pycom11g11440

Protein of unknown function (DUF707)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0002168
Physical Location & Seq
Reverse (-)
10062798 .. 10067454
4657 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1164 bp
ATGGGCACTGTACACCGCAGCGGGGTTAAGAAATCAAATGACAGTGCCAGGCTTATTTTCACTACAAGTTTGGGAGTTGTCTTTGGATTTTTCCTTGGTGTATCATTACCGTCAGTTTCTTTAAACAAGATTAGGTTACCTTCAAGCCTTATAACATCTCTTGATGTAGCCTTCACCCAATTGCGTAGACCTAATACTCCCCCTTCAAGCAAGAGTCTTGAAGATGAAGGATCAGAGGGTGTCCCTAAGATATATGTTCCAACAAACCCGCGTGGTGCGGAAACACTACCTCCAGGAATTATTGTTCCTAAATCTGATCTTTATATCCGGAGATTGTGGGGTGAACCCGGTGAGGATCTGAAAGTAACGCCAAAGTATTTGGTATCATTTACTGTTGGTATAAATCAGAAAAAGAATATTGATGCAGCGGTTAAAAAGTTCTCCGAGAACTTCACAATATTGCTCTTTCACTATGATGGCCGGACTAGTGAGTGGGAGGAGTTTGAGTGGTCAAAGAGGGCAATTCATGTTAGTGTGAAGAGGCAAGCAAAATGGTGGTACGCAAAGAGATTTTTGCATCCTGATATCGTAGCAGCTTATGAATATATTTTCATTTGGGATGAAGACTTGGGAGTAGAACATTTCAATGGAGAGAAATATATACAGTTGGTCAAGAAATATGGTTTGGAGATCTCTCAACCTGGTCTTGAGCCCAATAATGGACTGACGTGGGAGATGACAAAGAGGAGAGGTGACAGAGAAGTTCACAAGGATACTGAAGAGAAACCAGGCTGGTGTAGTGACCCACATCTTCCTCCTTGTGCTGCATTTGTGGAAATAATGGCCCCTGTCTTTTCTCGGGAAGCTTGGCGTTGTGCATGGCATTTGATTCAGAATGATTTAGTGCATGGATGGGGATTGGATTTTGCTCTCAGAAGATGTGTAGAGCCTGCACATGAAAAGATTGGTGTAGTTGATTCACAGTGGATTATTCATCAAGTAATTCCTTCTCTTGGGGGCCAGGGAAATCAGGAGGATGGAAAAGCTCCATGGGAAGGGGTACGTGATATGGTGAGAACAAGATGCAAAAATGAGTGGGCTGAATTTCAGGCTCGCCTCCTTGGCGCAGACCAGGCATACCTTGCTCAGAAAGGAAGGGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF707

Protein Analysis

388

Amino Acids

43.98

Weight (kDa)

8.16

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF707 PF05212 88 - 377 6e-138 Protein of unknown function (DUF707)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 152
AccI GTMKAC 1 cut(s) 187
AccII CGCG 1 cut(s) 271
AccIII TCCGGA 1 cut(s) 327
AciI CCGC 5 cut(s) 16, 21, 269, 278, 428
AclWI GGATC 2 cut(s) 238, 363
AcoI YGGCCR 1 cut(s) 478
AcsI RAATTY 1 cut(s) 1103
AcuI CTGAAG 1 cut(s) 798
AfaI GTAC 3 cut(s) 12, 560, 1062
AfiI CCNNNNNNNGG 4 cut(s) 22, 719, 1013, 1055
AgsI TTSAA 4 cut(s) 144, 207, 221, 646
AhlI ACTAGT 1 cut(s) 485
AjiI CACGTC 1 cut(s) 729
AjnI CCWGG 6 cut(s) 47, 292, 700, 787, 1020, 1131
AjuI GAANNNNNNNTTGG 2 cut(s) 668, 700
AloI GAACNNNNNNTCC 2 cut(s) 288, 320
AluBI AGCT 3 cut(s) 596, 866, 1046
AluI AGCT 3 cut(s) 596, 866, 1046
AlwI GGATC 2 cut(s) 238, 363
Ama87I CYCGRG 1 cut(s) 858
Aor13HI TCCGGA 1 cut(s) 327
AoxI GGCC 3 cut(s) 478, 843, 1018
ApeKI GCWGC 4 cut(s) 18, 425, 593, 824
ApoI RAATTY 1 cut(s) 1103
AspLEI GCGC 1 cut(s) 1127
AspS9I GGNCC 2 cut(s) 844, 1018
AsuC2I CCSGG 1 cut(s) 348
AsuHPI GGTGA 5 cut(s) 166, 353, 362, 764, 1084
AvaI CYCGRG 1 cut(s) 858
BaeGI GKGCMC 1 cut(s) 8
BanII GRGCYC 1 cut(s) 714
BbsI GAAGAC 1 cut(s) 630
BbvI GCAGC 4 cut(s) 30, 437, 605, 811
BccI CCATC 3 cut(s) 470, 906, 1031
BciT130I CCWGG 6 cut(s) 49, 294, 702, 789, 1022, 1133
BciVI GTATCC 1 cut(s) 766
BcnI CCSGG 1 cut(s) 348
BcuI ACTAGT 1 cut(s) 485
BfaI CTAG 1 cut(s) 486
BfuI GTATCC 1 cut(s) 766
BglI GCCNNNNNGGC 1 cut(s) 1122
BglII AGATCT 1 cut(s) 690
BisI GCNGC 4 cut(s) 19, 426, 594, 825
BlsI GCNGC 4 cut(s) 20, 427, 595, 826
Bme1390I CCNGG 7 cut(s) 49, 294, 348, 702, 789, 1022, 1133
BmeT110I CYCGRG 1 cut(s) 858
BmgBI CACGTC 1 cut(s) 729
BmgT120I GGNCC 2 cut(s) 844, 1018
BmiI GGNNCC 2 cut(s) 846, 1019
BmrFI CCNGG 7 cut(s) 49, 294, 348, 702, 789, 1022, 1133
BmsI GCATC 3 cut(s) 412, 586, 1073
BpiI GAAGAC 1 cut(s) 630
BpmI CTGGAG 1 cut(s) 276
BpuEI CTTGAG 1 cut(s) 728
BpuMI CCSGG 1 cut(s) 348
BsaAI YACGTR 1 cut(s) 1064
BsaJI CCNNGG 4 cut(s) 94, 1021, 1049, 1120
BsaWI WCCGGW 1 cut(s) 327
BsaXI ACNNNNNCTCC 4 cut(s) 274, 304, 491, 521
Bsc4I CCNNNNNNNGG 4 cut(s) 22, 719, 1013, 1055
BseAI TCCGGA 1 cut(s) 327
BseBI CCWGG 6 cut(s) 49, 294, 702, 789, 1022, 1133
BseDI CCNNGG 4 cut(s) 94, 1021, 1049, 1120
BseGI GGATG 4 cut(s) 577, 625, 917, 1042
BseLI CCNNNNNNNGG 4 cut(s) 22, 719, 1013, 1055
BseMII CTCAG 2 cut(s) 946, 1160
BseRI GAGGAG 2 cut(s) 512, 760
BseSI GKGCMC 1 cut(s) 8
BseXI GCAGC 4 cut(s) 30, 437, 605, 811
BsgI GTGCAG 1 cut(s) 936
Bsh1236I CGCG 1 cut(s) 271
BshFI GGCC 3 cut(s) 480, 845, 1020
BsiHKCI CYCGRG 1 cut(s) 858
BsiSI CCGG 3 cut(s) 328, 348, 481
BslFI GGGAC 1 cut(s) 227
BslI CCNNNNNNNGG 4 cut(s) 22, 719, 1013, 1055
BsmFI GGGAC 1 cut(s) 227
BsnI GGCC 3 cut(s) 480, 845, 1020
BsoBI CYCGRG 1 cut(s) 858
Bsp1286I GDGCHC 2 cut(s) 8, 714
Bsp13I TCCGGA 1 cut(s) 327
Bsp1407I TGTACA 1 cut(s) 10
Bsp143I GATC 4 cut(s) 230, 316, 355, 690
Bsp19I CCATGG 1 cut(s) 1049
BspACI CCGC 5 cut(s) 16, 21, 269, 278, 428
BspANI GGCC 3 cut(s) 480, 845, 1020
BspCNI CTCAG 2 cut(s) 945, 1159
BspEI TCCGGA 1 cut(s) 327
BspFNI CGCG 1 cut(s) 271
BspLI GGNNCC 2 cut(s) 846, 1019
BspPI GGATC 2 cut(s) 238, 363
BsrGI TGTACA 1 cut(s) 10
BssECI CCNNGG 4 cut(s) 94, 1021, 1049, 1120
BssMI GATC 4 cut(s) 230, 316, 355, 690
BssT1I CCWWGG 3 cut(s) 94, 1049, 1120
Bst2UI CCWGG 6 cut(s) 49, 294, 702, 789, 1022, 1133
Bst4CI ACNGT 6 cut(s) 10, 44, 111, 394, 666, 984
Bst6I CTCTTC 2 cut(s) 533, 774
BstAPI GCANNNNNTGC 1 cut(s) 1142
BstAUI TGTACA 1 cut(s) 10
BstBAI YACGTR 1 cut(s) 1064
BstC8I GCNNGC 3 cut(s) 546, 951, 1114
BstDEI CTNAG 3 cut(s) 246, 932, 1146
BstDSI CCRYGG 1 cut(s) 1049
BstEII GGTNACC 1 cut(s) 135
BstF5I GGATG 4 cut(s) 577, 625, 917, 1042
BstFNI CGCG 1 cut(s) 271
BstHHI GCGC 1 cut(s) 1127
BstKTI GATC 4 cut(s) 233, 319, 358, 693
BstMBI GATC 4 cut(s) 230, 316, 355, 690
BstMWI GCNNNNNNNGC 3 cut(s) 1122, 1133, 1142
BstNI CCWGG 6 cut(s) 49, 294, 702, 789, 1022, 1133
BstPI GGTNACC 1 cut(s) 135
BstSCI CCNGG 7 cut(s) 47, 292, 346, 700, 787, 1020, 1131
BstSLI GKGCMC 1 cut(s) 8
BstUI CGCG 1 cut(s) 271
BstV1I GCAGC 4 cut(s) 30, 437, 605, 811
BstV2I GAAGAC 1 cut(s) 630
BstX2I RGATCY 2 cut(s) 355, 690
BstYI RGATCY 2 cut(s) 355, 690
BsuI GTATCC 1 cut(s) 766
BsuRI GGCC 3 cut(s) 480, 845, 1020
BtgI CCRYGG 1 cut(s) 1049
BtrI CACGTC 1 cut(s) 729
BtsCI GGATG 4 cut(s) 577, 625, 917, 1042
BtsIMutI CAGTG 3 cut(s) 6, 49, 989
Cac8I GCNNGC 3 cut(s) 546, 951, 1114
CfoI GCGC 1 cut(s) 1127
Cfr13I GGNCC 2 cut(s) 844, 1018
CsiI ACCWGGT 1 cut(s) 700
Csp6I GTAC 3 cut(s) 11, 559, 1061
CviAII CATG 5 cut(s) 527, 879, 908, 956, 1050
CviQI GTAC 3 cut(s) 11, 559, 1061
DdeI CTNAG 3 cut(s) 246, 932, 1146
DpnI GATC 4 cut(s) 232, 318, 357, 692
DpnII GATC 4 cut(s) 230, 316, 355, 690
DraI TTTAAA 1 cut(s) 123
EaeI YGGCCR 1 cut(s) 478
Eam1104I CTCTTC 2 cut(s) 533, 774
EarI CTCTTC 2 cut(s) 533, 774
Eco130I CCWWGG 3 cut(s) 94, 1049, 1120
Eco24I GRGCYC 1 cut(s) 714
Eco32I GATATC 1 cut(s) 586
Eco57I CTGAAG 1 cut(s) 798
Eco88I CYCGRG 1 cut(s) 858
Eco91I GGTNACC 1 cut(s) 135
EcoO65I GGTNACC 1 cut(s) 135
EcoRII CCWGG 6 cut(s) 47, 292, 700, 787, 1020, 1131
EcoRV GATATC 1 cut(s) 586
EcoT14I CCWWGG 3 cut(s) 94, 1049, 1120
EcoT38I GRGCYC 1 cut(s) 714
ErhI CCWWGG 3 cut(s) 94, 1049, 1120
FaeI CATG 5 cut(s) 530, 882, 911, 959, 1053
FaqI GGGAC 1 cut(s) 227
FatI CATG 5 cut(s) 526, 878, 907, 955, 1049
FauI CCCGC 2 cut(s) 14, 276
FblI GTMKAC 1 cut(s) 187
Fnu4HI GCNGC 4 cut(s) 19, 426, 594, 825
FokI GGATG 4 cut(s) 564, 632, 924, 1049
FriOI GRGCYC 1 cut(s) 714
Fsp4HI GCNGC 4 cut(s) 19, 426, 594, 825
FspBI CTAG 1 cut(s) 486
GlaI GCGC 1 cut(s) 1126
GluI GCNGC 4 cut(s) 19, 426, 594, 825
GsuI CTGGAG 1 cut(s) 276
HaeIII GGCC 3 cut(s) 480, 845, 1020
HapII CCGG 3 cut(s) 328, 348, 481
HhaI GCGC 1 cut(s) 1127
Hin1II CATG 5 cut(s) 530, 882, 911, 959, 1053
Hin6I GCGC 1 cut(s) 1125
HinP1I GCGC 1 cut(s) 1125
HindIII AAGCTT 1 cut(s) 864
HinfI GANTC 3 cut(s) 214, 889, 977
HpaII CCGG 3 cut(s) 328, 348, 481
HphI GGTGA 5 cut(s) 166, 353, 362, 764, 1084
Hpy166II GTNNAC 4 cut(s) 13, 188, 344, 766
Hpy188I TCNGA 8 cut(s) 235, 316, 360, 408, 445, 894, 935, 1149
Hpy188III TCNNGA 8 cut(s) 161, 218, 328, 581, 673, 707, 860, 1031
Hpy8I GTNNAC 4 cut(s) 13, 188, 344, 766
HpyAV CCTTC 7 cut(s) 150, 181, 213, 221, 1017, 1049, 1149
HpyCH4III ACNGT 6 cut(s) 10, 44, 111, 394, 666, 984
HpyCH4IV ACGT 2 cut(s) 728, 1063
HpyCH4V TGCA 7 cut(s) 425, 577, 827, 878, 907, 953, 1086
HpyF10VI GCNNNNNNNGC 3 cut(s) 1122, 1133, 1142
HpyF3I CTNAG 3 cut(s) 246, 932, 1146
HpySE526I ACGT 2 cut(s) 728, 1063
Hsp92II CATG 5 cut(s) 530, 882, 911, 959, 1053
HspAI GCGC 1 cut(s) 1125
Kpn2I TCCGGA 1 cut(s) 327
Kzo9I GATC 4 cut(s) 230, 316, 355, 690
LmnI GCTCC 1 cut(s) 1051
Lsp1109I GCAGC 4 cut(s) 30, 437, 605, 811
LweI GCATC 3 cut(s) 412, 586, 1073
MabI ACCWGGT 1 cut(s) 700
MaeI CTAG 1 cut(s) 486
MaeII ACGT 2 cut(s) 728, 1063
MaeIII GTNAC 4 cut(s) 135, 364, 752, 800
MalI GATC 4 cut(s) 232, 318, 357, 692
MboI GATC 4 cut(s) 230, 316, 355, 690
MboII GAAGA 6 cut(s) 233, 550, 635, 791, 803, 948
MfeI CAATTG 1 cut(s) 179
MflI RGATCY 2 cut(s) 355, 690
MhlI GDGCHC 2 cut(s) 8, 714
MluCI AATT 5 cut(s) 179, 297, 522, 1002, 1103
MlyI GAGTC 1 cut(s) 223
MmeI TCCRAC 1 cut(s) 284
MroI TCCGGA 1 cut(s) 327
MseI TTAA 3 cut(s) 27, 122, 432
MslI CAYNNNNRTG 3 cut(s) 474, 531, 645
MspA1I CMGCKG 2 cut(s) 21, 428
MspI CCGG 3 cut(s) 328, 348, 481
MspR9I CCNGG 7 cut(s) 49, 294, 348, 702, 789, 1022, 1133
MunI CAATTG 1 cut(s) 179
MvaI CCWGG 6 cut(s) 49, 294, 702, 789, 1022, 1133
MvnI CGCG 1 cut(s) 271
MwoI GCNNNNNNNGC 3 cut(s) 1122, 1133, 1142
NciI CCSGG 1 cut(s) 348
NcoI CCATGG 1 cut(s) 1049
NdeII GATC 4 cut(s) 230, 316, 355, 690
NlaIII CATG 5 cut(s) 530, 882, 911, 959, 1053
NlaIV GGNNCC 2 cut(s) 846, 1019
NmuCI GTSAC 2 cut(s) 752, 800
PfeI GAWTC 2 cut(s) 889, 977
PfoI TCCNGGA 1 cut(s) 292
PkrI GCNGC 4 cut(s) 20, 427, 595, 826
PleI GAGTC 1 cut(s) 222
PpsI GAGTC 1 cut(s) 222
Ppu21I YACGTR 1 cut(s) 1064
PsiI TTATAA 1 cut(s) 152
Psp6I CCWGG 6 cut(s) 47, 292, 700, 787, 1020, 1131
PspEI GGTNACC 1 cut(s) 135
PspGI CCWGG 6 cut(s) 47, 292, 700, 787, 1020, 1131
PspN4I GGNNCC 2 cut(s) 846, 1019
PspPI GGNCC 2 cut(s) 844, 1018
PsuI RGATCY 2 cut(s) 355, 690
RsaI GTAC 3 cut(s) 12, 560, 1062
RsaNI GTAC 3 cut(s) 11, 559, 1061
RseI CAYNNNNRTG 3 cut(s) 474, 531, 645
SaqAI TTAA 3 cut(s) 27, 122, 432
SatI GCNGC 4 cut(s) 19, 426, 594, 825
Sau3AI GATC 4 cut(s) 230, 316, 355, 690
Sau96I GGNCC 2 cut(s) 844, 1018
SchI GAGTC 1 cut(s) 223
ScrFI CCNGG 7 cut(s) 49, 294, 348, 702, 789, 1022, 1133
SduI GDGCHC 2 cut(s) 8, 714
SexAI ACCWGGT 1 cut(s) 700
SfaNI GCATC 3 cut(s) 412, 586, 1073
SmiMI CAYNNNNRTG 3 cut(s) 474, 531, 645
SmlI CTYRAG 1 cut(s) 707
SmoI CTYRAG 1 cut(s) 707
SpeI ACTAGT 1 cut(s) 485
Sse9I AATT 5 cut(s) 179, 297, 522, 1002, 1103
SsiI CCGC 5 cut(s) 16, 21, 269, 278, 428
SspI AATATT 2 cut(s) 418, 459
SspMI CTAG 1 cut(s) 486
StyD4I CCNGG 7 cut(s) 47, 292, 346, 700, 787, 1020, 1131
StyI CCWWGG 3 cut(s) 94, 1049, 1120
TaaI ACNGT 6 cut(s) 10, 44, 111, 394, 666, 984
TaiI ACGT 2 cut(s) 731, 1066
TasI AATT 5 cut(s) 179, 297, 522, 1002, 1103
TatI WGTACW 1 cut(s) 10
TfiI GAWTC 2 cut(s) 889, 977
Tru1I TTAA 3 cut(s) 27, 122, 432
Tru9I TTAA 3 cut(s) 27, 122, 432
TscAI CASTG 3 cut(s) 13, 49, 989
TseFI GTSAC 2 cut(s) 752, 800
TseI GCWGC 4 cut(s) 18, 425, 593, 824
Tsp45I GTSAC 2 cut(s) 752, 800
TspDTI ATGAA 7 cut(s) 240, 515, 601, 615, 636, 972, 983
TspRI CASTG 3 cut(s) 13, 49, 989
XapI RAATTY 1 cut(s) 1103
XmiI GTMKAC 1 cut(s) 187
XspI CTAG 1 cut(s) 486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.