Pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15480 AT1G80270 AT1G80270 AT1G80270 AT1G80270 AT1G80270 |
| fragaria_vesca | FvH4_6g25350 |
| malus_domestica | MD12G1096000.v1.1 MD14G1090300.v1.1 |
| prunus_persica | Prupe.7G034000_v2.0.a1 Prupe.7G034000_v2.0.a1 |
| pyrus_communis | pycom12g08300 pycom14g08090 |
| rosa_chinensis | RchiOBHm_Chr2g0125771 |
| rosa_laevigata | RLG00000018879 |
| rosa_multiflora | Rmu_sc0005557.1_g000002 Rmu_sc0026259.1_g000001 Rmu_sc0026260.1_g000001 Rmu_ssc0000055.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00117730 |
| rosa_rugosa | Rorug02G0259300 |
| rosa_samantha | Rh2AG317300 Rh2BG325300 Rh2CG307100 Rh2DG343300 |
| rosa_wichuraiana | Rw2G025670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1861 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1766 |
| AciI | CCGC | 2 cut(s) | 13, 1128 |
| AclWI | GGATC | 1 cut(s) | 434 |
| AcsI | RAATTY | 2 cut(s) | 668, 866 |
| AcuI | CTGAAG | 1 cut(s) | 399 |
| AcyI | GRCGYC | 1 cut(s) | 607 |
| AfaI | GTAC | 3 cut(s) | 717, 785, 803 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 730, 1110, 1128, 1766 |
| AflIII | ACRYGT | 1 cut(s) | 185 |
| AjnI | CCWGG | 1 cut(s) | 508 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1716, 1748 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 263, 295 |
| AluBI | AGCT | 9 cut(s) | 88, 236, 415, 503, 634, 941, 1179, 1316, 1763 |
| AluI | AGCT | 9 cut(s) | 88, 236, 415, 503, 634, 941, 1179, 1316, 1763 |
| Alw21I | GWGCWC | 1 cut(s) | 532 |
| Alw26I | GTCTC | 7 cut(s) | 163, 422, 428, 701, 814, 1049, 1681 |
| AlwI | GGATC | 1 cut(s) | 434 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 431 |
| Ama87I | CYCGRG | 1 cut(s) | 746 |
| AoxI | GGCC | 6 cut(s) | 492, 585, 721, 1015, 1496, 1737 |
| ApeKI | GCWGC | 2 cut(s) | 219, 1304 |
| ApoI | RAATTY | 2 cut(s) | 668, 866 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1004, 1036 |
| AseI | ATTAAT | 1 cut(s) | 356 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 315 |
| AspS9I | GGNCC | 2 cut(s) | 586, 1496 |
| AsuC2I | CCSGG | 1 cut(s) | 872 |
| AsuHPI | GGTGA | 2 cut(s) | 785, 1700 |
| AvaI | CYCGRG | 1 cut(s) | 746 |
| BanII | GRGCYC | 1 cut(s) | 10 |
| BauI | CACGAG | 1 cut(s) | 63 |
| BbsI | GAAGAC | 1 cut(s) | 1859 |
| Bbv12I | GWGCWC | 1 cut(s) | 532 |
| BbvI | GCAGC | 2 cut(s) | 231, 1291 |
| BccI | CCATC | 3 cut(s) | 269, 307, 503 |
| BciT130I | CCWGG | 1 cut(s) | 510 |
| BcnI | CCSGG | 1 cut(s) | 872 |
| BcoDI | GTCTC | 7 cut(s) | 163, 422, 428, 701, 814, 1049, 1681 |
| BfaI | CTAG | 4 cut(s) | 303, 863, 1110, 1442 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1106 |
| BglII | AGATCT | 1 cut(s) | 1456 |
| BisI | GCNGC | 2 cut(s) | 220, 1305 |
| BlsI | GCNGC | 2 cut(s) | 221, 1306 |
| Bme1390I | CCNGG | 2 cut(s) | 510, 872 |
| BmeT110I | CYCGRG | 1 cut(s) | 746 |
| BmgT120I | GGNCC | 2 cut(s) | 586, 1496 |
| BmiI | GGNNCC | 2 cut(s) | 38, 1758 |
| BmrFI | CCNGG | 2 cut(s) | 510, 872 |
| BmsI | GCATC | 1 cut(s) | 1501 |
| BpiI | GAAGAC | 1 cut(s) | 1859 |
| BpmI | CTGGAG | 2 cut(s) | 437, 1743 |
| BpuMI | CCSGG | 1 cut(s) | 872 |
| BsaAI | YACGTR | 1 cut(s) | 719 |
| BsaHI | GRCGYC | 1 cut(s) | 607 |
| BsaI | GGTCTC | 1 cut(s) | 428 |
| BsaJI | CCNNGG | 5 cut(s) | 207, 508, 1104, 1146, 1752 |
| BsaWI | WCCGGW | 1 cut(s) | 567 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 708, 738 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 730, 1110, 1128, 1766 |
| Bse1I | ACTGG | 5 cut(s) | 895, 1018, 1039, 1129, 1824 |
| Bse3DI | GCAATG | 1 cut(s) | 256 |
| BseBI | CCWGG | 1 cut(s) | 510 |
| BseDI | CCNNGG | 5 cut(s) | 207, 508, 1104, 1146, 1752 |
| BseGI | GGATG | 5 cut(s) | 118, 1516, 1653, 1689, 1788 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 730, 1110, 1128, 1766 |
| BseMI | GCAATG | 1 cut(s) | 256 |
| BseMII | CTCAG | 4 cut(s) | 46, 423, 1218, 1677 |
| BseNI | ACTGG | 5 cut(s) | 895, 1018, 1039, 1129, 1824 |
| BseRI | GAGGAG | 2 cut(s) | 665, 896 |
| BseXI | GCAGC | 2 cut(s) | 231, 1291 |
| BsgI | GTGCAG | 1 cut(s) | 1800 |
| BshFI | GGCC | 6 cut(s) | 494, 587, 723, 1017, 1498, 1739 |
| BsiHKAI | GWGCWC | 1 cut(s) | 532 |
| BsiHKCI | CYCGRG | 1 cut(s) | 746 |
| BsiSI | CCGG | 2 cut(s) | 568, 872 |
| BslFI | GGGAC | 1 cut(s) | 1664 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 730, 1110, 1128, 1766 |
| BsmAI | GTCTC | 7 cut(s) | 163, 422, 428, 701, 814, 1049, 1681 |
| BsmBI | CGTCTC | 1 cut(s) | 701 |
| BsmFI | GGGAC | 1 cut(s) | 1664 |
| BsmI | GAATGC | 1 cut(s) | 44 |
| BsnI | GGCC | 6 cut(s) | 494, 587, 723, 1017, 1498, 1739 |
| Bso31I | GGTCTC | 1 cut(s) | 428 |
| BsoBI | CYCGRG | 1 cut(s) | 746 |
| Bsp1286I | GDGCHC | 2 cut(s) | 10, 532 |
| Bsp143I | GATC | 4 cut(s) | 324, 439, 1205, 1456 |
| Bsp19I | CCATGG | 1 cut(s) | 207 |
| BspACI | CCGC | 2 cut(s) | 13, 1128 |
| BspANI | GGCC | 6 cut(s) | 494, 587, 723, 1017, 1498, 1739 |
| BspCNI | CTCAG | 4 cut(s) | 45, 424, 1219, 1676 |
| BspLI | GGNNCC | 2 cut(s) | 38, 1758 |
| BspPI | GGATC | 1 cut(s) | 434 |
| BspTNI | GGTCTC | 1 cut(s) | 428 |
| BsrDI | GCAATG | 1 cut(s) | 256 |
| BsrI | ACTGG | 5 cut(s) | 895, 1018, 1039, 1129, 1824 |
| BssECI | CCNNGG | 5 cut(s) | 207, 508, 1104, 1146, 1752 |
| BssMI | GATC | 4 cut(s) | 324, 439, 1205, 1456 |
| BssNI | GRCGYC | 1 cut(s) | 607 |
| BssSI | CACGAG | 1 cut(s) | 63 |
| BssT1I | CCWWGG | 3 cut(s) | 207, 1104, 1752 |
| Bst2BI | CACGAG | 1 cut(s) | 63 |
| Bst2UI | CCWGG | 1 cut(s) | 510 |
| Bst4CI | ACNGT | 4 cut(s) | 806, 951, 1605, 1827 |
| Bst6I | CTCTTC | 1 cut(s) | 30 |
| BstACI | GRCGYC | 1 cut(s) | 607 |
| BstBAI | YACGTR | 1 cut(s) | 719 |
| BstC8I | GCNNGC | 2 cut(s) | 605, 1130 |
| BstDEI | CTNAG | 5 cut(s) | 32, 432, 499, 1227, 1663 |
| BstDSI | CCRYGG | 1 cut(s) | 207 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 728, 1108 |
| BstF5I | GGATG | 5 cut(s) | 118, 1516, 1653, 1689, 1788 |
| BstKTI | GATC | 4 cut(s) | 327, 442, 1208, 1459 |
| BstMAI | GTCTC | 7 cut(s) | 163, 422, 428, 701, 814, 1049, 1681 |
| BstMBI | GATC | 4 cut(s) | 324, 439, 1205, 1456 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 500, 1106, 1313 |
| BstNI | CCWGG | 1 cut(s) | 510 |
| BstNSI | RCATGY | 1 cut(s) | 189 |
| BstSCI | CCNGG | 2 cut(s) | 508, 870 |
| BstV1I | GCAGC | 2 cut(s) | 231, 1291 |
| BstV2I | GAAGAC | 1 cut(s) | 1859 |
| BstX2I | RGATCY | 1 cut(s) | 1456 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1506 |
| BstYI | RGATCY | 1 cut(s) | 1456 |
| BsuRI | GGCC | 6 cut(s) | 494, 587, 723, 1017, 1498, 1739 |
| BtgI | CCRYGG | 1 cut(s) | 207 |
| BtsCI | GGATG | 5 cut(s) | 118, 1516, 1653, 1689, 1788 |
| BtsI | GCAGTG | 1 cut(s) | 1866 |
| BtsIMutI | CAGTG | 4 cut(s) | 1122, 1601, 1817, 1866 |
| Cac8I | GCNNGC | 2 cut(s) | 605, 1130 |
| CaiI | CAGNNNCTG | 1 cut(s) | 431 |
| Cfr13I | GGNCC | 2 cut(s) | 586, 1496 |
| CseI | GACGC | 1 cut(s) | 596 |
| Csp6I | GTAC | 3 cut(s) | 716, 784, 802 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 700, 735 |
| CviAII | CATG | 6 cut(s) | 107, 186, 208, 410, 524, 1165 |
| CviQI | GTAC | 3 cut(s) | 716, 784, 802 |
| DdeI | CTNAG | 5 cut(s) | 32, 432, 499, 1227, 1663 |
| DpnI | GATC | 4 cut(s) | 326, 441, 1207, 1458 |
| DpnII | GATC | 4 cut(s) | 324, 439, 1205, 1456 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1861 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1861 |
| Eam1104I | CTCTTC | 1 cut(s) | 30 |
| EarI | CTCTTC | 1 cut(s) | 30 |
| Eco130I | CCWWGG | 3 cut(s) | 207, 1104, 1752 |
| Eco147I | AGGCCT | 1 cut(s) | 1739 |
| Eco24I | GRGCYC | 1 cut(s) | 10 |
| Eco31I | GGTCTC | 1 cut(s) | 428 |
| Eco32I | GATATC | 1 cut(s) | 579 |
| Eco57I | CTGAAG | 1 cut(s) | 399 |
| Eco88I | CYCGRG | 1 cut(s) | 746 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 728, 1108 |
| EcoRI | GAATTC | 1 cut(s) | 866 |
| EcoRII | CCWGG | 1 cut(s) | 508 |
| EcoRV | GATATC | 1 cut(s) | 579 |
| EcoT14I | CCWWGG | 3 cut(s) | 207, 1104, 1752 |
| EcoT38I | GRGCYC | 1 cut(s) | 10 |
| ErhI | CCWWGG | 3 cut(s) | 207, 1104, 1752 |
| Esp3I | CGTCTC | 1 cut(s) | 701 |
| FaeI | CATG | 6 cut(s) | 110, 189, 211, 413, 527, 1168 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 460, 492, 482, 514 |
| FaqI | GGGAC | 1 cut(s) | 1664 |
| FatI | CATG | 6 cut(s) | 106, 185, 207, 409, 523, 1164 |
| FauI | CCCGC | 1 cut(s) | 1121 |
| Fnu4HI | GCNGC | 2 cut(s) | 220, 1305 |
| FokI | GGATG | 5 cut(s) | 125, 1523, 1640, 1696, 1795 |
| FriOI | GRGCYC | 1 cut(s) | 10 |
| Fsp4HI | GCNGC | 2 cut(s) | 220, 1305 |
| FspBI | CTAG | 4 cut(s) | 303, 863, 1110, 1442 |
| GluI | GCNGC | 2 cut(s) | 220, 1305 |
| GsuI | CTGGAG | 2 cut(s) | 437, 1743 |
| HaeIII | GGCC | 6 cut(s) | 494, 587, 723, 1017, 1498, 1739 |
| HapII | CCGG | 2 cut(s) | 568, 872 |
| HgaI | GACGC | 1 cut(s) | 596 |
| Hin1I | GRCGYC | 1 cut(s) | 607 |
| Hin1II | CATG | 6 cut(s) | 110, 189, 211, 413, 527, 1168 |
| HincII | GTYRAC | 2 cut(s) | 798, 1830 |
| HindII | GTYRAC | 2 cut(s) | 798, 1830 |
| HindIII | AAGCTT | 2 cut(s) | 1177, 1314 |
| HinfI | GANTC | 7 cut(s) | 128, 754, 1169, 1189, 1274, 1559, 1770 |
| HpaII | CCGG | 2 cut(s) | 568, 872 |
| HphI | GGTGA | 2 cut(s) | 785, 1700 |
| Hpy166II | GTNNAC | 3 cut(s) | 798, 1608, 1830 |
| Hpy188I | TCNGA | 8 cut(s) | 148, 286, 364, 379, 427, 640, 1666, 1867 |
| Hpy188III | TCNNGA | 6 cut(s) | 34, 320, 533, 746, 748, 1173 |
| Hpy8I | GTNNAC | 3 cut(s) | 798, 1608, 1830 |
| HpyCH4III | ACNGT | 4 cut(s) | 806, 951, 1605, 1827 |
| HpyCH4IV | ACGT | 2 cut(s) | 718, 800 |
| HpyCH4V | TGCA | 7 cut(s) | 242, 689, 891, 1307, 1514, 1570, 1817 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 500, 1106, 1313 |
| HpyF3I | CTNAG | 5 cut(s) | 32, 432, 499, 1227, 1663 |
| HpySE526I | ACGT | 2 cut(s) | 718, 800 |
| Hsp92I | GRCGYC | 1 cut(s) | 607 |
| Hsp92II | CATG | 6 cut(s) | 110, 189, 211, 413, 527, 1168 |
| Kzo9I | GATC | 4 cut(s) | 324, 439, 1205, 1456 |
| LmnI | GCTCC | 4 cut(s) | 85, 652, 1042, 1762 |
| Lsp1109I | GCAGC | 2 cut(s) | 231, 1291 |
| LweI | GCATC | 1 cut(s) | 1501 |
| MaeI | CTAG | 4 cut(s) | 303, 863, 1110, 1442 |
| MaeII | ACGT | 2 cut(s) | 718, 800 |
| MaeIII | GTNAC | 1 cut(s) | 874 |
| MalI | GATC | 4 cut(s) | 326, 441, 1207, 1458 |
| MboI | GATC | 4 cut(s) | 324, 439, 1205, 1456 |
| MflI | RGATCY | 1 cut(s) | 1456 |
| MhlI | GDGCHC | 2 cut(s) | 10, 532 |
| MluCI | AATT | 9 cut(s) | 79, 93, 315, 353, 357, 595, 668, 866, 1623 |
| MlyI | GAGTC | 1 cut(s) | 137 |
| MmeI | TCCRAC | 3 cut(s) | 627, 1528, 1845 |
| MroXI | GAANNNNTTC | 1 cut(s) | 315 |
| MslI | CAYNNNNRTG | 1 cut(s) | 111 |
| MspA1I | CMGCKG | 1 cut(s) | 941 |
| MspI | CCGG | 2 cut(s) | 568, 872 |
| MspR9I | CCNGG | 2 cut(s) | 510, 872 |
| Mva1269I | GAATGC | 1 cut(s) | 44 |
| MvaI | CCWGG | 1 cut(s) | 510 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 500, 1106, 1313 |
| NciI | CCSGG | 1 cut(s) | 872 |
| NcoI | CCATGG | 1 cut(s) | 207 |
| NdeII | GATC | 4 cut(s) | 324, 439, 1205, 1456 |
| NlaIII | CATG | 6 cut(s) | 110, 189, 211, 413, 527, 1168 |
| NlaIV | GGNNCC | 2 cut(s) | 38, 1758 |
| NmeAIII | GCCGAG | 2 cut(s) | 678, 1171 |
| NmuCI | GTSAC | 1 cut(s) | 874 |
| NspI | RCATGY | 1 cut(s) | 189 |
| PaeR7I | CTCGAG | 1 cut(s) | 746 |
| PceI | AGGCCT | 1 cut(s) | 1739 |
| PciI | ACATGT | 1 cut(s) | 185 |
| PctI | GAATGC | 1 cut(s) | 44 |
| PdmI | GAANNNNTTC | 1 cut(s) | 315 |
| PfeI | GAWTC | 6 cut(s) | 754, 1169, 1189, 1274, 1559, 1770 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1766 |
| PkrI | GCNGC | 2 cut(s) | 221, 1306 |
| PleI | GAGTC | 1 cut(s) | 136 |
| PpsI | GAGTC | 1 cut(s) | 136 |
| Ppu21I | YACGTR | 1 cut(s) | 719 |
| PscI | ACATGT | 1 cut(s) | 185 |
| PshBI | ATTAAT | 1 cut(s) | 356 |
| Psp6I | CCWGG | 1 cut(s) | 508 |
| PspGI | CCWGG | 1 cut(s) | 508 |
| PspN4I | GGNNCC | 2 cut(s) | 38, 1758 |
| PspPI | GGNCC | 2 cut(s) | 586, 1496 |
| PstNI | CAGNNNCTG | 1 cut(s) | 431 |
| PsuI | RGATCY | 1 cut(s) | 1456 |
| PvuII | CAGCTG | 1 cut(s) | 941 |
| RsaI | GTAC | 3 cut(s) | 717, 785, 803 |
| RsaNI | GTAC | 3 cut(s) | 716, 784, 802 |
| RseI | CAYNNNNRTG | 1 cut(s) | 111 |
| SatI | GCNGC | 2 cut(s) | 220, 1305 |
| Sau3AI | GATC | 4 cut(s) | 324, 439, 1205, 1456 |
| Sau96I | GGNCC | 2 cut(s) | 586, 1496 |
| SchI | GAGTC | 1 cut(s) | 137 |
| ScrFI | CCNGG | 2 cut(s) | 510, 872 |
| SduI | GDGCHC | 2 cut(s) | 10, 532 |
| SfaNI | GCATC | 1 cut(s) | 1501 |
| Sfr274I | CTCGAG | 1 cut(s) | 746 |
| SlaI | CTCGAG | 1 cut(s) | 746 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 111 |
| SmlI | CTYRAG | 1 cut(s) | 746 |
| SmoI | CTYRAG | 1 cut(s) | 746 |
| Sse9I | AATT | 9 cut(s) | 79, 93, 315, 353, 357, 595, 668, 866, 1623 |
| SseBI | AGGCCT | 1 cut(s) | 1739 |
| SsiI | CCGC | 2 cut(s) | 13, 1128 |
| SspI | AATATT | 2 cut(s) | 456, 1637 |
| SspMI | CTAG | 4 cut(s) | 303, 863, 1110, 1442 |
| StuI | AGGCCT | 1 cut(s) | 1739 |
| StyD4I | CCNGG | 2 cut(s) | 508, 870 |
| StyI | CCWWGG | 3 cut(s) | 207, 1104, 1752 |
| TaaI | ACNGT | 4 cut(s) | 806, 951, 1605, 1827 |
| TaiI | ACGT | 2 cut(s) | 721, 803 |
| TaqI | TCGA | 3 cut(s) | 747, 1204, 1311 |
| TaqII | GACCGA | 1 cut(s) | 452 |
| TasI | AATT | 9 cut(s) | 79, 93, 315, 353, 357, 595, 668, 866, 1623 |
| TfiI | GAWTC | 6 cut(s) | 754, 1169, 1189, 1274, 1559, 1770 |
| TscAI | CASTG | 4 cut(s) | 1129, 1608, 1824, 1866 |
| TseFI | GTSAC | 1 cut(s) | 874 |
| TseI | GCWGC | 2 cut(s) | 219, 1304 |
| Tsp45I | GTSAC | 1 cut(s) | 874 |
| TspRI | CASTG | 4 cut(s) | 1129, 1608, 1824, 1866 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1766 |
| VspI | ATTAAT | 1 cut(s) | 356 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 728, 1108 |
| XapI | RAATTY | 2 cut(s) | 668, 866 |
| XceI | RCATGY | 1 cut(s) | 189 |
| XhoI | CTCGAG | 1 cut(s) | 746 |
| XmnI | GAANNNNTTC | 1 cut(s) | 315 |
| XspI | CTAG | 4 cut(s) | 303, 863, 1110, 1442 |