, 1432
BmuI	ACTGGG	1 cut(s)	625
BpiI	GAAGAC	1 cut(s)	339
BpmI	CTGGAG	2 cut(s)	560, 742
Bpu10I	CCTNAGC	1 cut(s)	1236
Bpu1102I	GCTNAGC	1 cut(s)	1251
Bpu14I	TTCGAA	1 cut(s)	1313
BpuMI	CCSGG	1 cut(s)	1635
BsaAI	YACGTR	2 cut(s)	79, 135
BsaBI	GATNNNNATC	1 cut(s)	422
BsaJI	CCNNGG	5 cut(s)	176, 444, 861, 1633, 1640
BsaXI	ACNNNNNCTCC	2 cut(s)	290, 320
Bsc4I	CCNNNNNNNGG	2 cut(s)	1577, 1641
Bse118I	RCCGGY	1 cut(s)	747
Bse1I	ACTGG	2 cut(s)	438, 631
Bse21I	CCTNAGG	1 cut(s)	1151
Bse3DI	GCAATG	1 cut(s)	1411
Bse8I	GATNNNNATC	1 cut(s)	422
BseBI	CCWGG	4 cut(s)	675, 1055, 1388, 1491
BseDI	CCNNGG	5 cut(s)	176, 444, 861, 1633, 1640
BseGI	GGATG	1 cut(s)	840
BseJI	GATNNNNATC	1 cut(s)	422
BseLI	CCNNNNNNNGG	2 cut(s)	1577, 1641
BseMI	GCAATG	1 cut(s)	1411
BseMII	CTCAG	4 cut(s)	132, 1227, 1242, 1613
BseNI	ACTGG	2 cut(s)	438, 631
BseRI	GAGGAG	2 cut(s)	557, 560
BseSI	GKGCMC	1 cut(s)	444
BseXI	GCAGC	3 cut(s)	937, 1025, 1177
BseYI	CCCAGC	1 cut(s)	158
BsgI	GTGCAG	2 cut(s)	493, 1602
Bsh1285I	CGRYCG	2 cut(s)	397, 752
BshFI	GGCC	7 cut(s)	49, 199, 259, 442, 747, 1604, 1638
BshNI	GGYRCC	1 cut(s)	1475
BsiEI	CGRYCG	2 cut(s)	397, 752
BsiHKAI	GWGCWC	3 cut(s)	362, 1132, 1628
BsiHKCI	CYCGRG	2 cut(s)	208, 616
BsiSI	CCGG	3 cut(s)	748, 1635, 1666
BslFI	GGGAC	2 cut(s)	612, 953
BslI	CCNNNNNNNGG	2 cut(s)	1577, 1641
BsmAI	GTCTC	3 cut(s)	424, 499, 1431
BsmBI	CGTCTC	2 cut(s)	499, 1431
BsmFI	GGGAC	2 cut(s)	612, 953
BsnI	GGCC	7 cut(s)	49, 199, 259, 442, 747, 1604, 1638
BsoBI	CYCGRG	2 cut(s)	208, 616
Bsp119I	TTCGAA	1 cut(s)	1313
Bsp120I	GGGCCC	1 cut(s)	440
Bsp1286I	GDGCHC	5 cut(s)	362, 444, 701, 1132, 1628
Bsp1407I	TGTACA	1 cut(s)	1194
Bsp143I	GATC	4 cut(s)	282, 394, 1338, 1611
Bsp1720I	GCTNAGC	1 cut(s)	1251
Bsp19I	CCATGG	1 cut(s)	176
BspACI	CCGC	7 cut(s)	50, 313, 377, 484, 805, 1321, 1479
BspANI	GGCC	7 cut(s)	49, 199, 259, 442, 747, 1604, 1638
BspCNI	CTCAG	4 cut(s)	131, 1228, 1243, 1614
BspLI	GGNNCC	5 cut(s)	441, 442, 1148, 1477, 1603
BspMI	ACCTGC	1 cut(s)	829
BspT104I	TTCGAA	1 cut(s)	1313
BspT107I	GGYRCC	1 cut(s)	1475
BsrBI	CCGCTC	1 cut(s)	1321
BsrDI	GCAATG	1 cut(s)	1411
BsrFI	RCCGGY	1 cut(s)	747
BsrGI	TGTACA	1 cut(s)	1194
BsrI	ACTGG	2 cut(s)	438, 631
BssAI	RCCGGY	1 cut(s)	747
BssECI	CCNNGG	5 cut(s)	176, 444, 861, 1633, 1640
BssMI	GATC	4 cut(s)	282, 394, 1338, 1611
BssT1I	CCWWGG	3 cut(s)	176, 444, 1640
Bst2UI	CCWGG	4 cut(s)	675, 1055, 1388, 1491
Bst4CI	ACNGT	6 cut(s)	319, 1194, 1201, 1210, 1459, 1561
BstAUI	TGTACA	1 cut(s)	1194
BstBAI	YACGTR	2 cut(s)	79, 135
BstBI	TTCGAA	1 cut(s)	1313
BstC8I	GCNNGC	1 cut(s)	1359
BstDEI	CTNAG	5 cut(s)	118, 1151, 1236, 1251, 1622
BstDSI	CCRYGG	2 cut(s)	176, 861
BstF5I	GGATG	1 cut(s)	840
BstHHI	GCGC	1 cut(s)	1098
BstKTI	GATC	4 cut(s)	285, 397, 1341, 1614
BstMAI	GTCTC	3 cut(s)	424, 499, 1431
BstMBI	GATC	4 cut(s)	282, 394, 1338, 1611
BstMCI	CGRYCG	2 cut(s)	397, 752
BstNI	CCWGG	4 cut(s)	675, 1055, 1388, 1491
BstNSI	RCATGY	2 cut(s)	738, 1485
BstSCI	CCNGG	5 cut(s)	673, 1053, 1386, 1489, 1633
BstSFI	CTRYAG	1 cut(s)	1458
BstSLI	GKGCMC	1 cut(s)	444
BstV1I	GCAGC	3 cut(s)	937, 1025, 1177
BstV2I	GAAGAC	1 cut(s)	339
BstX2I	RGATCY	1 cut(s)	1338
BstYI	RGATCY	1 cut(s)	1338
Bsu36I	CCTNAGG	1 cut(s)	1151
BsuI	GTATCC	1 cut(s)	590
BsuRI	GGCC	7 cut(s)	49, 199, 259, 442, 747, 1604, 1638
BtgI	CCRYGG	2 cut(s)	176, 861
BtrI	CACGTC	1 cut(s)	100
BtsCI	GGATG	1 cut(s)	840
BtsIMutI	CAGTG	3 cut(s)	1130, 1190, 1197
BveI	ACCTGC	1 cut(s)	829
Cac8I	GCNNGC	1 cut(s)	1359
CfoI	GCGC	1 cut(s)	1098
Cfr10I	RCCGGY	1 cut(s)	747
Cfr13I	GGNCC	5 cut(s)	257, 440, 441, 1602, 1637
CseI	GACGC	2 cut(s)	454, 478
Csp6I	GTAC	6 cut(s)	4, 136, 793, 950, 1195, 1371
CviAII	CATG	9 cut(s)	177, 271, 643, 735, 961, 1405, 1482, 1593, 1648
CviQI	GTAC	6 cut(s)	4, 136, 793, 950, 1195, 1371
DdeI	CTNAG	5 cut(s)	118, 1151, 1236, 1251, 1622
DpnI	GATC	4 cut(s)	284, 396, 1340, 1613
DpnII	GATC	4 cut(s)	282, 394, 1338, 1611
DraI	TTTAAA	1 cut(s)	1080
DrdI	GACNNNNNNGTC	1 cut(s)	965
DseDI	GACNNNNNNGTC	1 cut(s)	965
EaeI	YGGCCR	2 cut(s)	47, 197
EciI	GGCGGA	1 cut(s)	794
Ecl136II	GAGCTC	1 cut(s)	360
Eco130I	CCWWGG	3 cut(s)	176, 444, 1640
Eco24I	GRGCYC	3 cut(s)	362, 444, 701
Eco53kI	GAGCTC	1 cut(s)	360
Eco57I	CTGAAG	2 cut(s)	1011, 1154
Eco72I	CACGTG	1 cut(s)	79
Eco81I	CCTNAGG	1 cut(s)	1151
Eco88I	CYCGRG	2 cut(s)	208, 616
EcoICRI	GAGCTC	1 cut(s)	360
EcoO109I	RGGNCCY	1 cut(s)	440
EcoRII	CCWGG	4 cut(s)	673, 1053, 1386, 1489
EcoT14I	CCWWGG	3 cut(s)	176, 444, 1640
EcoT22I	ATGCAT	1 cut(s)	736
EcoT38I	GRGCYC	3 cut(s)	362, 444, 701
ErhI	CCWWGG	3 cut(s)	176, 444, 1640
Esp3I	CGTCTC	2 cut(s)	499, 1431
FaeI	CATG	9 cut(s)	180, 274, 646, 738, 964, 1408, 1485, 1596, 1651
FalI	AAGNNNNNCTT	2 cut(s)	1009, 1041
FaqI	GGGAC	2 cut(s)	612, 953
FatI	CATG	9 cut(s)	176, 270, 642, 734, 960, 1404, 1481, 1592, 1647
FauI	CCCGC	1 cut(s)	370
FauNDI	CATATG	1 cut(s)	1576
FbaI	TGATCA	2 cut(s)	282, 1611
FblI	GTMKAC	1 cut(s)	83
Fnu4HI	GCNGC	5 cut(s)	50, 313, 926, 1014, 1166
FokI	GGATG	1 cut(s)	847
FriOI	GRGCYC	3 cut(s)	362, 444, 701
Fsp4HI	GCNGC	5 cut(s)	50, 313, 926, 1014, 1166
FspBI	CTAG	1 cut(s)	798
FspI	TGCGCA	1 cut(s)	1097
GlaI	GCGC	1 cut(s)	1097
GluI	GCNGC	5 cut(s)	50, 313, 926, 1014, 1166
GsaI	CCCAGC	1 cut(s)	162
GsuI	CTGGAG	2 cut(s)	560, 742
HaeIII	GGCC	7 cut(s)	49, 199, 259, 442, 747, 1604, 1638
HapII	CCGG	3 cut(s)	748, 1635, 1666
HgaI	GACGC	2 cut(s)	454, 478
HhaI	GCGC	1 cut(s)	1098
Hin1II	CATG	9 cut(s)	180, 274, 646, 738, 964, 1408, 1485, 1596, 1651
Hin6I	GCGC	1 cut(s)	1096
HinP1I	GCGC	1 cut(s)	1096
HincII	GTYRAC	3 cut(s)	84, 336, 659
HindII	GTYRAC	3 cut(s)	84, 336, 659
HindIII	AAGCTT	3 cut(s)	1136, 1355, 1685
HpaII	CCGG	3 cut(s)	748, 1635, 1666
HphI	GGTGA	2 cut(s)	632, 853
Hpy166II	GTNNAC	7 cut(s)	84, 336, 659, 1042, 1197, 1305, 1487
Hpy188I	TCNGA	9 cut(s)	42, 287, 331, 370, 499, 577, 596, 1206, 1623
Hpy188III	TCNNGA	8 cut(s)	148, 208, 427, 798, 918, 1029, 1453, 1470
Hpy8I	GTNNAC	7 cut(s)	84, 336, 659, 1042, 1197, 1305, 1487
Hpy99I	CGWCG	7 cut(s)	255, 280, 343, 346, 370, 470, 494
HpyAV	CCTTC	6 cut(s)	124, 915, 1289, 1497, 1507, 1639
HpyCH4III	ACNGT	6 cut(s)	319, 1194, 1201, 1210, 1459, 1561
HpyCH4IV	ACGT	5 cut(s)	78, 99, 134, 278, 338
HpyF3I	CTNAG	5 cut(s)	118, 1151, 1236, 1251, 1622
HpySE526I	ACGT	5 cut(s)	78, 99, 134, 278, 338
Hsp92II	CATG	9 cut(s)	180, 274, 646, 738, 964, 1408, 1485, 1596, 1651
HspAI	GCGC	1 cut(s)	1096
Ksp22I	TGATCA	2 cut(s)	282, 1611
Kzo9I	GATC	4 cut(s)	282, 394, 1338, 1611
LmnI	GCTCC	6 cut(s)	77, 98, 723, 1127, 1156, 1283
Lsp1109I	GCAGC	3 cut(s)	937, 1025, 1177
LweI	GCATC	5 cut(s)	408, 825, 923, 1283, 1432
MaeI	CTAG	1 cut(s)	798
MaeII	ACGT	5 cut(s)	78, 99, 134, 278, 338
MaeIII	GTNAC	2 cut(s)	817, 1057
MalI	GATC	4 cut(s)	284, 396, 1340, 1613
MbiI	CCGCTC	1 cut(s)	1321
MboI	GATC	4 cut(s)	282, 394, 1338, 1611
MboII	GAAGA	5 cut(s)	274, 339, 342, 345, 843
MflI	RGATCY	1 cut(s)	1338
MhlI	GDGCHC	5 cut(s)	362, 444, 701, 1132, 1628
MlyI	GAGTC	6 cut(s)	341, 634, 791, 795, 1181, 1488
MmeI	TCCRAC	2 cut(s)	36, 348
MnlI	CCTC	7 cut(s)	535, 538, 1105, 1231, 1466, 1545, 1581
Mph1103I	ATGCAT	1 cut(s)	736
MroXI	GAANNNNTTC	1 cut(s)	1661
MseI	TTAA	2 cut(s)	987, 1079
MslI	CAYNNNNRTG	1 cut(s)	891
MspA1I	CMGCKG	1 cut(s)	52
MspI	CCGG	3 cut(s)	748, 1635, 1666
MspR9I	CCNGG	5 cut(s)	675, 1055, 1388, 1491, 1635
MvaI	CCWGG	4 cut(s)	675, 1055, 1388, 1491
NciI	CCSGG	1 cut(s)	1635
NcoI	CCATGG	1 cut(s)	176
NdeI	CATATG	1 cut(s)	1576
NdeII	GATC	4 cut(s)	282, 394, 1338, 1611
NlaIII	CATG	9 cut(s)	180, 274, 646, 738, 964, 1408, 1485, 1596, 1651
NlaIV	GGNNCC	5 cut(s)	441, 442, 1148, 1477, 1603
NmeAIII	GCCGAG	1 cut(s)	175
NmuCI	GTSAC	2 cut(s)	817, 1057
NsbI	TGCGCA	1 cut(s)	1097
NsiI	ATGCAT	1 cut(s)	736
NspI	RCATGY	2 cut(s)	738, 1485
NspV	TTCGAA	1 cut(s)	1313
PaqCI	CACCTGC	1 cut(s)	829
PcsI	WCGNNNNNNNCGW	2 cut(s)	362, 390
PdmI	GAANNNNTTC	1 cut(s)	1661
PfeI	GAWTC	5 cut(s)	529, 560, 591, 902, 1554
PkrI	GCNGC	5 cut(s)	51, 314, 927, 1015, 1167
Ple19I	CGATCG	1 cut(s)	397
PleI	GAGTC	6 cut(s)	340, 633, 790, 795, 1181, 1488
PmaCI	CACGTG	1 cut(s)	79
PmlI	CACGTG	1 cut(s)	79
PpsI	GAGTC	6 cut(s)	340, 633, 790, 795, 1181, 1488
Ppu21I	YACGTR	2 cut(s)	79, 135
PshBI	ATTAAT	1 cut(s)	987
Psp124BI	GAGCTC	1 cut(s)	362
Psp6I	CCWGG	4 cut(s)	673, 1053, 1386, 1489
PspCI	CACGTG	1 cut(s)	79
PspFI	CCCAGC	1 cut(s)	158
PspGI	CCWGG	4 cut(s)	673, 1053, 1386, 1489
PspN4I	GGNNCC	5 cut(s)	441, 442, 1148, 1477, 1603
PspOMI	GGGCCC	1 cut(s)	440
PspPI	GGNCC	5 cut(s)	257, 440, 441, 1602, 1637
PsuI	RGATCY	1 cut(s)	1338
PvuI	CGATCG	1 cut(s)	397
RsaI	GTAC	6 cut(s)	5, 137, 794, 951, 1196, 1372
RsaNI	GTAC	6 cut(s)	4, 136, 793, 950, 1195, 1371
RseI	CAYNNNNRTG	1 cut(s)	891
SacI	GAGCTC	1 cut(s)	362
SalI	GTCGAC	1 cut(s)	82
SaqAI	TTAA	2 cut(s)	987, 1079
SatI	GCNGC	5 cut(s)	50, 313, 926, 1014, 1166
Sau3AI	GATC	4 cut(s)	282, 394, 1338, 1611
Sau96I	GGNCC	5 cut(s)	257, 440, 441, 1602, 1637
ScaI	AGTACT	1 cut(s)	951
SchI	GAGTC	6 cut(s)	341, 634, 791, 795, 1181, 1488
ScrFI	CCNGG	5 cut(s)	675, 1055, 1388, 1491, 1635
SduI	GDGCHC	5 cut(s)	362, 444, 701, 1132, 1628
SfaNI	GCATC	5 cut(s)	408, 825, 923, 1283, 1432
SfcI	CTRYAG	1 cut(s)	1458
SfuI	TTCGAA	1 cut(s)	1313
SmiMI	CAYNNNNRTG	1 cut(s)	891
SsiI	CCGC	7 cut(s)	50, 313, 377, 484, 805, 1321, 1479
SspMI	CTAG	1 cut(s)	798
SstI	GAGCTC	1 cut(s)	362
StyD4I	CCNGG	5 cut(s)	673, 1053, 1386, 1489, 1633
StyI	CCWWGG	3 cut(s)	176, 444, 1640
TaaI	ACNGT	6 cut(s)	319, 1194, 1201, 1210, 1459, 1561
TaiI	ACGT	5 cut(s)	81, 102, 137, 281, 341
TaqI	TCGA	7 cut(s)	83, 323, 356, 393, 397, 917, 1313
TatI	WGTACW	4 cut(s)	3, 792, 949, 1194
TauI	GCSGC	2 cut(s)	52, 315
TfiI	GAWTC	5 cut(s)	529, 560, 591, 902, 1554
Tru1I	TTAA	2 cut(s)	987, 1079
Tru9I	TTAA	2 cut(s)	987, 1079
TscAI	CASTG	3 cut(s)	1137, 1197, 1204
TseFI	GTSAC	2 cut(s)	817, 1057
TseI	GCWGC	3 cut(s)	925, 1013, 1165
Tsp45I	GTSAC	2 cut(s)	817, 1057
TspDTI	ATGAA	2 cut(s)	977, 1260
TspGWI	ACGGA	2 cut(s)	354, 1539
TspRI	CASTG	3 cut(s)	1137, 1197, 1204
VspI	ATTAAT	1 cut(s)	987
XapI	RAATTY	3 cut(s)	21, 188, 767
XbaI	TCTAGA	1 cut(s)	797
XceI	RCATGY	2 cut(s)	738, 1485
XmiI	GTMKAC	1 cut(s)	83
XmnI	GAANNNNTTC	1 cut(s)	1661
XspI	CTAG	1 cut(s)	798
ZrmI	AGTACT	1 cut(s)	951
Zsp2I	ATGCAT	1 cut(s)	736

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.