pycom11g21210
NAC Family

NAC domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
24344281 .. 24345490
1210 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g21210.3

Sequence Viewer

Length: 1011 bp
ATGGGTGTGCCGGAAACCGACCCACTGTCTCAGCTGAGCCTGCCGCCGGGGTTTCGATTCTATCCGACGGACGAGGAGCTTCTGGTTCAGTACCTCTGCCGCAAGGTTGCTGGGTACCAATTCAATCTGCAAATAATTGCTGAAATCGATCTCTACAAGTTCGATCCATGGGTTTTACCAAGCAAAGCTATATTTGGTGAAAAAGAATGGTACTTTTTCAGTCCGAGGGACCGGAAATACCCGAATGGGTCGCGACCCAATCGGGTTGCCGGCACTGGGTACTGGAAGGCCACTGGAACTGATAAGATCATAACAACTGAAGGTAAAAAAGTTGGTATTAAAAAAGCCCTTGTTTTCTATGTGGGCAAAGCCCCCAAAGGCATCAAGACCAATTGGATTATGCACGAGTATCGCCTCATCGAGCCCTCTCGCAAAAATGGCAGCTCCAGGTTGGATGAATGGGTTTTGTGTCGTATTTACAAGAAGAGCACCAGCTCAGCAGCGGCGGCGGCAGCACAGGAGTCCGTAACGAGCGTTTCGGGCAAAGAGCACAGCAACGGCTCGTCGTCGCCATGCTCTTCTCAGCTCGACGACGGGCTCGAGTGGTTGCCGGATATCGACGACCGGTTCTTCACCCTGCCCCGGATAAACTCGCTCAAGACGCTGCAGCAGCAGGACAGCAAGCTTAATTTTCAGAATACGGGTTCCGGGAATTTCGACTGGGCGAGTCTCGCGGGGCTCAACTCGGCGCCGGAACTCGGTCTCAATAATCAGACTCACCAAGGTCAAGGACAGATGAATTTGAATTACAATGACAATGACATGTTTGTCCCTTCAATCCCATCTCTCTGCCACGTGGAATCCCGGCCGGAGAGGGTTGGGAAGACGGCGGAGGAGGAGGTGCAGAGCGGACTCAGAACCCGGCGGGTGGACAACTCGGGATTCATCCAGCAGAACTCTCAGAACTTTTGTAACCCGGTTCGGCCCGGCGGGTTCGGGCTTTGGCAGTGA

Protein Analysis

337

Amino Acids

37.7

Weight (kDa)

8.47

Isoelectric Point (pI)

37.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013046)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 827
Acc65I GGTACC 1 cut(s) 114
AccB1I GGYRCC 2 cut(s) 114, 748
AccBSI CCGCTC 1 cut(s) 909
AccII CGCG 2 cut(s) 253, 734
AclWI GGATC 1 cut(s) 158
AcoI YGGCCR 1 cut(s) 866
AcsI RAATTY 2 cut(s) 712, 799
AcuI CTGAAG 1 cut(s) 339
AcvI CACGTG 1 cut(s) 856
AcyI GRCGYC 1 cut(s) 749
AfaI GTAC 4 cut(s) 92, 116, 212, 281
AfiI CCNNNNNNNGG 5 cut(s) 46, 276, 642, 758, 928
AflIII ACRYGT 1 cut(s) 822
AgeI ACCGGT 1 cut(s) 624
AgsI TTSAA 3 cut(s) 124, 805, 837
AhdI GACNNNNNGTC 1 cut(s) 25
AjnI CCWGG 1 cut(s) 446
AluBI AGCT 7 cut(s) 34, 79, 188, 444, 495, 586, 685
AluI AGCT 7 cut(s) 34, 79, 188, 444, 495, 586, 685
Alw21I GWGCWC 2 cut(s) 491, 552
Alw26I GTCTC 3 cut(s) 33, 734, 767
AlwI GGATC 1 cut(s) 158
Ama87I CYCGRG 2 cut(s) 599, 937
AoxI GGCC 3 cut(s) 288, 866, 983
ApeKI GCWGC 6 cut(s) 441, 500, 512, 664, 667, 670
ApoI RAATTY 2 cut(s) 712, 799
AsiGI ACCGGT 1 cut(s) 624
Asp718I GGTACC 1 cut(s) 114
AspLEI GCGC 1 cut(s) 751
AspS9I GGNCC 2 cut(s) 229, 984
AsuC2I CCSGG 7 cut(s) 48, 643, 709, 865, 922, 977, 987
AsuHPI GGTGA 3 cut(s) 209, 625, 770
AvaI CYCGRG 2 cut(s) 599, 937
AvaII GGWCC 1 cut(s) 229
BanI GGYRCC 2 cut(s) 114, 748
BanII GRGCYC 3 cut(s) 426, 600, 741
BauI CACGAG 1 cut(s) 404
BbrPI CACGTG 1 cut(s) 856
BbsI GAAGAC 1 cut(s) 890
Bbv12I GWGCWC 2 cut(s) 491, 552
BbvI GCAGC 6 cut(s) 453, 512, 524, 651, 679, 682
BccI CCATC 1 cut(s) 850
BceAI ACGGC 2 cut(s) 574, 903
BcgI CGANNNNNNTGC 2 cut(s) 392, 426
BciT130I CCWGG 1 cut(s) 448
BcnI CCSGG 7 cut(s) 48, 643, 709, 865, 922, 977, 987
BcoDI GTCTC 3 cut(s) 33, 734, 767
BfmI CTRYAG 1 cut(s) 665
BfoI RGCGCY 1 cut(s) 752
BlpI GCTNAGC 2 cut(s) 35, 496
Bme1390I CCNGG 8 cut(s) 48, 448, 643, 709, 865, 922, 977, 987
Bme18I GGWCC 1 cut(s) 229
BmeRI GACNNNNNGTC 1 cut(s) 25
BmeT110I CYCGRG 2 cut(s) 599, 937
BmgT120I GGNCC 2 cut(s) 229, 984
BmiI GGNNCC 4 cut(s) 116, 230, 706, 750
BmrFI CCNGG 8 cut(s) 48, 448, 643, 709, 865, 922, 977, 987
BmrI ACTGGG 2 cut(s) 285, 730
BmsI GCATC 1 cut(s) 390
BmuI ACTGGG 2 cut(s) 285, 730
BpiI GAAGAC 1 cut(s) 890
BpmI CTGGAG 1 cut(s) 430
Bpu1102I GCTNAGC 2 cut(s) 35, 496
BpuEI CTTGAG 1 cut(s) 641
BpuMI CCSGG 7 cut(s) 48, 643, 709, 865, 922, 977, 987
Bsa29I ATCGAT 1 cut(s) 147
BsaAI YACGTR 1 cut(s) 856
BsaHI GRCGYC 1 cut(s) 749
BsaI GGTCTC 1 cut(s) 767
BsaJI CCNNGG 5 cut(s) 47, 167, 224, 641, 781
BsaWI WCCGGW 2 cut(s) 231, 624
Bsc4I CCNNNNNNNGG 5 cut(s) 46, 276, 642, 758, 928
Bse118I RCCGGY 2 cut(s) 269, 624
Bse1I ACTGG 4 cut(s) 280, 287, 298, 725
BseBI CCWGG 1 cut(s) 448
BseCI ATCGAT 1 cut(s) 147
BseDI CCNNGG 5 cut(s) 47, 167, 224, 641, 781
BseGI GGATG 2 cut(s) 460, 945
BseLI CCNNNNNNNGG 5 cut(s) 46, 276, 642, 758, 928
BseMII CTCAG 6 cut(s) 26, 44, 510, 596, 928, 974
BseNI ACTGG 4 cut(s) 280, 287, 298, 725
BseRI GAGGAG 3 cut(s) 89, 908, 911
BseX3I CGGCCG 1 cut(s) 866
BseXI GCAGC 6 cut(s) 453, 512, 524, 651, 679, 682
BseYI CCCAGC 1 cut(s) 110
BsgI GTGCAG 1 cut(s) 923
Bsh1236I CGCG 2 cut(s) 253, 734
Bsh1285I CGRYCG 2 cut(s) 625, 869
BshFI GGCC 3 cut(s) 290, 868, 985
BshNI GGYRCC 2 cut(s) 114, 748
BshTI ACCGGT 1 cut(s) 624
BshVI ATCGAT 1 cut(s) 147
BsiEI CGRYCG 2 cut(s) 625, 869
BsiHKAI GWGCWC 2 cut(s) 491, 552
BsiHKCI CYCGRG 2 cut(s) 599, 937
BslFI GGGAC 2 cut(s) 242, 815
BslI CCNNNNNNNGG 5 cut(s) 46, 276, 642, 758, 928
BsmAI GTCTC 3 cut(s) 33, 734, 767
BsmFI GGGAC 2 cut(s) 242, 815
BsnI GGCC 3 cut(s) 290, 868, 985
Bso31I GGTCTC 1 cut(s) 767
BsoBI CYCGRG 2 cut(s) 599, 937
Bsp1286I GDGCHC 5 cut(s) 426, 491, 552, 600, 741
Bsp143I GATC 3 cut(s) 148, 163, 306
Bsp1720I GCTNAGC 2 cut(s) 35, 496
Bsp19I CCATGG 1 cut(s) 167
Bsp68I TCGCGA 1 cut(s) 253
BspANI GGCC 3 cut(s) 290, 868, 985
BspCNI CTCAG 6 cut(s) 27, 43, 509, 595, 927, 973
BspDI ATCGAT 1 cut(s) 147
BspFNI CGCG 2 cut(s) 253, 734
BspLI GGNNCC 4 cut(s) 116, 230, 706, 750
BspMAI CTGCAG 1 cut(s) 669
BspPI GGATC 1 cut(s) 158
BspQI GCTCTTC 2 cut(s) 479, 583
BspT107I GGYRCC 2 cut(s) 114, 748
BspTNI GGTCTC 1 cut(s) 767
BsrBI CCGCTC 1 cut(s) 909
BsrFI RCCGGY 2 cut(s) 269, 624
BsrI ACTGG 4 cut(s) 280, 287, 298, 725
BssAI RCCGGY 2 cut(s) 269, 624
BssECI CCNNGG 5 cut(s) 47, 167, 224, 641, 781
BssMI GATC 3 cut(s) 148, 163, 306
BssNI GRCGYC 1 cut(s) 749
BssSI CACGAG 1 cut(s) 404
BssT1I CCWWGG 2 cut(s) 167, 781
Bst2BI CACGAG 1 cut(s) 404
Bst2UI CCWGG 1 cut(s) 448
Bst4CI ACNGT 1 cut(s) 27
Bst6I CTCTTC 2 cut(s) 479, 583
BstACI GRCGYC 1 cut(s) 749
BstBAI YACGTR 1 cut(s) 856
BstC8I GCNNGC 3 cut(s) 41, 271, 683
BstDEI CTNAG 6 cut(s) 30, 35, 496, 582, 914, 960
BstDSI CCRYGG 1 cut(s) 167
BstF5I GGATG 2 cut(s) 460, 945
BstFNI CGCG 2 cut(s) 253, 734
BstH2I RGCGCY 1 cut(s) 752
BstHHI GCGC 1 cut(s) 751
BstKTI GATC 3 cut(s) 151, 166, 309
BstMAI GTCTC 3 cut(s) 33, 734, 767
BstMBI GATC 3 cut(s) 148, 163, 306
BstMCI CGRYCG 2 cut(s) 625, 869
BstMWI GCNNNNNNNGC 9 cut(s) 40, 438, 506, 509, 512, 540, 661, 670, 731
BstNI CCWGG 1 cut(s) 448
BstNSI RCATGY 1 cut(s) 826
BstSCI CCNGG 8 cut(s) 46, 446, 641, 707, 863, 920, 975, 985
BstSFI CTRYAG 1 cut(s) 665
BstUI CGCG 2 cut(s) 253, 734
BstV1I GCAGC 6 cut(s) 453, 512, 524, 651, 679, 682
BstV2I GAAGAC 1 cut(s) 890
BstZI CGGCCG 1 cut(s) 866
Bsu15I ATCGAT 1 cut(s) 147
BsuRI GGCC 3 cut(s) 290, 868, 985
BsuTUI ATCGAT 1 cut(s) 147
BtgI CCRYGG 1 cut(s) 167
BtsCI GGATG 2 cut(s) 460, 945
BtsIMutI CAGTG 3 cut(s) 23, 273, 291
BtuMI TCGCGA 1 cut(s) 253
Cac8I GCNNGC 3 cut(s) 41, 271, 683
CfoI GCGC 1 cut(s) 751
Cfr10I RCCGGY 2 cut(s) 269, 624
Cfr13I GGNCC 2 cut(s) 229, 984
ClaI ATCGAT 1 cut(s) 147
CseI GACGC 1 cut(s) 670
Csp6I GTAC 4 cut(s) 91, 115, 211, 280
CspAI ACCGGT 1 cut(s) 624
CviAII CATG 3 cut(s) 168, 573, 823
CviQI GTAC 4 cut(s) 91, 115, 211, 280
DdeI CTNAG 6 cut(s) 30, 35, 496, 582, 914, 960
DinI GGCGCC 1 cut(s) 750
DpnI GATC 3 cut(s) 150, 165, 308
DpnII GATC 3 cut(s) 148, 163, 306
DrdI GACNNNNNNGTC 1 cut(s) 827
DriI GACNNNNNGTC 1 cut(s) 25
DseDI GACNNNNNNGTC 1 cut(s) 827
EaeI YGGCCR 1 cut(s) 866
EagI CGGCCG 1 cut(s) 866
Eam1104I CTCTTC 2 cut(s) 479, 583
Eam1105I GACNNNNNGTC 1 cut(s) 25
EarI CTCTTC 2 cut(s) 479, 583
EciI GGCGGA 1 cut(s) 905
EclXI CGGCCG 1 cut(s) 866
Eco130I CCWWGG 2 cut(s) 167, 781
Eco24I GRGCYC 3 cut(s) 426, 600, 741
Eco31I GGTCTC 1 cut(s) 767
Eco32I GATATC 1 cut(s) 616
Eco47I GGWCC 1 cut(s) 229
Eco52I CGGCCG 1 cut(s) 866
Eco57I CTGAAG 1 cut(s) 339
Eco72I CACGTG 1 cut(s) 856
Eco88I CYCGRG 2 cut(s) 599, 937
EcoRII CCWGG 1 cut(s) 446
EcoRV GATATC 1 cut(s) 616
EcoT14I CCWWGG 2 cut(s) 167, 781
EcoT38I GRGCYC 3 cut(s) 426, 600, 741
EgeI GGCGCC 1 cut(s) 750
EheI GGCGCC 1 cut(s) 750
ErhI CCWWGG 2 cut(s) 167, 781
FaeI CATG 3 cut(s) 171, 576, 826
FaiI YATR 7 cut(s) 169, 191, 311, 360, 401, 574, 824
FaqI GGGAC 2 cut(s) 242, 815
FatI CATG 3 cut(s) 167, 572, 822
FauI CCCGC 3 cut(s) 727, 918, 983
FokI GGATG 2 cut(s) 467, 932
FriOI GRGCYC 3 cut(s) 426, 600, 741
GlaI GCGC 1 cut(s) 750
GsaI CCCAGC 1 cut(s) 114
GsuI CTGGAG 1 cut(s) 430
HaeII RGCGCY 1 cut(s) 752
HaeIII GGCC 3 cut(s) 290, 868, 985
HgaI GACGC 1 cut(s) 670
HhaI GCGC 1 cut(s) 751
Hin1I GRCGYC 1 cut(s) 749
Hin1II CATG 3 cut(s) 171, 576, 826
Hin6I GCGC 1 cut(s) 749
HinP1I GCGC 1 cut(s) 749
HindIII AAGCTT 1 cut(s) 683
HinfI GANTC 7 cut(s) 57, 521, 727, 775, 860, 912, 942
HphI GGTGA 3 cut(s) 209, 625, 770
Hpy166II GTNNAC 1 cut(s) 931
Hpy188I TCNGA 6 cut(s) 66, 225, 696, 774, 917, 963
Hpy188III TCNNGA 4 cut(s) 252, 385, 658, 939
Hpy8I GTNNAC 1 cut(s) 931
Hpy99I CGWCG 6 cut(s) 70, 568, 571, 593, 596, 623
HpyAV CCTTC 3 cut(s) 280, 314, 843
HpyCH4III ACNGT 1 cut(s) 27
HpyCH4IV ACGT 1 cut(s) 855
HpyCH4V TGCA 4 cut(s) 130, 403, 667, 904
HpyF10VI GCNNNNNNNGC 9 cut(s) 40, 438, 506, 509, 512, 540, 661, 670, 731
HpyF3I CTNAG 6 cut(s) 30, 35, 496, 582, 914, 960
HpySE526I ACGT 1 cut(s) 855
Hsp92I GRCGYC 1 cut(s) 749
Hsp92II CATG 3 cut(s) 171, 576, 826
HspAI GCGC 1 cut(s) 749
KasI GGCGCC 1 cut(s) 748
KpnI GGTACC 1 cut(s) 118
KroI GCCGGC 1 cut(s) 269
KroNI GCCGGC 1 cut(s) 271
Kzo9I GATC 3 cut(s) 148, 163, 306
LguI GCTCTTC 2 cut(s) 479, 583
LmnI GCTCC 2 cut(s) 76, 449
Lsp1109I GCAGC 6 cut(s) 453, 512, 524, 651, 679, 682
LweI GCATC 1 cut(s) 390
MaeII ACGT 1 cut(s) 855
MaeIII GTNAC 2 cut(s) 526, 971
MalI GATC 3 cut(s) 150, 165, 308
MbiI CCGCTC 1 cut(s) 909
MboI GATC 3 cut(s) 148, 163, 306
MboII GAAGA 4 cut(s) 496, 570, 622, 895
MfeI CAATTG 1 cut(s) 391
MhlI GDGCHC 5 cut(s) 426, 491, 552, 600, 741
MluCI AATT 7 cut(s) 119, 135, 391, 688, 712, 799, 805
Mly113I GGCGCC 1 cut(s) 749
MlyI GAGTC 4 cut(s) 530, 736, 769, 906
MmeI TCCRAC 2 cut(s) 89, 432
MnlI CCTC 9 cut(s) 67, 104, 219, 425, 436, 867, 886, 889, 892
MroNI GCCGGC 1 cut(s) 269
MseI TTAA 2 cut(s) 339, 687
MspA1I CMGCKG 2 cut(s) 34, 503
MspR9I CCNGG 8 cut(s) 48, 448, 643, 709, 865, 922, 977, 987
MunI CAATTG 1 cut(s) 391
MvaI CCWGG 1 cut(s) 448
MvnI CGCG 2 cut(s) 253, 734
MwoI GCNNNNNNNGC 9 cut(s) 40, 438, 506, 509, 512, 540, 661, 670, 731
NaeI GCCGGC 1 cut(s) 271
NarI GGCGCC 1 cut(s) 749
NciI CCSGG 7 cut(s) 48, 643, 709, 865, 922, 977, 987
NcoI CCATGG 1 cut(s) 167
NdeII GATC 3 cut(s) 148, 163, 306
NgoMIV GCCGGC 1 cut(s) 269
NlaIII CATG 3 cut(s) 171, 576, 826
NlaIV GGNNCC 4 cut(s) 116, 230, 706, 750
NmeAIII GCCGAG 1 cut(s) 725
NruI TCGCGA 1 cut(s) 253
NspI RCATGY 1 cut(s) 826
PaeR7I CTCGAG 1 cut(s) 599
PciI ACATGT 1 cut(s) 822
PciSI GCTCTTC 2 cut(s) 479, 583
PcsI WCGNNNNNNNCGW 1 cut(s) 597
PdiI GCCGGC 1 cut(s) 271
PfeI GAWTC 3 cut(s) 57, 860, 942
PfoI TCCNGGA 1 cut(s) 707
PinAI ACCGGT 1 cut(s) 624
PleI GAGTC 4 cut(s) 529, 735, 769, 906
PluTI GGCGCC 1 cut(s) 752
PmaCI CACGTG 1 cut(s) 856
PmlI CACGTG 1 cut(s) 856
PpsI GAGTC 4 cut(s) 529, 735, 769, 906
Ppu21I YACGTR 1 cut(s) 856
PscI ACATGT 1 cut(s) 822
Psp6I CCWGG 1 cut(s) 446
PspCI CACGTG 1 cut(s) 856
PspFI CCCAGC 1 cut(s) 110
PspGI CCWGG 1 cut(s) 446
PspN4I GGNNCC 4 cut(s) 116, 230, 706, 750
PspPI GGNCC 2 cut(s) 229, 984
PspXI VCTCGAGB 1 cut(s) 599
PstI CTGCAG 1 cut(s) 669
PvuII CAGCTG 1 cut(s) 34
RruI TCGCGA 1 cut(s) 253
RsaI GTAC 4 cut(s) 92, 116, 212, 281
RsaNI GTAC 4 cut(s) 91, 115, 211, 280
SapI GCTCTTC 2 cut(s) 479, 583
SaqAI TTAA 2 cut(s) 339, 687
Sau3AI GATC 3 cut(s) 148, 163, 306
Sau96I GGNCC 2 cut(s) 229, 984
SchI GAGTC 4 cut(s) 530, 736, 769, 906
ScrFI CCNGG 8 cut(s) 48, 448, 643, 709, 865, 922, 977, 987
SduI GDGCHC 5 cut(s) 426, 491, 552, 600, 741
SfaNI GCATC 1 cut(s) 390
SfcI CTRYAG 1 cut(s) 665
SfoI GGCGCC 1 cut(s) 750
Sfr274I CTCGAG 1 cut(s) 599
SinI GGWCC 1 cut(s) 229
SlaI CTCGAG 1 cut(s) 599
SmlI CTYRAG 2 cut(s) 599, 656
SmoI CTYRAG 2 cut(s) 599, 656
Sse9I AATT 7 cut(s) 119, 135, 391, 688, 712, 799, 805
SspDI GGCGCC 1 cut(s) 748
StyD4I CCNGG 8 cut(s) 46, 446, 641, 707, 863, 920, 975, 985
StyI CCWWGG 2 cut(s) 167, 781
TaaI ACNGT 1 cut(s) 27
TaiI ACGT 1 cut(s) 858
TaqI TCGA 8 cut(s) 55, 147, 162, 420, 588, 600, 618, 717
TaqII GACCGA 1 cut(s) 749
TasI AATT 7 cut(s) 119, 135, 391, 688, 712, 799, 805
TauI GCSGC 5 cut(s) 46, 102, 506, 509, 512
TfiI GAWTC 3 cut(s) 57, 860, 942
Tru1I TTAA 2 cut(s) 339, 687
Tru9I TTAA 2 cut(s) 339, 687
TscAI CASTG 3 cut(s) 30, 280, 298
TseI GCWGC 6 cut(s) 441, 500, 512, 664, 667, 670
TspDTI ATGAA 3 cut(s) 471, 812, 934
TspGWI ACGGA 2 cut(s) 83, 514
TspRI CASTG 3 cut(s) 30, 280, 298
VpaK11BI GGWCC 1 cut(s) 229
XapI RAATTY 2 cut(s) 712, 799
XceI RCATGY 1 cut(s) 826
XhoI CTCGAG 1 cut(s) 599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.