Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0006143

Physical Location & Seq

Genomic Coordinates Reverse (-)

4807254 .. 4811189

Gene Structure 3936 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGACAGAAAGAAACTCCTTTTTTGTGGGGCGACCATGGCGGCACACATGCGGCCAAACCAAGCGGCCGAAAGCGAGACACGTCTTCTCCCGTTAAAGGTCGGTTTCCTTTTCTTCGCCTCGCCCCAATCTGTCCCTCTGTGTTCCAGTGTCTTTCTGTCTTCACTTTCTTCCCAACCAAAATCCTTAGACTTTCCCTTTTTTCTGTTGCTGAAAATGTCCCCGCAAACCAGAAGAATGACGTTCCCGAAGGTCGTCATTGAGAGAGACTCGGACTCCGAGCAGAGCTCATCCGAAGAAGACGAAGAACAACAAGAGGAAGATGAAGTGTTAGAGAGCGAAAACGAAGCCAAAGTCGAGGAGGTTTTGGACGAGAAGAAGAAAGGGAAATCACCCATTACTATTAGCCTCAAGAAAGTCTGCAAAGTGTGCAAGAAGCCGGGGCATGAAGCTGGATTCAAAGGGGCTACTTACATTGATTGCCCAATGAAGCCCTGCTTTCTTTGTAAAATGCCTGGCCACACTACAGTGGCATGCCCACACCGAGTGGCTACTGAGCATGGGGTTGTCCCAGCACCCCATAAAAATACCCGTAACGCGCTGGAGTATATGTTCGAACGCCAGATTAGACCTCGCGTTGCTCCGATCAAGACAGCATATGTGATCCCAGATCAAGTAAGTTGTGCGGTTATTAGATATCACAGTAGACGGGTGACTAGCTTAGAGTTCCATCCAACGAAGAATAACATCCTTTTATCTGGAGATAAGAAAGGACAACTTGGAGTATGGGATTTTGTCAAAGTACATGAAAAGATTGTTTATGGAAATGTACACTCTTGTATACTCAACAACATGAAGTTTAAACCTGCAAGTGATGATACAGTATATGGTGCATCCTCTGATGGAACCATTAGTTGCACTGATTTGGAGACTGGAATTTCACTATCTTTGATGAACCTTAACCCTGATGGATGGCAGGGGCCAAACAGTTGGAGAATGCTTTATGGAATGGATATCAATGCAGAGAAAGGTGTTGTGCTTGTTGCTGACAACTTTGGCTTTCTGTACATGGTTGATTCTCGCTCCAATGACAAAACTGGGAAGCCAATTTTGGTCCATAAGAAAGGTAGCAAAGTAGTTGGACTCCACTGCAATCCATTGCGGCCTGACCTTCTACTGAGTTGTGGAAATGATCACTTTGCTCGTATATGGGACATTCGTCGAATTGAAGCTGGTTCTTCCATATACGACCTTGCACACAGCCGTGTTGTTAACTCTGCATATTTTTCTCCGATGTCTGGCAGCAAAATTCTTAGCACTTCACAGGATAACCGTATTCGTATATGGGACTCTATATTTGGCAATATGGATACCCCAAGCCGAGAGATTGTACACAGTCATGATTTCAATCGTCATCTGACTCCTTTCAAAGCTGAATGGGATCCAAAGGACTCGTCAGAGTCCCTTGCAGTTATTGGTCGTTACATAAGTGAAAACTATAATGGAGCTGCCCTCCATCCCATTGATTTCATAGACATCAGCACAGGACAACTAGTTGCTGAGGTCATGGATCCAAACATCACTACAATCAGTCCAGTGAACAAGCTACATCCGCGTGATGATGTTTTGGCATCAGGCAGTTCAAGGTCACTTTTCATTTGGCGGCCGAAGGAAAAGTGCGAGCCTGTGGAACCAAAGGATGAACGGAAGATTATTGTCTGTTCCGGAGCTGAGAAGAAGAGGAACCGGAAGTTTGGGGATGAAAACGATGATTCTGATGATGACAAGTTCCCCCCGAAGGGCAAGAATTTAAAGTCCAAAAAATCTGCCTCGAAATCAAGTCAATATACTCTCAAGGTCAAACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0031461 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03420 ko04115 ko04120 ko05161 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03420 map04115 map04120 map05161 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

WD40

Protein Analysis

623

Amino Acids

69.73

Weight (kDa)

8.62

Isoelectric Point (pI)

45.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	344 - 454	4.5e-07	CDC20/Fizzy WD40 domain
Beta-prop_EIPR1	PF23609	345 - 449	4.1e-07	EIPR1 beta-propeller
Beta-prop_THOC3	PF25174	377 - 451	1.2e-07	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	389 - 454	9.5e-08	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58760 AT5G58760
fragaria_vesca	FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500
malus_domestica	MD11G1075200.v1.1
prunus_persica	Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1
pyrus_communis	pycom03g05740 pycom11g06250
rosa_chinensis	RchiOBHm_Chr5g0069361
rosa_laevigata	RLG00000036049
rosa_multiflora	Rmu_sc0002658.1_g000007
rosa_roxburghii	Rroxscaffold_1G00011560
rosa_rugosa	Rorug05G0397300
rosa_samantha	Rh5AG453900 Rh5BG472900 Rh5CG495500 Rh5DG485300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	874
AccI	GTMKAC	2 cut(s)	706, 841
AccII	CGCG	3 cut(s)	599, 636, 1615
AccIII	TCCGGA	1 cut(s)	1724
AciI	CCGC	8 cut(s)	41, 52, 65, 224, 686, 1162, 1613, 1663
AclWI	GGATC	5 cut(s)	658, 1436, 1449, 1565, 1578
AcoI	YGGCCR	4 cut(s)	53, 66, 517, 1664
AcsI	RAATTY	3 cut(s)	936, 1308, 1807
AdeI	CACNNNGTG	1 cut(s)	547
AfaI	GTAC	4 cut(s)	804, 831, 1067, 1392
AfiI	CCNNNNNNNGG	4 cut(s)	97, 1298, 1798, 1799
AflIII	ACRYGT	1 cut(s)	80
AgsI	TTSAA	5 cut(s)	460, 1229, 1408, 1429, 1644
AhlI	ACTAGT	1 cut(s)	1552
AjiI	CACGTC	1 cut(s)	83
AjnI	CCWGG	1 cut(s)	514
AjuI	GAANNNNNNNTTGG	2 cut(s)	1094, 1126
AleI	CACNNNNGTG	2 cut(s)	527, 1263
AloI	GAACNNNNNNTCC	2 cut(s)	596, 628
AluBI	AGCT	8 cut(s)	288, 452, 720, 1232, 1433, 1508, 1606, 1730
AluI	AGCT	8 cut(s)	288, 452, 720, 1232, 1433, 1508, 1606, 1730
Alw21I	GWGCWC	1 cut(s)	290
Alw26I	GTCTC	3 cut(s)	71, 261, 923
AlwI	GGATC	5 cut(s)	658, 1436, 1449, 1565, 1578
Aor13HI	TCCGGA	1 cut(s)	1724
AoxI	GGCC	6 cut(s)	53, 66, 517, 980, 1163, 1664
ApeKI	GCWGC	2 cut(s)	1302, 1508
ApoI	RAATTY	3 cut(s)	936, 1308, 1807
ArsI	GACNNNNNNTTYG	6 cut(s)	339, 371, 1340, 1372, 1439, 1471
AspLEI	GCGC	1 cut(s)	601
AspS9I	GGNCC	2 cut(s)	980, 1114
AsuC2I	CCSGG	1 cut(s)	441
AsuHPI	GGTGA	2 cut(s)	384, 724
AsuII	TTCGAA	1 cut(s)	615
AvaII	GGWCC	1 cut(s)	1114
BalI	TGGCCA	1 cut(s)	519
BamHI	GGATCC	2 cut(s)	1441, 1570
BanII	GRGCYC	1 cut(s)	290
BbsI	GAAGAC	3 cut(s)	77, 153, 306
Bbv12I	GWGCWC	1 cut(s)	290
BbvCI	CCTCAGC	1 cut(s)	1560
BbvI	GCAGC	2 cut(s)	1314, 1495
BccI	CCATC	5 cut(s)	738, 896, 962, 966, 1524
BceAI	ACGGC	1 cut(s)	1248
BciT130I	CCWGG	1 cut(s)	516
BciVI	GTATCC	1 cut(s)	1363
BclI	TGATCA	1 cut(s)	1192
BcnI	CCSGG	1 cut(s)	441
BcoDI	GTCTC	3 cut(s)	71, 261, 923
BcuI	ACTAGT	1 cut(s)	1552
BfaI	CTAG	2 cut(s)	717, 1553
BfmI	CTRYAG	1 cut(s)	525
BfuAI	ACCTGC	1 cut(s)	874
BfuI	GTATCC	1 cut(s)	1363
BisI	GCNGC	7 cut(s)	42, 53, 66, 1163, 1303, 1509, 1664
BlsI	GCNGC	7 cut(s)	43, 54, 67, 1164, 1304, 1510, 1665
Bme1390I	CCNGG	2 cut(s)	441, 516
Bme18I	GGWCC	1 cut(s)	1114
BmgBI	CACGTC	1 cut(s)	83
BmgT120I	GGNCC	2 cut(s)	980, 1114
BmiI	GGNNCC	6 cut(s)	907, 981, 1443, 1572, 1692, 1745
BmrFI	CCNGG	2 cut(s)	441, 516
BmrI	ACTGGG	1 cut(s)	1107
BmsI	GCATC	2 cut(s)	902, 1640
BmuI	ACTGGG	1 cut(s)	1107
BoxI	GACNNNNGTC	1 cut(s)	1218
BpiI	GAAGAC	3 cut(s)	77, 153, 306
BplI	GAGNNNNNCTC	6 cut(s)	254, 286, 272, 304, 1497, 1529
BpmI	CTGGAG	2 cut(s)	623, 780
Bpu10I	CCTNAGC	1 cut(s)	1560
Bpu14I	TTCGAA	1 cut(s)	615
BpuEI	CTTGAG	2 cut(s)	395, 1838
BpuMI	CCSGG	1 cut(s)	441
BsaBI	GATNNNNATC	1 cut(s)	1407
BsaJI	CCNNGG	2 cut(s)	36, 440
BsaWI	WCCGGW	2 cut(s)	1724, 1746
BsaXI	ACNNNNNCTCC	6 cut(s)	72, 102, 260, 290, 596, 626
Bsc4I	CCNNNNNNNGG	4 cut(s)	97, 1298, 1798, 1799
Bse1I	ACTGG	4 cut(s)	147, 937, 1102, 1595
Bse3DI	GCAATG	1 cut(s)	1157
Bse8I	GATNNNNATC	1 cut(s)	1407
BseAI	TCCGGA	1 cut(s)	1724
BseBI	CCWGG	1 cut(s)	516
BseDI	CCNNGG	2 cut(s)	36, 440
BseGI	GGATG	9 cut(s)	290, 730, 747, 893, 977, 1516, 1609, 1705, 1765
BseJI	GATNNNNATC	1 cut(s)	1407
BseLI	CCNNNNNNNGG	4 cut(s)	97, 1298, 1798, 1799
BseMI	GCAATG	1 cut(s)	1157
BseMII	CTCAG	4 cut(s)	546, 1169, 1551, 1722
BseNI	ACTGG	4 cut(s)	147, 937, 1102, 1595
BseRI	GAGGAG	1 cut(s)	374
BseX3I	CGGCCG	2 cut(s)	66, 1664
BseXI	GCAGC	2 cut(s)	1314, 1495
BseYI	CCCAGC	1 cut(s)	571
Bsh1236I	CGCG	3 cut(s)	599, 636, 1615
Bsh1285I	CGRYCG	2 cut(s)	69, 1667
BshFI	GGCC	6 cut(s)	55, 68, 519, 982, 1165, 1666
BsiEI	CGRYCG	2 cut(s)	69, 1667
BsiHKAI	GWGCWC	1 cut(s)	290
BsiSI	CCGG	3 cut(s)	440, 1725, 1747
BslFI	GGGAC	6 cut(s)	119, 205, 554, 1226, 1361, 1447
BslI	CCNNNNNNNGG	4 cut(s)	97, 1298, 1798, 1799
BsmAI	GTCTC	3 cut(s)	71, 261, 923
BsmFI	GGGAC	6 cut(s)	119, 205, 554, 1226, 1361, 1447
BsmI	GAATGC	1 cut(s)	1002
BsnI	GGCC	6 cut(s)	55, 68, 519, 982, 1165, 1666
Bsp119I	TTCGAA	1 cut(s)	615
Bsp1286I	GDGCHC	1 cut(s)	290
Bsp13I	TCCGGA	1 cut(s)	1724
Bsp1407I	TGTACA	3 cut(s)	829, 1065, 1390
Bsp143I	GATC	6 cut(s)	645, 663, 670, 1192, 1441, 1570
Bsp19I	CCATGG	1 cut(s)	36
BspACI	CCGC	8 cut(s)	41, 52, 65, 224, 686, 1162, 1613, 1663
BspANI	GGCC	6 cut(s)	55, 68, 519, 982, 1165, 1666
BspCNI	CTCAG	4 cut(s)	547, 1170, 1552, 1723
BspEI	TCCGGA	1 cut(s)	1724
BspFNI	CGCG	3 cut(s)	599, 636, 1615
BspHI	TCATGA	1 cut(s)	1399
BspLI	GGNNCC	6 cut(s)	907, 981, 1443, 1572, 1692, 1745
BspMI	ACCTGC	1 cut(s)	874
BspPI	GGATC	5 cut(s)	658, 1436, 1449, 1565, 1578
BspT104I	TTCGAA	1 cut(s)	615
BsrDI	GCAATG	1 cut(s)	1157
BsrGI	TGTACA	3 cut(s)	829, 1065, 1390
BsrI	ACTGG	4 cut(s)	147, 937, 1102, 1595
BssECI	CCNNGG	2 cut(s)	36, 440
BssMI	GATC	6 cut(s)	645, 663, 670, 1192, 1441, 1570
BssNAI	GTATAC	1 cut(s)	842
BssT1I	CCWWGG	1 cut(s)	36
Bst1107I	GTATAC	1 cut(s)	842
Bst2UI	CCWGG	1 cut(s)	516
Bst4CI	ACNGT	6 cut(s)	529, 704, 883, 989, 1334, 1397
Bst6I	CTCTTC	1 cut(s)	1733
BstAPI	GCANNNNNTGC	1 cut(s)	429
BstAUI	TGTACA	3 cut(s)	829, 1065, 1390
BstBI	TTCGAA	1 cut(s)	615
BstC8I	GCNNGC	2 cut(s)	535, 1682
BstDEI	CTNAG	7 cut(s)	187, 555, 721, 1178, 1313, 1560, 1731
BstDSI	CCRYGG	1 cut(s)	36
BstF5I	GGATG	9 cut(s)	290, 730, 747, 893, 977, 1516, 1609, 1705, 1765
BstFNI	CGCG	3 cut(s)	599, 636, 1615
BstHHI	GCGC	1 cut(s)	601
BstKTI	GATC	6 cut(s)	648, 666, 673, 1195, 1444, 1573
BstMAI	GTCTC	3 cut(s)	71, 261, 923
BstMBI	GATC	6 cut(s)	645, 663, 670, 1192, 1441, 1570
BstMCI	CGRYCG	2 cut(s)	69, 1667
BstMWI	GCNNNNNNNGC	3 cut(s)	38, 429, 1612
BstNI	CCWGG	1 cut(s)	516
BstNSI	RCATGY	2 cut(s)	52, 537
BstPAI	GACNNNNGTC	1 cut(s)	1218
BstSCI	CCNGG	2 cut(s)	439, 514
BstSFI	CTRYAG	1 cut(s)	525
BstUI	CGCG	3 cut(s)	599, 636, 1615
BstV1I	GCAGC	2 cut(s)	1314, 1495
BstV2I	GAAGAC	3 cut(s)	77, 153, 306
BstX2I	RGATCY	2 cut(s)	1441, 1570
BstXI	CCANNNNNNTGG	1 cut(s)	990
BstYI	RGATCY	2 cut(s)	1441, 1570
BstZ17I	GTATAC	1 cut(s)	842
BstZI	CGGCCG	2 cut(s)	66, 1664
BsuI	GTATCC	1 cut(s)	1363
BsuRI	GGCC	6 cut(s)	55, 68, 519, 982, 1165, 1666
BtgI	CCRYGG	1 cut(s)	36
BtrI	CACGTC	1 cut(s)	83
BtsCI	GGATG	9 cut(s)	290, 730, 747, 893, 977, 1516, 1609, 1705, 1765
BtsI	GCAGTG	1 cut(s)	1147
BtsIMutI	CAGTG	5 cut(s)	154, 534, 918, 1147, 1602
BveI	ACCTGC	1 cut(s)	874
Cac8I	GCNNGC	2 cut(s)	535, 1682
CciI	TCATGA	1 cut(s)	1399
CfoI	GCGC	1 cut(s)	601
Cfr13I	GGNCC	2 cut(s)	980, 1114
Csp6I	GTAC	4 cut(s)	803, 830, 1066, 1391
CviQI	GTAC	4 cut(s)	803, 830, 1066, 1391
DdeI	CTNAG	7 cut(s)	187, 555, 721, 1178, 1313, 1560, 1731
DpnI	GATC	6 cut(s)	647, 665, 672, 1194, 1443, 1572
DpnII	GATC	6 cut(s)	645, 663, 670, 1192, 1441, 1570
DraI	TTTAAA	2 cut(s)	862, 1812
DraIII	CACNNNGTG	1 cut(s)	547
EaeI	YGGCCR	4 cut(s)	53, 66, 517, 1664
EagI	CGGCCG	2 cut(s)	66, 1664
Eam1104I	CTCTTC	1 cut(s)	1733
EarI	CTCTTC	1 cut(s)	1733
Ecl136II	GAGCTC	1 cut(s)	288
EclXI	CGGCCG	2 cut(s)	66, 1664
Eco130I	CCWWGG	1 cut(s)	36
Eco24I	GRGCYC	1 cut(s)	290
Eco32I	GATATC	2 cut(s)	698, 1015
Eco47I	GGWCC	1 cut(s)	1114
Eco52I	CGGCCG	2 cut(s)	66, 1664
Eco53kI	GAGCTC	1 cut(s)	288
EcoICRI	GAGCTC	1 cut(s)	288
EcoRII	CCWGG	1 cut(s)	514
EcoRV	GATATC	2 cut(s)	698, 1015
EcoT14I	CCWWGG	1 cut(s)	36
EcoT38I	GRGCYC	1 cut(s)	290
ErhI	CCWWGG	1 cut(s)	36
FalI	AAGNNNNNCTT	4 cut(s)	482, 514, 762, 794
FaqI	GGGAC	6 cut(s)	119, 205, 554, 1226, 1361, 1447
FauI	CCCGC	1 cut(s)	231
FauNDI	CATATG	1 cut(s)	658
FbaI	TGATCA	1 cut(s)	1192
FblI	GTMKAC	2 cut(s)	706, 841
Fnu4HI	GCNGC	7 cut(s)	42, 53, 66, 1163, 1303, 1509, 1664
FokI	GGATG	9 cut(s)	277, 717, 734, 880, 984, 1503, 1596, 1712, 1772
FriOI	GRGCYC	1 cut(s)	290
Fsp4HI	GCNGC	7 cut(s)	42, 53, 66, 1163, 1303, 1509, 1664
FspBI	CTAG	2 cut(s)	717, 1553
GlaI	GCGC	1 cut(s)	600
GluI	GCNGC	7 cut(s)	42, 53, 66, 1163, 1303, 1509, 1664
GsaI	CCCAGC	1 cut(s)	575
GsuI	CTGGAG	2 cut(s)	623, 780
HaeIII	GGCC	6 cut(s)	55, 68, 519, 982, 1165, 1666
HapII	CCGG	3 cut(s)	440, 1725, 1747
HhaI	GCGC	1 cut(s)	601
Hin6I	GCGC	1 cut(s)	599
HinP1I	GCGC	1 cut(s)	599
HincII	GTYRAC	1 cut(s)	1273
HindII	GTYRAC	1 cut(s)	1273
HpaI	GTTAAC	1 cut(s)	1273
HpaII	CCGG	3 cut(s)	440, 1725, 1747
HphI	GGTGA	2 cut(s)	384, 724
Hpy166II	GTNNAC	6 cut(s)	707, 832, 842, 1273, 1393, 1600
Hpy188I	TCNGA	9 cut(s)	274, 280, 295, 645, 901, 1293, 1419, 1459, 1777
Hpy188III	TCNNGA	6 cut(s)	247, 412, 649, 759, 1400, 1725
Hpy8I	GTNNAC	6 cut(s)	707, 832, 842, 1273, 1393, 1600
Hpy99I	CGWCG	1 cut(s)	1224
HpyAV	CCTTC	4 cut(s)	244, 1181, 1663, 1792
HpyCH4III	ACNGT	6 cut(s)	529, 704, 883, 989, 1334, 1397
HpyCH4IV	ACGT	2 cut(s)	82, 242
HpyF10VI	GCNNNNNNNGC	3 cut(s)	38, 429, 1612
HpyF3I	CTNAG	7 cut(s)	187, 555, 721, 1178, 1313, 1560, 1731
HpySE526I	ACGT	2 cut(s)	82, 242
HspAI	GCGC	1 cut(s)	599
Kpn2I	TCCGGA	1 cut(s)	1724
Ksp22I	TGATCA	1 cut(s)	1192
KspAI	GTTAAC	1 cut(s)	1273
Kzo9I	GATC	6 cut(s)	645, 663, 670, 1192, 1441, 1570
LmnI	GCTCC	4 cut(s)	646, 1088, 1505, 1727
Lsp1109I	GCAGC	2 cut(s)	1314, 1495
LweI	GCATC	2 cut(s)	902, 1640
MaeI	CTAG	2 cut(s)	717, 1553
MaeII	ACGT	2 cut(s)	82, 242
MaeIII	GTNAC	4 cut(s)	593, 712, 1481, 1647
MalI	GATC	6 cut(s)	647, 665, 672, 1194, 1443, 1572
MboI	GATC	6 cut(s)	645, 663, 670, 1192, 1441, 1570
MflI	RGATCY	2 cut(s)	1441, 1570
MhlI	GDGCHC	1 cut(s)	290
MlsI	TGGCCA	1 cut(s)	519
MluCI	AATT	5 cut(s)	936, 1107, 1224, 1308, 1807
MluNI	TGGCCA	1 cut(s)	519
MlyI	GAGTC	7 cut(s)	263, 269, 1137, 1343, 1414, 1445, 1469
MmeI	TCCRAC	3 cut(s)	758, 971, 1120
Mox20I	TGGCCA	1 cut(s)	519
MroI	TCCGGA	1 cut(s)	1724
MscI	TGGCCA	1 cut(s)	519
MseI	TTAA	5 cut(s)	95, 861, 960, 1272, 1811
MslI	CAYNNNNRTG	4 cut(s)	527, 1263, 1398, 1614
Msp20I	TGGCCA	1 cut(s)	519
MspI	CCGG	3 cut(s)	440, 1725, 1747
MspR9I	CCNGG	2 cut(s)	441, 516
MssI	GTTTAAAC	1 cut(s)	862
Mva1269I	GAATGC	1 cut(s)	1002
MvaI	CCWGG	1 cut(s)	516
MvnI	CGCG	3 cut(s)	599, 636, 1615
MwoI	GCNNNNNNNGC	3 cut(s)	38, 429, 1612
NciI	CCSGG	1 cut(s)	441
NcoI	CCATGG	1 cut(s)	36
NdeI	CATATG	1 cut(s)	658
NdeII	GATC	6 cut(s)	645, 663, 670, 1192, 1441, 1570
NlaIV	GGNNCC	6 cut(s)	907, 981, 1443, 1572, 1692, 1745
NmeAIII	GCCGAG	1 cut(s)	1406
NmuCI	GTSAC	2 cut(s)	712, 1647
NspI	RCATGY	2 cut(s)	52, 537
NspV	TTCGAA	1 cut(s)	615
OliI	CACNNNNGTG	2 cut(s)	527, 1263
PaeI	GCATGC	1 cut(s)	537
PagI	TCATGA	1 cut(s)	1399
PctI	GAATGC	1 cut(s)	1002
PfeI	GAWTC	3 cut(s)	456, 1076, 1772
PkrI	GCNGC	7 cut(s)	43, 54, 67, 1164, 1304, 1510, 1665
PleI	GAGTC	7 cut(s)	263, 269, 1137, 1343, 1414, 1445, 1468
PmeI	GTTTAAAC	1 cut(s)	862
PpsI	GAGTC	7 cut(s)	263, 269, 1137, 1343, 1414, 1445, 1468
PshAI	GACNNNNGTC	1 cut(s)	1218
Psp124BI	GAGCTC	1 cut(s)	290
Psp6I	CCWGG	1 cut(s)	514
PspFI	CCCAGC	1 cut(s)	571
PspGI	CCWGG	1 cut(s)	514
PspN4I	GGNNCC	6 cut(s)	907, 981, 1443, 1572, 1692, 1745
PspPI	GGNCC	2 cut(s)	980, 1114
PsuI	RGATCY	2 cut(s)	1441, 1570
RsaI	GTAC	4 cut(s)	804, 831, 1067, 1392
RsaNI	GTAC	4 cut(s)	803, 830, 1066, 1391
RseI	CAYNNNNRTG	4 cut(s)	527, 1263, 1398, 1614
SacI	GAGCTC	1 cut(s)	290
SaqAI	TTAA	5 cut(s)	95, 861, 960, 1272, 1811
SatI	GCNGC	7 cut(s)	42, 53, 66, 1163, 1303, 1509, 1664
Sau3AI	GATC	6 cut(s)	645, 663, 670, 1192, 1441, 1570
Sau96I	GGNCC	2 cut(s)	980, 1114
SchI	GAGTC	7 cut(s)	263, 269, 1137, 1343, 1414, 1445, 1469
ScrFI	CCNGG	2 cut(s)	441, 516
SduI	GDGCHC	1 cut(s)	290
SfaNI	GCATC	2 cut(s)	902, 1640
SfcI	CTRYAG	1 cut(s)	525
SfuI	TTCGAA	1 cut(s)	615
SinI	GGWCC	1 cut(s)	1114
SmiMI	CAYNNNNRTG	4 cut(s)	527, 1263, 1398, 1614
SmlI	CTYRAG	2 cut(s)	410, 1853
SmoI	CTYRAG	2 cut(s)	410, 1853
SpeI	ACTAGT	1 cut(s)	1552
SphI	GCATGC	1 cut(s)	537
Sse9I	AATT	5 cut(s)	936, 1107, 1224, 1308, 1807
SsiI	CCGC	8 cut(s)	41, 52, 65, 224, 686, 1162, 1613, 1663
SspMI	CTAG	2 cut(s)	717, 1553
SstI	GAGCTC	1 cut(s)	290
StyD4I	CCNGG	2 cut(s)	439, 514
StyI	CCWWGG	1 cut(s)	36
TaaI	ACNGT	6 cut(s)	529, 704, 883, 989, 1334, 1397
TaiI	ACGT	2 cut(s)	85, 245
TaqI	TCGA	4 cut(s)	357, 615, 1222, 1832
TasI	AATT	5 cut(s)	936, 1107, 1224, 1308, 1807
TatI	WGTACW	4 cut(s)	802, 829, 1065, 1390
TauI	GCSGC	5 cut(s)	44, 55, 68, 1165, 1666
TfiI	GAWTC	3 cut(s)	456, 1076, 1772
Tru1I	TTAA	5 cut(s)	95, 861, 960, 1272, 1811
Tru9I	TTAA	5 cut(s)	95, 861, 960, 1272, 1811
TscAI	CASTG	5 cut(s)	154, 534, 925, 1154, 1602
TseFI	GTSAC	2 cut(s)	712, 1647
TseI	GCWGC	2 cut(s)	1302, 1508
Tsp45I	GTSAC	2 cut(s)	712, 1647
TspGWI	ACGGA	1 cut(s)	1720
TspRI	CASTG	5 cut(s)	154, 534, 925, 1154, 1602
VpaK11BI	GGWCC	1 cut(s)	1114
XapI	RAATTY	3 cut(s)	936, 1308, 1807
XceI	RCATGY	2 cut(s)	52, 537
XmiI	GTMKAC	2 cut(s)	706, 841
XspI	CTAG	2 cut(s)	717, 1553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.