pycom11g22570

Aminotransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
25593009 .. 25595720
2712 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g22570.6

Sequence Viewer

Length: 1215 bp
ATGGAAAACCGCACCTCGAACCTCCAAGCTGCACCAGTGGACACTACTTGTTCGACAATCACCATCAAAGGCATCCTCAGCTTGCTGCTGCAGAATGTCGACGAAAACGACGGCAGACGGCTGATTTCTTTGGGCATGGGCGACCCGACTGCCTTCTCTTGCTTCCACACGACGCATGTTTCGCAGGAAGCTGTAGTCGACGCCCTCCAGTCCGACAAGTTCAATGGCTATGCACCCACTGTTGGTCTTCCTCAAACCAGAAGAGCAATTGCTGAGTATCTGTCTCGTGATCTTCCATACAAGTTAACATCTGATGATGTTTTTGTCACATCTGGTTGCACACAAGCCATTGATGTCGCGTTGGCAATGCTTGCTCGCCCCGGTGCCAATATCTTGCTTCCAAAGCCATGCTTCCCTATTTATGAACTTTGTTCTGCTTTTAGACATCTTGAAATTCGACATTTCGATCTCCTGCAAGAGAATGCATGGGAGGTTGACCTTGATGCTGTTGAAGCTCTTGCAGATCACAACACAGTTGCAATGGTAATTATAAACCCCGGGAATCCTTGTGGGAATGTGTACAGTTACCAACATCTGGAGAAGGTTAGTGTCTATGTTTATGGGCATCTTGCTTTTGGGGATAAACCATTTGTGCCAATGGGAATTTTTGGATCAACTGTTCCGGTTCTTACTCTCGGGTCCCTGTCAAAGAGATGGATAGTTCCTGGATGGCGACTTGGTTGGTTTGTGACGACTGATCCATGTGGCATGTTTAGAATACCCAAGGTTATTGAGCGCATCAAGAAGTATTTTGACATCTTGGGAGGGCCTGCAACTTTCATTCAGGCAGCAGTTCCTCGCATCCTTCAACAAACCGAAGAGGCTTTCTTCAAGAAAACTCTCCATTTGCTGAAGCAGTCCTCAGACATTTGCTGTGATAGGATAAATGAGATCCCTTGTCTTACCTGTCCCAGCAAACCAGAAGGATCCATGGCCGTAATGGTGAAATTAGACCTTTCGCTACTGGAAGATATCAATGATGATATTGAGTTTTGTTTCAAGCTCGTCAAAGAGGAAAGCGTTATCTTTCTTCCAGGAACAGCAGTAGGGCTGACCAGTTGGATACGCGTTACATTTGCTGCTGATCCATCTTCCATTGAAGAAGCTTTGAGGAGGACAAAGTCTTTCTACCAAAGGCATGCCAGAAAATTATAG

Protein Analysis

405

Amino Acids

44.94

Weight (kDa)

5.89

Isoelectric Point (pI)

43.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 551
AccB1I GGYRCC 1 cut(s) 383
AccB7I CCANNNNNTGG 1 cut(s) 595
AccI GTMKAC 2 cut(s) 99, 198
AccII CGCG 2 cut(s) 359, 1128
AciI CCGC 1 cut(s) 10
AclWI GGATC 6 cut(s) 679, 752, 946, 981, 994, 1139
AcoI YGGCCR 1 cut(s) 993
AcsI RAATTY 2 cut(s) 453, 663
AcuI CTGAAG 1 cut(s) 932
AcyI GRCGYC 1 cut(s) 201
AfaI GTAC 1 cut(s) 581
AfiI CCNNNNNNNGG 2 cut(s) 242, 595
AflIII ACRYGT 1 cut(s) 1126
AgsI TTSAA 7 cut(s) 223, 452, 512, 869, 892, 1060, 1160
AjnI CCWGG 2 cut(s) 724, 1093
AloI GAACNNNNNNTCC 2 cut(s) 663, 695
AluBI AGCT 6 cut(s) 29, 81, 191, 515, 1063, 1166
AluI AGCT 6 cut(s) 29, 81, 191, 515, 1063, 1166
Alw26I GTCTC 1 cut(s) 288
AlwI GGATC 6 cut(s) 679, 752, 946, 981, 994, 1139
Ama87I CYCGRG 2 cut(s) 557, 695
AoxI GGCC 2 cut(s) 827, 993
ApeKI GCWGC 5 cut(s) 29, 85, 88, 848, 1139
ApoI RAATTY 2 cut(s) 453, 663
ArsI GACNNNNNNTTYG 2 cut(s) 163, 195
AspLEI GCGC 1 cut(s) 798
AspS9I GGNCC 2 cut(s) 699, 827
AsuC2I CCSGG 3 cut(s) 381, 558, 559
AsuHPI GGTGA 2 cut(s) 52, 1015
AvaI CYCGRG 2 cut(s) 557, 695
AvaII GGWCC 1 cut(s) 699
BamHI GGATCC 1 cut(s) 986
BanI GGYRCC 1 cut(s) 383
BauI CACGAG 1 cut(s) 285
BbsI GAAGAC 1 cut(s) 239
BbvCI CCTCAGC 1 cut(s) 77
BbvI GCAGC 5 cut(s) 16, 72, 75, 860, 1126
BccI CCATC 4 cut(s) 71, 708, 723, 1156
BceAI ACGGC 3 cut(s) 127, 134, 980
BcgI CGANNNNNNTGC 2 cut(s) 131, 165
BciT130I CCWGG 2 cut(s) 726, 1095
BciVI GTATCC 1 cut(s) 1116
BcnI CCSGG 3 cut(s) 381, 558, 559
BcoDI GTCTC 1 cut(s) 288
BfmI CTRYAG 2 cut(s) 89, 192
BfuI GTATCC 1 cut(s) 1116
BisI GCNGC 5 cut(s) 30, 86, 89, 849, 1140
BlsI GCNGC 5 cut(s) 31, 87, 90, 850, 1141
Bme1390I CCNGG 5 cut(s) 381, 558, 559, 726, 1095
Bme18I GGWCC 1 cut(s) 699
BmeT110I CYCGRG 2 cut(s) 557, 695
BmgT120I GGNCC 2 cut(s) 699, 827
BmiI GGNNCC 4 cut(s) 385, 700, 701, 988
BmrFI CCNGG 5 cut(s) 381, 558, 559, 726, 1095
BmsI GCATC 5 cut(s) 81, 493, 634, 807, 870
BpiI GAAGAC 1 cut(s) 239
BpmI CTGGAG 2 cut(s) 191, 617
Bpu10I CCTNAGC 1 cut(s) 77
BpuMI CCSGG 3 cut(s) 381, 558, 559
BsaHI GRCGYC 1 cut(s) 201
BsaJI CCNNGG 5 cut(s) 379, 556, 557, 783, 990
BsaWI WCCGGW 1 cut(s) 682
Bsc4I CCNNNNNNNGG 2 cut(s) 242, 595
Bse1I ACTGG 4 cut(s) 35, 208, 1029, 1116
Bse3DI GCAATG 2 cut(s) 372, 546
BseBI CCWGG 2 cut(s) 726, 1095
BseDI CCNNGG 5 cut(s) 379, 556, 557, 783, 990
BseGI GGATG 3 cut(s) 72, 734, 861
BseLI CCNNNNNNNGG 2 cut(s) 242, 595
BseMI GCAATG 2 cut(s) 372, 546
BseMII CTCAG 3 cut(s) 91, 264, 936
BseNI ACTGG 4 cut(s) 35, 208, 1029, 1116
BseRI GAGGAG 1 cut(s) 1186
BseXI GCAGC 5 cut(s) 16, 72, 75, 860, 1126
BseYI CCCAGC 1 cut(s) 971
BsgI GTGCAG 1 cut(s) 15
Bsh1236I CGCG 2 cut(s) 359, 1128
BshFI GGCC 2 cut(s) 829, 995
BshNI GGYRCC 1 cut(s) 383
BsiHKCI CYCGRG 2 cut(s) 557, 695
BsiSI CCGG 3 cut(s) 381, 558, 683
BslFI GGGAC 2 cut(s) 685, 954
BslI CCNNNNNNNGG 2 cut(s) 242, 595
BsmAI GTCTC 1 cut(s) 288
BsmFI GGGAC 2 cut(s) 685, 954
BsmI GAATGC 1 cut(s) 487
BsnI GGCC 2 cut(s) 829, 995
BsoBI CYCGRG 2 cut(s) 557, 695
Bsp1407I TGTACA 1 cut(s) 579
Bsp143I GATC 8 cut(s) 289, 466, 523, 671, 757, 951, 986, 1144
Bsp19I CCATGG 1 cut(s) 990
BspACI CCGC 1 cut(s) 10
BspANI GGCC 2 cut(s) 829, 995
BspCNI CTCAG 3 cut(s) 90, 265, 935
BspFNI CGCG 2 cut(s) 359, 1128
BspLI GGNNCC 4 cut(s) 385, 700, 701, 988
BspMAI CTGCAG 1 cut(s) 93
BspPI GGATC 6 cut(s) 679, 752, 946, 981, 994, 1139
BspQI GCTCTTC 1 cut(s) 256
BspT107I GGYRCC 1 cut(s) 383
BsrDI GCAATG 2 cut(s) 372, 546
BsrGI TGTACA 1 cut(s) 579
BsrI ACTGG 4 cut(s) 35, 208, 1029, 1116
BssECI CCNNGG 5 cut(s) 379, 556, 557, 783, 990
BssMI GATC 8 cut(s) 289, 466, 523, 671, 757, 951, 986, 1144
BssNI GRCGYC 1 cut(s) 201
BssSI CACGAG 1 cut(s) 285
BssT1I CCWWGG 2 cut(s) 783, 990
Bst2BI CACGAG 1 cut(s) 285
Bst2UI CCWGG 2 cut(s) 726, 1095
Bst4CI ACNGT 4 cut(s) 241, 535, 584, 679
Bst6I CTCTTC 2 cut(s) 256, 873
BstACI GRCGYC 1 cut(s) 201
BstAPI GCANNNNNTGC 1 cut(s) 371
BstAUI TGTACA 1 cut(s) 579
BstC8I GCNNGC 5 cut(s) 83, 372, 376, 831, 1200
BstDEI CTNAG 3 cut(s) 77, 273, 922
BstDSI CCRYGG 1 cut(s) 990
BstF5I GGATG 3 cut(s) 72, 734, 861
BstFNI CGCG 2 cut(s) 359, 1128
BstHHI GCGC 1 cut(s) 798
BstKTI GATC 8 cut(s) 292, 469, 526, 674, 760, 954, 989, 1147
BstMAI GTCTC 1 cut(s) 288
BstMBI GATC 8 cut(s) 289, 466, 523, 671, 757, 951, 986, 1144
BstMWI GCNNNNNNNGC 5 cut(s) 78, 181, 371, 403, 512
BstNI CCWGG 2 cut(s) 726, 1095
BstNSI RCATGY 3 cut(s) 179, 772, 1202
BstSCI CCNGG 5 cut(s) 379, 556, 557, 724, 1093
BstSFI CTRYAG 2 cut(s) 89, 192
BstUI CGCG 2 cut(s) 359, 1128
BstV1I GCAGC 5 cut(s) 16, 72, 75, 860, 1126
BstV2I GAAGAC 1 cut(s) 239
BstX2I RGATCY 2 cut(s) 951, 986
BstYI RGATCY 2 cut(s) 951, 986
BsuI GTATCC 1 cut(s) 1116
BsuRI GGCC 2 cut(s) 829, 995
BtgI CCRYGG 1 cut(s) 990
BtsCI GGATG 3 cut(s) 72, 734, 861
BtsIMutI CAGTG 2 cut(s) 42, 237
Cac8I GCNNGC 5 cut(s) 83, 372, 376, 831, 1200
CfoI GCGC 1 cut(s) 798
Cfr13I GGNCC 2 cut(s) 699, 827
Cfr9I CCCGGG 1 cut(s) 557
CseI GACGC 2 cut(s) 181, 209
Csp6I GTAC 1 cut(s) 580
CviAII CATG 8 cut(s) 136, 176, 408, 486, 762, 769, 991, 1199
CviQI GTAC 1 cut(s) 580
DdeI CTNAG 3 cut(s) 77, 273, 922
DpnI GATC 8 cut(s) 291, 468, 525, 673, 759, 953, 988, 1146
DpnII GATC 8 cut(s) 289, 466, 523, 671, 757, 951, 986, 1144
EaeI YGGCCR 1 cut(s) 993
Eam1104I CTCTTC 2 cut(s) 256, 873
EarI CTCTTC 2 cut(s) 256, 873
Eco130I CCWWGG 2 cut(s) 783, 990
Eco32I GATATC 1 cut(s) 1033
Eco47I GGWCC 1 cut(s) 699
Eco57I CTGAAG 1 cut(s) 932
Eco88I CYCGRG 2 cut(s) 557, 695
EcoO109I RGGNCCY 2 cut(s) 699, 827
EcoRII CCWGG 2 cut(s) 724, 1093
EcoRV GATATC 1 cut(s) 1033
EcoT14I CCWWGG 2 cut(s) 783, 990
EcoT22I ATGCAT 1 cut(s) 487
ErhI CCWWGG 2 cut(s) 783, 990
FaeI CATG 8 cut(s) 139, 179, 411, 489, 765, 772, 994, 1202
FalI AAGNNNNNCTT 2 cut(s) 395, 427
FaqI GGGAC 2 cut(s) 685, 954
FatI CATG 8 cut(s) 135, 175, 407, 485, 761, 768, 990, 1198
FblI GTMKAC 2 cut(s) 99, 198
Fnu4HI GCNGC 5 cut(s) 30, 86, 89, 849, 1140
FokI GGATG 3 cut(s) 59, 741, 848
Fsp4HI GCNGC 5 cut(s) 30, 86, 89, 849, 1140
GlaI GCGC 1 cut(s) 797
GluI GCNGC 5 cut(s) 30, 86, 89, 849, 1140
GsaI CCCAGC 1 cut(s) 975
GsuI CTGGAG 2 cut(s) 191, 617
HaeIII GGCC 2 cut(s) 829, 995
HapII CCGG 3 cut(s) 381, 558, 683
HgaI GACGC 2 cut(s) 181, 209
HhaI GCGC 1 cut(s) 798
Hin1I GRCGYC 1 cut(s) 201
Hin1II CATG 8 cut(s) 139, 179, 411, 489, 765, 772, 994, 1202
Hin6I GCGC 1 cut(s) 796
HinP1I GCGC 1 cut(s) 796
HincII GTYRAC 4 cut(s) 100, 199, 306, 496
HindII GTYRAC 4 cut(s) 100, 199, 306, 496
HindIII AAGCTT 1 cut(s) 1164
HinfI GANTC 1 cut(s) 562
HpaI GTTAAC 1 cut(s) 306
HpaII CCGG 3 cut(s) 381, 558, 683
HphI GGTGA 2 cut(s) 52, 1015
Hpy166II GTNNAC 6 cut(s) 40, 100, 199, 306, 496, 580
Hpy188I TCNGA 3 cut(s) 214, 313, 925
Hpy188III TCNNGA 5 cut(s) 287, 449, 596, 802, 892
Hpy8I GTNNAC 6 cut(s) 40, 100, 199, 306, 496, 580
Hpy99I CGWCG 4 cut(s) 104, 113, 175, 203
HpyAV CCTTC 4 cut(s) 163, 595, 875, 977
HpyCH4III ACNGT 4 cut(s) 241, 535, 584, 679
HpyCH4V TGCA 9 cut(s) 32, 91, 233, 339, 475, 485, 521, 539, 833
HpyF10VI GCNNNNNNNGC 5 cut(s) 78, 181, 371, 403, 512
HpyF3I CTNAG 3 cut(s) 77, 273, 922
Hsp92I GRCGYC 1 cut(s) 201
Hsp92II CATG 8 cut(s) 139, 179, 411, 489, 765, 772, 994, 1202
HspAI GCGC 1 cut(s) 796
KflI GGGWCCC 1 cut(s) 699
KspAI GTTAAC 1 cut(s) 306
Kzo9I GATC 8 cut(s) 289, 466, 523, 671, 757, 951, 986, 1144
LguI GCTCTTC 1 cut(s) 256
Lsp1109I GCAGC 5 cut(s) 16, 72, 75, 860, 1126
LweI GCATC 5 cut(s) 81, 493, 634, 807, 870
MaeIII GTNAC 4 cut(s) 325, 584, 748, 1129
MalI GATC 8 cut(s) 291, 468, 525, 673, 759, 953, 988, 1146
MboI GATC 8 cut(s) 289, 466, 523, 671, 757, 951, 986, 1144
MboII GAAGA 9 cut(s) 239, 273, 284, 880, 890, 1040, 1082, 1143, 1172
MfeI CAATTG 1 cut(s) 267
MflI RGATCY 2 cut(s) 951, 986
MluCI AATT 6 cut(s) 267, 453, 546, 663, 1007, 1208
MluI ACGCGT 1 cut(s) 1126
MmeI TCCRAC 2 cut(s) 237, 1100
Mph1103I ATGCAT 1 cut(s) 487
MseI TTAA 1 cut(s) 305
MspI CCGG 3 cut(s) 381, 558, 683
MspR9I CCNGG 5 cut(s) 381, 558, 559, 726, 1095
MunI CAATTG 1 cut(s) 267
Mva1269I GAATGC 1 cut(s) 487
MvaI CCWGG 2 cut(s) 726, 1095
MvnI CGCG 2 cut(s) 359, 1128
MwoI GCNNNNNNNGC 5 cut(s) 78, 181, 371, 403, 512
NciI CCSGG 3 cut(s) 381, 558, 559
NcoI CCATGG 1 cut(s) 990
NdeII GATC 8 cut(s) 289, 466, 523, 671, 757, 951, 986, 1144
NlaIII CATG 8 cut(s) 139, 179, 411, 489, 765, 772, 994, 1202
NlaIV GGNNCC 4 cut(s) 385, 700, 701, 988
NmuCI GTSAC 2 cut(s) 325, 748
NsiI ATGCAT 1 cut(s) 487
NspI RCATGY 3 cut(s) 179, 772, 1202
PaeI GCATGC 1 cut(s) 1202
PciSI GCTCTTC 1 cut(s) 256
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PctI GAATGC 1 cut(s) 487
PfeI GAWTC 1 cut(s) 562
PflFI GACNNNGTC 1 cut(s) 1180
PflMI CCANNNNNTGG 1 cut(s) 595
PfoI TCCNGGA 2 cut(s) 724, 1093
PkrI GCNGC 5 cut(s) 31, 87, 90, 850, 1141
PpuMI RGGWCCY 1 cut(s) 699
PsiI TTATAA 1 cut(s) 551
Psp5II RGGWCCY 1 cut(s) 699
Psp6I CCWGG 2 cut(s) 724, 1093
PspFI CCCAGC 1 cut(s) 971
PspGI CCWGG 2 cut(s) 724, 1093
PspN4I GGNNCC 4 cut(s) 385, 700, 701, 988
PspPI GGNCC 2 cut(s) 699, 827
PspPPI RGGWCCY 1 cut(s) 699
PstI CTGCAG 1 cut(s) 93
PsuI RGATCY 2 cut(s) 951, 986
PsyI GACNNNGTC 1 cut(s) 1180
RsaI GTAC 1 cut(s) 581
RsaNI GTAC 1 cut(s) 580
SalI GTCGAC 2 cut(s) 98, 197
SapI GCTCTTC 1 cut(s) 256
SaqAI TTAA 1 cut(s) 305
SatI GCNGC 5 cut(s) 30, 86, 89, 849, 1140
Sau3AI GATC 8 cut(s) 289, 466, 523, 671, 757, 951, 986, 1144
Sau96I GGNCC 2 cut(s) 699, 827
ScrFI CCNGG 5 cut(s) 381, 558, 559, 726, 1095
SfaNI GCATC 5 cut(s) 81, 493, 634, 807, 870
SfcI CTRYAG 2 cut(s) 89, 192
SinI GGWCC 1 cut(s) 699
SmaI CCCGGG 1 cut(s) 559
SphI GCATGC 1 cut(s) 1202
Sse9I AATT 6 cut(s) 267, 453, 546, 663, 1007, 1208
SsiI CCGC 1 cut(s) 10
StyD4I CCNGG 5 cut(s) 379, 556, 557, 724, 1093
StyI CCWWGG 2 cut(s) 783, 990
TaaI ACNGT 4 cut(s) 241, 535, 584, 679
TaqI TCGA 6 cut(s) 17, 53, 99, 198, 457, 465
TasI AATT 6 cut(s) 267, 453, 546, 663, 1007, 1208
TatI WGTACW 1 cut(s) 579
TfiI GAWTC 1 cut(s) 562
Tru1I TTAA 1 cut(s) 305
Tru9I TTAA 1 cut(s) 305
TscAI CASTG 2 cut(s) 42, 244
TseFI GTSAC 2 cut(s) 325, 748
TseI GCWGC 5 cut(s) 29, 85, 88, 848, 1139
Tsp45I GTSAC 2 cut(s) 325, 748
TspDTI ATGAA 2 cut(s) 438, 829
TspMI CCCGGG 1 cut(s) 557
TspRI CASTG 2 cut(s) 42, 244
Tth111I GACNNNGTC 1 cut(s) 1180
Van91I CCANNNNNTGG 1 cut(s) 595
VpaK11BI GGWCC 1 cut(s) 699
XapI RAATTY 2 cut(s) 453, 663
XceI RCATGY 3 cut(s) 179, 772, 1202
XcmI CCANNNNNNNNNTGG 1 cut(s) 997
XmaI CCCGGG 1 cut(s) 557
XmiI GTMKAC 2 cut(s) 99, 198
Zsp2I ATGCAT 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.