Ras-induced vulval development antagonist
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02720 |
| fragaria_vesca | FvH4_2g11951 FvH4_2g11951 FvH4_2g11951 FvH4_4g12190 |
| malus_domestica | MD03G1262900.v1.1 MD11G1283600.v1.1 |
| prunus_persica | Prupe.8G239200_v2.0.a1 |
| pyrus_communis | pycom03g21040 pycom11g25110 |
| rosa_chinensis | RchiOBHm_Chr4g0409951 |
| rosa_laevigata | RLG00000008511 |
| rosa_multiflora | Rmu_co8122418.1_g000001 Rmu_co8144940.1_g000001 Rmu_sc0000987.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00354430 |
| rosa_rugosa | Rorug04G0099600 |
| rosa_samantha | Rh4AG158600 Rh4BG158000 Rh4CG169200 Rh4DG153300 |
| rosa_wichuraiana | Rw0G003210 Rw4G013090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 69 |
| AccB1I | GGYRCC | 1 cut(s) | 69 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1190 |
| AccBSI | CCGCTC | 2 cut(s) | 265, 592 |
| AccII | CGCG | 2 cut(s) | 1303, 1427 |
| AclWI | GGATC | 1 cut(s) | 816 |
| AcoI | YGGCCR | 2 cut(s) | 64, 1394 |
| AcsI | RAATTY | 2 cut(s) | 368, 560 |
| AcuI | CTGAAG | 2 cut(s) | 461, 1236 |
| AcyI | GRCGYC | 2 cut(s) | 235, 524 |
| AfaI | GTAC | 2 cut(s) | 71, 464 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 31, 231, 538, 1190, 1256, 1307, 1510 |
| AgsI | TTSAA | 4 cut(s) | 560, 617, 1132, 1404 |
| AjnI | CCWGG | 1 cut(s) | 1249 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1154, 1173, 1186, 1205 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 697, 729 |
| AluBI | AGCT | 7 cut(s) | 126, 249, 439, 487, 1165, 1214, 1420 |
| AluI | AGCT | 7 cut(s) | 126, 249, 439, 487, 1165, 1214, 1420 |
| Alw21I | GWGCWC | 1 cut(s) | 1433 |
| Alw26I | GTCTC | 2 cut(s) | 31, 984 |
| AlwI | GGATC | 1 cut(s) | 816 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 487, 1458 |
| Ama87I | CYCGRG | 2 cut(s) | 172, 295 |
| AoxI | GGCC | 7 cut(s) | 8, 64, 214, 347, 1193, 1247, 1394 |
| ApeKI | GCWGC | 4 cut(s) | 117, 240, 1076, 1452 |
| ApoI | RAATTY | 2 cut(s) | 368, 560 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 368 |
| Asp718I | GGTACC | 1 cut(s) | 69 |
| AspA2I | CCTAGG | 3 cut(s) | 197, 332, 536 |
| AspLEI | GCGC | 3 cut(s) | 729, 1427, 1469 |
| AspS9I | GGNCC | 5 cut(s) | 215, 347, 394, 1193, 1489 |
| AsuC2I | CCSGG | 2 cut(s) | 218, 1512 |
| AsuHPI | GGTGA | 3 cut(s) | 794, 1265, 1271 |
| AsuII | TTCGAA | 2 cut(s) | 722, 950 |
| AvaI | CYCGRG | 2 cut(s) | 172, 295 |
| AvaII | GGWCC | 2 cut(s) | 394, 1489 |
| AvrII | CCTAGG | 3 cut(s) | 197, 332, 536 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 97, 130 |
| BalI | TGGCCA | 1 cut(s) | 1396 |
| BanI | GGYRCC | 1 cut(s) | 69 |
| BanII | GRGCYC | 2 cut(s) | 302, 1243 |
| BauI | CACGAG | 1 cut(s) | 56 |
| BbsI | GAAGAC | 1 cut(s) | 930 |
| Bbv12I | GWGCWC | 1 cut(s) | 1433 |
| BbvCI | CCTCAGC | 1 cut(s) | 488 |
| BbvI | GCAGC | 4 cut(s) | 129, 252, 1063, 1464 |
| BccI | CCATC | 2 cut(s) | 19, 29 |
| BceAI | ACGGC | 1 cut(s) | 79 |
| BciT130I | CCWGG | 1 cut(s) | 1251 |
| BcnI | CCSGG | 2 cut(s) | 218, 1512 |
| BcoDI | GTCTC | 2 cut(s) | 31, 984 |
| BfaI | CTAG | 6 cut(s) | 186, 198, 321, 333, 537, 1209 |
| BfoI | RGCGCY | 1 cut(s) | 1470 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 201 |
| BisI | GCNGC | 8 cut(s) | 118, 157, 241, 266, 280, 1077, 1453, 1456 |
| BlnI | CCTAGG | 3 cut(s) | 197, 332, 536 |
| BlpI | GCTNAGC | 1 cut(s) | 1421 |
| BlsI | GCNGC | 8 cut(s) | 119, 158, 242, 267, 281, 1078, 1454, 1457 |
| Bme1390I | CCNGG | 3 cut(s) | 218, 1251, 1512 |
| Bme18I | GGWCC | 2 cut(s) | 394, 1489 |
| BmeT110I | CYCGRG | 2 cut(s) | 172, 295 |
| BmgT120I | GGNCC | 5 cut(s) | 215, 347, 394, 1193, 1489 |
| BmiI | GGNNCC | 3 cut(s) | 71, 348, 386 |
| BmrFI | CCNGG | 3 cut(s) | 218, 1251, 1512 |
| BmsI | GCATC | 3 cut(s) | 1057, 1252, 1524 |
| BpiI | GAAGAC | 1 cut(s) | 930 |
| Bpu10I | CCTNAGC | 1 cut(s) | 488 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1421 |
| Bpu14I | TTCGAA | 2 cut(s) | 722, 950 |
| BpuEI | CTTGAG | 1 cut(s) | 458 |
| BpuMI | CCSGG | 2 cut(s) | 218, 1512 |
| BsaHI | GRCGYC | 2 cut(s) | 235, 524 |
| BsaJI | CCNNGG | 8 cut(s) | 171, 197, 225, 332, 536, 1071, 1301, 1354 |
| BsaWI | WCCGGW | 2 cut(s) | 31, 396 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 31, 231, 538, 1190, 1256, 1307, 1510 |
| Bse118I | RCCGGY | 1 cut(s) | 66 |
| Bse1I | ACTGG | 1 cut(s) | 1184 |
| Bse3DI | GCAATG | 1 cut(s) | 1266 |
| BseBI | CCWGG | 1 cut(s) | 1251 |
| BseDI | CCNNGG | 8 cut(s) | 171, 197, 225, 332, 536, 1071, 1301, 1354 |
| BseGI | GGATG | 7 cut(s) | 14, 21, 89, 802, 919, 1114, 1488 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 31, 231, 538, 1190, 1256, 1307, 1510 |
| BseMI | GCAATG | 1 cut(s) | 1266 |
| BseMII | CTCAG | 6 cut(s) | 440, 479, 997, 1050, 1169, 1235 |
| BseNI | ACTGG | 1 cut(s) | 1184 |
| BseX3I | CGGCCG | 1 cut(s) | 64 |
| BseXI | GCAGC | 4 cut(s) | 129, 252, 1063, 1464 |
| BseYI | CCCAGC | 3 cut(s) | 122, 245, 527 |
| Bsh1236I | CGCG | 2 cut(s) | 1303, 1427 |
| Bsh1285I | CGRYCG | 1 cut(s) | 67 |
| BshFI | GGCC | 7 cut(s) | 10, 66, 216, 349, 1195, 1249, 1396 |
| BshNI | GGYRCC | 1 cut(s) | 69 |
| BsiEI | CGRYCG | 1 cut(s) | 67 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1433 |
| BsiHKCI | CYCGRG | 2 cut(s) | 172, 295 |
| BsiSI | CCGG | 7 cut(s) | 32, 67, 93, 218, 350, 397, 1511 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 31, 231, 538, 1190, 1256, 1307, 1510 |
| BsmAI | GTCTC | 2 cut(s) | 31, 984 |
| BsmBI | CGTCTC | 1 cut(s) | 31 |
| BsnI | GGCC | 7 cut(s) | 10, 66, 216, 349, 1195, 1249, 1396 |
| BsoBI | CYCGRG | 2 cut(s) | 172, 295 |
| Bsp119I | TTCGAA | 2 cut(s) | 722, 950 |
| Bsp1286I | GDGCHC | 3 cut(s) | 302, 1243, 1433 |
| Bsp143I | GATC | 2 cut(s) | 52, 808 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1421 |
| Bsp19I | CCATGG | 1 cut(s) | 1071 |
| BspANI | GGCC | 7 cut(s) | 10, 66, 216, 349, 1195, 1249, 1396 |
| BspCNI | CTCAG | 6 cut(s) | 441, 480, 996, 1051, 1168, 1236 |
| BspFNI | CGCG | 2 cut(s) | 1303, 1427 |
| BspHI | TCATGA | 2 cut(s) | 1497, 1592 |
| BspLI | GGNNCC | 3 cut(s) | 71, 348, 386 |
| BspPI | GGATC | 1 cut(s) | 816 |
| BspQI | GCTCTTC | 1 cut(s) | 878 |
| BspT104I | TTCGAA | 2 cut(s) | 722, 950 |
| BspT107I | GGYRCC | 1 cut(s) | 69 |
| BsrBI | CCGCTC | 2 cut(s) | 265, 592 |
| BsrDI | GCAATG | 1 cut(s) | 1266 |
| BsrFI | RCCGGY | 1 cut(s) | 66 |
| BsrI | ACTGG | 1 cut(s) | 1184 |
| BssAI | RCCGGY | 1 cut(s) | 66 |
| BssECI | CCNNGG | 8 cut(s) | 171, 197, 225, 332, 536, 1071, 1301, 1354 |
| BssMI | GATC | 2 cut(s) | 52, 808 |
| BssNI | GRCGYC | 2 cut(s) | 235, 524 |
| BssSI | CACGAG | 1 cut(s) | 56 |
| BssT1I | CCWWGG | 6 cut(s) | 197, 225, 332, 536, 1071, 1354 |
| Bst2BI | CACGAG | 1 cut(s) | 56 |
| Bst2UI | CCWGG | 1 cut(s) | 1251 |
| Bst4CI | ACNGT | 3 cut(s) | 47, 389, 929 |
| Bst6I | CTCTTC | 5 cut(s) | 704, 795, 856, 878, 1086 |
| BstACI | GRCGYC | 2 cut(s) | 235, 524 |
| BstBI | TTCGAA | 2 cut(s) | 722, 950 |
| BstC8I | GCNNGC | 5 cut(s) | 302, 533, 890, 1388, 1429 |
| BstDEI | CTNAG | 8 cut(s) | 449, 488, 983, 1059, 1155, 1244, 1421, 1538 |
| BstDSI | CCRYGG | 2 cut(s) | 1071, 1301 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1254 |
| BstF5I | GGATG | 7 cut(s) | 14, 21, 89, 802, 919, 1114, 1488 |
| BstFNI | CGCG | 2 cut(s) | 1303, 1427 |
| BstH2I | RGCGCY | 1 cut(s) | 1470 |
| BstHHI | GCGC | 3 cut(s) | 729, 1427, 1469 |
| BstKTI | GATC | 2 cut(s) | 55, 811 |
| BstMAI | GTCTC | 2 cut(s) | 31, 984 |
| BstMBI | GATC | 2 cut(s) | 52, 808 |
| BstMCI | CGRYCG | 1 cut(s) | 67 |
| BstNI | CCWGG | 1 cut(s) | 1251 |
| BstSCI | CCNGG | 3 cut(s) | 216, 1249, 1510 |
| BstUI | CGCG | 2 cut(s) | 1303, 1427 |
| BstV1I | GCAGC | 4 cut(s) | 129, 252, 1063, 1464 |
| BstV2I | GAAGAC | 1 cut(s) | 930 |
| BstZI | CGGCCG | 1 cut(s) | 64 |
| BsuRI | GGCC | 7 cut(s) | 10, 66, 216, 349, 1195, 1249, 1396 |
| BtgI | CCRYGG | 2 cut(s) | 1071, 1301 |
| BtsCI | GGATG | 7 cut(s) | 14, 21, 89, 802, 919, 1114, 1488 |
| BtsIMutI | CAGTG | 2 cut(s) | 934, 1191 |
| Cac8I | GCNNGC | 5 cut(s) | 302, 533, 890, 1388, 1429 |
| CaiI | CAGNNNCTG | 2 cut(s) | 487, 1458 |
| CciI | TCATGA | 2 cut(s) | 1497, 1592 |
| CfoI | GCGC | 3 cut(s) | 729, 1427, 1469 |
| Cfr10I | RCCGGY | 1 cut(s) | 66 |
| Cfr13I | GGNCC | 5 cut(s) | 215, 347, 394, 1193, 1489 |
| Cfr42I | CCGCGG | 1 cut(s) | 1304 |
| CseI | GACGC | 3 cut(s) | 101, 224, 532 |
| Csp6I | GTAC | 2 cut(s) | 70, 463 |
| CviAII | CATG | 6 cut(s) | 1072, 1398, 1440, 1498, 1546, 1593 |
| CviQI | GTAC | 2 cut(s) | 70, 463 |
| DdeI | CTNAG | 8 cut(s) | 449, 488, 983, 1059, 1155, 1244, 1421, 1538 |
| DpnI | GATC | 2 cut(s) | 54, 810 |
| DpnII | GATC | 2 cut(s) | 52, 808 |
| EaeI | YGGCCR | 2 cut(s) | 64, 1394 |
| EagI | CGGCCG | 1 cut(s) | 64 |
| Eam1104I | CTCTTC | 5 cut(s) | 704, 795, 856, 878, 1086 |
| EarI | CTCTTC | 5 cut(s) | 704, 795, 856, 878, 1086 |
| EclXI | CGGCCG | 1 cut(s) | 64 |
| Eco130I | CCWWGG | 6 cut(s) | 197, 225, 332, 536, 1071, 1354 |
| Eco147I | AGGCCT | 1 cut(s) | 1249 |
| Eco24I | GRGCYC | 2 cut(s) | 302, 1243 |
| Eco47I | GGWCC | 2 cut(s) | 394, 1489 |
| Eco52I | CGGCCG | 1 cut(s) | 64 |
| Eco57I | CTGAAG | 2 cut(s) | 461, 1236 |
| Eco88I | CYCGRG | 2 cut(s) | 172, 295 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1254 |
| EcoRI | GAATTC | 1 cut(s) | 560 |
| EcoRII | CCWGG | 1 cut(s) | 1249 |
| EcoT14I | CCWWGG | 6 cut(s) | 197, 225, 332, 536, 1071, 1354 |
| EcoT38I | GRGCYC | 2 cut(s) | 302, 1243 |
| ErhI | CCWWGG | 6 cut(s) | 197, 225, 332, 536, 1071, 1354 |
| Esp3I | CGTCTC | 1 cut(s) | 31 |
| FaeI | CATG | 6 cut(s) | 1075, 1401, 1443, 1501, 1549, 1596 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1305, 1337 |
| FatI | CATG | 6 cut(s) | 1071, 1397, 1439, 1497, 1545, 1592 |
| FauI | CCCGC | 3 cut(s) | 374, 540, 1379 |
| Fnu4HI | GCNGC | 8 cut(s) | 118, 157, 241, 266, 280, 1077, 1453, 1456 |
| FokI | GGATG | 6 cut(s) | 8, 76, 809, 926, 1121, 1495 |
| FriOI | GRGCYC | 2 cut(s) | 302, 1243 |
| Fsp4HI | GCNGC | 8 cut(s) | 118, 157, 241, 266, 280, 1077, 1453, 1456 |
| FspBI | CTAG | 6 cut(s) | 186, 198, 321, 333, 537, 1209 |
| GlaI | GCGC | 3 cut(s) | 728, 1426, 1468 |
| GluI | GCNGC | 8 cut(s) | 118, 157, 241, 266, 280, 1077, 1453, 1456 |
| GsaI | CCCAGC | 3 cut(s) | 126, 249, 531 |
| HaeII | RGCGCY | 1 cut(s) | 1470 |
| HaeIII | GGCC | 7 cut(s) | 10, 66, 216, 349, 1195, 1249, 1396 |
| HapII | CCGG | 7 cut(s) | 32, 67, 93, 218, 350, 397, 1511 |
| HgaI | GACGC | 3 cut(s) | 101, 224, 532 |
| HhaI | GCGC | 3 cut(s) | 729, 1427, 1469 |
| Hin1I | GRCGYC | 2 cut(s) | 235, 524 |
| Hin1II | CATG | 6 cut(s) | 1075, 1401, 1443, 1501, 1549, 1596 |
| Hin6I | GCGC | 3 cut(s) | 727, 1425, 1467 |
| HinP1I | GCGC | 3 cut(s) | 727, 1425, 1467 |
| HpaII | CCGG | 7 cut(s) | 32, 67, 93, 218, 350, 397, 1511 |
| HphI | GGTGA | 3 cut(s) | 794, 1265, 1271 |
| Hpy166II | GTNNAC | 1 cut(s) | 1555 |
| Hpy188III | TCNNGA | 7 cut(s) | 56, 174, 392, 475, 744, 1498, 1593 |
| Hpy8I | GTNNAC | 1 cut(s) | 1555 |
| Hpy99I | CGWCG | 3 cut(s) | 117, 240, 434 |
| HpyAV | CCTTC | 8 cut(s) | 436, 634, 773, 1039, 1099, 1211, 1250, 1509 |
| HpyCH4III | ACNGT | 3 cut(s) | 47, 389, 929 |
| HpyCH4V | TGCA | 2 cut(s) | 1271, 1452 |
| HpyF3I | CTNAG | 8 cut(s) | 449, 488, 983, 1059, 1155, 1244, 1421, 1538 |
| Hsp92I | GRCGYC | 2 cut(s) | 235, 524 |
| Hsp92II | CATG | 6 cut(s) | 1075, 1401, 1443, 1501, 1549, 1596 |
| HspAI | GCGC | 3 cut(s) | 727, 1425, 1467 |
| KpnI | GGTACC | 1 cut(s) | 73 |
| KspI | CCGCGG | 1 cut(s) | 1304 |
| Kzo9I | GATC | 2 cut(s) | 52, 808 |
| LguI | GCTCTTC | 1 cut(s) | 878 |
| LmnI | GCTCC | 3 cut(s) | 436, 589, 855 |
| Lsp1109I | GCAGC | 4 cut(s) | 129, 252, 1063, 1464 |
| LweI | GCATC | 3 cut(s) | 1057, 1252, 1524 |
| MaeI | CTAG | 6 cut(s) | 186, 198, 321, 333, 537, 1209 |
| MalI | GATC | 2 cut(s) | 54, 810 |
| MbiI | CCGCTC | 2 cut(s) | 265, 592 |
| MboI | GATC | 2 cut(s) | 52, 808 |
| MhlI | GDGCHC | 3 cut(s) | 302, 1243, 1433 |
| MlsI | TGGCCA | 1 cut(s) | 1396 |
| MluCI | AATT | 3 cut(s) | 368, 518, 560 |
| MluNI | TGGCCA | 1 cut(s) | 1396 |
| MlyI | GAGTC | 7 cut(s) | 80, 347, 434, 662, 917, 1013, 1031 |
| MmeI | TCCRAC | 6 cut(s) | 108, 453, 891, 968, 987, 1467 |
| Mox20I | TGGCCA | 1 cut(s) | 1396 |
| MroXI | GAANNNNTTC | 1 cut(s) | 368 |
| MscI | TGGCCA | 1 cut(s) | 1396 |
| MseI | TTAA | 1 cut(s) | 1137 |
| Msp20I | TGGCCA | 1 cut(s) | 1396 |
| MspA1I | CMGCKG | 2 cut(s) | 1303, 1455 |
| MspI | CCGG | 7 cut(s) | 32, 67, 93, 218, 350, 397, 1511 |
| MspR9I | CCNGG | 3 cut(s) | 218, 1251, 1512 |
| MvaI | CCWGG | 1 cut(s) | 1251 |
| MvnI | CGCG | 2 cut(s) | 1303, 1427 |
| NciI | CCSGG | 2 cut(s) | 218, 1512 |
| NcoI | CCATGG | 1 cut(s) | 1071 |
| NdeII | GATC | 2 cut(s) | 52, 808 |
| NlaIII | CATG | 6 cut(s) | 1075, 1401, 1443, 1501, 1549, 1596 |
| NlaIV | GGNNCC | 3 cut(s) | 71, 348, 386 |
| NmeAIII | GCCGAG | 1 cut(s) | 211 |
| NspV | TTCGAA | 2 cut(s) | 722, 950 |
| PagI | TCATGA | 2 cut(s) | 1497, 1592 |
| PceI | AGGCCT | 1 cut(s) | 1249 |
| PciSI | GCTCTTC | 1 cut(s) | 878 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 267 |
| PdmI | GAANNNNTTC | 1 cut(s) | 368 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1190 |
| PfoI | TCCNGGA | 1 cut(s) | 1510 |
| PkrI | GCNGC | 8 cut(s) | 119, 158, 242, 267, 281, 1078, 1454, 1457 |
| PleI | GAGTC | 7 cut(s) | 80, 347, 433, 661, 916, 1012, 1031 |
| PpsI | GAGTC | 7 cut(s) | 80, 347, 433, 661, 916, 1012, 1031 |
| Psp6I | CCWGG | 1 cut(s) | 1249 |
| PspFI | CCCAGC | 3 cut(s) | 122, 245, 527 |
| PspGI | CCWGG | 1 cut(s) | 1249 |
| PspN4I | GGNNCC | 3 cut(s) | 71, 348, 386 |
| PspPI | GGNCC | 5 cut(s) | 215, 347, 394, 1193, 1489 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 53, 85 |
| PstNI | CAGNNNCTG | 2 cut(s) | 487, 1458 |
| RsaI | GTAC | 2 cut(s) | 71, 464 |
| RsaNI | GTAC | 2 cut(s) | 70, 463 |
| SacII | CCGCGG | 1 cut(s) | 1304 |
| SapI | GCTCTTC | 1 cut(s) | 878 |
| SaqAI | TTAA | 1 cut(s) | 1137 |
| SatI | GCNGC | 8 cut(s) | 118, 157, 241, 266, 280, 1077, 1453, 1456 |
| Sau3AI | GATC | 2 cut(s) | 52, 808 |
| Sau96I | GGNCC | 5 cut(s) | 215, 347, 394, 1193, 1489 |
| SchI | GAGTC | 7 cut(s) | 80, 347, 434, 662, 917, 1013, 1031 |
| ScrFI | CCNGG | 3 cut(s) | 218, 1251, 1512 |
| SduI | GDGCHC | 3 cut(s) | 302, 1243, 1433 |
| SfaNI | GCATC | 3 cut(s) | 1057, 1252, 1524 |
| Sfr303I | CCGCGG | 1 cut(s) | 1304 |
| SfuI | TTCGAA | 2 cut(s) | 722, 950 |
| SgrBI | CCGCGG | 1 cut(s) | 1304 |
| SinI | GGWCC | 2 cut(s) | 394, 1489 |
| SmlI | CTYRAG | 1 cut(s) | 473 |
| SmoI | CTYRAG | 1 cut(s) | 473 |
| Sse9I | AATT | 3 cut(s) | 368, 518, 560 |
| SseBI | AGGCCT | 1 cut(s) | 1249 |
| SspI | AATATT | 1 cut(s) | 613 |
| SspMI | CTAG | 6 cut(s) | 186, 198, 321, 333, 537, 1209 |
| StuI | AGGCCT | 1 cut(s) | 1249 |
| StyD4I | CCNGG | 3 cut(s) | 216, 1249, 1510 |
| StyI | CCWWGG | 6 cut(s) | 197, 225, 332, 536, 1071, 1354 |
| TaaI | ACNGT | 3 cut(s) | 47, 389, 929 |
| TaqI | TCGA | 8 cut(s) | 456, 695, 722, 743, 830, 950, 1149, 1573 |
| TasI | AATT | 3 cut(s) | 368, 518, 560 |
| TatI | WGTACW | 1 cut(s) | 462 |
| TauI | GCSGC | 4 cut(s) | 159, 268, 282, 1458 |
| Tru1I | TTAA | 1 cut(s) | 1137 |
| Tru9I | TTAA | 1 cut(s) | 1137 |
| TscAI | CASTG | 2 cut(s) | 934, 1191 |
| TseI | GCWGC | 4 cut(s) | 117, 240, 1076, 1452 |
| TspDTI | ATGAA | 6 cut(s) | 804, 813, 1118, 1194, 1534, 1581 |
| TspGWI | ACGGA | 1 cut(s) | 222 |
| TspRI | CASTG | 2 cut(s) | 934, 1191 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1190 |
| VpaK11BI | GGWCC | 2 cut(s) | 394, 1489 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1254 |
| XapI | RAATTY | 2 cut(s) | 368, 560 |
| XmaJI | CCTAGG | 3 cut(s) | 197, 332, 536 |
| XmnI | GAANNNNTTC | 1 cut(s) | 368 |
| XspI | CTAG | 6 cut(s) | 186, 198, 321, 333, 537, 1209 |