Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0011689

Physical Location & Seq

Genomic Coordinates Forward (+)

24626031 .. 24629496

Gene Structure 3466 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g21450.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2469 bp

ATGGAATTAAATGAAGTGCATAAGGTCAAAGGGGTAAGGGACAACAACATTCACCTTTTACTAGTGTCGACCAAGGATTCCAATATTGGTCATTCGGCCACTGATTGCATTGTATGTAGCACCGGATCCCTGGCATTTTCAAAACCAATGAATAAGCTTGTGTTGACTAAGGAATTCAGAAATCAGATACATAATTCCGCAGTTTTTAGTAGACTTTACTTACCGAGACTGTTCGGGTGGATCATGATACCGAGACTGTTCAGGTGGATCAAGAGAGTCGAGATTGTGTGCCAATCTAGTGGGCATCTAACCCGGGCCCCTGATCAAGCTTTTGCGTCACTACAAATGTTCTCAATTTTGAACAACTTTTTCATTTGCTTAGAACACAATCACATGATATTATTACTCCACTCATATCTTCCTCCTACACTTCCACATACCAGTACTTCTAGCTTCTTCTTTAGTTCCTTCATTTTTGGGAGTAGTATTACAACTTCAGCAACCACCATGGAGTATAATGTCGAATCAACAGAAACTCTGAGGTTATCTTTCTCTCTCTCTCTCTCTCAACACATACAGAAATATCACTGCATTCACATTTCTTTCAGCTTAATTAAGTTCAGGAACAAGTGTGCAGCATGCTATCGACAATTCAATAGAATCAAGCACTTAGTGGAGCACATGAGAACCTCATACCACTCAGCTCATGAACCCATGTGTGGAATTTGTAAGAAGCATTGCAGATATTTTGAATCTCTCAGGGAATATCTTATAGCCAAGTTGACTATAAACTGTGTTTTCCTCTTTCTGCATCCAAGTTCAAATCCTTCTCTTCAAAACATCTATTATTTCTATTTTCAGGGCCATTTGCCAAAACAAGAATGCAGAAATATATTCAGCACCAGAGGATGCAAAATTTGCTTAGCCATCCTCGAAAGCCCGTATGCTCTTAGGGTTCGCCAGGACAGATGCCAACTCTCTGGTGGCAATGCTGTATTAATCCGCACATACTACCTTATTAATCATGAACTTTTTAATACATGTCAGGGATTACTTGGTCGCTTTGCTAATCTGGGCATTCGTGACAATACTGAAAGTGGTAGCACAAGAGACACTCAAGTTGTTGCACTTGCTTGCAAAATGGTTGCTGGAGGCAGCGATGGCTCCCTAGATCTCTGCGCAAATGTCTGCCTCACTGATGAATATGACAACATCATCTTTCAGTCTTATGTCAAGCCACTGATTCCAGTCACAAACTATAGGTATATATCGTATATATGTAGGGGAGTGATTTCAGGGTTATTTCTGATTAAAGATGTCGTTCGATTGAACGGGTTCATTTTTATATACATTTTTGAGACCGATCATTTTGCTTCATACTTGTATATATACAGGTATGATACTACTGGTATTCGCCCTGAATACTTGAGGGATGCAATCCCTTTGAGGCAAGTGCGAAAGAAGATCAAGACTTCCTCTGCAATGGGGAACCAATGTGGAAGATTCGACTCCGAAGTGCACAATGACTATTTTAAAATAGGATCACATATATACACATACAACTTTCCATTGCGAATTTCAATTACAGCAAAATATCCTCCATTGATGAAATCAAGCAAGCTCAGCAACTTCCTCAAGTATCTCACACAAGCATATCTTGGGCAAGTACCCAACCCTGCTATTAGCAATTTTACATATAATCTATATAGGTATGACATTCAAACAGGCATTCAAGATCCTTATGAGGATTGTGTTGCAACAATGAAGATCTACAAGAGAATGAGATCCCAAGTTCACAAAGTAGAGGCCTACCCGCTCGCTTCTGACACTCAAAACAGGAATAACCTCGCGACGTGGCGCCAAAATGAGCTTGAGAAGATGAGACCAGATCAAATGATGGAAATGGTGGCTGAAAGTGAAAGTAGGCACCTAGGGATGGACAACAGTTATTTACCCATAACCGTTTATGCTCATACCCGCACAACCGTTTATCCGTTAGGTAATTGCCTAAACAGTTATACTCATACCCATAACCTTAATCGTAACCGTTTAATACTCATTTGCCCATTTACCCTTTTTAAATCCGTTTATCTTCTTCTTCTTCTTTTTTTGTTTTTTGTTTTTGTTTTTTTTTTTTTTTTACCATTACCCCTTTTTCACCCTTTTTTTTTGACAATTAAACACTGTTATACATTTCCGTATTTTAATTTTTTAATTTTAAATGTTACCAATGAAGGTAATATAATATTTGCTAAGTATTATTGGGTTACGAAAATTGTTTCGAAGACATTTCAGTCAATTTCACGATTACCCAATCATCATTCCTATAGCAGTGTTATTGAGAGAATGACCGATGAATTCCTTGCTAATTTATTGGGTGCTAAGTATTATTGGACCGAGAACATGGTTTTGCGATTAATACCCATAACCATCCATTTAAATTTCACGGGTAAACGGTTATACCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000027 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008408 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0016787 GO:0016788 GO:0022607 GO:0022613 GO:0022618 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042254 GO:0042255 GO:0042273 GO:0043170 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0046483 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNase_T

Protein Analysis

823

Amino Acids

95.66

Weight (kDa)

9.27

Isoelectric Point (pI)

35.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011689)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27970 AT5G40310 AT5G40310
fragaria_vesca	FvH4_6g50710
malus_domestica	MD00G1089900.v1.1 MD00G1186700.v1.1
prunus_persica	Prupe.3G285000_v2.0.a1 Prupe.3G285000_v2.0.a1
pyrus_communis	pycom11g21450
rosa_chinensis	RchiOBHm_Chr2g0171511
rosa_laevigata	RLG00000022021
rosa_roxburghii	Rroxscaffold_2G00080580
rosa_rugosa	Rorug02G0554800
rosa_samantha	Rh2AG629200 Rh2BG639800 Rh2CG608300 Rh2DG650600 Rh2DG656300
rosa_wichuraiana	Rw2G052120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2293
Acc16I	TGCGCA	1 cut(s)	1180
AccB1I	GGYRCC	2 cut(s)	1857, 1926
AccBSI	CCGCTC	1 cut(s)	1816
AccI	GTMKAC	2 cut(s)	68, 211
AccII	CGCG	1 cut(s)	1850
AciI	CCGC	4 cut(s)	198, 1003, 1814, 1978
AclWI	GGATC	7 cut(s)	120, 133, 248, 275, 1549, 1730, 1779
AcoI	YGGCCR	1 cut(s)	96
AcsI	RAATTY	6 cut(s)	173, 723, 915, 1575, 2357, 2440
AcuI	CTGAAG	1 cut(s)	480
AcyI	GRCGYC	1 cut(s)	1858
AdeI	CACNNNGTG	1 cut(s)	673
AfaI	GTAC	2 cut(s)	445, 1668
AfiI	CCNNNNNNNGG	2 cut(s)	719, 1936
AflIII	ACRYGT	1 cut(s)	1040
AhlI	ACTAGT	1 cut(s)	61
AjiI	CACGTC	1 cut(s)	1854
AjnI	CCWGG	2 cut(s)	129, 960
AluBI	AGCT	7 cut(s)	157, 329, 453, 609, 704, 1621, 1870
AluI	AGCT	7 cut(s)	157, 329, 453, 609, 704, 1621, 1870
Alw21I	GWGCWC	2 cut(s)	681, 1521
Alw26I	GTCTC	5 cut(s)	220, 247, 1104, 1352, 1876
Alw44I	GTGCAC	1 cut(s)	1517
AlwI	GGATC	7 cut(s)	120, 133, 248, 275, 1549, 1730, 1779
Ama87I	CYCGRG	1 cut(s)	312
AoxI	GGCC	4 cut(s)	96, 315, 862, 1806
ApaI	GGGCCC	1 cut(s)	319
ApaLI	GTGCAC	1 cut(s)	1517
ApeKI	GCWGC	2 cut(s)	635, 1155
ApoI	RAATTY	6 cut(s)	173, 723, 915, 1575, 2357, 2440
AseI	ATTAAT	3 cut(s)	998, 1020, 2417
Asp700I	GAANNNNTTC	1 cut(s)	1334
AspA2I	CCTAGG	1 cut(s)	1930
AspLEI	GCGC	2 cut(s)	1181, 1860
AspS9I	GGNCC	4 cut(s)	315, 316, 862, 2394
AsuC2I	CCSGG	2 cut(s)	313, 314
AsuHPI	GGTGA	2 cut(s)	44, 2150
AsuII	TTCGAA	1 cut(s)	2282
AvaI	CYCGRG	1 cut(s)	312
AvaII	GGWCC	1 cut(s)	2394
AvrII	CCTAGG	1 cut(s)	1930
BaeGI	GKGCMC	2 cut(s)	319, 1521
BamHI	GGATCC	1 cut(s)	125
BanI	GGYRCC	2 cut(s)	1857, 1926
BanII	GRGCYC	1 cut(s)	319
BarI	GAAGNNNNNNTAC	2 cut(s)	478, 510
BbsI	GAAGAC	1 cut(s)	2291
Bbv12I	GWGCWC	2 cut(s)	681, 1521
BbvI	GCAGC	2 cut(s)	647, 1167
BccI	CCATC	5 cut(s)	935, 1154, 1891, 1930, 2438
BcgI	CGANNNNNNTGC	2 cut(s)	1352, 1386
BciT130I	CCWGG	2 cut(s)	131, 962
BclI	TGATCA	1 cut(s)	322
BcnI	CCSGG	2 cut(s)	313, 314
BcoDI	GTCTC	5 cut(s)	220, 247, 1104, 1352, 1876
BcuI	ACTAGT	1 cut(s)	61
BfaI	CTAG	5 cut(s)	62, 297, 450, 1169, 1931
BfmI	CTRYAG	2 cut(s)	1258, 2326
BfoI	RGCGCY	1 cut(s)	1861
BglII	AGATCT	2 cut(s)	1171, 1767
BisI	GCNGC	2 cut(s)	636, 1156
BlnI	CCTAGG	1 cut(s)	1930
BlpI	GCTNAGC	2 cut(s)	922, 1622
BlsI	GCNGC	2 cut(s)	637, 1157
BmcAI	AGTACT	1 cut(s)	445
Bme1390I	CCNGG	4 cut(s)	131, 313, 314, 962
Bme18I	GGWCC	1 cut(s)	2394
BmeT110I	CYCGRG	1 cut(s)	312
BmgBI	CACGTC	1 cut(s)	1854
BmgT120I	GGNCC	4 cut(s)	315, 316, 862, 2394
BmiI	GGNNCC	7 cut(s)	127, 317, 318, 1165, 1490, 1859, 1928
BmrFI	CCNGG	4 cut(s)	131, 313, 314, 962
BmsI	GCATC	5 cut(s)	313, 820, 899, 959, 1423
BpiI	GAAGAC	1 cut(s)	2291
BpmI	CTGGAG	1 cut(s)	1170
Bpu1102I	GCTNAGC	2 cut(s)	922, 1622
Bpu14I	TTCGAA	1 cut(s)	2282
BpuEI	CTTGAG	4 cut(s)	1101, 1447, 1619, 1892
BpuMI	CCSGG	2 cut(s)	313, 314
BsaHI	GRCGYC	1 cut(s)	1858
BsaI	GGTCTC	2 cut(s)	1352, 1876
BsaJI	CCNNGG	5 cut(s)	72, 129, 312, 507, 1930
BsaWI	WCCGGW	1 cut(s)	122
Bsc4I	CCNNNNNNNGG	2 cut(s)	719, 1936
Bse1I	ACTGG	3 cut(s)	441, 1247, 1411
Bse3DI	GCAATG	4 cut(s)	736, 994, 1488, 1568
BseBI	CCWGG	2 cut(s)	131, 962
BseDI	CCNNGG	5 cut(s)	72, 129, 312, 507, 1930
BseGI	GGATG	6 cut(s)	811, 914, 927, 1438, 1941, 2430
BseLI	CCNNNNNNNGG	2 cut(s)	719, 1936
BseMI	GCAATG	4 cut(s)	736, 994, 1488, 1568
BseMII	CTCAG	4 cut(s)	530, 714, 772, 1636
BseNI	ACTGG	3 cut(s)	441, 1247, 1411
BseSI	GKGCMC	2 cut(s)	319, 1521
BseXI	GCAGC	2 cut(s)	647, 1167
BsgI	GTGCAG	1 cut(s)	654
Bsh1236I	CGCG	1 cut(s)	1850
BshFI	GGCC	4 cut(s)	98, 317, 864, 1808
BshNI	GGYRCC	2 cut(s)	1857, 1926
BsiHKAI	GWGCWC	2 cut(s)	681, 1521
BsiHKCI	CYCGRG	1 cut(s)	312
BsiSI	CCGG	2 cut(s)	123, 313
BslFI	GGGAC	1 cut(s)	53
BslI	CCNNNNNNNGG	2 cut(s)	719, 1936
BsmAI	GTCTC	5 cut(s)	220, 247, 1104, 1352, 1876
BsmFI	GGGAC	1 cut(s)	53
BsmI	GAATGC	4 cut(s)	591, 887, 1077, 1728
BsnI	GGCC	4 cut(s)	98, 317, 864, 1808
Bso31I	GGTCTC	2 cut(s)	1352, 1876
BsoBI	CYCGRG	1 cut(s)	312
Bsp119I	TTCGAA	1 cut(s)	2282
Bsp120I	GGGCCC	1 cut(s)	315
Bsp1286I	GDGCHC	3 cut(s)	319, 681, 1521
Bsp1720I	GCTNAGC	2 cut(s)	922, 1622
Bsp19I	CCATGG	1 cut(s)	507
Bsp68I	TCGCGA	1 cut(s)	1850
BspACI	CCGC	4 cut(s)	198, 1003, 1814, 1978
BspANI	GGCC	4 cut(s)	98, 317, 864, 1808
BspCNI	CTCAG	4 cut(s)	531, 713, 771, 1635
BspFNI	CGCG	1 cut(s)	1850
BspHI	TCATGA	3 cut(s)	243, 706, 1024
BspLI	GGNNCC	7 cut(s)	127, 317, 318, 1165, 1490, 1859, 1928
BspPI	GGATC	7 cut(s)	120, 133, 248, 275, 1549, 1730, 1779
BspT104I	TTCGAA	1 cut(s)	2282
BspT107I	GGYRCC	2 cut(s)	1857, 1926
BspTNI	GGTCTC	2 cut(s)	1352, 1876
BsrBI	CCGCTC	1 cut(s)	1816
BsrDI	GCAATG	4 cut(s)	736, 994, 1488, 1568
BsrI	ACTGG	3 cut(s)	441, 1247, 1411
BssECI	CCNNGG	5 cut(s)	72, 129, 312, 507, 1930
BssNI	GRCGYC	1 cut(s)	1858
BssT1I	CCWWGG	3 cut(s)	72, 507, 1930
Bst2UI	CCWGG	2 cut(s)	131, 962
Bst6I	CTCTTC	1 cut(s)	837
BstACI	GRCGYC	1 cut(s)	1858
BstAPI	GCANNNNNTGC	1 cut(s)	918
BstBI	TTCGAA	1 cut(s)	2282
BstC8I	GCNNGC	4 cut(s)	640, 1135, 1619, 1818
BstDSI	CCRYGG	1 cut(s)	507
BstF5I	GGATG	6 cut(s)	811, 914, 927, 1438, 1941, 2430
BstFNI	CGCG	1 cut(s)	1850
BstH2I	RGCGCY	1 cut(s)	1861
BstHHI	GCGC	2 cut(s)	1181, 1860
BstMAI	GTCTC	5 cut(s)	220, 247, 1104, 1352, 1876
BstMWI	GCNNNNNNNGC	3 cut(s)	918, 1161, 1623
BstNI	CCWGG	2 cut(s)	131, 962
BstNSI	RCATGY	2 cut(s)	642, 1044
BstSCI	CCNGG	4 cut(s)	129, 311, 312, 960
BstSFI	CTRYAG	2 cut(s)	1258, 2326
BstSLI	GKGCMC	2 cut(s)	319, 1521
BstUI	CGCG	1 cut(s)	1850
BstV1I	GCAGC	2 cut(s)	647, 1167
BstV2I	GAAGAC	1 cut(s)	2291
BstX2I	RGATCY	5 cut(s)	125, 1171, 1735, 1767, 1784
BstXI	CCANNNNNNTGG	2 cut(s)	299, 980
BstYI	RGATCY	5 cut(s)	125, 1171, 1735, 1767, 1784
BsuRI	GGCC	4 cut(s)	98, 317, 864, 1808
BtgI	CCRYGG	1 cut(s)	507
BtgZI	GCGATG	1 cut(s)	1173
BtrI	CACGTC	1 cut(s)	1854
BtsCI	GGATG	6 cut(s)	811, 914, 927, 1438, 1941, 2430
BtsI	GCAGTG	2 cut(s)	586, 2338
BtsIMutI	CAGTG	6 cut(s)	99, 586, 1194, 1238, 2182, 2338
BtuMI	TCGCGA	1 cut(s)	1850
Cac8I	GCNNGC	4 cut(s)	640, 1135, 1619, 1818
CciI	TCATGA	3 cut(s)	243, 706, 1024
CfoI	GCGC	2 cut(s)	1181, 1860
Cfr13I	GGNCC	4 cut(s)	315, 316, 862, 2394
Cfr9I	CCCGGG	1 cut(s)	312
CseI	GACGC	1 cut(s)	324
Csp6I	GTAC	2 cut(s)	444, 1667
CviQI	GTAC	2 cut(s)	444, 1667
DinI	GGCGCC	1 cut(s)	1859
DraI	TTTAAA	4 cut(s)	1534, 2080, 2220, 2439
DraIII	CACNNNGTG	1 cut(s)	673
DrdI	GACNNNNNNGTC	1 cut(s)	2293
DseDI	GACNNNNNNGTC	1 cut(s)	2293
EaeI	YGGCCR	1 cut(s)	96
Eam1104I	CTCTTC	1 cut(s)	837
EarI	CTCTTC	1 cut(s)	837
Eco130I	CCWWGG	3 cut(s)	72, 507, 1930
Eco147I	AGGCCT	1 cut(s)	1808
Eco24I	GRGCYC	1 cut(s)	319
Eco31I	GGTCTC	2 cut(s)	1352, 1876
Eco47I	GGWCC	1 cut(s)	2394
Eco57I	CTGAAG	1 cut(s)	480
Eco88I	CYCGRG	1 cut(s)	312
EcoO109I	RGGNCCY	1 cut(s)	316
EcoRI	GAATTC	2 cut(s)	173, 2357
EcoRII	CCWGG	2 cut(s)	129, 960
EcoT14I	CCWWGG	3 cut(s)	72, 507, 1930
EcoT38I	GRGCYC	1 cut(s)	319
EgeI	GGCGCC	1 cut(s)	1859
EheI	GGCGCC	1 cut(s)	1859
ErhI	CCWWGG	3 cut(s)	72, 507, 1930
FalI	AAGNNNNNCTT	2 cut(s)	1641, 1673
FaqI	GGGAC	1 cut(s)	53
FauI	CCCGC	2 cut(s)	1821, 1985
FbaI	TGATCA	1 cut(s)	322
FblI	GTMKAC	2 cut(s)	68, 211
Fnu4HI	GCNGC	2 cut(s)	636, 1156
FokI	GGATG	6 cut(s)	798, 914, 921, 1445, 1948, 2417
FriOI	GRGCYC	1 cut(s)	319
Fsp4HI	GCNGC	2 cut(s)	636, 1156
FspBI	CTAG	5 cut(s)	62, 297, 450, 1169, 1931
FspI	TGCGCA	1 cut(s)	1180
GlaI	GCGC	2 cut(s)	1180, 1859
GluI	GCNGC	2 cut(s)	636, 1156
GsuI	CTGGAG	1 cut(s)	1170
HaeII	RGCGCY	1 cut(s)	1861
HaeIII	GGCC	4 cut(s)	98, 317, 864, 1808
HapII	CCGG	2 cut(s)	123, 313
HgaI	GACGC	1 cut(s)	324
HhaI	GCGC	2 cut(s)	1181, 1860
Hin1I	GRCGYC	1 cut(s)	1858
Hin6I	GCGC	2 cut(s)	1179, 1858
HinP1I	GCGC	2 cut(s)	1179, 1858
HincII	GTYRAC	3 cut(s)	69, 165, 783
HindII	GTYRAC	3 cut(s)	69, 165, 783
HindIII	AAGCTT	2 cut(s)	155, 327
HinfI	GANTC	8 cut(s)	77, 276, 524, 660, 752, 1243, 1503, 1508
HpaII	CCGG	2 cut(s)	123, 313
HphI	GGTGA	2 cut(s)	44, 2150
Hpy166II	GTNNAC	7 cut(s)	69, 165, 212, 783, 1519, 1795, 2453
Hpy188I	TCNGA	6 cut(s)	179, 186, 540, 1308, 1513, 1825
Hpy8I	GTNNAC	7 cut(s)	69, 165, 212, 783, 1519, 1795, 2453
Hpy99I	CGWCG	1 cut(s)	1855
HpyAV	CCTTC	3 cut(s)	478, 837, 2228
HpyCH4IV	ACGT	1 cut(s)	1853
HpyF10VI	GCNNNNNNNGC	3 cut(s)	918, 1161, 1623
HpySE526I	ACGT	1 cut(s)	1853
Hsp92I	GRCGYC	1 cut(s)	1858
HspAI	GCGC	2 cut(s)	1179, 1858
KasI	GGCGCC	1 cut(s)	1857
Ksp22I	TGATCA	1 cut(s)	322
LmnI	GCTCC	2 cut(s)	676, 1169
Lsp1109I	GCAGC	2 cut(s)	647, 1167
LweI	GCATC	5 cut(s)	313, 820, 899, 959, 1423
MaeI	CTAG	5 cut(s)	62, 297, 450, 1169, 1931
MaeII	ACGT	1 cut(s)	1853
MaeIII	GTNAC	6 cut(s)	336, 1082, 1249, 2042, 2224, 2266
MbiI	CCGCTC	1 cut(s)	1816
MflI	RGATCY	5 cut(s)	125, 1171, 1735, 1767, 1784
MhlI	GDGCHC	3 cut(s)	319, 681, 1521
Mly113I	GGCGCC	1 cut(s)	1858
MlyI	GAGTC	2 cut(s)	285, 1502
MroXI	GAANNNNTTC	1 cut(s)	1334
MspI	CCGG	2 cut(s)	123, 313
MspR9I	CCNGG	4 cut(s)	131, 313, 314, 962
Mva1269I	GAATGC	4 cut(s)	591, 887, 1077, 1728
MvaI	CCWGG	2 cut(s)	131, 962
MvnI	CGCG	1 cut(s)	1850
MwoI	GCNNNNNNNGC	3 cut(s)	918, 1161, 1623
NarI	GGCGCC	1 cut(s)	1858
NciI	CCSGG	2 cut(s)	313, 314
NcoI	CCATGG	1 cut(s)	507
NlaIV	GGNNCC	7 cut(s)	127, 317, 318, 1165, 1490, 1859, 1928
NmuCI	GTSAC	3 cut(s)	336, 1082, 1249
NruI	TCGCGA	1 cut(s)	1850
NsbI	TGCGCA	1 cut(s)	1180
NspI	RCATGY	2 cut(s)	642, 1044
NspV	TTCGAA	1 cut(s)	2282
PacI	TTAATTAA	1 cut(s)	615
PaeI	GCATGC	1 cut(s)	642
PagI	TCATGA	3 cut(s)	243, 706, 1024
PceI	AGGCCT	1 cut(s)	1808
PciI	ACATGT	1 cut(s)	1040
PctI	GAATGC	4 cut(s)	591, 887, 1077, 1728
PdmI	GAANNNNTTC	1 cut(s)	1334
PfeI	GAWTC	6 cut(s)	77, 524, 660, 752, 1243, 1503
PkrI	GCNGC	2 cut(s)	637, 1157
PleI	GAGTC	2 cut(s)	284, 1502
PluTI	GGCGCC	1 cut(s)	1861
PpsI	GAGTC	2 cut(s)	284, 1502
PscI	ACATGT	1 cut(s)	1040
PshBI	ATTAAT	3 cut(s)	998, 1020, 2417
Psp6I	CCWGG	2 cut(s)	129, 960
PspGI	CCWGG	2 cut(s)	129, 960
PspN4I	GGNNCC	7 cut(s)	127, 317, 318, 1165, 1490, 1859, 1928
PspOMI	GGGCCC	1 cut(s)	315
PspPI	GGNCC	4 cut(s)	315, 316, 862, 2394
PsuI	RGATCY	5 cut(s)	125, 1171, 1735, 1767, 1784
RruI	TCGCGA	1 cut(s)	1850
RsaI	GTAC	2 cut(s)	445, 1668
RsaNI	GTAC	2 cut(s)	444, 1667
SalI	GTCGAC	1 cut(s)	67
SatI	GCNGC	2 cut(s)	636, 1156
Sau96I	GGNCC	4 cut(s)	315, 316, 862, 2394
ScaI	AGTACT	1 cut(s)	445
SchI	GAGTC	2 cut(s)	285, 1502
ScrFI	CCNGG	4 cut(s)	131, 313, 314, 962
SduI	GDGCHC	3 cut(s)	319, 681, 1521
SfaNI	GCATC	5 cut(s)	313, 820, 899, 959, 1423
SfcI	CTRYAG	2 cut(s)	1258, 2326
SfoI	GGCGCC	1 cut(s)	1859
SfuI	TTCGAA	1 cut(s)	2282
SinI	GGWCC	1 cut(s)	2394
SmaI	CCCGGG	1 cut(s)	314
SmiI	ATTTAAAT	1 cut(s)	2439
SmlI	CTYRAG	4 cut(s)	1116, 1426, 1634, 1871
SmoI	CTYRAG	4 cut(s)	1116, 1426, 1634, 1871
SpeI	ACTAGT	1 cut(s)	61
SphI	GCATGC	1 cut(s)	642
SseBI	AGGCCT	1 cut(s)	1808
SsiI	CCGC	4 cut(s)	198, 1003, 1814, 1978
SspDI	GGCGCC	1 cut(s)	1857
SspI	AATATT	2 cut(s)	85, 2247
SspMI	CTAG	5 cut(s)	62, 297, 450, 1169, 1931
StuI	AGGCCT	1 cut(s)	1808
StyD4I	CCNGG	4 cut(s)	129, 311, 312, 960
StyI	CCWWGG	3 cut(s)	72, 507, 1930
SwaI	ATTTAAAT	1 cut(s)	2439
TaiI	ACGT	1 cut(s)	1856
TaqI	TCGA	8 cut(s)	68, 279, 522, 646, 933, 1324, 1506, 2282
TaqII	GACCGA	3 cut(s)	1376, 2366, 2411
TatI	WGTACW	1 cut(s)	443
TfiI	GAWTC	6 cut(s)	77, 524, 660, 752, 1243, 1503
TscAI	CASTG	6 cut(s)	106, 593, 1201, 1245, 2189, 2338
TseFI	GTSAC	3 cut(s)	336, 1082, 1249
TseI	GCWGC	2 cut(s)	635, 1155
Tsp45I	GTSAC	3 cut(s)	336, 1082, 1249
TspGWI	ACGGA	3 cut(s)	1983, 2074, 2187
TspMI	CCCGGG	1 cut(s)	312
TspRI	CASTG	6 cut(s)	106, 593, 1201, 1245, 2189, 2338
VneI	GTGCAC	1 cut(s)	1517
VpaK11BI	GGWCC	1 cut(s)	2394
VspI	ATTAAT	3 cut(s)	998, 1020, 2417
XapI	RAATTY	6 cut(s)	173, 723, 915, 1575, 2357, 2440
XceI	RCATGY	2 cut(s)	642, 1044
XcmI	CCANNNNNNNNNTGG	1 cut(s)	980
XmaI	CCCGGG	1 cut(s)	312
XmaJI	CCTAGG	1 cut(s)	1930
XmiI	GTMKAC	2 cut(s)	68, 211
XmnI	GAANNNNTTC	1 cut(s)	1334
XspI	CTAG	5 cut(s)	62, 297, 450, 1169, 1931
ZrmI	AGTACT	1 cut(s)	445

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.