Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0007584

Physical Location & Seq

Genomic Coordinates Forward (+)

29310668 .. 29315772

Gene Structure 5105 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGGAGAATCGCCGTAAGTTCACTCGCGCCTTAAGCCTCAGGGAGCGCGTCGAGGACACTCTCTCCGACCACCGTAACGAACTCGTTGCCCTCCTCTCCAGGTACCTGGATCAGGGGAAAAGAATACTGCAGCCGCACGACCTGATCGATCAGCTCGACATTGTCATCGGCGACGATGAAGCCAAACAGCAGCTCAAAACCGGACCTTTCAGCGAAGTCCTCAAATCCGCACAGGAAGCCATTGTTCTGCCTCCATATGTGGCCTTAGCAGTTCGTCCAAGACCTGGTGTCTGGGATTATGTTCGTGTTAATGTATATGAGCTAAGTGTGGAGGAATTGACCGTTTCTGAATATCTTCACTTTAAAGAAGAACTTGTAGATGGGGAGTCTAGTGACAAATATGTACTTGAGCTCGACTTTGAGCCATTTAATGCTGCTTTTCCTCGTCCCACCCGATCATCATCCATTGGAAATGGTGTTCAATTTCTCAACCGCCACCTTTCTTCAATTATGTTCCGTAACAGAGAATCGTTGGATCCATTACTTGATTTCCTTAGAGTACACAAATATAAAGGCCATCCATTGATGTTGAATGATCGGATACAGAGCGTATCCAAGCTTCAGTCAGCTTTAGCTAAGGCTGAGATCGATCATCTTTCCAAGCTTCAACCCGAGACACCCTACTCTGAGTTTGAATATTTATTTCAAGGAATGGGTTTTGAGCGAGGTTGGGGCGATACTGCAGTACACGTATTGGAGATGATGCATCTTCTCTTAGATATCCTTCAGGCTCCTGATCGATCTATATTGGAGACATTCCTTGGGAGAATACCGATGGTGTTTAATGTTGTCATTTTGTCTCCACATGGATACTTTGGACAAGCAAATGTTTTAGGCTTACCCGACACTGGTGGCCAGATTGTCTATATACTGGACCAAGTGCGCGCCCTCGAAAAAGAAATGCTCGAAAGAATTCGCAAGCAAGGATTAGATTTCACGCCAAGAATCCTTATTGTGACCAGGCTAATACCTGAGGCGAAAGGAACTACATGCAATCAGAGGCTGGAAAGAATATCTGGAACCGAGCACACCCATATTTTAAGAGTTCCTTTTAGATCAGACAAAGGGATTCTTCGTAAGTCGATCTCAAGGTTTGACCTATGGCCTTATTTGGAGACCTTTGCTGAGGATGCTGCAGGTGAAATTGTTGCTGAGTTACAGGGATATCCAGATTTTATTATTGGGAATTACAGTGATGGGAATCTTGTCGCATCTTTGTTGGCTTATAAAATGGGAGTTACACAGTGTACTATTGCGCACGCATTGGAGAAAACAAAATATCCGAATTCAGATATATATTGGAAGAAATTTGAGGAGGAATACCATTTCTCAACTCAGTTCACGGCTGATCTTATTGCCATGAATAATGCAGATTTCATAATCACCAGCACATACCAAGAGATTGCAGGAACGAAGGATACGGTTGGTCAGTATGAGAGCCACAGCTCTTACACTCTTCCTGGGCAGTACCGAGTGGTTCATGGAATTAATGTCTTTGATCCAAAGTTCAATATCGTGTCTCCCGGAGCAGATATGACCATTTATTTCCCTTACTCTGAAAAGCAAAAGAGACTTACCAGCCTCCATGGTTCCCTAGAAGAGTTGCTATATAATCCTGACCAGAATGATGTTCATATTGGCACCCTAAGCGATCGATCAAAGCCCATAATATTCTCAATGGCAAGGCTCGACCAGGTGAAAAATATGACTGGGTTGGTTGAGTGCTATGCTAAATGTTCCAAACTGAGGGATCTGGCAAACCTTGTCATAGTTGCTGGTTACATTGACGCAAAGAAATCACGAGATAGAGAAGAAATTGCAGAGATTGAGAAGATGCATAATCTTATGATTGAGTACAAATTAGATGGTCAATTTCGATGGATTTCATCTCAAACTAATCGAGTTAGTAACGGTGAGCTTTATCGTTACATAGCAGATACAAGAGGTGCTTTTGCTCAGCCTGCATTTTATGAAGCTTTTGGACTCACAGTTGTGGAGGCTATGAGTTGCGGCCTTCCAACATTCGCCACAGTCCATGGTGGCCCTGCGGAGATTATTGAGCATGGTGTATCAGGGTTTCATATCGATCCTTATCATCCTGAGAAGGCTGCTGCACTTATGGCCGATTTCTTTCAACGTTGCAAGGAGGATCCTAGCTATTGGAATACAATCTCAGATGCAGGCCTCCAAAGAATTTATGAAAAGTACACATGGAAGATCTATTCTGAAAGGCTAATGACATTGGCGGGCGTTTATGGTTTCTGGAAGTATGTGTCGAAGCTTGAAAGGCGCGAGACCCGACGTTATCTGGAGATGTTCTACATTCTGAAGTTCCGTGATTTGGCAAAATCTGTTCCTGAAGCCATTGATGATGCACGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005975 GO:0005976 GO:0005982 GO:0005984 GO:0005985 GO:0006073 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009311 GO:0009414 GO:0009415 GO:0009628 GO:0009743 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010154 GO:0010431 GO:0010555 GO:0016157 GO:0016740 GO:0016757 GO:0016758 GO:0021700 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0035251 GO:0042221 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0046527 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0071695 GO:0071704 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 Sucrose_synth

Protein Analysis

814

Amino Acids

93.16

Weight (kDa)

5.81

Isoelectric Point (pI)

39.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SUS_N	PF24861	11 - 123	2.2e-48	Sucrose synthase N-terminal
SUS_EPBD	PF24862	158 - 246	1.1e-32	Sucrose synthase EPBD domain
GT-B_Sucrose_synth	PF00862	269 - 557	1.3e-163	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	569 - 732	3e-25	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	575 - 729	2.2e-12	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02280
fragaria_vesca	FvH4_2g26000 FvH4_2g26000
malus_domestica	MD11G1307000.v1.1
prunus_persica	Prupe.8G264300_v2.0.a1
pyrus_communis	pycom11g26860
rosa_chinensis	RchiOBHm_Chr3g0465391 RchiOBHm_Chr6g0294361
rosa_laevigata	RLG00000011877
rosa_multiflora	Rmu_co8254571.1_g000001 Rmu_sc0005369.1_g000012 Rmu_sc0016833.1_g000001
rosa_roxburghii	Rroxscaffold_7G00173440
rosa_rugosa	Rorug03G0273600 Rorug06G0243800
rosa_samantha	Rh2AG100600 Rh3BG141500 Rh3CG142600 Rh3DG142600 Rh6AG356400 Rh6BG363100 Rh6CG370400 Rh6DG356900
rosa_wichuraiana	Rw6G031060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1287
AarI	CACCTGC	1 cut(s)	1187
Acc16I	TGCGCA	1 cut(s)	1317
Acc36I	ACCTGC	1 cut(s)	1187
Acc65I	GGTACC	1 cut(s)	102
AccB1I	GGYRCC	2 cut(s)	102, 1700
AccB7I	CCANNNNNTGG	1 cut(s)	284
AccII	CGCG	4 cut(s)	27, 48, 945, 2352
AciI	CCGC	6 cut(s)	134, 228, 493, 2070, 2108, 2306
AclI	AACGTT	1 cut(s)	2197
AclWI	GGATC	8 cut(s)	117, 530, 543, 1553, 1818, 2141, 2204, 2217
AcoI	YGGCCR	2 cut(s)	913, 2181
AcsI	RAATTY	4 cut(s)	972, 1345, 1367, 2253
AcuI	CTGAAG	4 cut(s)	605, 770, 2408, 2439
AfaI	GTAC	8 cut(s)	104, 405, 561, 747, 1309, 1529, 1916, 2267
AfiI	CCNNNNNNNGG	5 cut(s)	112, 284, 908, 1806, 2401
AflII	CTTAAG	1 cut(s)	31
AflIII	ACRYGT	1 cut(s)	748
AgsI	TTSAA	9 cut(s)	482, 507, 592, 668, 695, 707, 1570, 2195, 2345
AhdI	GACNNNNNGTC	1 cut(s)	287
AjnI	CCWGG	6 cut(s)	98, 105, 283, 1019, 1519, 1752
AleI	CACNNNNGTG	1 cut(s)	2051
AloI	GAACNNNNNNTCC	2 cut(s)	462, 494
Alw21I	GWGCWC	2 cut(s)	414, 1089
Alw26I	GTCTC	7 cut(s)	668, 806, 864, 1169, 1584, 1624, 2348
AlwI	GGATC	8 cut(s)	117, 530, 543, 1553, 1818, 2141, 2204, 2217
AlwNI	CAGNNNCTG	1 cut(s)	1063
Ama87I	CYCGRG	1 cut(s)	671
AoxI	GGCC	8 cut(s)	261, 574, 913, 1163, 2071, 2101, 2181, 2242
ApeKI	GCWGC	6 cut(s)	130, 190, 434, 1193, 2168, 2171
ApoI	RAATTY	4 cut(s)	972, 1345, 1367, 2253
AseI	ATTAAT	1 cut(s)	1548
Asp700I	GAANNNNTTC	2 cut(s)	354, 972
Asp718I	GGTACC	1 cut(s)	102
AspLEI	GCGC	6 cut(s)	29, 48, 945, 947, 1318, 2352
AspS9I	GGNCC	3 cut(s)	203, 934, 2102
AsuC2I	CCSGG	1 cut(s)	1584
AsuHPI	GGTGA	4 cut(s)	1211, 1435, 1768, 1985
AvaI	CYCGRG	1 cut(s)	671
AvaII	GGWCC	2 cut(s)	203, 934
AxyI	CCTNAGG	2 cut(s)	38, 1032
BaeI	ACNNNNGTAYC	2 cut(s)	729, 762
BalI	TGGCCA	1 cut(s)	915
BamHI	GGATCC	2 cut(s)	535, 2209
BanI	GGYRCC	2 cut(s)	102, 1700
BanII	GRGCYC	1 cut(s)	414
BarI	GAAGNNNNNNTAC	2 cut(s)	603, 635
BauI	CACGAG	1 cut(s)	1860
Bbv12I	GWGCWC	2 cut(s)	414, 1089
BbvCI	CCTCAGC	1 cut(s)	1185
BbvI	GCAGC	6 cut(s)	142, 202, 421, 1180, 2155, 2158
BccI	CCATC	6 cut(s)	374, 585, 829, 1250, 1919, 1932
BceAI	ACGGC	1 cut(s)	1419
BcgI	CGANNNNNNTGC	2 cut(s)	68, 102
BciT130I	CCWGG	6 cut(s)	100, 107, 285, 1021, 1521, 1754
BciVI	GTATCC	4 cut(s)	594, 622, 863, 1471
BcnI	CCSGG	1 cut(s)	1584
BcoDI	GTCTC	7 cut(s)	668, 806, 864, 1169, 1584, 1624, 2348
BfaI	CTAG	3 cut(s)	390, 1655, 2214
BfmI	CTRYAG	3 cut(s)	128, 741, 1194
BfrI	CTTAAG	1 cut(s)	31
BfuAI	ACCTGC	1 cut(s)	1187
BfuI	GTATCC	4 cut(s)	594, 622, 863, 1471
BglII	AGATCT	1 cut(s)	2277
BisI	GCNGC	8 cut(s)	131, 134, 191, 435, 1194, 2071, 2169, 2172
BlpI	GCTNAGC	1 cut(s)	2016
BlsI	GCNGC	8 cut(s)	132, 135, 192, 436, 1195, 2072, 2170, 2173
Bme1390I	CCNGG	7 cut(s)	100, 107, 285, 1021, 1521, 1584, 1754
Bme18I	GGWCC	2 cut(s)	203, 934
BmeRI	GACNNNNNGTC	1 cut(s)	287
BmeT110I	CYCGRG	1 cut(s)	671
BmgT120I	GGNCC	3 cut(s)	203, 934, 2102
BmiI	GGNNCC	7 cut(s)	104, 537, 792, 1081, 1651, 1702, 2211
BmrFI	CCNGG	7 cut(s)	100, 107, 285, 1021, 1521, 1584, 1754
BmrI	ACTGGG	1 cut(s)	1779
BmsI	GCATC	7 cut(s)	753, 775, 1180, 1280, 1884, 2227, 2422
BmuI	ACTGGG	1 cut(s)	1779
BpmI	CTGGAG	2 cut(s)	82, 2390
Bpu10I	CCTNAGC	4 cut(s)	265, 636, 1185, 1706
Bpu1102I	GCTNAGC	1 cut(s)	2016
BpuEI	CTTGAG	2 cut(s)	428, 1132
BpuMI	CCSGG	1 cut(s)	1584
Bsa29I	ATCGAT	5 cut(s)	147, 648, 799, 1714, 2145
BsaAI	YACGTR	1 cut(s)	751
BsaBI	GATNNNNATC	3 cut(s)	460, 1260, 2151
BsaI	GGTCTC	2 cut(s)	1169, 2348
BsaJI	CCNNGG	4 cut(s)	820, 1520, 1645, 2095
BsaWI	WCCGGW	1 cut(s)	200
BsaXI	ACNNNNNCTCC	2 cut(s)	47, 77
Bsc4I	CCNNNNNNNGG	5 cut(s)	112, 284, 908, 1806, 2401
Bse1I	ACTGG	3 cut(s)	913, 936, 1774
Bse21I	CCTNAGG	2 cut(s)	38, 1032
Bse8I	GATNNNNATC	3 cut(s)	460, 1260, 2151
BseBI	CCWGG	6 cut(s)	100, 107, 285, 1021, 1521, 1754
BseCI	ATCGAT	5 cut(s)	147, 648, 799, 1714, 2145
BseDI	CCNNGG	4 cut(s)	820, 1520, 1645, 2095
BseGI	GGATG	4 cut(s)	461, 577, 1195, 2155
BseJI	GATNNNNATC	3 cut(s)	460, 1260, 2151
BseLI	CCNNNNNNNGG	5 cut(s)	112, 284, 908, 1806, 2401
BseNI	ACTGG	3 cut(s)	913, 936, 1774
BsePI	GCGCGC	1 cut(s)	943
BseRI	GAGGAG	2 cut(s)	83, 1388
BseXI	GCAGC	6 cut(s)	142, 202, 421, 1180, 2155, 2158
BsgI	GTGCAG	1 cut(s)	2157
Bsh1236I	CGCG	4 cut(s)	27, 48, 945, 2352
Bsh1285I	CGRYCG	1 cut(s)	1714
BshFI	GGCC	8 cut(s)	263, 576, 915, 1165, 2073, 2103, 2183, 2244
BshNI	GGYRCC	2 cut(s)	102, 1700
BshVI	ATCGAT	5 cut(s)	147, 648, 799, 1714, 2145
BsiEI	CGRYCG	1 cut(s)	1714
BsiHKAI	GWGCWC	2 cut(s)	414, 1089
BsiHKCI	CYCGRG	1 cut(s)	671
BsiSI	CCGG	2 cut(s)	201, 1584
BslFI	GGGAC	1 cut(s)	432
BslI	CCNNNNNNNGG	5 cut(s)	112, 284, 908, 1806, 2401
BsmAI	GTCTC	7 cut(s)	668, 806, 864, 1169, 1584, 1624, 2348
BsmFI	GGGAC	1 cut(s)	432
BsnI	GGCC	8 cut(s)	263, 576, 915, 1165, 2073, 2103, 2183, 2244
Bso31I	GGTCTC	2 cut(s)	1169, 2348
BsoBI	CYCGRG	1 cut(s)	671
Bsp1286I	GDGCHC	2 cut(s)	414, 1089
Bsp1720I	GCTNAGC	1 cut(s)	2016
Bsp19I	CCATGG	2 cut(s)	1645, 2095
BspACI	CCGC	6 cut(s)	134, 228, 493, 2070, 2108, 2306
BspANI	GGCC	8 cut(s)	263, 576, 915, 1165, 2073, 2103, 2183, 2244
BspDI	ATCGAT	5 cut(s)	147, 648, 799, 1714, 2145
BspFNI	CGCG	4 cut(s)	27, 48, 945, 2352
BspLI	GGNNCC	7 cut(s)	104, 537, 792, 1081, 1651, 1702, 2211
BspMAI	CTGCAG	3 cut(s)	132, 745, 1198
BspMI	ACCTGC	1 cut(s)	1187
BspPI	GGATC	8 cut(s)	117, 530, 543, 1553, 1818, 2141, 2204, 2217
BspT107I	GGYRCC	2 cut(s)	102, 1700
BspTI	CTTAAG	1 cut(s)	31
BspTNI	GGTCTC	2 cut(s)	1169, 2348
BsrI	ACTGG	3 cut(s)	913, 936, 1774
BssECI	CCNNGG	4 cut(s)	820, 1520, 1645, 2095
BssHII	GCGCGC	1 cut(s)	943
BssSI	CACGAG	1 cut(s)	1860
BssT1I	CCWWGG	3 cut(s)	820, 1645, 2095
Bst2BI	CACGAG	1 cut(s)	1860
Bst2UI	CCWGG	6 cut(s)	100, 107, 285, 1021, 1521, 1754
Bst4CI	ACNGT	8 cut(s)	74, 343, 1253, 1305, 1483, 1973, 2050, 2092
Bst6I	CTCTTC	2 cut(s)	1521, 1653
BstAFI	CTTAAG	1 cut(s)	31
BstBAI	YACGTR	1 cut(s)	751
BstC8I	GCNNGC	6 cut(s)	945, 980, 1320, 2022, 2242, 2308
BstDSI	CCRYGG	2 cut(s)	1645, 2095
BstENI	CCTNNNNNAGG	1 cut(s)	110
BstF5I	GGATG	4 cut(s)	461, 577, 1195, 2155
BstFNI	CGCG	4 cut(s)	27, 48, 945, 2352
BstHHI	GCGC	6 cut(s)	29, 48, 945, 947, 1318, 2352
BstMAI	GTCTC	7 cut(s)	668, 806, 864, 1169, 1584, 1624, 2348
BstMCI	CGRYCG	1 cut(s)	1714
BstMWI	GCNNNNNNNGC	7 cut(s)	33, 236, 1190, 1707, 2021, 2180, 2347
BstNI	CCWGG	6 cut(s)	100, 107, 285, 1021, 1521, 1754
BstNSI	RCATGY	1 cut(s)	1053
BstSCI	CCNGG	7 cut(s)	98, 105, 283, 1019, 1519, 1582, 1752
BstSFI	CTRYAG	3 cut(s)	128, 741, 1194
BstUI	CGCG	4 cut(s)	27, 48, 945, 2352
BstV1I	GCAGC	6 cut(s)	142, 202, 421, 1180, 2155, 2158
BstX2I	RGATCY	4 cut(s)	535, 1810, 2209, 2277
BstXI	CCANNNNNNTGG	1 cut(s)	106
BstYI	RGATCY	4 cut(s)	535, 1810, 2209, 2277
Bsu15I	ATCGAT	5 cut(s)	147, 648, 799, 1714, 2145
Bsu36I	CCTNAGG	2 cut(s)	38, 1032
BsuI	GTATCC	4 cut(s)	594, 622, 863, 1471
BsuRI	GGCC	8 cut(s)	263, 576, 915, 1165, 2073, 2103, 2183, 2244
BsuTUI	ATCGAT	5 cut(s)	147, 648, 799, 1714, 2145
BtgI	CCRYGG	2 cut(s)	1645, 2095
BtsCI	GGATG	4 cut(s)	461, 577, 1195, 2155
BtsIMutI	CAGTG	3 cut(s)	906, 1258, 1310
BveI	ACCTGC	1 cut(s)	1187
Cac8I	GCNNGC	6 cut(s)	945, 980, 1320, 2022, 2242, 2308
CaiI	CAGNNNCTG	1 cut(s)	1063
CfoI	GCGC	6 cut(s)	29, 48, 945, 947, 1318, 2352
Cfr13I	GGNCC	3 cut(s)	203, 934, 2102
ClaI	ATCGAT	5 cut(s)	147, 648, 799, 1714, 2145
CseI	GACGC	2 cut(s)	37, 1856
CsiI	ACCWGGT	2 cut(s)	283, 1752
Csp6I	GTAC	8 cut(s)	103, 404, 560, 746, 1308, 1528, 1915, 2266
CviAII	CATG	8 cut(s)	866, 1050, 1420, 1541, 1646, 2096, 2123, 2271
CviQI	GTAC	8 cut(s)	103, 404, 560, 746, 1308, 1528, 1915, 2266
DraI	TTTAAA	1 cut(s)	364
DriI	GACNNNNNGTC	1 cut(s)	287
EaeI	YGGCCR	2 cut(s)	913, 2181
Eam1104I	CTCTTC	2 cut(s)	1521, 1653
Eam1105I	GACNNNNNGTC	1 cut(s)	287
EarI	CTCTTC	2 cut(s)	1521, 1653
Ecl136II	GAGCTC	1 cut(s)	412
Eco130I	CCWWGG	3 cut(s)	820, 1645, 2095
Eco147I	AGGCCT	1 cut(s)	2244
Eco24I	GRGCYC	1 cut(s)	414
Eco31I	GGTCTC	2 cut(s)	1169, 2348
Eco32I	GATATC	2 cut(s)	781, 1226
Eco47I	GGWCC	2 cut(s)	203, 934
Eco53kI	GAGCTC	1 cut(s)	412
Eco57I	CTGAAG	4 cut(s)	605, 770, 2408, 2439
Eco81I	CCTNAGG	2 cut(s)	38, 1032
Eco88I	CYCGRG	1 cut(s)	671
EcoICRI	GAGCTC	1 cut(s)	412
EcoNI	CCTNNNNNAGG	1 cut(s)	110
EcoRI	GAATTC	2 cut(s)	972, 1345
EcoRII	CCWGG	6 cut(s)	98, 105, 283, 1019, 1519, 1752
EcoRV	GATATC	2 cut(s)	781, 1226
EcoT14I	CCWWGG	3 cut(s)	820, 1645, 2095
EcoT22I	ATGCAT	2 cut(s)	768, 1899
EcoT38I	GRGCYC	1 cut(s)	414
ErhI	CCWWGG	3 cut(s)	820, 1645, 2095
FaeI	CATG	8 cut(s)	869, 1053, 1423, 1544, 1649, 2099, 2126, 2274
FalI	AAGNNNNNCTT	8 cut(s)	357, 389, 1093, 1125, 1116, 1148, 1993, 2025
FaqI	GGGAC	1 cut(s)	432
FatI	CATG	8 cut(s)	865, 1049, 1419, 1540, 1645, 2095, 2122, 2270
FauI	CCCGC	1 cut(s)	2299
FauNDI	CATATG	1 cut(s)	256
Fnu4HI	GCNGC	8 cut(s)	131, 134, 191, 435, 1194, 2071, 2169, 2172
FokI	GGATG	4 cut(s)	448, 564, 1202, 2142
FriOI	GRGCYC	1 cut(s)	414
Fsp4HI	GCNGC	8 cut(s)	131, 134, 191, 435, 1194, 2071, 2169, 2172
FspBI	CTAG	3 cut(s)	390, 1655, 2214
FspI	TGCGCA	1 cut(s)	1317
GlaI	GCGC	6 cut(s)	28, 47, 944, 946, 1317, 2351
GluI	GCNGC	8 cut(s)	131, 134, 191, 435, 1194, 2071, 2169, 2172
GsuI	CTGGAG	2 cut(s)	82, 2390
HaeIII	GGCC	8 cut(s)	263, 576, 915, 1165, 2073, 2103, 2183, 2244
HapII	CCGG	2 cut(s)	201, 1584
HgaI	GACGC	2 cut(s)	37, 1856
HhaI	GCGC	6 cut(s)	29, 48, 945, 947, 1318, 2352
Hin1II	CATG	8 cut(s)	869, 1053, 1423, 1544, 1649, 2099, 2126, 2274
Hin6I	GCGC	6 cut(s)	27, 46, 943, 945, 1316, 2350
HinP1I	GCGC	6 cut(s)	27, 46, 943, 945, 1316, 2350
HindIII	AAGCTT	4 cut(s)	617, 662, 2034, 2339
HinfI	GANTC	7 cut(s)	7, 386, 527, 1005, 1129, 1261, 2043
HpaII	CCGG	2 cut(s)	201, 1584
HphI	GGTGA	4 cut(s)	1211, 1435, 1768, 1985
Hpy166II	GTNNAC	6 cut(s)	21, 562, 748, 1308, 1401, 2268
Hpy188III	TCNNGA	9 cut(s)	794, 1077, 1229, 1676, 1860, 2159, 2323, 2369, 2417
Hpy8I	GTNNAC	6 cut(s)	21, 562, 748, 1308, 1401, 2268
Hpy99I	CGWCG	3 cut(s)	53, 176, 2364
HpyAV	CCTTC	4 cut(s)	794, 1468, 2084, 2158
HpyCH4III	ACNGT	8 cut(s)	74, 343, 1253, 1305, 1483, 1973, 2050, 2092
HpyCH4IV	ACGT	4 cut(s)	750, 2197, 2362, 2437
HpyF10VI	GCNNNNNNNGC	7 cut(s)	33, 236, 1190, 1707, 2021, 2180, 2347
HpySE526I	ACGT	4 cut(s)	750, 2197, 2362, 2437
Hsp92II	CATG	8 cut(s)	869, 1053, 1423, 1544, 1649, 2099, 2126, 2274
HspAI	GCGC	6 cut(s)	27, 46, 943, 945, 1316, 2350
KpnI	GGTACC	1 cut(s)	106
LmnI	GCTCC	3 cut(s)	43, 796, 1586
Lsp1109I	GCAGC	6 cut(s)	142, 202, 421, 1180, 2155, 2158
LweI	GCATC	7 cut(s)	753, 775, 1180, 1280, 1884, 2227, 2422
MabI	ACCWGGT	2 cut(s)	283, 1752
MaeI	CTAG	3 cut(s)	390, 1655, 2214
MaeII	ACGT	4 cut(s)	750, 2197, 2362, 2437
MaeIII	GTNAC	9 cut(s)	74, 392, 518, 1015, 1215, 1297, 1838, 1967, 1985
MflI	RGATCY	4 cut(s)	535, 1810, 2209, 2277
MhlI	GDGCHC	2 cut(s)	414, 1089
MlsI	TGGCCA	1 cut(s)	915
MluNI	TGGCCA	1 cut(s)	915
MlyI	GAGTC	2 cut(s)	395, 2037
MmeI	TCCRAC	3 cut(s)	90, 513, 2102
Mox20I	TGGCCA	1 cut(s)	915
Mph1103I	ATGCAT	2 cut(s)	768, 1899
MroXI	GAANNNNTTC	2 cut(s)	354, 972
MscI	TGGCCA	1 cut(s)	915
MseI	TTAA	8 cut(s)	32, 309, 363, 429, 843, 1100, 1548, 2440
MslI	CAYNNNNRTG	1 cut(s)	2051
Msp20I	TGGCCA	1 cut(s)	915
MspCI	CTTAAG	1 cut(s)	31
MspI	CCGG	2 cut(s)	201, 1584
MspR9I	CCNGG	7 cut(s)	100, 107, 285, 1021, 1521, 1584, 1754
MvaI	CCWGG	6 cut(s)	100, 107, 285, 1021, 1521, 1754
MvnI	CGCG	4 cut(s)	27, 48, 945, 2352
MwoI	GCNNNNNNNGC	7 cut(s)	33, 236, 1190, 1707, 2021, 2180, 2347
NciI	CCSGG	1 cut(s)	1584
NcoI	CCATGG	2 cut(s)	1645, 2095
NdeI	CATATG	1 cut(s)	256
NlaIII	CATG	8 cut(s)	869, 1053, 1423, 1544, 1649, 2099, 2126, 2274
NlaIV	GGNNCC	7 cut(s)	104, 537, 792, 1081, 1651, 1702, 2211
NmuCI	GTSAC	2 cut(s)	392, 1015
NsbI	TGCGCA	1 cut(s)	1317
NsiI	ATGCAT	2 cut(s)	768, 1899
NspI	RCATGY	1 cut(s)	1053
OliI	CACNNNNGTG	1 cut(s)	2051
PaqCI	CACCTGC	1 cut(s)	1187
PauI	GCGCGC	1 cut(s)	943
PceI	AGGCCT	1 cut(s)	2244
PcsI	WCGNNNNNNNCGW	3 cut(s)	144, 153, 451
PdmI	GAANNNNTTC	2 cut(s)	354, 972
PfeI	GAWTC	5 cut(s)	7, 527, 1005, 1129, 1261
PflFI	GACNNNGTC	1 cut(s)	161
PflMI	CCANNNNNTGG	1 cut(s)	284
PfoI	TCCNGGA	1 cut(s)	1582
PkrI	GCNGC	8 cut(s)	132, 135, 192, 436, 1195, 2072, 2170, 2173
Ple19I	CGATCG	1 cut(s)	1714
PleI	GAGTC	2 cut(s)	394, 2037
PpsI	GAGTC	2 cut(s)	394, 2037
Ppu21I	YACGTR	1 cut(s)	751
PshBI	ATTAAT	1 cut(s)	1548
PsiI	TTATAA	1 cut(s)	1287
Psp124BI	GAGCTC	1 cut(s)	414
Psp1406I	AACGTT	1 cut(s)	2197
Psp6I	CCWGG	6 cut(s)	98, 105, 283, 1019, 1519, 1752
PspGI	CCWGG	6 cut(s)	98, 105, 283, 1019, 1519, 1752
PspN4I	GGNNCC	7 cut(s)	104, 537, 792, 1081, 1651, 1702, 2211
PspPI	GGNCC	3 cut(s)	203, 934, 2102
PsrI	GAACNNNNNNTAC	2 cut(s)	1462, 1494
PstI	CTGCAG	3 cut(s)	132, 745, 1198
PstNI	CAGNNNCTG	1 cut(s)	1063
PsuI	RGATCY	4 cut(s)	535, 1810, 2209, 2277
PsyI	GACNNNGTC	1 cut(s)	161
PteI	GCGCGC	1 cut(s)	943
PvuI	CGATCG	1 cut(s)	1714
RsaI	GTAC	8 cut(s)	104, 405, 561, 747, 1309, 1529, 1916, 2267
RsaNI	GTAC	8 cut(s)	103, 404, 560, 746, 1308, 1528, 1915, 2266
RseI	CAYNNNNRTG	1 cut(s)	2051
SacI	GAGCTC	1 cut(s)	414
SaqAI	TTAA	8 cut(s)	32, 309, 363, 429, 843, 1100, 1548, 2440
SatI	GCNGC	8 cut(s)	131, 134, 191, 435, 1194, 2071, 2169, 2172
Sau96I	GGNCC	3 cut(s)	203, 934, 2102
SchI	GAGTC	2 cut(s)	395, 2037
ScrFI	CCNGG	7 cut(s)	100, 107, 285, 1021, 1521, 1584, 1754
SduI	GDGCHC	2 cut(s)	414, 1089
SexAI	ACCWGGT	2 cut(s)	283, 1752
SfaNI	GCATC	7 cut(s)	753, 775, 1180, 1280, 1884, 2227, 2422
SfcI	CTRYAG	3 cut(s)	128, 741, 1194
SinI	GGWCC	2 cut(s)	203, 934
SmiMI	CAYNNNNRTG	1 cut(s)	2051
SmlI	CTYRAG	3 cut(s)	31, 407, 1147
SmoI	CTYRAG	3 cut(s)	31, 407, 1147
SseBI	AGGCCT	1 cut(s)	2244
SsiI	CCGC	6 cut(s)	134, 228, 493, 2070, 2108, 2306
SspI	AATATT	2 cut(s)	698, 1731
SspMI	CTAG	3 cut(s)	390, 1655, 2214
SstI	GAGCTC	1 cut(s)	414
StuI	AGGCCT	1 cut(s)	2244
StyD4I	CCNGG	7 cut(s)	98, 105, 283, 1019, 1519, 1582, 1752
StyI	CCWWGG	3 cut(s)	820, 1645, 2095
TaaI	ACNGT	8 cut(s)	74, 343, 1253, 1305, 1483, 1973, 2050, 2092
TaiI	ACGT	4 cut(s)	753, 2200, 2365, 2440
TatI	WGTACW	6 cut(s)	403, 559, 745, 1307, 1914, 2265
TauI	GCSGC	2 cut(s)	136, 2073
TfiI	GAWTC	5 cut(s)	7, 527, 1005, 1129, 1261
Tru1I	TTAA	8 cut(s)	32, 309, 363, 429, 843, 1100, 1548, 2440
Tru9I	TTAA	8 cut(s)	32, 309, 363, 429, 843, 1100, 1548, 2440
TscAI	CASTG	3 cut(s)	913, 1258, 1310
TseFI	GTSAC	2 cut(s)	392, 1015
TseI	GCWGC	6 cut(s)	130, 190, 434, 1193, 2168, 2171
Tsp45I	GTSAC	2 cut(s)	392, 1015
TspDTI	ATGAA	9 cut(s)	192, 1426, 1436, 1529, 1682, 1935, 2046, 2129, 2274
TspGWI	ACGGA	2 cut(s)	506, 2384
TspRI	CASTG	3 cut(s)	913, 1258, 1310
Tth111I	GACNNNGTC	1 cut(s)	161
Van91I	CCANNNNNTGG	1 cut(s)	284
Vha464I	CTTAAG	1 cut(s)	31
VpaK11BI	GGWCC	2 cut(s)	203, 934
VspI	ATTAAT	1 cut(s)	1548
XagI	CCTNNNNNAGG	1 cut(s)	110
XapI	RAATTY	4 cut(s)	972, 1345, 1367, 2253
XceI	RCATGY	1 cut(s)	1053
XmnI	GAANNNNTTC	2 cut(s)	354, 972
XspI	CTAG	3 cut(s)	390, 1655, 2214
Zsp2I	ATGCAT	2 cut(s)	768, 1899

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.