pycom11g27230

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0007402
Physical Location & Seq
Forward (+)
29562042 .. 29564547
2506 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1038 bp
ATGTTGTCCTCTTCTTCCTTTATATATGTGTTCTTCAAGCGCGTAGACCCGGTCGACAGGGAGGAGAGAGAGGAGAGGGAGAGAAACCGTTACACATCCTATGTACACAGACATCATTCTGCAAGACATACCAGGAGTACATGCAAGGCCAGAAGAAGAAGCAGCCCGGGGTTGGATTCAAGAAGCTTAAGAACGATCTTGAAGAAATGCCGCAGAGAAGATTTCCATGACGTCCGTACTTGCCCCGACCATTGCCCAGTGTGTGATGGGAGCTTTTTCCCGGCCCTTCTCGATGAGATGTCTGCTGTGGTGGGTTTCTTTCATAAGCGTGCACAGAAATTGCTTGAACTCCATCTTGCTTCTGGCTTTCGTAAGTACATGTTTTGGGTCAAAGGTAAACGTCGAGGGGGCCATGGTGCCTTAATAGAAGAAGGCAAGGACCTCGTTACTTATGCTCTGATCAACGCCATTGCCATTCGGAAAATACTAAAGAAATATGATAAGGCCTTTAAGTCGCAAGCTCAAAGTATGCACATTGGACTCCTTCAGAGCCCATGGCTTTTTGAGCTTATGGCTTTTCACATCAATTTAAGGGAAACCAATACTAAGTCGAGGAAGGCACCGGCTTTGTTTGAGGGATGCTCCCTCAAGATTAATGATGAGAAACCATCTCTCGCCTGTGAGCTCTTTGATTCCGTTAAGCTTGATATTGATTTGACTTGTTCTATATGCTTGGACACGGTTTTTGATCCAGTTGCTCTTACATGCGGTCATATATTCTGCCACATGTGTGCTTGCTCGGCTGCATCAGTGACTATTGTCGATGGATTAAAGTCTGCAGAACCTAAAGAAAAATGCCCTCTATGCCGAGAGGCAAGAGTTTTTGAAGGCGCTGTACATTTAGAAGAGCTTAGTATGTTACTTAGCCGAAACTGCCGTGAATACTGGGAGCAGAGACTCCAGACCGAGAGGGTAGAGAGGGTTCGGCAAGCAAAGCAGCACTGGGAATCCCAGTGCCGGGCATTCATTGGCCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006082 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009057 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009626 GO:0009627 GO:0009696 GO:0009697 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009987 GO:0010033 GO:0010035 GO:0010167 GO:0010337 GO:0010498 GO:0010565 GO:0010817 GO:0012501 GO:0014070 GO:0016020 GO:0016053 GO:0016567 GO:0016740 GO:0016999 GO:0017000 GO:0017144 GO:0018958 GO:0019222 GO:0019438 GO:0019538 GO:0019752 GO:0019787 GO:0019941 GO:0030163 GO:0031323 GO:0032350 GO:0032446 GO:0032787 GO:0033554 GO:0034050 GO:0036211 GO:0042221 GO:0042445 GO:0042446 GO:0042493 GO:0042537 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0045087 GO:0046189 GO:0046394 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061630 GO:0061659 GO:0062012 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0071944 GO:0072330 GO:0080021 GO:0098542 GO:0140096 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901615 GO:1901617 GO:1901698 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX

Protein Analysis

346

Amino Acids

39.79

Weight (kDa)

9.1

Isoelectric Point (pI)

61.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RING_XB3-XBAT31 PF24921 240 - 292 4.8e-07 E3 ubiquitin-protein ligase XB3/XBAT31 RING finger
zf-C3HC4 PF00097 241 - 289 1.2e-06 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 241 - 270 4.5e-06 RING-type zinc-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 234
AccB1I GGYRCC 2 cut(s) 416, 619
AccI GTMKAC 2 cut(s) 45, 54
AccII CGCG 1 cut(s) 42
AciI CCGC 2 cut(s) 211, 768
AclWI GGATC 1 cut(s) 743
AcuI CTGAAG 1 cut(s) 530
AcyI GRCGYC 1 cut(s) 231
AfaI GTAC 5 cut(s) 105, 139, 238, 377, 897
AfiI CCNNNNNNNGG 3 cut(s) 172, 1017, 1018
AflII CTTAAG 1 cut(s) 187
AflIII ACRYGT 2 cut(s) 378, 786
AgsI TTSAA 5 cut(s) 37, 180, 202, 347, 887
AjnI CCWGG 1 cut(s) 131
AleI CACNNNNGTG 1 cut(s) 789
AluBI AGCT 7 cut(s) 186, 273, 521, 568, 685, 703, 910
AluI AGCT 7 cut(s) 186, 273, 521, 568, 685, 703, 910
Alw21I GWGCWC 2 cut(s) 334, 687
Alw26I GTCTC 1 cut(s) 949
Alw44I GTGCAC 1 cut(s) 330
AlwI GGATC 1 cut(s) 743
Ama87I CYCGRG 1 cut(s) 166
AoxI GGCC 5 cut(s) 147, 282, 409, 504, 1030
ApaLI GTGCAC 1 cut(s) 330
ApeKI GCWGC 3 cut(s) 162, 803, 997
ArsI GACNNNNNNTTYG 2 cut(s) 728, 760
AseI ATTAAT 1 cut(s) 654
AspLEI GCGC 2 cut(s) 42, 893
AspS9I GGNCC 4 cut(s) 283, 409, 439, 1031
AsuC2I CCSGG 5 cut(s) 50, 167, 168, 281, 1019
AvaI CYCGRG 1 cut(s) 166
AvaII GGWCC 1 cut(s) 439
BaeGI GKGCMC 1 cut(s) 334
BanI GGYRCC 2 cut(s) 416, 619
BanII GRGCYC 2 cut(s) 554, 687
BarI GAAGNNNNNNTAC 2 cut(s) 879, 911
Bbv12I GWGCWC 2 cut(s) 334, 687
BbvI GCAGC 3 cut(s) 174, 790, 1009
BccI CCATC 4 cut(s) 260, 360, 676, 818
BceAI ACGGC 1 cut(s) 921
BcgI CGANNNNNNTGC 2 cut(s) 424, 458
BciT130I CCWGG 1 cut(s) 133
BclI TGATCA 1 cut(s) 459
BcnI CCSGG 5 cut(s) 50, 167, 168, 281, 1019
BcoDI GTCTC 1 cut(s) 949
BfmI CTRYAG 1 cut(s) 837
BfoI RGCGCY 1 cut(s) 894
BfrI CTTAAG 1 cut(s) 187
BisI GCNGC 4 cut(s) 163, 211, 804, 998
BlsI GCNGC 4 cut(s) 164, 212, 805, 999
Bme1390I CCNGG 6 cut(s) 50, 133, 167, 168, 281, 1019
Bme18I GGWCC 1 cut(s) 439
BmeT110I CYCGRG 1 cut(s) 166
BmgT120I GGNCC 4 cut(s) 283, 409, 439, 1031
BmiI GGNNCC 3 cut(s) 410, 418, 621
BmrFI CCNGG 6 cut(s) 50, 133, 167, 168, 281, 1019
BmrI ACTGGG 4 cut(s) 251, 955, 1006, 1012
BmsI GCATC 2 cut(s) 629, 815
BmuI ACTGGG 4 cut(s) 251, 955, 1006, 1012
BoxI GACNNNNGTC 1 cut(s) 818
BplI GAGNNNNNCTC 2 cut(s) 626, 658
BpmI CTGGAG 1 cut(s) 944
BpuEI CTTGAG 1 cut(s) 632
BpuMI CCSGG 5 cut(s) 50, 167, 168, 281, 1019
BsaHI GRCGYC 1 cut(s) 231
BsaJI CCNNGG 4 cut(s) 166, 167, 412, 554
Bsc4I CCNNNNNNNGG 3 cut(s) 172, 1017, 1018
Bse118I RCCGGY 1 cut(s) 622
Bse1I ACTGG 5 cut(s) 257, 752, 950, 1007, 1012
Bse3DI GCAATG 2 cut(s) 250, 468
BseBI CCWGG 1 cut(s) 133
BseDI CCNNGG 4 cut(s) 166, 167, 412, 554
BseGI GGATG 2 cut(s) 95, 644
BseLI CCNNNNNNNGG 3 cut(s) 172, 1017, 1018
BseMI GCAATG 2 cut(s) 250, 468
BseNI ACTGG 5 cut(s) 257, 752, 950, 1007, 1012
BseRI GAGGAG 2 cut(s) 77, 86
BseSI GKGCMC 1 cut(s) 334
BseXI GCAGC 3 cut(s) 174, 790, 1009
Bsh1236I CGCG 1 cut(s) 42
Bsh1285I CGRYCG 1 cut(s) 54
BshFI GGCC 5 cut(s) 149, 284, 411, 506, 1032
BshNI GGYRCC 2 cut(s) 416, 619
BsiEI CGRYCG 1 cut(s) 54
BsiHKAI GWGCWC 2 cut(s) 334, 687
BsiHKCI CYCGRG 1 cut(s) 166
BsiSI CCGG 5 cut(s) 50, 167, 281, 623, 1018
BslI CCNNNNNNNGG 3 cut(s) 172, 1017, 1018
BsmAI GTCTC 1 cut(s) 949
BsmI GAATGC 1 cut(s) 1022
BsnI GGCC 5 cut(s) 149, 284, 411, 506, 1032
BsoBI CYCGRG 1 cut(s) 166
Bsp1286I GDGCHC 3 cut(s) 334, 554, 687
Bsp1407I TGTACA 2 cut(s) 103, 895
Bsp143I GATC 3 cut(s) 195, 459, 748
Bsp19I CCATGG 2 cut(s) 412, 554
BspACI CCGC 2 cut(s) 211, 768
BspANI GGCC 5 cut(s) 149, 284, 411, 506, 1032
BspFNI CGCG 1 cut(s) 42
BspLI GGNNCC 3 cut(s) 410, 418, 621
BspMAI CTGCAG 1 cut(s) 841
BspPI GGATC 1 cut(s) 743
BspQI GCTCTTC 1 cut(s) 900
BspT107I GGYRCC 2 cut(s) 416, 619
BspTI CTTAAG 1 cut(s) 187
BsrDI GCAATG 2 cut(s) 250, 468
BsrFI RCCGGY 1 cut(s) 622
BsrGI TGTACA 2 cut(s) 103, 895
BsrI ACTGG 5 cut(s) 257, 752, 950, 1007, 1012
BssAI RCCGGY 1 cut(s) 622
BssECI CCNNGG 4 cut(s) 166, 167, 412, 554
BssMI GATC 3 cut(s) 195, 459, 748
BssNI GRCGYC 1 cut(s) 231
BssT1I CCWWGG 2 cut(s) 412, 554
Bst2UI CCWGG 1 cut(s) 133
Bst4CI ACNGT 2 cut(s) 89, 742
Bst6I CTCTTC 2 cut(s) 16, 900
BstACI GRCGYC 1 cut(s) 231
BstAFI CTTAAG 1 cut(s) 187
BstAUI TGTACA 2 cut(s) 103, 895
BstC8I GCNNGC 4 cut(s) 330, 519, 796, 990
BstDEI CTNAG 4 cut(s) 606, 911, 923, 1035
BstDSI CCRYGG 2 cut(s) 412, 554
BstF5I GGATG 2 cut(s) 95, 644
BstFNI CGCG 1 cut(s) 42
BstH2I RGCGCY 1 cut(s) 894
BstHHI GCGC 2 cut(s) 42, 893
BstKTI GATC 3 cut(s) 198, 462, 751
BstMAI GTCTC 1 cut(s) 949
BstMBI GATC 3 cut(s) 195, 459, 748
BstMCI CGRYCG 1 cut(s) 54
BstMWI GCNNNNNNNGC 5 cut(s) 565, 800, 864, 933, 994
BstNI CCWGG 1 cut(s) 133
BstNSI RCATGY 4 cut(s) 144, 382, 768, 790
BstPAI GACNNNNGTC 1 cut(s) 818
BstSCI CCNGG 6 cut(s) 48, 131, 165, 166, 279, 1017
BstSFI CTRYAG 1 cut(s) 837
BstSLI GKGCMC 1 cut(s) 334
BstUI CGCG 1 cut(s) 42
BstV1I GCAGC 3 cut(s) 174, 790, 1009
BsuRI GGCC 5 cut(s) 149, 284, 411, 506, 1032
BtgI CCRYGG 2 cut(s) 412, 554
BtsCI GGATG 2 cut(s) 95, 644
BtsIMutI CAGTG 4 cut(s) 264, 816, 1000, 1019
Cac8I GCNNGC 4 cut(s) 330, 519, 796, 990
CfoI GCGC 2 cut(s) 42, 893
Cfr10I RCCGGY 1 cut(s) 622
Cfr13I GGNCC 4 cut(s) 283, 409, 439, 1031
Cfr9I CCCGGG 1 cut(s) 166
Csp6I GTAC 5 cut(s) 104, 138, 237, 376, 896
CviAII CATG 7 cut(s) 141, 227, 379, 413, 555, 765, 787
CviQI GTAC 5 cut(s) 104, 138, 237, 376, 896
DdeI CTNAG 4 cut(s) 606, 911, 923, 1035
DpnI GATC 3 cut(s) 197, 461, 750
DpnII GATC 3 cut(s) 195, 459, 748
Eam1104I CTCTTC 2 cut(s) 16, 900
EarI CTCTTC 2 cut(s) 16, 900
Ecl136II GAGCTC 1 cut(s) 685
Eco130I CCWWGG 2 cut(s) 412, 554
Eco147I AGGCCT 1 cut(s) 506
Eco24I GRGCYC 2 cut(s) 554, 687
Eco47I GGWCC 1 cut(s) 439
Eco53kI GAGCTC 1 cut(s) 685
Eco57I CTGAAG 1 cut(s) 530
Eco88I CYCGRG 1 cut(s) 166
EcoICRI GAGCTC 1 cut(s) 685
EcoO109I RGGNCCY 1 cut(s) 439
EcoRII CCWGG 1 cut(s) 131
EcoT14I CCWWGG 2 cut(s) 412, 554
EcoT38I GRGCYC 2 cut(s) 554, 687
ErhI CCWWGG 2 cut(s) 412, 554
FaeI CATG 7 cut(s) 144, 230, 382, 416, 558, 768, 790
FatI CATG 7 cut(s) 140, 226, 378, 412, 554, 764, 786
FbaI TGATCA 1 cut(s) 459
FblI GTMKAC 2 cut(s) 45, 54
Fnu4HI GCNGC 4 cut(s) 163, 211, 804, 998
FokI GGATG 2 cut(s) 82, 651
FriOI GRGCYC 2 cut(s) 554, 687
Fsp4HI GCNGC 4 cut(s) 163, 211, 804, 998
GlaI GCGC 2 cut(s) 41, 892
GluI GCNGC 4 cut(s) 163, 211, 804, 998
GsuI CTGGAG 1 cut(s) 944
HaeII RGCGCY 1 cut(s) 894
HaeIII GGCC 5 cut(s) 149, 284, 411, 506, 1032
HapII CCGG 5 cut(s) 50, 167, 281, 623, 1018
HhaI GCGC 2 cut(s) 42, 893
Hin1I GRCGYC 1 cut(s) 231
Hin1II CATG 7 cut(s) 144, 230, 382, 416, 558, 768, 790
Hin6I GCGC 2 cut(s) 40, 891
HinP1I GCGC 2 cut(s) 40, 891
HincII GTYRAC 1 cut(s) 55
HindII GTYRAC 1 cut(s) 55
HindIII AAGCTT 2 cut(s) 184, 701
HinfI GANTC 5 cut(s) 176, 540, 692, 957, 1007
HpaII CCGG 5 cut(s) 50, 167, 281, 623, 1018
Hpy166II GTNNAC 5 cut(s) 46, 55, 106, 332, 398
Hpy188I TCNGA 3 cut(s) 459, 480, 549
Hpy188III TCNNGA 5 cut(s) 180, 199, 290, 649, 961
Hpy8I GTNNAC 5 cut(s) 46, 55, 106, 332, 398
Hpy99I CGWCG 1 cut(s) 405
HpyAV CCTTC 5 cut(s) 296, 425, 554, 610, 881
HpyCH4III ACNGT 2 cut(s) 89, 742
HpyCH4IV ACGT 2 cut(s) 231, 400
HpyCH4V TGCA 6 cut(s) 122, 144, 332, 532, 806, 839
HpyF10VI GCNNNNNNNGC 5 cut(s) 565, 800, 864, 933, 994
HpyF3I CTNAG 4 cut(s) 606, 911, 923, 1035
HpySE526I ACGT 2 cut(s) 231, 400
Hsp92I GRCGYC 1 cut(s) 231
Hsp92II CATG 7 cut(s) 144, 230, 382, 416, 558, 768, 790
HspAI GCGC 2 cut(s) 40, 891
Ksp22I TGATCA 1 cut(s) 459
Kzo9I GATC 3 cut(s) 195, 459, 748
LguI GCTCTTC 1 cut(s) 900
LmnI GCTCC 3 cut(s) 270, 647, 949
Lsp1109I GCAGC 3 cut(s) 174, 790, 1009
LweI GCATC 2 cut(s) 629, 815
MaeII ACGT 2 cut(s) 231, 400
MaeIII GTNAC 4 cut(s) 89, 445, 811, 918
MalI GATC 3 cut(s) 197, 461, 750
MboI GATC 3 cut(s) 195, 459, 748
MboII GAAGA 9 cut(s) 3, 6, 25, 165, 168, 214, 230, 440, 917
MhlI GDGCHC 3 cut(s) 334, 554, 687
MluCI AATT 2 cut(s) 338, 586
MlyI GAGTC 2 cut(s) 534, 951
MmeI TCCRAC 1 cut(s) 153
MseI TTAA 7 cut(s) 188, 422, 510, 590, 654, 699, 830
MslI CAYNNNNRTG 2 cut(s) 327, 789
MspCI CTTAAG 1 cut(s) 187
MspI CCGG 5 cut(s) 50, 167, 281, 623, 1018
MspR9I CCNGG 6 cut(s) 50, 133, 167, 168, 281, 1019
Mva1269I GAATGC 1 cut(s) 1022
MvaI CCWGG 1 cut(s) 133
MvnI CGCG 1 cut(s) 42
MwoI GCNNNNNNNGC 5 cut(s) 565, 800, 864, 933, 994
NciI CCSGG 5 cut(s) 50, 167, 168, 281, 1019
NcoI CCATGG 2 cut(s) 412, 554
NdeII GATC 3 cut(s) 195, 459, 748
NlaIII CATG 7 cut(s) 144, 230, 382, 416, 558, 768, 790
NlaIV GGNNCC 3 cut(s) 410, 418, 621
NmeAIII GCCGAG 2 cut(s) 779, 893
NmuCI GTSAC 1 cut(s) 811
NspI RCATGY 4 cut(s) 144, 382, 768, 790
OliI CACNNNNGTG 1 cut(s) 789
PceI AGGCCT 1 cut(s) 506
PciI ACATGT 2 cut(s) 378, 786
PciSI GCTCTTC 1 cut(s) 900
PctI GAATGC 1 cut(s) 1022
PfeI GAWTC 3 cut(s) 176, 692, 1007
PflFI GACNNNGTC 1 cut(s) 50
PkrI GCNGC 4 cut(s) 164, 212, 805, 999
PleI GAGTC 2 cut(s) 534, 951
PpsI GAGTC 2 cut(s) 534, 951
PpuMI RGGWCCY 1 cut(s) 439
PscI ACATGT 2 cut(s) 378, 786
PshAI GACNNNNGTC 1 cut(s) 818
PshBI ATTAAT 1 cut(s) 654
Psp124BI GAGCTC 1 cut(s) 687
Psp5II RGGWCCY 1 cut(s) 439
Psp6I CCWGG 1 cut(s) 131
PspGI CCWGG 1 cut(s) 131
PspN4I GGNNCC 3 cut(s) 410, 418, 621
PspPI GGNCC 4 cut(s) 283, 409, 439, 1031
PspPPI RGGWCCY 1 cut(s) 439
PsrI GAACNNNNNNTAC 2 cut(s) 966, 998
PstI CTGCAG 1 cut(s) 841
PsyI GACNNNGTC 1 cut(s) 50
RsaI GTAC 5 cut(s) 105, 139, 238, 377, 897
RsaNI GTAC 5 cut(s) 104, 138, 237, 376, 896
RseI CAYNNNNRTG 2 cut(s) 327, 789
SacI GAGCTC 1 cut(s) 687
SalI GTCGAC 1 cut(s) 53
SapI GCTCTTC 1 cut(s) 900
SaqAI TTAA 7 cut(s) 188, 422, 510, 590, 654, 699, 830
SatI GCNGC 4 cut(s) 163, 211, 804, 998
Sau3AI GATC 3 cut(s) 195, 459, 748
Sau96I GGNCC 4 cut(s) 283, 409, 439, 1031
SchI GAGTC 2 cut(s) 534, 951
ScrFI CCNGG 6 cut(s) 50, 133, 167, 168, 281, 1019
SduI GDGCHC 3 cut(s) 334, 554, 687
SfaNI GCATC 2 cut(s) 629, 815
SfcI CTRYAG 1 cut(s) 837
SinI GGWCC 1 cut(s) 439
SmaI CCCGGG 1 cut(s) 168
SmiMI CAYNNNNRTG 2 cut(s) 327, 789
SmlI CTYRAG 2 cut(s) 187, 647
SmoI CTYRAG 2 cut(s) 187, 647
Sse9I AATT 2 cut(s) 338, 586
SseBI AGGCCT 1 cut(s) 506
SsiI CCGC 2 cut(s) 211, 768
SstI GAGCTC 1 cut(s) 687
StuI AGGCCT 1 cut(s) 506
StyD4I CCNGG 6 cut(s) 48, 131, 165, 166, 279, 1017
StyI CCWWGG 2 cut(s) 412, 554
TaaI ACNGT 2 cut(s) 89, 742
TaiI ACGT 2 cut(s) 234, 403
TaqI TCGA 5 cut(s) 54, 291, 403, 611, 822
TaqII GACCGA 1 cut(s) 980
TasI AATT 2 cut(s) 338, 586
TatI WGTACW 4 cut(s) 103, 137, 375, 895
TauI GCSGC 1 cut(s) 213
TfiI GAWTC 3 cut(s) 176, 692, 1007
Tru1I TTAA 7 cut(s) 188, 422, 510, 590, 654, 699, 830
Tru9I TTAA 7 cut(s) 188, 422, 510, 590, 654, 699, 830
TscAI CASTG 4 cut(s) 264, 816, 1007, 1019
TseFI GTSAC 1 cut(s) 811
TseI GCWGC 3 cut(s) 162, 803, 997
Tsp45I GTSAC 1 cut(s) 811
TspDTI ATGAA 2 cut(s) 311, 1015
TspGWI ACGGA 2 cut(s) 224, 685
TspMI CCCGGG 1 cut(s) 166
TspRI CASTG 4 cut(s) 264, 816, 1007, 1019
Tth111I GACNNNGTC 1 cut(s) 50
Vha464I CTTAAG 1 cut(s) 187
VneI GTGCAC 1 cut(s) 330
VpaK11BI GGWCC 1 cut(s) 439
VspI ATTAAT 1 cut(s) 654
XceI RCATGY 4 cut(s) 144, 382, 768, 790
XcmI CCANNNNNNNNNTGG 1 cut(s) 359
XmaI CCCGGG 1 cut(s) 166
XmiI GTMKAC 2 cut(s) 45, 54
ZraI GACGTC 1 cut(s) 232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.