Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0006632

Physical Location & Seq

Genomic Coordinates Reverse (-)

48373099 .. 48378811

Gene Structure 5713 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00117730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGTGGGCTCTTCGTCGTGTATCTCTTCCTCTCAGGAAGCAAGGATTTAGCATTGGAACTTCCCATGCTTGTTGTGCTAATTTGGAGCTACCAATTACTTACATACAAGACAAGCCTTCTTTCCTCGAGTCCCCTCAATCAGTCTCCGATGGATTTCTGCCTTCCAAGAGATTATACCACACAACGGATGTTTTGTCAAAGTTCTCTATAGATAGACGCAGCCTTTCTTCACAAGCTGGTACAAAAAGCAGTGGGGAGGAAGATGACTTGGAAGATGGGTTTTCTGAACTTGAAACGCCACCTATTGCTGAGGCAATTCAGGTGAGCAATACAAACGATGAAAATGAAGATGAATTAATCTCTGGACCAGAAGTCTCTGATGATGGAGAAGACATTGAACCTTCCCAAAATGAGCTGGAGTTATCAGAGACTGAGACCGATCCAAATGAGAAAAGGTCGCCAAGGAAAAGGGATGTTTCAGCACTTTTCAAAGCCATCTTAGAATTTCCTGGTTTATCTGTTCATAGTGCTCTGGATAAGTGGGTTAAAGAAGGAAATGATTTAAGTAGGGCAGAGATCTCATTGGCCATGCTAAACTTACGCAGACGTCGAATGTTTGGGAGGGCGTTGCAGCTCTCAGAGTGGTTGGAAGCACATAAGCAGATCGAATTTACTGAAAGAGATTATGCATCTCGCCTGGACTTAATTTCCAAAATACGTGGCCTCCAGAAGGCAGAGAAGTATGTTGAGATGATCCCACAGTCCTTTAGAGGTGAGGTAATCTACCGAACCCTGTTGGCTAATTGCGTTGCTGCCAACAATTTGAAGAAAGCCGAGGACATTTTCAACAAAATGAAGGATCTAGAATTCCCAGTTACCTCATTTACATGCAACCAGTTGCTCCTTCTTTACAAAAGGCTTGACAAGAAGAAAATAGCAGATGTCTTGCTTTTTATGGAGAAAGAAAATGTGAAGCCGACTGCCTTCACTTATAAACTATTAATAGATACCAAAGGCCAATCCAATGACATAGCTGGAATGGAACAAGTTTACGAAACAATGAAAACTGAAGGCATTGAACCAGACATTACTGTAAAAGCTATCATGGCTAAGCATTATGCCTCTGGTGGACTGAAAGAAAAAGCTGAGGTTCTTTTGAAGGAGATGGAAGGCGGTAACTTAAAGGAGAACCGCTGGGCTTGCCGAACTTTGCTTCCCCTTTATGCAGAACTGGGTCAGGTTGATGAAGTGGGGAGAGTTTGGAAGGTTTGTGTGTCAAATCCTCGGGTTGAAGAATGCTTAGCTGCAATTGAAGCTTGGGGAAAGGTGAATAAAATTGAAGAAGCAGAGGCGGTTTTTGATAAGATGTTGAAAACATGGAAGAGACTTTCTTCCAGGCAGTATGCTGTGCTTTTGAAGGTGTATACGAACCATAAGATGCTTGCGAAAGGCAAAGATCTTGTTAAGCTTATGGCAGATAGCAATTGCGAGATTGGCCCATTAATTTGGGATGCACTTGTAAAACTCTATGTGGAAACTGGAGAGGTTGAAAAGGCTGATTCTATTTTGCAGAAGGCTGCTGAGAAGAACCAGAAGAAGCCAATGTTTAGTTCTTATATGGCTATAATGGATCAATATTCAAGGAGGGGTGATATCCATAACTCAGAAAAGATATTTTATAGGATGAGACAGGCCGGTTACACAGCTCGACTTCGTCAGTTCCAATCTCTTGTCCAGGCCTATATAAATGCCAAGGCTCCAGCCTATGGAATCTGGGAGAGAATGAAGTCAGATAATATCTTTCCCAACAAAGCTCTGCTTGGGCAGCTGACACAAGTCGATCCATTTAAGAAGACAGCAGTGTCTGATTTGCTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0031967 GO:0031975 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_3

Protein Analysis

626

Amino Acids

71.15

Weight (kDa)

6.16

Isoelectric Point (pI)

48.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15480 AT1G80270 AT1G80270 AT1G80270 AT1G80270 AT1G80270
fragaria_vesca	FvH4_6g25350
malus_domestica	MD12G1096000.v1.1 MD14G1090300.v1.1
prunus_persica	Prupe.7G034000_v2.0.a1 Prupe.7G034000_v2.0.a1
pyrus_communis	pycom12g08300 pycom14g08090
rosa_chinensis	RchiOBHm_Chr2g0125771
rosa_laevigata	RLG00000018879
rosa_multiflora	Rmu_sc0005557.1_g000002 Rmu_sc0026259.1_g000001 Rmu_sc0026260.1_g000001 Rmu_ssc0000055.1_g000010
rosa_roxburghii	Rroxscaffold_2G00117730
rosa_rugosa	Rorug02G0259300
rosa_samantha	Rh2AG317300 Rh2BG325300 Rh2CG307100 Rh2DG343300
rosa_wichuraiana	Rw2G025670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	993
AasI	GACNNNNNNGTC	1 cut(s)	1861
AatII	GACGTC	1 cut(s)	610
AccB7I	CCANNNNNTGG	1 cut(s)	1766
AccI	GTMKAC	1 cut(s)	1424
AciI	CCGC	3 cut(s)	1173, 1192, 1352
AclWI	GGATC	5 cut(s)	434, 748, 867, 1638, 1835
AcoI	YGGCCR	1 cut(s)	585
AcsI	RAATTY	3 cut(s)	503, 668, 866
AcuI	CTGAAG	1 cut(s)	1089
AcyI	GRCGYC	1 cut(s)	607
AfaI	GTAC	1 cut(s)	241
AfiI	CCNNNNNNNGG	3 cut(s)	184, 730, 1766
AhdI	GACNNNNNGTC	1 cut(s)	371
AjnI	CCWGG	4 cut(s)	508, 696, 1394, 1734
AjuI	GAANNNNNNNTTGG	2 cut(s)	1594, 1626
AloI	GAACNNNNNNTCC	2 cut(s)	1198, 1230
Alw21I	GWGCWC	1 cut(s)	532
Alw26I	GTCTC	6 cut(s)	148, 379, 422, 428, 1378, 1681
AlwI	GGATC	5 cut(s)	434, 748, 867, 1638, 1835
AlwNI	CAGNNNCTG	2 cut(s)	431, 1865
Ama87I	CYCGRG	2 cut(s)	125, 1284
AoxI	GGCC	6 cut(s)	585, 721, 1015, 1495, 1692, 1737
ApeKI	GCWGC	6 cut(s)	219, 631, 812, 1304, 1577, 1825
ApoI	RAATTY	3 cut(s)	503, 668, 866
AseI	ATTAAT	3 cut(s)	356, 1001, 1502
AspS9I	GGNCC	2 cut(s)	365, 1496
AsuHPI	GGTGA	4 cut(s)	334, 785, 1339, 1661
AvaI	CYCGRG	2 cut(s)	125, 1284
AvaII	GGWCC	1 cut(s)	365
BalI	TGGCCA	1 cut(s)	587
BanII	GRGCYC	1 cut(s)	10
BbsI	GAAGAC	2 cut(s)	396, 1859
Bbv12I	GWGCWC	1 cut(s)	532
BbvCI	CCTCAGC	2 cut(s)	309, 1146
BbvI	GCAGC	6 cut(s)	231, 643, 799, 1291, 1564, 1837
BccI	CCATC	5 cut(s)	143, 269, 377, 503, 1159
BciT130I	CCWGG	4 cut(s)	510, 698, 1396, 1736
BcoDI	GTCTC	6 cut(s)	148, 379, 422, 428, 1378, 1681
BfaI	CTAG	1 cut(s)	863
BfmI	CTRYAG	1 cut(s)	207
BglII	AGATCT	2 cut(s)	576, 1456
BisI	GCNGC	6 cut(s)	220, 632, 813, 1305, 1578, 1826
BlpI	GCTNAGC	2 cut(s)	1110, 1300
BlsI	GCNGC	6 cut(s)	221, 633, 814, 1306, 1579, 1827
Bme1390I	CCNGG	4 cut(s)	510, 698, 1396, 1736
Bme18I	GGWCC	1 cut(s)	365
BmeRI	GACNNNNNGTC	1 cut(s)	371
BmeT110I	CYCGRG	2 cut(s)	125, 1284
BmgT120I	GGNCC	2 cut(s)	365, 1496
BmiI	GGNNCC	1 cut(s)	1758
BmrFI	CCNGG	4 cut(s)	510, 698, 1396, 1736
BmrI	ACTGGG	2 cut(s)	866, 1241
BmsI	GCATC	3 cut(s)	698, 1428, 1501
BmuI	ACTGGG	2 cut(s)	866, 1241
BoxI	GACNNNNGTC	1 cut(s)	1835
BpiI	GAAGAC	2 cut(s)	396, 1859
BpmI	CTGGAG	4 cut(s)	437, 710, 1560, 1743
Bpu10I	CCTNAGC	2 cut(s)	309, 1146
Bpu1102I	GCTNAGC	2 cut(s)	1110, 1300
BsaAI	YACGTR	1 cut(s)	719
BsaHI	GRCGYC	1 cut(s)	607
BsaI	GGTCTC	1 cut(s)	428
BsaJI	CCNNGG	4 cut(s)	461, 834, 1283, 1752
BsaXI	ACNNNNNCTCC	2 cut(s)	708, 738
Bsc4I	CCNNNNNNNGG	3 cut(s)	184, 730, 1766
Bse118I	RCCGGY	1 cut(s)	1694
Bse1I	ACTGG	4 cut(s)	872, 895, 1236, 1543
BseBI	CCWGG	4 cut(s)	510, 698, 1396, 1736
BseDI	CCNNGG	4 cut(s)	461, 834, 1283, 1752
BseGI	GGATG	4 cut(s)	193, 478, 1516, 1689
BseLI	CCNNNNNNNGG	3 cut(s)	184, 730, 1766
BseMII	CTCAG	7 cut(s)	46, 300, 423, 651, 1137, 1572, 1677
BseNI	ACTGG	4 cut(s)	872, 895, 1236, 1543
BseXI	GCAGC	6 cut(s)	231, 643, 799, 1291, 1564, 1837
BseYI	CCCAGC	1 cut(s)	1194
BshFI	GGCC	6 cut(s)	587, 723, 1017, 1497, 1694, 1739
BsiHKAI	GWGCWC	1 cut(s)	532
BsiHKCI	CYCGRG	2 cut(s)	125, 1284
BsiSI	CCGG	1 cut(s)	1695
BslFI	GGGAC	1 cut(s)	115
BslI	CCNNNNNNNGG	3 cut(s)	184, 730, 1766
BsmAI	GTCTC	6 cut(s)	148, 379, 422, 428, 1378, 1681
BsmFI	GGGAC	1 cut(s)	115
BsmI	GAATGC	1 cut(s)	1301
BsnI	GGCC	6 cut(s)	587, 723, 1017, 1497, 1694, 1739
Bso31I	GGTCTC	1 cut(s)	428
BsoBI	CYCGRG	2 cut(s)	125, 1284
Bsp1286I	GDGCHC	2 cut(s)	10, 532
Bsp143I	GATC	8 cut(s)	439, 576, 663, 753, 859, 1456, 1630, 1840
Bsp1720I	GCTNAGC	2 cut(s)	1110, 1300
BspACI	CCGC	3 cut(s)	1173, 1192, 1352
BspANI	GGCC	6 cut(s)	587, 723, 1017, 1497, 1694, 1739
BspCNI	CTCAG	7 cut(s)	45, 301, 424, 650, 1138, 1573, 1676
BspLI	GGNNCC	1 cut(s)	1758
BspPI	GGATC	5 cut(s)	434, 748, 867, 1638, 1835
BspQI	GCTCTTC	1 cut(s)	15
BspTNI	GGTCTC	1 cut(s)	428
BsrFI	RCCGGY	1 cut(s)	1694
BsrI	ACTGG	4 cut(s)	872, 895, 1236, 1543
BssAI	RCCGGY	1 cut(s)	1694
BssECI	CCNNGG	4 cut(s)	461, 834, 1283, 1752
BssMI	GATC	8 cut(s)	439, 576, 663, 753, 859, 1456, 1630, 1840
BssNAI	GTATAC	1 cut(s)	1425
BssNI	GRCGYC	1 cut(s)	607
BssT1I	CCWWGG	2 cut(s)	461, 1752
Bst1107I	GTATAC	1 cut(s)	1425
Bst2UI	CCWGG	4 cut(s)	510, 698, 1396, 1736
Bst4CI	ACNGT	2 cut(s)	762, 1093
Bst6I	CTCTTC	3 cut(s)	15, 30, 1376
BstACI	GRCGYC	1 cut(s)	607
BstBAI	YACGTR	1 cut(s)	719
BstC8I	GCNNGC	2 cut(s)	1201, 1443
BstENI	CCTNNNNNAGG	1 cut(s)	728
BstF5I	GGATG	4 cut(s)	193, 478, 1516, 1689
BstKTI	GATC	8 cut(s)	442, 579, 666, 756, 862, 1459, 1633, 1843
BstMAI	GTCTC	6 cut(s)	148, 379, 422, 428, 1378, 1681
BstMBI	GATC	8 cut(s)	439, 576, 663, 753, 859, 1456, 1630, 1840
BstMWI	GCNNNNNNNGC	6 cut(s)	74, 1106, 1200, 1313, 1494, 1825
BstNI	CCWGG	4 cut(s)	510, 698, 1396, 1736
BstNSI	RCATGY	1 cut(s)	891
BstPAI	GACNNNNGTC	1 cut(s)	1835
BstSCI	CCNGG	4 cut(s)	508, 696, 1394, 1734
BstSFI	CTRYAG	1 cut(s)	207
BstV1I	GCAGC	6 cut(s)	231, 643, 799, 1291, 1564, 1837
BstV2I	GAAGAC	2 cut(s)	396, 1859
BstX2I	RGATCY	3 cut(s)	576, 859, 1456
BstXI	CCANNNNNNTGG	1 cut(s)	1506
BstYI	RGATCY	3 cut(s)	576, 859, 1456
BstZ17I	GTATAC	1 cut(s)	1425
BsuRI	GGCC	6 cut(s)	587, 723, 1017, 1497, 1694, 1739
BtsCI	GGATG	4 cut(s)	193, 478, 1516, 1689
BtsI	GCAGTG	2 cut(s)	256, 1866
BtsIMutI	CAGTG	2 cut(s)	256, 1866
Cac8I	GCNNGC	2 cut(s)	1201, 1443
CaiI	CAGNNNCTG	2 cut(s)	431, 1865
Cfr10I	RCCGGY	1 cut(s)	1694
Cfr13I	GGNCC	2 cut(s)	365, 1496
CseI	GACGC	1 cut(s)	225
Csp6I	GTAC	1 cut(s)	240
CspCI	CAANNNNNGTGG	2 cut(s)	700, 735
CviAII	CATG	5 cut(s)	65, 589, 888, 1105, 1377
CviQI	GTAC	1 cut(s)	240
DpnI	GATC	8 cut(s)	441, 578, 665, 755, 861, 1458, 1632, 1842
DpnII	GATC	8 cut(s)	439, 576, 663, 753, 859, 1456, 1630, 1840
DrdI	GACNNNNNNGTC	1 cut(s)	1861
DriI	GACNNNNNGTC	1 cut(s)	371
DseDI	GACNNNNNNGTC	1 cut(s)	1861
EaeI	YGGCCR	1 cut(s)	585
Eam1104I	CTCTTC	3 cut(s)	15, 30, 1376
Eam1105I	GACNNNNNGTC	1 cut(s)	371
EarI	CTCTTC	3 cut(s)	15, 30, 1376
Eco130I	CCWWGG	2 cut(s)	461, 1752
Eco147I	AGGCCT	1 cut(s)	1739
Eco24I	GRGCYC	1 cut(s)	10
Eco31I	GGTCTC	1 cut(s)	428
Eco32I	GATATC	1 cut(s)	1654
Eco47I	GGWCC	1 cut(s)	365
Eco57I	CTGAAG	1 cut(s)	1089
Eco88I	CYCGRG	2 cut(s)	125, 1284
EcoNI	CCTNNNNNAGG	1 cut(s)	728
EcoRI	GAATTC	1 cut(s)	866
EcoRII	CCWGG	4 cut(s)	508, 696, 1394, 1734
EcoRV	GATATC	1 cut(s)	1654
EcoT14I	CCWWGG	2 cut(s)	461, 1752
EcoT22I	ATGCAT	1 cut(s)	691
EcoT38I	GRGCYC	1 cut(s)	10
ErhI	CCWWGG	2 cut(s)	461, 1752
FaeI	CATG	5 cut(s)	68, 592, 891, 1108, 1380
FalI	AAGNNNNNCTT	2 cut(s)	1803, 1835
FaqI	GGGAC	1 cut(s)	115
FatI	CATG	5 cut(s)	64, 588, 887, 1104, 1376
FblI	GTMKAC	1 cut(s)	1424
Fnu4HI	GCNGC	6 cut(s)	220, 632, 813, 1305, 1578, 1826
FokI	GGATG	4 cut(s)	200, 485, 1523, 1696
FriOI	GRGCYC	1 cut(s)	10
Fsp4HI	GCNGC	6 cut(s)	220, 632, 813, 1305, 1578, 1826
FspBI	CTAG	1 cut(s)	863
GluI	GCNGC	6 cut(s)	220, 632, 813, 1305, 1578, 1826
GsaI	CCCAGC	1 cut(s)	1198
GsuI	CTGGAG	4 cut(s)	437, 710, 1560, 1743
HaeIII	GGCC	6 cut(s)	587, 723, 1017, 1497, 1694, 1739
HapII	CCGG	1 cut(s)	1695
HgaI	GACGC	1 cut(s)	225
Hin1I	GRCGYC	1 cut(s)	607
Hin1II	CATG	5 cut(s)	68, 592, 891, 1108, 1380
HindIII	AAGCTT	2 cut(s)	1314, 1466
HinfI	GANTC	3 cut(s)	128, 1559, 1770
HpaII	CCGG	1 cut(s)	1695
HphI	GGTGA	4 cut(s)	334, 785, 1339, 1661
Hpy166II	GTNNAC	3 cut(s)	1051, 1130, 1425
Hpy188I	TCNGA	8 cut(s)	148, 286, 379, 427, 640, 1666, 1792, 1867
Hpy188III	TCNNGA	5 cut(s)	34, 363, 533, 727, 863
Hpy8I	GTNNAC	3 cut(s)	1051, 1130, 1425
Hpy99I	CGWCG	2 cut(s)	18, 612
HpyCH4III	ACNGT	2 cut(s)	762, 1093
HpyCH4IV	ACGT	2 cut(s)	607, 718
HpyCH4V	TGCA	7 cut(s)	631, 689, 891, 1226, 1307, 1514, 1570
HpyF10VI	GCNNNNNNNGC	6 cut(s)	74, 1106, 1200, 1313, 1494, 1825
HpySE526I	ACGT	2 cut(s)	607, 718
Hsp92I	GRCGYC	1 cut(s)	607
Hsp92II	CATG	5 cut(s)	68, 592, 891, 1108, 1380
Kzo9I	GATC	8 cut(s)	439, 576, 663, 753, 859, 1456, 1630, 1840
LguI	GCTCTTC	1 cut(s)	15
LmnI	GCTCC	3 cut(s)	85, 906, 1762
Lsp1109I	GCAGC	6 cut(s)	231, 643, 799, 1291, 1564, 1837
LweI	GCATC	3 cut(s)	698, 1428, 1501
MaeI	CTAG	1 cut(s)	863
MaeII	ACGT	2 cut(s)	607, 718
MaeIII	GTNAC	3 cut(s)	874, 1175, 1697
MalI	GATC	8 cut(s)	441, 578, 665, 755, 861, 1458, 1632, 1842
MboI	GATC	8 cut(s)	439, 576, 663, 753, 859, 1456, 1630, 1840
MfeI	CAATTG	2 cut(s)	1308, 1483
MflI	RGATCY	3 cut(s)	576, 859, 1456
MhlI	GDGCHC	2 cut(s)	10, 532
MlsI	TGGCCA	1 cut(s)	587
MluNI	TGGCCA	1 cut(s)	587
MlyI	GAGTC	1 cut(s)	137
MmeI	TCCRAC	1 cut(s)	627
Mox20I	TGGCCA	1 cut(s)	587
Mph1103I	ATGCAT	1 cut(s)	691
MscI	TGGCCA	1 cut(s)	587
MseI	TTAA	9 cut(s)	356, 546, 563, 704, 1001, 1181, 1464, 1502, 1848
MslI	CAYNNNNRTG	1 cut(s)	886
Msp20I	TGGCCA	1 cut(s)	587
MspA1I	CMGCKG	2 cut(s)	1194, 1828
MspI	CCGG	1 cut(s)	1695
MspR9I	CCNGG	4 cut(s)	510, 698, 1396, 1736
MunI	CAATTG	2 cut(s)	1308, 1483
Mva1269I	GAATGC	1 cut(s)	1301
MvaI	CCWGG	4 cut(s)	510, 698, 1396, 1736
MwoI	GCNNNNNNNGC	6 cut(s)	74, 1106, 1200, 1313, 1494, 1825
NdeII	GATC	8 cut(s)	439, 576, 663, 753, 859, 1456, 1630, 1840
NlaIII	CATG	5 cut(s)	68, 592, 891, 1108, 1380
NlaIV	GGNNCC	1 cut(s)	1758
NmeAIII	GCCGAG	1 cut(s)	859
NsiI	ATGCAT	1 cut(s)	691
NspI	RCATGY	1 cut(s)	891
PaeR7I	CTCGAG	1 cut(s)	125
PceI	AGGCCT	1 cut(s)	1739
PciSI	GCTCTTC	1 cut(s)	15
PcsI	WCGNNNNNNNCGW	1 cut(s)	607
PctI	GAATGC	1 cut(s)	1301
PfeI	GAWTC	2 cut(s)	1559, 1770
PflFI	GACNNNGTC	1 cut(s)	1713
PflMI	CCANNNNNTGG	1 cut(s)	1766
PkrI	GCNGC	6 cut(s)	221, 633, 814, 1306, 1579, 1827
PleI	GAGTC	1 cut(s)	136
PpsI	GAGTC	1 cut(s)	136
Ppu21I	YACGTR	1 cut(s)	719
PshAI	GACNNNNGTC	1 cut(s)	1835
PshBI	ATTAAT	3 cut(s)	356, 1001, 1502
PsiI	TTATAA	1 cut(s)	993
Psp6I	CCWGG	4 cut(s)	508, 696, 1394, 1734
PspFI	CCCAGC	1 cut(s)	1194
PspGI	CCWGG	4 cut(s)	508, 696, 1394, 1734
PspN4I	GGNNCC	1 cut(s)	1758
PspPI	GGNCC	2 cut(s)	365, 1496
PspXI	VCTCGAGB	1 cut(s)	125
PstNI	CAGNNNCTG	2 cut(s)	431, 1865
PsuI	RGATCY	3 cut(s)	576, 859, 1456
PsyI	GACNNNGTC	1 cut(s)	1713
PvuII	CAGCTG	1 cut(s)	1828
RsaI	GTAC	1 cut(s)	241
RsaNI	GTAC	1 cut(s)	240
RseI	CAYNNNNRTG	1 cut(s)	886
SapI	GCTCTTC	1 cut(s)	15
SaqAI	TTAA	9 cut(s)	356, 546, 563, 704, 1001, 1181, 1464, 1502, 1848
SatI	GCNGC	6 cut(s)	220, 632, 813, 1305, 1578, 1826
Sau3AI	GATC	8 cut(s)	439, 576, 663, 753, 859, 1456, 1630, 1840
Sau96I	GGNCC	2 cut(s)	365, 1496
SchI	GAGTC	1 cut(s)	137
ScrFI	CCNGG	4 cut(s)	510, 698, 1396, 1736
SduI	GDGCHC	2 cut(s)	10, 532
SfaNI	GCATC	3 cut(s)	698, 1428, 1501
SfcI	CTRYAG	1 cut(s)	207
Sfr274I	CTCGAG	1 cut(s)	125
SinI	GGWCC	1 cut(s)	365
SlaI	CTCGAG	1 cut(s)	125
SmiMI	CAYNNNNRTG	1 cut(s)	886
SmlI	CTYRAG	1 cut(s)	125
SmoI	CTYRAG	1 cut(s)	125
SseBI	AGGCCT	1 cut(s)	1739
SsiI	CCGC	3 cut(s)	1173, 1192, 1352
SspI	AATATT	1 cut(s)	1637
SspMI	CTAG	1 cut(s)	863
StuI	AGGCCT	1 cut(s)	1739
StyD4I	CCNGG	4 cut(s)	508, 696, 1394, 1734
StyI	CCWWGG	2 cut(s)	461, 1752
TaaI	ACNGT	2 cut(s)	762, 1093
TaiI	ACGT	2 cut(s)	610, 721
TaqI	TCGA	5 cut(s)	126, 610, 666, 1708, 1839
TaqII	GACCGA	1 cut(s)	452
TfiI	GAWTC	2 cut(s)	1559, 1770
Tru1I	TTAA	9 cut(s)	356, 546, 563, 704, 1001, 1181, 1464, 1502, 1848
Tru9I	TTAA	9 cut(s)	356, 546, 563, 704, 1001, 1181, 1464, 1502, 1848
TscAI	CASTG	2 cut(s)	256, 1866
TseI	GCWGC	6 cut(s)	219, 631, 812, 1304, 1577, 1825
TspDTI	ATGAA	8 cut(s)	354, 360, 366, 512, 869, 1076, 1260, 1799
TspGWI	ACGGA	1 cut(s)	200
TspRI	CASTG	2 cut(s)	256, 1866
Tth111I	GACNNNGTC	1 cut(s)	1713
Van91I	CCANNNNNTGG	1 cut(s)	1766
VpaK11BI	GGWCC	1 cut(s)	365
VspI	ATTAAT	3 cut(s)	356, 1001, 1502
XagI	CCTNNNNNAGG	1 cut(s)	728
XapI	RAATTY	3 cut(s)	503, 668, 866
XbaI	TCTAGA	1 cut(s)	862
XceI	RCATGY	1 cut(s)	891
XhoI	CTCGAG	1 cut(s)	125
XmiI	GTMKAC	1 cut(s)	1424
XspI	CTAG	1 cut(s)	863
ZraI	GACGTC	1 cut(s)	608
Zsp2I	ATGCAT	1 cut(s)	691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.