RchiOBHm_Chr4g0419031

Dephospho-CoA kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
44548292 .. 44548594
303 bp
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UTR
Exon/CDS
Intron
PRQ38897

Sequence Viewer

Length: 303 bp
ATGTTGAGGGACAGAACAAGTGGGGATGATGCTCGAAATCAGATAAATGCTCAGATGTCACTCAATTTAAAGAGGGCTAAGGCAAACATAGTGATTGATAACACTGGATCACAAGAGAAGTTTAAGAGTGTGCTATTTGAGGTCACAAAGCCCTTGACATGGATTGAATTTTGGCTTCCTCGACAAGGTGCTCCATCTGCTCTTGTCTCCATCATCGTAGGTGTTCTTATGTTTAGAAAAGTTTATGATAGTGATAGTGAATTATACAACTTCAGAGTTGTACTTATTGAGATATTGATCTAA

Protein Analysis

100

Amino Acids

11.44

Weight (kDa)

9.15

Isoelectric Point (pI)

42.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016964)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 115
AcsI RAATTY 1 cut(s) 167
AcuI CTGAAG 1 cut(s) 256
AfaI GTAC 1 cut(s) 282
AfiI CCNNNNNNNGG 2 cut(s) 159, 185
AgsI TTSAA 1 cut(s) 167
Alw21I GWGCWC 1 cut(s) 193
Alw26I GTCTC 1 cut(s) 211
AlwI GGATC 1 cut(s) 115
ApoI RAATTY 1 cut(s) 167
Bbv12I GWGCWC 1 cut(s) 193
BccI CCATC 2 cut(s) 202, 218
BcoDI GTCTC 1 cut(s) 211
BmsI GCATC 1 cut(s) 19
Bpu10I CCTNAGC 1 cut(s) 78
BsaBI GATNNNNATC 1 cut(s) 296
Bsc4I CCNNNNNNNGG 2 cut(s) 159, 185
Bse1I ACTGG 1 cut(s) 109
Bse8I GATNNNNATC 1 cut(s) 296
BseGI GGATG 1 cut(s) 31
BseJI GATNNNNATC 1 cut(s) 296
BseLI CCNNNNNNNGG 2 cut(s) 159, 185
BseMII CTCAG 1 cut(s) 65
BseNI ACTGG 1 cut(s) 109
BsiHKAI GWGCWC 1 cut(s) 193
BslFI GGGAC 1 cut(s) 23
BslI CCNNNNNNNGG 2 cut(s) 159, 185
BsmAI GTCTC 1 cut(s) 211
BsmFI GGGAC 1 cut(s) 23
Bsp1286I GDGCHC 1 cut(s) 193
Bsp143I GATC 2 cut(s) 107, 297
BspCNI CTCAG 1 cut(s) 64
BspPI GGATC 1 cut(s) 115
BsrI ACTGG 1 cut(s) 109
BssMI GATC 2 cut(s) 107, 297
BstDEI CTNAG 2 cut(s) 51, 78
BstENI CCTNNNNNAGG 1 cut(s) 183
BstF5I GGATG 1 cut(s) 31
BstKTI GATC 2 cut(s) 110, 300
BstMAI GTCTC 1 cut(s) 211
BstMBI GATC 2 cut(s) 107, 297
BstMWI GCNNNNNNNGC 1 cut(s) 197
BtsCI GGATG 1 cut(s) 31
BtsIMutI CAGTG 1 cut(s) 102
Csp6I GTAC 1 cut(s) 281
CviAII CATG 1 cut(s) 159
CviJI RGCY 3 cut(s) 77, 151, 175
CviKI_1 RGCY 3 cut(s) 77, 151, 175
CviQI GTAC 1 cut(s) 281
DdeI CTNAG 2 cut(s) 51, 78
DpnI GATC 2 cut(s) 109, 299
DpnII GATC 2 cut(s) 107, 297
DraI TTTAAA 1 cut(s) 69
Eco57I CTGAAG 1 cut(s) 256
EcoNI CCTNNNNNAGG 1 cut(s) 183
FaeI CATG 1 cut(s) 162
FaiI YATR 5 cut(s) 89, 160, 230, 246, 265
FaqI GGGAC 1 cut(s) 23
FatI CATG 1 cut(s) 158
FokI GGATG 1 cut(s) 38
Hin1II CATG 1 cut(s) 162
Hpy188I TCNGA 3 cut(s) 42, 54, 275
HpyF10VI GCNNNNNNNGC 1 cut(s) 197
HpyF3I CTNAG 2 cut(s) 51, 78
Hsp92II CATG 1 cut(s) 162
Kzo9I GATC 2 cut(s) 107, 297
LmnI GCTCC 1 cut(s) 196
LpnPI CCDG 1 cut(s) 90
LweI GCATC 1 cut(s) 19
MaeIII GTNAC 2 cut(s) 57, 142
MalI GATC 2 cut(s) 109, 299
MboI GATC 2 cut(s) 107, 297
MhlI GDGCHC 1 cut(s) 193
MluCI AATT 3 cut(s) 64, 167, 260
MnlI CCTC 3 cut(s) 66, 133, 189
MseI TTAA 2 cut(s) 68, 123
MwoI GCNNNNNNNGC 1 cut(s) 197
NdeII GATC 2 cut(s) 107, 297
NlaIII CATG 1 cut(s) 162
NmuCI GTSAC 2 cut(s) 57, 142
RsaI GTAC 1 cut(s) 282
RsaNI GTAC 1 cut(s) 281
SaqAI TTAA 2 cut(s) 68, 123
Sau3AI GATC 2 cut(s) 107, 297
SduI GDGCHC 1 cut(s) 193
SetI ASST 3 cut(s) 144, 190, 223
SfaNI GCATC 1 cut(s) 19
SgeI CNNG 9 cut(s) 30, 45, 117, 125, 166, 171, 192, 197, 215
Sse9I AATT 3 cut(s) 64, 167, 260
TaqI TCGA 2 cut(s) 34, 181
TasI AATT 3 cut(s) 64, 167, 260
TatI WGTACW 1 cut(s) 280
Tru1I TTAA 2 cut(s) 68, 123
Tru9I TTAA 2 cut(s) 68, 123
TscAI CASTG 1 cut(s) 109
TseFI GTSAC 2 cut(s) 57, 142
Tsp45I GTSAC 2 cut(s) 57, 142
TspRI CASTG 1 cut(s) 109
XagI CCTNNNNNAGG 1 cut(s) 183
XapI RAATTY 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.