pycom11g26550

Dephospho-CoA kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
29085163 .. 29085387
225 bp
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UTR
Exon/CDS
Intron
pycom11g26550.1

Sequence Viewer

Length: 225 bp
ATGTCACTCGATTTGAAAAGGACCAAGGCAGACATAGTGGTTGACAACACTGGATCGCTAGACGATTTAAGAGAACAGTTTCGCAATGTCTTGCTTGAAGTCACAAAGCCCTTGACATGGACCGAATTCGGGCTTTCTAGACAAGGTGCCTCGTCCGTTCTTGTCTCCATCATCGTAGGTGTTCTTATATTCAAGAAAGTCTTGTATAAGTCAGAGTTTATGTAG

Protein Analysis

75

Amino Acids

8.36

Weight (kDa)

8.06

Isoelectric Point (pI)

18.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016964)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 146
AclWI GGATC 1 cut(s) 61
AcsI RAATTY 1 cut(s) 125
AfiI CCNNNNNNNGG 2 cut(s) 117, 129
AgsI TTSAA 3 cut(s) 16, 98, 193
Alw26I GTCTC 1 cut(s) 169
AlwI GGATC 1 cut(s) 61
ApoI RAATTY 1 cut(s) 125
Asp700I GAANNNNTTC 1 cut(s) 78
AspS9I GGNCC 2 cut(s) 21, 120
AvaII GGWCC 2 cut(s) 21, 120
BanI GGYRCC 1 cut(s) 146
BccI CCATC 1 cut(s) 176
BcoDI GTCTC 1 cut(s) 169
BfaI CTAG 2 cut(s) 59, 138
Bme18I GGWCC 2 cut(s) 21, 120
BmgT120I GGNCC 2 cut(s) 21, 120
BmiI GGNNCC 1 cut(s) 148
BsaJI CCNNGG 1 cut(s) 24
Bsc4I CCNNNNNNNGG 2 cut(s) 117, 129
Bse1I ACTGG 1 cut(s) 55
Bse3DI GCAATG 1 cut(s) 91
BseDI CCNNGG 1 cut(s) 24
BseLI CCNNNNNNNGG 2 cut(s) 117, 129
BseMI GCAATG 1 cut(s) 91
BseNI ACTGG 1 cut(s) 55
BshNI GGYRCC 1 cut(s) 146
BslI CCNNNNNNNGG 2 cut(s) 117, 129
BsmAI GTCTC 1 cut(s) 169
Bsp143I GATC 1 cut(s) 53
BspLI GGNNCC 1 cut(s) 148
BspPI GGATC 1 cut(s) 61
BspT107I GGYRCC 1 cut(s) 146
BsrDI GCAATG 1 cut(s) 91
BsrI ACTGG 1 cut(s) 55
BssECI CCNNGG 1 cut(s) 24
BssMI GATC 1 cut(s) 53
BssT1I CCWWGG 1 cut(s) 24
Bst4CI ACNGT 1 cut(s) 78
BstKTI GATC 1 cut(s) 56
BstMAI GTCTC 1 cut(s) 169
BstMBI GATC 1 cut(s) 53
BtsIMutI CAGTG 1 cut(s) 48
Cfr13I GGNCC 2 cut(s) 21, 120
CviAII CATG 1 cut(s) 117
CviJI RGCY 2 cut(s) 109, 133
CviKI_1 RGCY 2 cut(s) 109, 133
DpnI GATC 1 cut(s) 55
DpnII GATC 1 cut(s) 53
Eco130I CCWWGG 1 cut(s) 24
Eco47I GGWCC 2 cut(s) 21, 120
EcoRI GAATTC 1 cut(s) 125
EcoT14I CCWWGG 1 cut(s) 24
ErhI CCWWGG 1 cut(s) 24
FaeI CATG 1 cut(s) 120
FaiI YATR 5 cut(s) 35, 118, 188, 207, 221
FalI AAGNNNNNCTT 2 cut(s) 185, 217
FatI CATG 1 cut(s) 116
FspBI CTAG 2 cut(s) 59, 138
Hin1II CATG 1 cut(s) 120
HincII GTYRAC 1 cut(s) 43
HindII GTYRAC 1 cut(s) 43
Hpy166II GTNNAC 1 cut(s) 43
Hpy188I TCNGA 1 cut(s) 214
Hpy188III TCNNGA 2 cut(s) 138, 193
Hpy8I GTNNAC 1 cut(s) 43
HpyCH4III ACNGT 1 cut(s) 78
Hsp92II CATG 1 cut(s) 120
Kzo9I GATC 1 cut(s) 53
LpnPI CCDG 1 cut(s) 36
MaeI CTAG 2 cut(s) 59, 138
MaeIII GTNAC 2 cut(s) 3, 100
MalI GATC 1 cut(s) 55
MboI GATC 1 cut(s) 53
MluCI AATT 1 cut(s) 125
MnlI CCTC 1 cut(s) 160
MroXI GAANNNNTTC 1 cut(s) 78
MseI TTAA 1 cut(s) 68
NdeII GATC 1 cut(s) 53
NlaIII CATG 1 cut(s) 120
NlaIV GGNNCC 1 cut(s) 148
NmuCI GTSAC 2 cut(s) 3, 100
PdmI GAANNNNTTC 1 cut(s) 78
PspN4I GGNNCC 1 cut(s) 148
PspPI GGNCC 2 cut(s) 21, 120
SaqAI TTAA 1 cut(s) 68
Sau3AI GATC 1 cut(s) 53
Sau96I GGNCC 2 cut(s) 21, 120
SetI ASST 2 cut(s) 148, 181
SinI GGWCC 2 cut(s) 21, 120
Sse9I AATT 1 cut(s) 125
SspMI CTAG 2 cut(s) 59, 138
StyI CCWWGG 1 cut(s) 24
TaaI ACNGT 1 cut(s) 78
TaqI TCGA 1 cut(s) 9
TaqII GACCGA 1 cut(s) 137
TasI AATT 1 cut(s) 125
Tru1I TTAA 1 cut(s) 68
Tru9I TTAA 1 cut(s) 68
TscAI CASTG 1 cut(s) 55
TseFI GTSAC 2 cut(s) 3, 100
Tsp45I GTSAC 2 cut(s) 3, 100
TspGWI ACGGA 1 cut(s) 145
TspRI CASTG 1 cut(s) 55
VpaK11BI GGWCC 2 cut(s) 21, 120
XapI RAATTY 1 cut(s) 125
XbaI TCTAGA 1 cut(s) 137
XmnI GAANNNNTTC 1 cut(s) 78
XspI CTAG 2 cut(s) 59, 138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.