pycom11g16380

Nuclear cap-binding protein subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0007238
Physical Location & Seq
Forward (+)
17967931 .. 17983046
15116 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2595 bp
ATGAGCAGTTGGAAGAGTCTTCTTCTTCGAATTGGCGAAAAGTCTTCCGACTATGGCACCTCCGACGACGTCAAAGAACACATTGAAACTTGCTATGGCGTGCTTCGCCGAGAATTGGAGCACTCTCCCGACGACGTTTCGCAATTCCTTATCCAGTGTGCCGAACAGTTGCCTCACAAGAGTCCTTTATATGGAACAGTGATTGGCTTATTAAATTTGGAGAACGAGGAATTTATTAGGAAAGTAGTTGAGAACACTCAAACTAATTTTCAGGATGCTTTAGCTTCCGGAAATTGTAACAAGATTCGTATTTTGATGAGGTTCCTGACTGTTATGATGTGCAGTAAAGTTATCCATCCCAGTTCTCTTGTGGTTGTGTTCGAAACATTGTTATCGTCAGCTGCAACAACAGTTGATGAGGAGAAAGGCAATCCATCCTGGCAATCACGAGCTGACTTTTACATAACATGCATTTTATCTTGTCTCCCTTGGGGAGGAGCAGAACTCATTGAGCAAGTCCCTGAGGAAATCGAGAGAGTTATGGTCGGTGTTGAAGCTTATTTGAGCATAAGAAAACGTTCTTCTGACACTGGGTTGTCCTTTTTTGAGGATGATGATGAGAATGGGAGAGAACCTAGCGATAAGGATTTCTTGGAAGATTTGTGGGGCCGAATACAAGTTTTATCTAGCAATGGATGGAAACTTGATAGTGTTCCTAGACCTCACCTATCATTTGAAGCACAGCTAGTTGCAGGAAAGTCTCACGAGTTTGGACCCATCAGCTGTCCTGACCAACCTGCTATGCCTTCAACAATGTCTAATATAACTTATGGTAAACAAAAGCATGATGCCGAGTTTATCTATCCACAAAGGATACGAAGGCTGAATATATTTCCTGAAAGCAAAACTGAGGACGTGCAACCCATGGATCGCTTCATCGTGGAAGAGTATCTGCTAGATGTGCTATTTTACTTAAATGGCTGTCGAAAAGAATGCGCTTCATATATGGCTGGCCTACCTGTGCCCTTTAGATATGAGTATCTTATGGCAGAGACAATTTTCTCCCAGTTGCTTATGCTACCACAACCCCCTTTCAGGCCAATATATTACACACTAGTTATTATTGACCTCTGTAAGGCTCTTCCCGGAGCCTTTCCCGCAGTAGTTGCCGGTGCTGTACGAGCTCTTTTTGACAAAATAGCTGATTTAGATATGGAATGTCAAACACGACTCATCCTTTGGTTTTCACACCACTTATCGATCTTTCAGTTCATCTGGCCATGGGAAGAGTGGGCTCATGTCTTAGACCTTCCAAAATGGGCCCCACAGCGTGTTTTTGTTCAGGAGGTGCTGGAGAGAGAAGTCCGTTTATCTTACTGGGATAAAGTGAAGCAGAGTATTGAGCATGCCCCTGGTCTAGAAGAGTTGCTTCCTCCCAAGGGAGCACCGAATTTCAAATTTAGTGTTGAAGAAACCAGCGAAGGAAATGAGCTAAATGCACTTTCTTCTGACCTCAGAAACATGGTGAAAGCTAGGGCATCTGCCCGTGAAATGATAGTATGGATAGAGGAAAGTGTGTTTCCTGTTCATGGGATGGAAGTTACCCTCAATGTGGTTGTGCAAACTCTCCTCGACATTGGATCTAAAAGTTTTACTCATTTGATTACCGTATTGGAGAGATATGGCCAAGTCATTGCAAAACTATGTGCTGACCAGGATAAGCAGGTCATGCTGATAAATGAGGTTGATTCTTACTGGAGGAATAATTCTCAAATGACTGCTATTGCAATAGATAGGATGATGGGCTATCGACTTTTGTCTAATCTGGCCATTGTCAGATGGGTCTTTTTACCTGCAAACATTGAGCAATTTCATATATCAGATCGTCCATGGGAGATACTAAGAAATGCAGTTAGCAAGACATATAACCGTGTATGTGATCTAAGGAAGGAGATTTCATCTATGAAAAAGAGTGTTGTATCAGCTGAAGAAGCTGCAGCAACGGTGAAAGCAGAGTTAGAAGCGTCTGAATCAAAGCTTTCACTCATGGATGGTGAACCTGTTATGGGGGAAAATCCTGTGAGGCTGAAGCGTTTGAAATCACGTGCTGAAAAGGCTAAGGAGGATGCCGTGTCTGTACATGAATCTTTAGAGGCTAAGGAGGCTCTTCTAGCCCGATCCCTTGATGAATTTGAGGCATTGTTCTTCTCCTTGTACAAAAACTTCCTCAATGCGTTGACGGAACGGCTGCCAGAAGCATCCAAATGTGTTACATTGCAGGGATTAAAGGGGATTCATGCAGATTCTATGGCCGTTGACCTTGAGGAATCATCCGCAATGGATGTCGACAATGAGAATGGAATACCCAAGAAAAGTGAACTGAATGGTGGGAAGACGAGTAATGTTTATAATGTAGGTGAAAAAGAGCAGTGGTGTCTATCGACTTTAGGCTACCTCAAGGCCTTCTCGAGGCAATATGCTTCTGAGATTTGGCCTCACATGGAGAAGTTGGATGCAGAGGTTCTAACCGAAGACGTGCATCCTCTTATTCGTAAATCAGTTTATAGTGGTCTTCGTCGAGCAACTGATGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000339 GO:0000375 GO:0000377 GO:0000394 GO:0000398 GO:0000956 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005845 GO:0005846 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009892 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0019439 GO:0022414 GO:0031047 GO:0031050 GO:0031053 GO:0031503 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033993 GO:0034470 GO:0034518 GO:0034613 GO:0034641 GO:0034655 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048519 GO:0048571 GO:0048573 GO:0048574 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0070887 GO:0070918 GO:0071166 GO:0071310 GO:0071359 GO:0071407 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0097159 GO:0097305 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901698 GO:1901699 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03040 map03013 map03015 map03040
Pfam Domains
Protein Families
MIF4G MIF4G_like MIF4G_like_2

Protein Analysis

865

Amino Acids

98.15

Weight (kDa)

5.16

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MIF4G PF02854 20 - 223 3.7e-31 MIF4G domain
MIF4G_like PF09088 341 - 467 1e-36 MIF4G like
MIF4G_like_2 PF09090 485 - 753 4.5e-31 MIF4G like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2409
AatII GACGTC 1 cut(s) 72
Acc36I ACCTGC 3 cut(s) 805, 1714, 1861
AccB1I GGYRCC 1 cut(s) 56
AccI GTMKAC 1 cut(s) 2346
AccIII TCCGGA 1 cut(s) 287
AciI CCGC 2 cut(s) 1158, 2334
AclI AACGTT 1 cut(s) 577
AclWI GGATC 3 cut(s) 936, 1648, 2172
AcoI YGGCCR 4 cut(s) 1277, 1684, 1827, 2310
AcsI RAATTY 5 cut(s) 214, 230, 1450, 1457, 2189
AcuI CTGAAG 2 cut(s) 2007, 2108
AcvI CACGTG 1 cut(s) 2105
AcyI GRCGYC 1 cut(s) 69
AdeI CACNNNGTG 1 cut(s) 1331
AfaI GTAC 3 cut(s) 1179, 2139, 2216
AgsI TTSAA 7 cut(s) 86, 554, 737, 810, 1456, 1469, 2098
AhlI ACTAGT 1 cut(s) 1114
AjiI CACGTC 2 cut(s) 916, 2536
AjnI CCWGG 3 cut(s) 437, 1411, 1713
Alw21I GWGCWC 3 cut(s) 123, 1186, 1447
Alw26I GTCTC 3 cut(s) 488, 765, 1046
AlwI GGATC 3 cut(s) 936, 1648, 2172
Ama87I CYCGRG 1 cut(s) 2467
Aor13HI TCCGGA 1 cut(s) 287
ApaI GGGCCC 1 cut(s) 1324
ApeKI GCWGC 4 cut(s) 401, 1994, 1997, 2248
ApoI RAATTY 5 cut(s) 214, 230, 1450, 1457, 2189
ArsI GACNNNNNNTTYG 2 cut(s) 1221, 1253
Asp700I GAANNNNTTC 1 cut(s) 577
AspLEI GCGC 1 cut(s) 998
AspS9I GGNCC 4 cut(s) 667, 773, 1320, 1321
AsuC2I CCSGG 1 cut(s) 1146
AsuHPI GGTGA 5 cut(s) 716, 1537, 2017, 2066, 2429
AsuII TTCGAA 2 cut(s) 28, 381
AvaI CYCGRG 1 cut(s) 2467
AvaII GGWCC 1 cut(s) 773
AxyI CCTNAGG 1 cut(s) 522
BaeGI GKGCMC 2 cut(s) 1026, 1324
BalI TGGCCA 3 cut(s) 1279, 1686, 1829
BanI GGYRCC 1 cut(s) 56
BanII GRGCYC 3 cut(s) 1186, 1297, 1324
BarI GAAGNNNNNNTAC 2 cut(s) 2207, 2239
BauI CACGAG 2 cut(s) 447, 764
BbrPI CACGTG 1 cut(s) 2105
BbsI GAAGAC 5 cut(s) 11, 36, 2399, 2538, 2564
Bbv12I GWGCWC 3 cut(s) 123, 1186, 1447
BbvI GCAGC 4 cut(s) 388, 1981, 2009, 2235
BccI CCATC 9 cut(s) 363, 442, 690, 785, 1588, 1795, 1833, 2045, 2582
BceAI ACGGC 3 cut(s) 2114, 2261, 2297
BcgI CGANNNNNNTGC 2 cut(s) 975, 1009
BciT130I CCWGG 3 cut(s) 439, 1413, 1715
BciVI GTATCC 1 cut(s) 867
BcnI CCSGG 1 cut(s) 1146
BcoDI GTCTC 3 cut(s) 488, 765, 1046
BcuI ACTAGT 1 cut(s) 1114
BfaI CTAG 9 cut(s) 636, 687, 717, 746, 956, 1115, 1418, 1533, 2171
BfmI CTRYAG 1 cut(s) 1995
BfuAI ACCTGC 3 cut(s) 805, 1714, 1861
BfuI GTATCC 1 cut(s) 867
BisI GCNGC 4 cut(s) 402, 1995, 1998, 2249
BlsI GCNGC 4 cut(s) 403, 1996, 1999, 2250
Bme1390I CCNGG 4 cut(s) 439, 1146, 1413, 1715
Bme18I GGWCC 1 cut(s) 773
BmeT110I CYCGRG 1 cut(s) 2467
BmgBI CACGTC 2 cut(s) 916, 2536
BmgT120I GGNCC 4 cut(s) 667, 773, 1320, 1321
BmiI GGNNCC 7 cut(s) 58, 323, 668, 775, 1150, 1322, 1323
BmrFI CCNGG 4 cut(s) 439, 1146, 1413, 1715
BmrI ACTGGG 4 cut(s) 354, 600, 1060, 1387
BmsI GCATC 7 cut(s) 265, 838, 1547, 2116, 2267, 2503, 2548
BmuI ACTGGG 4 cut(s) 354, 600, 1060, 1387
BoxI GACNNNNGTC 1 cut(s) 1816
BpiI GAAGAC 5 cut(s) 11, 36, 2399, 2538, 2564
BplI GAGNNNNNCTC 2 cut(s) 489, 521
BpmI CTGGAG 2 cut(s) 1373, 1777
Bpu10I CCTNAGC 2 cut(s) 2118, 2157
Bpu14I TTCGAA 2 cut(s) 28, 381
BpuEI CTTGAG 2 cut(s) 2342, 2441
BpuMI CCSGG 1 cut(s) 1146
Bsa29I ATCGAT 1 cut(s) 1259
BsaAI YACGTR 1 cut(s) 2105
BsaHI GRCGYC 1 cut(s) 69
BsaJI CCNNGG 6 cut(s) 488, 924, 1280, 1411, 1437, 1889
BsaWI WCCGGW 1 cut(s) 287
Bse118I RCCGGY 1 cut(s) 1169
Bse1I ACTGG 6 cut(s) 154, 360, 595, 1066, 1382, 1760
Bse21I CCTNAGG 1 cut(s) 522
Bse3DI GCAATG 4 cut(s) 697, 1692, 2273, 2343
BseAI TCCGGA 1 cut(s) 287
BseBI CCWGG 3 cut(s) 439, 1413, 1715
BseCI ATCGAT 1 cut(s) 1259
BseDI CCNNGG 6 cut(s) 488, 924, 1280, 1411, 1437, 1889
BseMI GCAATG 4 cut(s) 697, 1692, 2273, 2343
BseMII CTCAG 4 cut(s) 513, 900, 1528, 2475
BseNI ACTGG 6 cut(s) 154, 360, 595, 1066, 1382, 1760
BseRI GAGGAG 3 cut(s) 434, 510, 1619
BseSI GKGCMC 2 cut(s) 1026, 1324
BseXI GCAGC 4 cut(s) 388, 1981, 2009, 2235
BsgI GTGCAG 1 cut(s) 361
BshNI GGYRCC 1 cut(s) 56
BshVI ATCGAT 1 cut(s) 1259
BsiHKAI GWGCWC 3 cut(s) 123, 1186, 1447
BsiHKCI CYCGRG 1 cut(s) 2467
BsiSI CCGG 3 cut(s) 288, 1146, 1170
BslFI GGGAC 1 cut(s) 503
BsmAI GTCTC 3 cut(s) 488, 765, 1046
BsmFI GGGAC 1 cut(s) 503
BsmI GAATGC 1 cut(s) 998
BsoBI CYCGRG 1 cut(s) 2467
Bsp119I TTCGAA 2 cut(s) 28, 381
Bsp120I GGGCCC 1 cut(s) 1320
Bsp1286I GDGCHC 6 cut(s) 123, 1026, 1186, 1297, 1324, 1447
Bsp13I TCCGGA 1 cut(s) 287
Bsp1407I TGTACA 2 cut(s) 2137, 2214
Bsp143I GATC 6 cut(s) 928, 1260, 1640, 1882, 1939, 2177
Bsp19I CCATGG 3 cut(s) 924, 1280, 1889
BspACI CCGC 2 cut(s) 1158, 2334
BspCNI CTCAG 4 cut(s) 514, 901, 1527, 2476
BspDI ATCGAT 1 cut(s) 1259
BspEI TCCGGA 1 cut(s) 287
BspLI GGNNCC 7 cut(s) 58, 323, 668, 775, 1150, 1322, 1323
BspMAI CTGCAG 1 cut(s) 1999
BspMI ACCTGC 3 cut(s) 805, 1714, 1861
BspPI GGATC 3 cut(s) 936, 1648, 2172
BspQI GCTCTTC 2 cut(s) 1146, 2172
BspT104I TTCGAA 2 cut(s) 28, 381
BspT107I GGYRCC 1 cut(s) 56
BsrDI GCAATG 4 cut(s) 697, 1692, 2273, 2343
BsrFI RCCGGY 1 cut(s) 1169
BsrGI TGTACA 2 cut(s) 2137, 2214
BsrI ACTGG 6 cut(s) 154, 360, 595, 1066, 1382, 1760
BssAI RCCGGY 1 cut(s) 1169
BssECI CCNNGG 6 cut(s) 488, 924, 1280, 1411, 1437, 1889
BssMI GATC 6 cut(s) 928, 1260, 1640, 1882, 1939, 2177
BssNI GRCGYC 1 cut(s) 69
BssSI CACGAG 2 cut(s) 447, 764
BssT1I CCWWGG 5 cut(s) 488, 924, 1280, 1437, 1889
Bst2BI CACGAG 2 cut(s) 447, 764
Bst2UI CCWGG 3 cut(s) 439, 1413, 1715
Bst4CI ACNGT 7 cut(s) 168, 199, 331, 412, 1669, 1931, 2005
Bst6I CTCTTC 6 cut(s) 8, 939, 1146, 1281, 1416, 2172
BstACI GRCGYC 1 cut(s) 69
BstAPI GCANNNNNTGC 2 cut(s) 1166, 1729
BstAUI TGTACA 2 cut(s) 2137, 2214
BstBAI YACGTR 1 cut(s) 2105
BstBI TTCGAA 2 cut(s) 28, 381
BstC8I GCNNGC 3 cut(s) 101, 1012, 1407
BstDEI CTNAG 9 cut(s) 522, 909, 1303, 1514, 1901, 1943, 2118, 2157, 2484
BstDSI CCRYGG 3 cut(s) 924, 1280, 1889
BstENI CCTNNNNNAGG 3 cut(s) 492, 1133, 2467
BstHHI GCGC 1 cut(s) 998
BstKTI GATC 6 cut(s) 931, 1263, 1643, 1885, 1942, 2180
BstMAI GTCTC 3 cut(s) 488, 765, 1046
BstMBI GATC 6 cut(s) 928, 1260, 1640, 1882, 1939, 2177
BstNI CCWGG 3 cut(s) 439, 1413, 1715
BstNSI RCATGY 2 cut(s) 471, 1409
BstPAI GACNNNNGTC 1 cut(s) 1816
BstSCI CCNGG 4 cut(s) 437, 1144, 1411, 1713
BstSFI CTRYAG 1 cut(s) 1995
BstSLI GKGCMC 2 cut(s) 1026, 1324
BstV1I GCAGC 4 cut(s) 388, 1981, 2009, 2235
BstV2I GAAGAC 5 cut(s) 11, 36, 2399, 2538, 2564
BstX2I RGATCY 1 cut(s) 1640
BstYI RGATCY 1 cut(s) 1640
Bsu15I ATCGAT 1 cut(s) 1259
Bsu36I CCTNAGG 1 cut(s) 522
BsuI GTATCC 1 cut(s) 867
BsuTUI ATCGAT 1 cut(s) 1259
BtgI CCRYGG 3 cut(s) 924, 1280, 1889
BtrI CACGTC 2 cut(s) 916, 2536
BtsI GCAGTG 1 cut(s) 2435
BtsIMutI CAGTG 4 cut(s) 161, 204, 588, 2435
BveI ACCTGC 3 cut(s) 805, 1714, 1861
Cac8I GCNNGC 3 cut(s) 101, 1012, 1407
CfoI GCGC 1 cut(s) 998
Cfr10I RCCGGY 1 cut(s) 1169
Cfr13I GGNCC 4 cut(s) 667, 773, 1320, 1321
ClaI ATCGAT 1 cut(s) 1259
CseI GACGC 1 cut(s) 2013
Csp6I GTAC 3 cut(s) 1178, 2138, 2215
CviQI GTAC 3 cut(s) 1178, 2138, 2215
DdeI CTNAG 9 cut(s) 522, 909, 1303, 1514, 1901, 1943, 2118, 2157, 2484
DpnI GATC 6 cut(s) 930, 1262, 1642, 1884, 1941, 2179
DpnII GATC 6 cut(s) 928, 1260, 1640, 1882, 1939, 2177
DraIII CACNNNGTG 1 cut(s) 1331
EaeI YGGCCR 4 cut(s) 1277, 1684, 1827, 2310
Eam1104I CTCTTC 6 cut(s) 8, 939, 1146, 1281, 1416, 2172
EarI CTCTTC 6 cut(s) 8, 939, 1146, 1281, 1416, 2172
Ecl136II GAGCTC 1 cut(s) 1184
Eco130I CCWWGG 5 cut(s) 488, 924, 1280, 1437, 1889
Eco147I AGGCCT 1 cut(s) 2462
Eco24I GRGCYC 3 cut(s) 1186, 1297, 1324
Eco47I GGWCC 1 cut(s) 773
Eco53kI GAGCTC 1 cut(s) 1184
Eco57I CTGAAG 2 cut(s) 2007, 2108
Eco72I CACGTG 1 cut(s) 2105
Eco81I CCTNAGG 1 cut(s) 522
Eco88I CYCGRG 1 cut(s) 2467
EcoICRI GAGCTC 1 cut(s) 1184
EcoNI CCTNNNNNAGG 3 cut(s) 492, 1133, 2467
EcoO109I RGGNCCY 1 cut(s) 1321
EcoRII CCWGG 3 cut(s) 437, 1411, 1713
EcoT14I CCWWGG 5 cut(s) 488, 924, 1280, 1437, 1889
EcoT22I ATGCAT 1 cut(s) 473
EcoT38I GRGCYC 3 cut(s) 1186, 1297, 1324
ErhI CCWWGG 5 cut(s) 488, 924, 1280, 1437, 1889
FalI AAGNNNNNCTT 4 cut(s) 635, 667, 1413, 1445
FaqI GGGAC 1 cut(s) 503
FauI CCCGC 1 cut(s) 1165
FblI GTMKAC 1 cut(s) 2346
Fnu4HI GCNGC 4 cut(s) 402, 1995, 1998, 2249
FriOI GRGCYC 3 cut(s) 1186, 1297, 1324
Fsp4HI GCNGC 4 cut(s) 402, 1995, 1998, 2249
FspBI CTAG 9 cut(s) 636, 687, 717, 746, 956, 1115, 1418, 1533, 2171
GlaI GCGC 1 cut(s) 997
GluI GCNGC 4 cut(s) 402, 1995, 1998, 2249
GsuI CTGGAG 2 cut(s) 1373, 1777
HapII CCGG 3 cut(s) 288, 1146, 1170
HgaI GACGC 1 cut(s) 2013
HhaI GCGC 1 cut(s) 998
Hin1I GRCGYC 1 cut(s) 69
Hin6I GCGC 1 cut(s) 996
HinP1I GCGC 1 cut(s) 996
HincII GTYRAC 3 cut(s) 2238, 2317, 2347
HindII GTYRAC 3 cut(s) 2238, 2317, 2347
HindIII AAGCTT 2 cut(s) 555, 2036
HpaII CCGG 3 cut(s) 288, 1146, 1170
HphI GGTGA 5 cut(s) 716, 1537, 2017, 2066, 2429
Hpy166II GTNNAC 6 cut(s) 836, 2057, 2238, 2317, 2347, 2378
Hpy188I TCNGA 9 cut(s) 49, 64, 586, 1510, 1517, 1838, 1882, 2029, 2485
Hpy8I GTNNAC 6 cut(s) 836, 2057, 2238, 2317, 2347, 2378
Hpy99I CGWCG 5 cut(s) 68, 71, 134, 137, 2580
HpyAV CCTTC 6 cut(s) 816, 873, 1319, 1475, 1942, 2473
HpyCH4III ACNGT 7 cut(s) 168, 199, 331, 412, 1669, 1931, 2005
HpyCH4IV ACGT 6 cut(s) 69, 135, 577, 915, 2104, 2535
HpyF3I CTNAG 9 cut(s) 522, 909, 1303, 1514, 1901, 1943, 2118, 2157, 2484
HpySE526I ACGT 6 cut(s) 69, 135, 577, 915, 2104, 2535
Hsp92I GRCGYC 1 cut(s) 69
HspAI GCGC 1 cut(s) 996
Kpn2I TCCGGA 1 cut(s) 287
Kzo9I GATC 6 cut(s) 928, 1260, 1640, 1882, 1939, 2177
LguI GCTCTTC 2 cut(s) 1146, 2172
LmnI GCTCC 4 cut(s) 118, 497, 1148, 1442
Lsp1109I GCAGC 4 cut(s) 388, 1981, 2009, 2235
LweI GCATC 7 cut(s) 265, 838, 1547, 2116, 2267, 2503, 2548
MaeI CTAG 9 cut(s) 636, 687, 717, 746, 956, 1115, 1418, 1533, 2171
MaeII ACGT 6 cut(s) 69, 135, 577, 915, 2104, 2535
MaeIII GTNAC 3 cut(s) 296, 1600, 2269
MalI GATC 6 cut(s) 930, 1262, 1642, 1884, 1941, 2179
MboI GATC 6 cut(s) 928, 1260, 1640, 1882, 1939, 2177
MflI RGATCY 1 cut(s) 1640
MhlI GDGCHC 6 cut(s) 123, 1026, 1186, 1297, 1324, 1447
MlsI TGGCCA 3 cut(s) 1279, 1686, 1829
MluNI TGGCCA 3 cut(s) 1279, 1686, 1829
MlyI GAGTC 3 cut(s) 25, 190, 1224
MmeI TCCRAC 3 cut(s) 72, 87, 2490
Mox20I TGGCCA 3 cut(s) 1279, 1686, 1829
Mph1103I ATGCAT 1 cut(s) 473
MroI TCCGGA 1 cut(s) 287
MroXI GAANNNNTTC 1 cut(s) 577
MscI TGGCCA 3 cut(s) 1279, 1686, 1829
MseI TTAA 3 cut(s) 212, 974, 2285
MslI CAYNNNNRTG 1 cut(s) 2263
Msp20I TGGCCA 3 cut(s) 1279, 1686, 1829
MspA1I CMGCKG 3 cut(s) 401, 783, 1985
MspI CCGG 3 cut(s) 288, 1146, 1170
MspR9I CCNGG 4 cut(s) 439, 1146, 1413, 1715
Mva1269I GAATGC 1 cut(s) 998
MvaI CCWGG 3 cut(s) 439, 1413, 1715
NciI CCSGG 1 cut(s) 1146
NcoI CCATGG 3 cut(s) 924, 1280, 1889
NdeII GATC 6 cut(s) 928, 1260, 1640, 1882, 1939, 2177
NlaIV GGNNCC 7 cut(s) 58, 323, 668, 775, 1150, 1322, 1323
NmeAIII GCCGAG 2 cut(s) 134, 877
NsiI ATGCAT 1 cut(s) 473
NspI RCATGY 2 cut(s) 471, 1409
NspV TTCGAA 2 cut(s) 28, 381
PaeI GCATGC 1 cut(s) 1409
PaeR7I CTCGAG 1 cut(s) 2467
PceI AGGCCT 1 cut(s) 2462
PciSI GCTCTTC 2 cut(s) 1146, 2172
PctI GAATGC 1 cut(s) 998
PdmI GAANNNNTTC 1 cut(s) 577
PfeI GAWTC 7 cut(s) 304, 1748, 2030, 2144, 2293, 2303, 2327
PflFI GACNNNGTC 1 cut(s) 68
PfoI TCCNGGA 1 cut(s) 1144
PkrI GCNGC 4 cut(s) 403, 1996, 1999, 2250
PleI GAGTC 3 cut(s) 24, 189, 1224
PmaCI CACGTG 1 cut(s) 2105
PmlI CACGTG 1 cut(s) 2105
PpsI GAGTC 3 cut(s) 24, 189, 1224
Ppu21I YACGTR 1 cut(s) 2105
PshAI GACNNNNGTC 1 cut(s) 1816
PsiI TTATAA 1 cut(s) 2409
Psp124BI GAGCTC 1 cut(s) 1186
Psp1406I AACGTT 1 cut(s) 577
Psp6I CCWGG 3 cut(s) 437, 1411, 1713
PspCI CACGTG 1 cut(s) 2105
PspGI CCWGG 3 cut(s) 437, 1411, 1713
PspN4I GGNNCC 7 cut(s) 58, 323, 668, 775, 1150, 1322, 1323
PspOMI GGGCCC 1 cut(s) 1320
PspPI GGNCC 4 cut(s) 667, 773, 1320, 1321
PstI CTGCAG 1 cut(s) 1999
PsuI RGATCY 1 cut(s) 1640
PsyI GACNNNGTC 1 cut(s) 68
PvuII CAGCTG 3 cut(s) 401, 783, 1985
RsaI GTAC 3 cut(s) 1179, 2139, 2216
RsaNI GTAC 3 cut(s) 1178, 2138, 2215
RseI CAYNNNNRTG 1 cut(s) 2263
SacI GAGCTC 1 cut(s) 1186
SalI GTCGAC 1 cut(s) 2345
SapI GCTCTTC 2 cut(s) 1146, 2172
SaqAI TTAA 3 cut(s) 212, 974, 2285
SatI GCNGC 4 cut(s) 402, 1995, 1998, 2249
Sau3AI GATC 6 cut(s) 928, 1260, 1640, 1882, 1939, 2177
Sau96I GGNCC 4 cut(s) 667, 773, 1320, 1321
SchI GAGTC 3 cut(s) 25, 190, 1224
ScrFI CCNGG 4 cut(s) 439, 1146, 1413, 1715
SduI GDGCHC 6 cut(s) 123, 1026, 1186, 1297, 1324, 1447
SfaNI GCATC 7 cut(s) 265, 838, 1547, 2116, 2267, 2503, 2548
SfcI CTRYAG 1 cut(s) 1995
Sfr274I CTCGAG 1 cut(s) 2467
SfuI TTCGAA 2 cut(s) 28, 381
SinI GGWCC 1 cut(s) 773
SlaI CTCGAG 1 cut(s) 2467
SmiMI CAYNNNNRTG 1 cut(s) 2263
SmlI CTYRAG 3 cut(s) 2321, 2456, 2467
SmoI CTYRAG 3 cut(s) 2321, 2456, 2467
SpeI ACTAGT 1 cut(s) 1114
SphI GCATGC 1 cut(s) 1409
SseBI AGGCCT 1 cut(s) 2462
SsiI CCGC 2 cut(s) 1158, 2334
SspMI CTAG 9 cut(s) 636, 687, 717, 746, 956, 1115, 1418, 1533, 2171
SstI GAGCTC 1 cut(s) 1186
StuI AGGCCT 1 cut(s) 2462
StyD4I CCNGG 4 cut(s) 437, 1144, 1411, 1713
StyI CCWWGG 5 cut(s) 488, 924, 1280, 1437, 1889
TaaI ACNGT 7 cut(s) 168, 199, 331, 412, 1669, 1931, 2005
TaiI ACGT 6 cut(s) 72, 138, 580, 918, 2107, 2538
TatI WGTACW 2 cut(s) 2137, 2214
TfiI GAWTC 7 cut(s) 304, 1748, 2030, 2144, 2293, 2303, 2327
Tru1I TTAA 3 cut(s) 212, 974, 2285
Tru9I TTAA 3 cut(s) 212, 974, 2285
TscAI CASTG 4 cut(s) 161, 204, 595, 2435
TseI GCWGC 4 cut(s) 401, 1994, 1997, 2248
TspGWI ACGGA 2 cut(s) 1355, 2255
TspRI CASTG 4 cut(s) 161, 204, 595, 2435
Tth111I GACNNNGTC 1 cut(s) 68
VpaK11BI GGWCC 1 cut(s) 773
XagI CCTNNNNNAGG 3 cut(s) 492, 1133, 2467
XapI RAATTY 5 cut(s) 214, 230, 1450, 1457, 2189
XbaI TCTAGA 1 cut(s) 1417
XceI RCATGY 2 cut(s) 471, 1409
XcmI CCANNNNNNNNNTGG 2 cut(s) 367, 1287
XhoI CTCGAG 1 cut(s) 2467
XmiI GTMKAC 1 cut(s) 2346
XmnI GAANNNNTTC 1 cut(s) 577
XspI CTAG 9 cut(s) 636, 687, 717, 746, 956, 1115, 1418, 1533, 2171
ZraI GACGTC 1 cut(s) 70
Zsp2I ATGCAT 1 cut(s) 473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.