Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0005586

Physical Location & Seq

Genomic Coordinates Forward (+)

11757079 .. 11762160

Gene Structure 5082 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0131800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGATTCTGCTCGGAGTTGGTTTCAGAAGTTTCAGCCGAGAGCGAAGAAGAAGGGGACGGAAAATGCTAGAGATGAAAGGCCGGCGGCTTCTTTGGACGACGAGGCGCCGTCGGCTGCGACCAAGCAGAAGGTTGAGGCGGCGAAGCAGTATATCGAGAATCACTACAAGGCGCAAATGAAGTGCTTGCAGGATAGGAAGGAGAGGCGGTGGATGCTGGAGAGGCGGCTGGCGGATGCCGAAGTTTCGCAGGAGGATCAGATGAATGTGCTGAAGTATTTGGAGCAGAAGGAGACGGAGTATATGCATCTTCAGAGGCATAAAATGGGGGTTGATGACTTTCAGCTTTTGACGATTATAGGAAGGGGTGCATTCGGAGAGGTGAGAATTTGCAGGGAGAAGTCTACTGGCCAGGTGTATGCCATGAAAAAGCTCAAGAAATCGGAGATGCTCCGAAGAGGCCAGGTGGAGCATGTTAAAGCGGAAAGAAATCTTCTTGCTGAGGTTGATAGTGCTTACATTGTCAAGCTCTATTGCTCCTTTCAAGATGATGAATTTTTGTATCTTATAATGGAATATCTTCCGGGAGGTGACATGATGACATTACTAATGCGCAAAGATATCTTGACTGAAGATGAAGCAAGGTTTTATGTAGGAGAGACTGTCCTTGCCATTGAGTCTATTCACAAGCACAACTACATTCACAGGGATATTAAGCCTGATAATTTACTGCTCGACCGCTATGGCCACATGAAGCTTTCAGATTTTGGGTTGTGTAAGCCTTTAGGCACTAATAGCTTTCCGGATCTTAGTGAGAATGACTCAGCAGTCGGAAGGAATTTAAAATCCTCTTCGCAGAGTAACCAACATTCTAACCCTCCTACACCAAAAAGAACCCAGCAGGAACAGTTATTGCACTGGCAAAAGAACAGACGAATGTTGGCTTATTCAACGGTTGGGACTCCAGACTACATTGCTCCAGAAGTACTGCTGAAGAAAGGATATGGAATGGAATGCGACTGGTGGTCTCTTGGTGCAATCATGTACGAGATGCTTGTGGGCTTTCCACCTTTCTATTCCGAAGAACCCATGTCCACATGTAGAAAGATTGTAAACTGGAAAACTCATCTGAAATTCCCAGAGGAAGCAAAACTCTCTGCCGAGGCTAAAGATCTCATTTGCAAGCTCCTCTGCAATGTTGAGCAAAGGCTTGGGACGAAAGGAGCTTATGAAATAAAAGCACACCCATGGTTTAAAGGGTTACAATGGGATAGATTATATCAGATGGAAGCTGCCTTTCTACCAGAGGTTAACAACGAGTTGGATACTCAAAATTTTGAGAAGTTTGAAGAGTTGGGGCCTCAGGTAGAAACTCCATCAAAATCCGGTCCATGGAGAAAGATGCTTTCATCCATGGATACAAATTTTGTTGGTTATACATACAAGAATTATGAAATTGTCAATGAGCATCATATGCCTGGCATTGCTGAGTTGAAGAAAAAGACTAATAAGCCAAAGAGACCTTCTGTTAAGGCCTTATTCGACACACCTGATCCTCCAGACCCCCCAACACATGGAACTTCTCTCAACCAAATGTCCACTCTGCCTACTGTCTCGGAAGGCTCTGAGCCATCTAGGCAATCTACTAGACCCCCACAATATCCACACAAACCTCCAAGAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009893 GO:0010310 GO:0010726 GO:0010941 GO:0010942 GO:0016020 GO:0019222 GO:0031323 GO:0031325 GO:0043207 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051193 GO:0051194 GO:0051704 GO:0051707 GO:0065007 GO:0071944 GO:0098542 GO:2000377 GO:2000379

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

561

Amino Acids

64.96

Weight (kDa)

8.49

Isoelectric Point (pI)

45.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	115 - 266	1.1e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	116 - 262	2e-21	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	315 - 418	1.1e-21	Protein kinase domain
Pkinase_C	PF00433	437 - 481	2.2e-09	Protein kinase C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005586)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53970
fragaria_vesca	FvH4_3g19340 FvH4_3g19340 FvH4_3g19340 FvH4_3g19340 FvH4_3g19340 FvH4_3g19340 FvH4_3g19340 FvH4_3g19340
malus_domestica	MD03G1234800.v1.1 MD11G1255300.v1.1
prunus_persica	Prupe.4G174400_v2.0.a1 Prupe.4G174400_v2.0.a1 Prupe.4G174400_v2.0.a1 Prupe.4G174400_v2.0.a1 Prupe.4G174400_v2.0.a1 Prupe.4G174400_v2.0.a1
pyrus_communis	pycom11g22570
rosa_chinensis	RchiOBHm_Chr5g0032401
rosa_laevigata	RLG00000033395
rosa_multiflora	Rmu_sc0022287.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048030
rosa_rugosa	Rorug05G0131800
rosa_samantha	Rh5AG225000 Rh5BG226100 Rh5CG251500 Rh5DG230700
rosa_wichuraiana	Rw5G020550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	569
AasI	GACNNNNNNGTC	1 cut(s)	827
Acc16I	TGCGCA	1 cut(s)	614
AccB1I	GGYRCC	1 cut(s)	106
AccB7I	CCANNNNNTGG	1 cut(s)	1574
AccI	GTMKAC	1 cut(s)	404
AccIII	TCCGGA	1 cut(s)	802
AciI	CCGC	7 cut(s)	86, 140, 208, 226, 233, 482, 739
AclWI	GGATC	3 cut(s)	264, 813, 1547
AcoI	YGGCCR	2 cut(s)	409, 745
AcsI	RAATTY	6 cut(s)	387, 554, 838, 1133, 1333, 1423
AcuI	CTGAAG	4 cut(s)	293, 296, 651, 1013
AcyI	GRCGYC	1 cut(s)	107
AfaI	GTAC	2 cut(s)	987, 1046
AfiI	CCNNNNNNNGG	2 cut(s)	1392, 1574
AflIII	ACRYGT	1 cut(s)	1097
AgsI	TTSAA	4 cut(s)	545, 951, 1349, 1495
AhdI	GACNNNNNGTC	1 cut(s)	1024
AjnI	CCWGG	3 cut(s)	411, 462, 1477
AjuI	GAANNNNNNNTTGG	2 cut(s)	1507, 1539
AluBI	AGCT	8 cut(s)	346, 433, 529, 757, 798, 1186, 1226, 1292
AluI	AGCT	8 cut(s)	346, 433, 529, 757, 798, 1186, 1226, 1292
Alw26I	GTCTC	5 cut(s)	287, 653, 1032, 1513, 1618
AlwI	GGATC	3 cut(s)	264, 813, 1547
Aor13HI	TCCGGA	1 cut(s)	802
AoxI	GGCC	6 cut(s)	80, 409, 460, 745, 1358, 1533
ApeKI	GCWGC	2 cut(s)	116, 1292
ApoI	RAATTY	6 cut(s)	387, 554, 838, 1133, 1333, 1423
Asp700I	GAANNNNTTC	1 cut(s)	579
AspLEI	GCGC	3 cut(s)	109, 175, 615
AspS9I	GGNCC	2 cut(s)	1358, 1388
AsuC2I	CCSGG	1 cut(s)	585
AsuHPI	GGTGA	2 cut(s)	394, 602
AvaII	GGWCC	1 cut(s)	1388
AxyI	CCTNAGG	1 cut(s)	1362
BalI	TGGCCA	2 cut(s)	411, 747
BanI	GGYRCC	1 cut(s)	106
BbvCI	CCTCAGC	1 cut(s)	501
BbvI	GCAGC	2 cut(s)	103, 1279
BccI	CCATC	3 cut(s)	1279, 1384, 1639
BceAI	ACGGC	1 cut(s)	94
BciT130I	CCWGG	3 cut(s)	413, 464, 1479
BciVI	GTATCC	2 cut(s)	1318, 1411
BcnI	CCSGG	1 cut(s)	585
BcoDI	GTCTC	5 cut(s)	287, 653, 1032, 1513, 1618
BfaI	CTAG	3 cut(s)	69, 1635, 1647
BfoI	RGCGCY	1 cut(s)	110
BfuI	GTATCC	2 cut(s)	1318, 1411
BglI	GCCNNNNNGGC	1 cut(s)	1636
BglII	AGATCT	1 cut(s)	1171
BisI	GCNGC	5 cut(s)	87, 117, 141, 227, 1293
BlsI	GCNGC	5 cut(s)	88, 118, 142, 228, 1294
BmcAI	AGTACT	1 cut(s)	987
Bme1390I	CCNGG	4 cut(s)	413, 464, 585, 1479
Bme18I	GGWCC	1 cut(s)	1388
BmeRI	GACNNNNNGTC	1 cut(s)	1024
BmgT120I	GGNCC	2 cut(s)	1358, 1388
BmiI	GGNNCC	2 cut(s)	108, 1359
BmrFI	CCNGG	4 cut(s)	413, 464, 585, 1479
BmsI	GCATC	7 cut(s)	204, 226, 316, 438, 1041, 1392, 1477
BplI	GAGNNNNNCTC	2 cut(s)	806, 838
BpmI	CTGGAG	4 cut(s)	239, 948, 963, 1542
Bpu10I	CCTNAGC	1 cut(s)	501
BpuEI	CTTGAG	1 cut(s)	419
BpuMI	CCSGG	1 cut(s)	585
BsaHI	GRCGYC	1 cut(s)	107
BsaI	GGTCTC	2 cut(s)	1032, 1513
BsaJI	CCNNGG	4 cut(s)	1161, 1247, 1391, 1413
BsaWI	WCCGGW	2 cut(s)	802, 1385
BsaXI	ACNNNNNCTCC	6 cut(s)	194, 224, 284, 314, 648, 678
Bsc4I	CCNNNNNNNGG	2 cut(s)	1392, 1574
Bse118I	RCCGGY	1 cut(s)	82
Bse1I	ACTGG	4 cut(s)	412, 923, 1025, 1121
Bse21I	CCTNAGG	1 cut(s)	1362
Bse3DI	GCAATG	3 cut(s)	972, 1201, 1482
BseAI	TCCGGA	1 cut(s)	802
BseBI	CCWGG	3 cut(s)	413, 464, 1479
BseDI	CCNNGG	4 cut(s)	1161, 1247, 1391, 1413
BseGI	GGATG	3 cut(s)	219, 241, 1409
BseLI	CCNNNNNNNGG	2 cut(s)	1392, 1574
BseMI	GCAATG	3 cut(s)	972, 1201, 1482
BseMII	CTCAG	5 cut(s)	492, 837, 1376, 1479, 1617
BseNI	ACTGG	4 cut(s)	412, 923, 1025, 1121
BseRI	GAGGAG	1 cut(s)	1178
BseXI	GCAGC	2 cut(s)	103, 1279
BseYI	CCCAGC	1 cut(s)	897
Bsh1285I	CGRYCG	1 cut(s)	739
BshFI	GGCC	6 cut(s)	82, 411, 462, 747, 1360, 1535
BshNI	GGYRCC	1 cut(s)	106
BsiEI	CGRYCG	1 cut(s)	739
BsiSI	CCGG	4 cut(s)	83, 584, 803, 1386
BslFI	GGGAC	3 cut(s)	70, 973, 1228
BslI	CCNNNNNNNGG	2 cut(s)	1392, 1574
BsmAI	GTCTC	5 cut(s)	287, 653, 1032, 1513, 1618
BsmBI	CGTCTC	1 cut(s)	287
BsmFI	GGGAC	3 cut(s)	70, 973, 1228
BsmI	GAATGC	2 cut(s)	371, 1019
BsnI	GGCC	6 cut(s)	82, 411, 462, 747, 1360, 1535
Bso31I	GGTCTC	2 cut(s)	1032, 1513
Bsp13I	TCCGGA	1 cut(s)	802
Bsp143I	GATC	4 cut(s)	256, 805, 1171, 1552
Bsp19I	CCATGG	3 cut(s)	1247, 1391, 1413
BspACI	CCGC	7 cut(s)	86, 140, 208, 226, 233, 482, 739
BspANI	GGCC	6 cut(s)	82, 411, 462, 747, 1360, 1535
BspCNI	CTCAG	5 cut(s)	493, 836, 1375, 1480, 1618
BspEI	TCCGGA	1 cut(s)	802
BspLI	GGNNCC	2 cut(s)	108, 1359
BspPI	GGATC	3 cut(s)	264, 813, 1547
BspT107I	GGYRCC	1 cut(s)	106
BspTNI	GGTCTC	2 cut(s)	1032, 1513
BsrDI	GCAATG	3 cut(s)	972, 1201, 1482
BsrFI	RCCGGY	1 cut(s)	82
BsrI	ACTGG	4 cut(s)	412, 923, 1025, 1121
BssAI	RCCGGY	1 cut(s)	82
BssECI	CCNNGG	4 cut(s)	1161, 1247, 1391, 1413
BssMI	GATC	4 cut(s)	256, 805, 1171, 1552
BssNI	GRCGYC	1 cut(s)	107
BssT1I	CCWWGG	3 cut(s)	1247, 1391, 1413
Bst2UI	CCWGG	3 cut(s)	413, 464, 1479
Bst4CI	ACNGT	4 cut(s)	664, 909, 955, 1612
Bst6I	CTCTTC	3 cut(s)	451, 856, 1344
BstACI	GRCGYC	1 cut(s)	107
BstAPI	GCANNNNNTGC	1 cut(s)	1474
BstC8I	GCNNGC	4 cut(s)	84, 188, 231, 1184
BstDEI	CTNAG	6 cut(s)	501, 809, 823, 1362, 1488, 1626
BstDSI	CCRYGG	3 cut(s)	1247, 1391, 1413
BstF5I	GGATG	3 cut(s)	219, 241, 1409
BstH2I	RGCGCY	1 cut(s)	110
BstHHI	GCGC	3 cut(s)	109, 175, 615
BstKTI	GATC	4 cut(s)	259, 808, 1174, 1555
BstMAI	GTCTC	5 cut(s)	287, 653, 1032, 1513, 1618
BstMBI	GATC	4 cut(s)	256, 805, 1171, 1552
BstMCI	CGRYCG	1 cut(s)	739
BstMWI	GCNNNNNNNGC	6 cut(s)	113, 214, 223, 795, 1474, 1636
BstNI	CCWGG	3 cut(s)	413, 464, 1479
BstNSI	RCATGY	2 cut(s)	476, 1101
BstSCI	CCNGG	4 cut(s)	411, 462, 583, 1477
BstV1I	GCAGC	2 cut(s)	103, 1279
BstX2I	RGATCY	2 cut(s)	805, 1171
BstYI	RGATCY	2 cut(s)	805, 1171
Bsu36I	CCTNAGG	1 cut(s)	1362
BsuI	GTATCC	2 cut(s)	1318, 1411
BsuRI	GGCC	6 cut(s)	82, 411, 462, 747, 1360, 1535
BtgI	CCRYGG	3 cut(s)	1247, 1391, 1413
BtsCI	GGATG	3 cut(s)	219, 241, 1409
BtsIMutI	CAGTG	1 cut(s)	916
Cac8I	GCNNGC	4 cut(s)	84, 188, 231, 1184
CfoI	GCGC	3 cut(s)	109, 175, 615
Cfr10I	RCCGGY	1 cut(s)	82
Cfr13I	GGNCC	2 cut(s)	1358, 1388
Csp6I	GTAC	2 cut(s)	986, 1045
CviQI	GTAC	2 cut(s)	986, 1045
DdeI	CTNAG	6 cut(s)	501, 809, 823, 1362, 1488, 1626
DinI	GGCGCC	1 cut(s)	108
DpnI	GATC	4 cut(s)	258, 807, 1173, 1554
DpnII	GATC	4 cut(s)	256, 805, 1171, 1552
DraI	TTTAAA	2 cut(s)	843, 1255
DrdI	GACNNNNNNGTC	1 cut(s)	827
DriI	GACNNNNNGTC	1 cut(s)	1024
DseDI	GACNNNNNNGTC	1 cut(s)	827
EaeI	YGGCCR	2 cut(s)	409, 745
Eam1104I	CTCTTC	3 cut(s)	451, 856, 1344
Eam1105I	GACNNNNNGTC	1 cut(s)	1024
EarI	CTCTTC	3 cut(s)	451, 856, 1344
EciI	GGCGGA	1 cut(s)	248
Eco130I	CCWWGG	3 cut(s)	1247, 1391, 1413
Eco147I	AGGCCT	1 cut(s)	1535
Eco31I	GGTCTC	2 cut(s)	1032, 1513
Eco32I	GATATC	1 cut(s)	622
Eco47I	GGWCC	1 cut(s)	1388
Eco57I	CTGAAG	4 cut(s)	293, 296, 651, 1013
Eco81I	CCTNAGG	1 cut(s)	1362
EcoO109I	RGGNCCY	1 cut(s)	1358
EcoRII	CCWGG	3 cut(s)	411, 462, 1477
EcoRV	GATATC	1 cut(s)	622
EcoT14I	CCWWGG	3 cut(s)	1247, 1391, 1413
EcoT22I	ATGCAT	1 cut(s)	309
EgeI	GGCGCC	1 cut(s)	108
EheI	GGCGCC	1 cut(s)	108
ErhI	CCWWGG	3 cut(s)	1247, 1391, 1413
Esp3I	CGTCTC	1 cut(s)	287
FaqI	GGGAC	3 cut(s)	70, 973, 1228
FauNDI	CATATG	1 cut(s)	1473
FblI	GTMKAC	1 cut(s)	404
Fnu4HI	GCNGC	5 cut(s)	87, 117, 141, 227, 1293
FokI	GGATG	3 cut(s)	226, 248, 1396
Fsp4HI	GCNGC	5 cut(s)	87, 117, 141, 227, 1293
FspBI	CTAG	3 cut(s)	69, 1635, 1647
FspI	TGCGCA	1 cut(s)	614
GlaI	GCGC	3 cut(s)	108, 174, 614
GluI	GCNGC	5 cut(s)	87, 117, 141, 227, 1293
GsaI	CCCAGC	1 cut(s)	901
GsuI	CTGGAG	4 cut(s)	239, 948, 963, 1542
HaeII	RGCGCY	1 cut(s)	110
HaeIII	GGCC	6 cut(s)	82, 411, 462, 747, 1360, 1535
HapII	CCGG	4 cut(s)	83, 584, 803, 1386
HhaI	GCGC	3 cut(s)	109, 175, 615
Hin1I	GRCGYC	1 cut(s)	107
Hin6I	GCGC	3 cut(s)	107, 173, 613
HinP1I	GCGC	3 cut(s)	107, 173, 613
HincII	GTYRAC	1 cut(s)	1312
HindII	GTYRAC	1 cut(s)	1312
HindIII	AAGCTT	1 cut(s)	755
HinfI	GANTC	5 cut(s)	5, 160, 677, 821, 961
HpaI	GTTAAC	1 cut(s)	1312
HpaII	CCGG	4 cut(s)	83, 584, 803, 1386
HphI	GGTGA	2 cut(s)	394, 602
Hpy166II	GTNNAC	5 cut(s)	405, 1095, 1114, 1312, 1599
Hpy188III	TCNNGA	8 cut(s)	157, 436, 545, 625, 803, 965, 980, 1559
Hpy8I	GTNNAC	5 cut(s)	405, 1095, 1114, 1312, 1599
Hpy99I	CGWCG	2 cut(s)	104, 115
HpyAV	CCTTC	8 cut(s)	46, 124, 193, 283, 357, 828, 1533, 1613
HpyCH4III	ACNGT	4 cut(s)	664, 909, 955, 1612
HpyCH4V	TGCA	8 cut(s)	190, 307, 371, 393, 916, 1037, 1182, 1194
HpyF10VI	GCNNNNNNNGC	6 cut(s)	113, 214, 223, 795, 1474, 1636
HpyF3I	CTNAG	6 cut(s)	501, 809, 823, 1362, 1488, 1626
Hsp92I	GRCGYC	1 cut(s)	107
HspAI	GCGC	3 cut(s)	107, 173, 613
KasI	GGCGCC	1 cut(s)	106
Kpn2I	TCCGGA	1 cut(s)	802
KroI	GCCGGC	1 cut(s)	82
KroNI	GCCGGC	1 cut(s)	84
KspAI	GTTAAC	1 cut(s)	1312
Kzo9I	GATC	4 cut(s)	256, 805, 1171, 1552
LmnI	GCTCC	7 cut(s)	283, 456, 469, 542, 982, 1191, 1223
Lsp1109I	GCAGC	2 cut(s)	103, 1279
LweI	GCATC	7 cut(s)	204, 226, 316, 438, 1041, 1392, 1477
MaeI	CTAG	3 cut(s)	69, 1635, 1647
MaeIII	GTNAC	3 cut(s)	590, 860, 1260
MalI	GATC	4 cut(s)	258, 807, 1173, 1554
MboI	GATC	4 cut(s)	256, 805, 1171, 1552
MflI	RGATCY	2 cut(s)	805, 1171
MlsI	TGGCCA	2 cut(s)	411, 747
MluCI	AATT	9 cut(s)	387, 554, 724, 838, 1133, 1333, 1423, 1447, 1455
MluNI	TGGCCA	2 cut(s)	411, 747
Mly113I	GGCGCC	1 cut(s)	107
MlyI	GAGTC	3 cut(s)	686, 815, 955
MmeI	TCCRAC	2 cut(s)	811, 1302
Mox20I	TGGCCA	2 cut(s)	411, 747
Mph1103I	ATGCAT	1 cut(s)	309
MroI	TCCGGA	1 cut(s)	802
MroNI	GCCGGC	1 cut(s)	82
MroXI	GAANNNNTTC	1 cut(s)	579
MscI	TGGCCA	2 cut(s)	411, 747
MseI	TTAA	6 cut(s)	477, 714, 842, 1254, 1311, 1530
MslI	CAYNNNNRTG	1 cut(s)	1246
Msp20I	TGGCCA	2 cut(s)	411, 747
MspI	CCGG	4 cut(s)	83, 584, 803, 1386
MspR9I	CCNGG	4 cut(s)	413, 464, 585, 1479
Mva1269I	GAATGC	2 cut(s)	371, 1019
MvaI	CCWGG	3 cut(s)	413, 464, 1479
MwoI	GCNNNNNNNGC	6 cut(s)	113, 214, 223, 795, 1474, 1636
NaeI	GCCGGC	1 cut(s)	84
NarI	GGCGCC	1 cut(s)	107
NciI	CCSGG	1 cut(s)	585
NcoI	CCATGG	3 cut(s)	1247, 1391, 1413
NdeI	CATATG	1 cut(s)	1473
NdeII	GATC	4 cut(s)	256, 805, 1171, 1552
NgoMIV	GCCGGC	1 cut(s)	82
NlaIV	GGNNCC	2 cut(s)	108, 1359
NmeAIII	GCCGAG	2 cut(s)	63, 1186
NmuCI	GTSAC	1 cut(s)	590
NsbI	TGCGCA	1 cut(s)	614
NsiI	ATGCAT	1 cut(s)	309
NspI	RCATGY	2 cut(s)	476, 1101
PceI	AGGCCT	1 cut(s)	1535
PciI	ACATGT	1 cut(s)	1097
PctI	GAATGC	2 cut(s)	371, 1019
PdiI	GCCGGC	1 cut(s)	84
PdmI	GAANNNNTTC	1 cut(s)	579
PfeI	GAWTC	2 cut(s)	5, 160
PflMI	CCANNNNNTGG	1 cut(s)	1574
PfoI	TCCNGGA	1 cut(s)	583
PkrI	GCNGC	5 cut(s)	88, 118, 142, 228, 1294
PleI	GAGTC	3 cut(s)	685, 815, 955
PluTI	GGCGCC	1 cut(s)	110
PpsI	GAGTC	3 cut(s)	685, 815, 955
PscI	ACATGT	1 cut(s)	1097
PsiI	TTATAA	1 cut(s)	569
Psp6I	CCWGG	3 cut(s)	411, 462, 1477
PspFI	CCCAGC	1 cut(s)	897
PspGI	CCWGG	3 cut(s)	411, 462, 1477
PspN4I	GGNNCC	2 cut(s)	108, 1359
PspPI	GGNCC	2 cut(s)	1358, 1388
PsuI	RGATCY	2 cut(s)	805, 1171
RsaI	GTAC	2 cut(s)	987, 1046
RsaNI	GTAC	2 cut(s)	986, 1045
RseI	CAYNNNNRTG	1 cut(s)	1246
SaqAI	TTAA	6 cut(s)	477, 714, 842, 1254, 1311, 1530
SatI	GCNGC	5 cut(s)	87, 117, 141, 227, 1293
Sau3AI	GATC	4 cut(s)	256, 805, 1171, 1552
Sau96I	GGNCC	2 cut(s)	1358, 1388
ScaI	AGTACT	1 cut(s)	987
SchI	GAGTC	3 cut(s)	686, 815, 955
ScrFI	CCNGG	4 cut(s)	413, 464, 585, 1479
SfaNI	GCATC	7 cut(s)	204, 226, 316, 438, 1041, 1392, 1477
SfoI	GGCGCC	1 cut(s)	108
SinI	GGWCC	1 cut(s)	1388
SmiMI	CAYNNNNRTG	1 cut(s)	1246
SmlI	CTYRAG	1 cut(s)	434
SmoI	CTYRAG	1 cut(s)	434
Sse9I	AATT	9 cut(s)	387, 554, 724, 838, 1133, 1333, 1423, 1447, 1455
SseBI	AGGCCT	1 cut(s)	1535
SsiI	CCGC	7 cut(s)	86, 140, 208, 226, 233, 482, 739
SspDI	GGCGCC	1 cut(s)	106
SspMI	CTAG	3 cut(s)	69, 1635, 1647
StuI	AGGCCT	1 cut(s)	1535
StyD4I	CCNGG	4 cut(s)	411, 462, 583, 1477
StyI	CCWWGG	3 cut(s)	1247, 1391, 1413
TaaI	ACNGT	4 cut(s)	664, 909, 955, 1612
TaqI	TCGA	3 cut(s)	156, 735, 1542
TasI	AATT	9 cut(s)	387, 554, 724, 838, 1133, 1333, 1423, 1447, 1455
TatI	WGTACW	1 cut(s)	985
TauI	GCSGC	3 cut(s)	89, 143, 229
TfiI	GAWTC	2 cut(s)	5, 160
Tru1I	TTAA	6 cut(s)	477, 714, 842, 1254, 1311, 1530
Tru9I	TTAA	6 cut(s)	477, 714, 842, 1254, 1311, 1530
TscAI	CASTG	1 cut(s)	923
TseFI	GTSAC	1 cut(s)	590
TseI	GCWGC	2 cut(s)	116, 1292
Tsp45I	GTSAC	1 cut(s)	590
TspGWI	ACGGA	2 cut(s)	74, 311
TspRI	CASTG	1 cut(s)	923
Van91I	CCANNNNNTGG	1 cut(s)	1574
VpaK11BI	GGWCC	1 cut(s)	1388
XapI	RAATTY	6 cut(s)	387, 554, 838, 1133, 1333, 1423
XceI	RCATGY	2 cut(s)	476, 1101
XmiI	GTMKAC	1 cut(s)	404
XmnI	GAANNNNTTC	1 cut(s)	579
XspI	CTAG	3 cut(s)	69, 1635, 1647
ZrmI	AGTACT	1 cut(s)	987
Zsp2I	ATGCAT	1 cut(s)	309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.