Rh1AG132300

Dephospho-CoA kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
25043434 .. 25045935
2502 bp
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UTR
Exon/CDS
Intron
Rh1AG132300.1

Sequence Viewer

Length: 252 bp
ATGGCAGACATGGTGATTGATAACACTGGATCACAAGAGGATTTAAAAGACAAGTTTAGAAGTGTGGTATTTGAGGTCACAAAGCCCTTGTCATGGACTGAACTTTGGCTTTCTCACCAAGGTGCTTCATCTGCTCTTGTCTCCATTATCGGAGCAGTGTTCACATACAGAGAAGAATTCACTGGATTTGCACACTTCAAGAAAGTTACAAGATATGAATATGGCCAGACTGTTTCACCTATTGAATCATAA

Protein Analysis

83

Amino Acids

9.41

Weight (kDa)

5.21

Isoelectric Point (pI)

26.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016964)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 37
AcoI YGGCCR 1 cut(s) 223
AcsI RAATTY 1 cut(s) 176
AfiI CCNNNNNNNGG 1 cut(s) 93
AgsI TTSAA 2 cut(s) 199, 245
AleI CACNNNNGTG 1 cut(s) 120
Alw26I GTCTC 1 cut(s) 145
AlwI GGATC 1 cut(s) 37
AoxI GGCC 1 cut(s) 223
ApoI RAATTY 1 cut(s) 176
ArsI GACNNNNNNTTYG 2 cut(s) 74, 106
AsuHPI GGTGA 3 cut(s) 25, 107, 228
BalI TGGCCA 1 cut(s) 225
BcoDI GTCTC 1 cut(s) 145
BsaJI CCNNGG 1 cut(s) 118
Bsc4I CCNNNNNNNGG 1 cut(s) 93
Bse1I ACTGG 2 cut(s) 31, 187
BseDI CCNNGG 1 cut(s) 118
BseLI CCNNNNNNNGG 1 cut(s) 93
BseNI ACTGG 2 cut(s) 31, 187
BshFI GGCC 1 cut(s) 225
BslI CCNNNNNNNGG 1 cut(s) 93
BsmAI GTCTC 1 cut(s) 145
BsnI GGCC 1 cut(s) 225
Bsp143I GATC 1 cut(s) 29
BspANI GGCC 1 cut(s) 225
BspPI GGATC 1 cut(s) 37
BsrI ACTGG 2 cut(s) 31, 187
BssECI CCNNGG 1 cut(s) 118
BssMI GATC 1 cut(s) 29
BssT1I CCWWGG 1 cut(s) 118
Bst4CI ACNGT 1 cut(s) 232
BstKTI GATC 1 cut(s) 32
BstMAI GTCTC 1 cut(s) 145
BstMBI GATC 1 cut(s) 29
BstMWI GCNNNNNNNGC 1 cut(s) 131
BsuRI GGCC 1 cut(s) 225
BtsI GCAGTG 1 cut(s) 162
BtsIMutI CAGTG 3 cut(s) 24, 162, 180
CviAII CATG 2 cut(s) 10, 93
CviJI RGCY 3 cut(s) 85, 109, 225
CviKI_1 RGCY 3 cut(s) 85, 109, 225
DpnI GATC 1 cut(s) 31
DpnII GATC 1 cut(s) 29
DraI TTTAAA 1 cut(s) 45
EaeI YGGCCR 1 cut(s) 223
Eco130I CCWWGG 1 cut(s) 118
EcoRI GAATTC 1 cut(s) 176
EcoT14I CCWWGG 1 cut(s) 118
ErhI CCWWGG 1 cut(s) 118
FaeI CATG 2 cut(s) 13, 96
FaiI YATR 6 cut(s) 11, 94, 166, 216, 222, 250
FatI CATG 2 cut(s) 9, 92
HaeIII GGCC 1 cut(s) 225
Hin1II CATG 2 cut(s) 13, 96
HinfI GANTC 1 cut(s) 245
HphI GGTGA 3 cut(s) 25, 107, 228
Hpy166II GTNNAC 1 cut(s) 162
Hpy188I TCNGA 1 cut(s) 152
Hpy188III TCNNGA 1 cut(s) 199
Hpy8I GTNNAC 1 cut(s) 162
HpyCH4III ACNGT 1 cut(s) 232
HpyCH4V TGCA 1 cut(s) 191
HpyF10VI GCNNNNNNNGC 1 cut(s) 131
Hsp92II CATG 2 cut(s) 13, 96
Kzo9I GATC 1 cut(s) 29
LmnI GCTCC 1 cut(s) 152
LpnPI CCDG 3 cut(s) 12, 168, 239
MaeIII GTNAC 2 cut(s) 76, 205
MalI GATC 1 cut(s) 31
MboI GATC 1 cut(s) 29
MboII GAAGA 1 cut(s) 185
MlsI TGGCCA 1 cut(s) 225
MluCI AATT 1 cut(s) 176
MluNI TGGCCA 1 cut(s) 225
MnlI CCTC 2 cut(s) 31, 67
Mox20I TGGCCA 1 cut(s) 225
MscI TGGCCA 1 cut(s) 225
MseI TTAA 1 cut(s) 44
MslI CAYNNNNRTG 1 cut(s) 120
Msp20I TGGCCA 1 cut(s) 225
MwoI GCNNNNNNNGC 1 cut(s) 131
NdeII GATC 1 cut(s) 29
NlaIII CATG 2 cut(s) 13, 96
NmuCI GTSAC 1 cut(s) 76
OliI CACNNNNGTG 1 cut(s) 120
PfeI GAWTC 1 cut(s) 245
RseI CAYNNNNRTG 1 cut(s) 120
SaqAI TTAA 1 cut(s) 44
Sau3AI GATC 1 cut(s) 29
SetI ASST 3 cut(s) 78, 124, 241
SmiMI CAYNNNNRTG 1 cut(s) 120
Sse9I AATT 1 cut(s) 176
StyI CCWWGG 1 cut(s) 118
TaaI ACNGT 1 cut(s) 232
TasI AATT 1 cut(s) 176
TfiI GAWTC 1 cut(s) 245
Tru1I TTAA 1 cut(s) 44
Tru9I TTAA 1 cut(s) 44
TscAI CASTG 3 cut(s) 31, 162, 187
TseFI GTSAC 1 cut(s) 76
Tsp45I GTSAC 1 cut(s) 76
TspDTI ATGAA 2 cut(s) 117, 231
TspRI CASTG 3 cut(s) 31, 162, 187
XapI RAATTY 1 cut(s) 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.