Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0011577

Physical Location & Seq

Genomic Coordinates Reverse (-)

14877633 .. 14880428

Gene Structure 2796 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGCTAGATCTCAACCTCGGGTTCGTCTCCCACGACGTCGTTCCCGATTCCCACCACAAGCTTCTCTCCACCACCCCGATCGAAAGCTCCGAAAGCTTCAACTCCTCCTCCAACCTCACCCTCGCCGGCGAAGACGACGACAACTCCGCTACTCTCAACTTCCTTGCTCCGAACGACGACGTATCCGCTAATCACTACGACGGTCGGAGGACTATCCAGCTCTTTCCGCTCGCCCAATCCGTACGCTCTTCTTCGTCGTCGTCGGCTTCTAAGAAGCAGTGGCTGGGACGATCGTCCGGTTCCAGATTGGAGCTGGAGCCGATTTACTATGCTCCTGCGGAGCAGAGGATTGCGCCACCGCAGCAAGTGAAGAAGAGCCGGAGAGGGCCCCGGTCCCGGAGCTCGCAGTATCGGGGCGTTACGTTTTATCGAAGAACCGGGAGATGGGAATCCCATATTTGGGATTGCGGGAAACAAGTGTACTTGGGAGGATTTGACACTGCCCATTCTGCTGCTAGGGCGTATGATCGAGCTGCGATCAAATTCCGTGGAACTGAGGCTGATATTAACTTCAGTGTCAGTGATTATGAGGATGATATTAAGCAGATGAGTAATTTTACAAAGGAACAATTTGTGCATATCCTGCGCCGCCAGAGTACTGGGTTCTCTAGAGGAAGCTCGAAATTCAGGGGAGTCACATTGCACAAATGTGGCCGCTGGGAAGCTCGTATGGGCCAGTTTCTGGGCAAGAAGGCATATGACAAGGCTGCCATTGAGTGCAATGGAAGAGAAGCAGTCACCAACTTCGATTCAAGCTCATATGATGGGGAGTTAATGTCTGAGGCCAATAACAAGGGCAGCCACCAAAATCTTGATCTGAACTTGGGAATTGCTCCCCCTTTCGTTTCTGAAATCCAAAAGGAGAACATCAATTTGAGCAGCTTTCCTTTTCAGCTAGGCTGTGACGGCATTCCTATTCACACAAGAGCAAGGAATGCGAACTCTGTTCCAGCACCTATGAGGTCTCAACTTTCTCATGGCTCAATGGTAGCGTCTGAGGTGCCTCCTATAATGAGCAACATGAATTCCAGTTTCTTTCCCATTCATATGGAAAGAGCTATGGAGAAGAGTATGGATGTTAACTCATTTCCCAGTCGGGCTTGGCAACTCCAAGACCTGAATGGCGGGCCAACTTCCATGCCACTCTTCTCTGCTGCAGCATCATCAGGATTCCCTTCTTCAACAGCCACTTCATCGTCATCAGCTGTCACTCAACTTCATTTCCCTAACAAGGCGATTCTCCGCCACCAATTTTCAACGTATTCACCACCAACACCCCCCATTTTTATTGCAGAGGCTGAAAACCAGAAGCAGTTCACGATCGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0010073 GO:0010093 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048449 GO:0048467 GO:0048481 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

463

Amino Acids

51.09

Weight (kDa)

8.75

Isoelectric Point (pI)

67.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	136 - 184	6.6e-10	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011577)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g15180 FvH4_6g15180
malus_domestica	MD04G1105200.v1.1 MD12G1125900.v1.1
prunus_persica	Prupe.6G242400_v2.0.a1 Prupe.6G242400_v2.0.a1
pyrus_communis	pycom04g10050 pycom12g12410
rosa_chinensis	RchiOBHm_Chr3g0468481 RchiOBHm_Chr3g0468491
rosa_laevigata	RLG00000024425
rosa_roxburghii	Rroxscaffold_6G00412720
rosa_rugosa	Rorug03G0095700 Rorug03G0095700 Rorug03G0095700
rosa_samantha	Rh3AG143600 Rh3AG144100 Rh3BG166100 Rh3DG165700
rosa_wichuraiana	Rw3G013600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	39
AccB1I	GGYRCC	1 cut(s)	1060
AccB7I	CCANNNNNTGG	1 cut(s)	742
AccBSI	CCGCTC	1 cut(s)	229
AcoI	YGGCCR	1 cut(s)	712
AcsI	RAATTY	3 cut(s)	542, 683, 1084
AcuI	CTGAAG	1 cut(s)	556
AcyI	GRCGYC	1 cut(s)	36
AfaI	GTAC	3 cut(s)	243, 482, 658
AfiI	CCNNNNNNNGG	6 cut(s)	396, 444, 459, 460, 742, 1291
AgsI	TTSAA	4 cut(s)	100, 813, 1242, 1317
AleI	CACNNNNGTG	1 cut(s)	708
Alw21I	GWGCWC	1 cut(s)	404
Alw26I	GTCTC	2 cut(s)	31, 1029
AlwNI	CAGNNNCTG	3 cut(s)	283, 742, 1358
Ama87I	CYCGRG	1 cut(s)	17
AoxI	GGCC	5 cut(s)	386, 712, 733, 843, 1187
ApaI	GGGCCC	1 cut(s)	390
ApeKI	GCWGC	8 cut(s)	361, 512, 533, 767, 858, 939, 1214, 1217
ApoI	RAATTY	3 cut(s)	542, 683, 1084
Asp700I	GAANNNNTTC	1 cut(s)	1373
AspLEI	GCGC	2 cut(s)	355, 648
AspS9I	GGNCC	5 cut(s)	386, 387, 393, 733, 1187
AsuC2I	CCSGG	3 cut(s)	391, 397, 439
AsuHPI	GGTGA	3 cut(s)	109, 790, 1317
AvaI	CYCGRG	1 cut(s)	17
AvaII	GGWCC	1 cut(s)	393
BaeGI	GKGCMC	1 cut(s)	390
BanI	GGYRCC	1 cut(s)	1060
BanII	GRGCYC	2 cut(s)	390, 404
BbsI	GAAGAC	1 cut(s)	138
Bbv12I	GWGCWC	1 cut(s)	404
BbvI	GCAGC	8 cut(s)	373, 499, 520, 754, 870, 951, 1201, 1229
BccI	CCATC	2 cut(s)	438, 818
BceAI	ACGGC	1 cut(s)	982
BciVI	GTATCC	1 cut(s)	193
BcnI	CCSGG	3 cut(s)	391, 397, 439
BcoDI	GTCTC	2 cut(s)	31, 1029
BfaI	CTAG	4 cut(s)	5, 516, 669, 956
BfmI	CTRYAG	1 cut(s)	1215
BfuI	GTATCC	1 cut(s)	193
BglII	AGATCT	1 cut(s)	7
BmcAI	AGTACT	1 cut(s)	658
Bme1390I	CCNGG	3 cut(s)	391, 397, 439
Bme18I	GGWCC	1 cut(s)	393
BmeT110I	CYCGRG	1 cut(s)	17
BmgT120I	GGNCC	5 cut(s)	386, 387, 393, 733, 1187
BmiI	GGNNCC	6 cut(s)	301, 318, 388, 389, 395, 1062
BmrFI	CCNGG	3 cut(s)	391, 397, 439
BmrI	ACTGGG	2 cut(s)	669, 1146
BmsI	GCATC	1 cut(s)	1229
BmuI	ACTGGG	2 cut(s)	669, 1146
BoxI	GACNNNNGTC	1 cut(s)	292
BpiI	GAAGAC	1 cut(s)	138
BpmI	CTGGAG	1 cut(s)	335
BpuMI	CCSGG	3 cut(s)	391, 397, 439
BsaBI	GATNNNNATC	1 cut(s)	448
BsaHI	GRCGYC	1 cut(s)	36
BsaI	GGTCTC	1 cut(s)	1029
BsaJI	CCNNGG	3 cut(s)	16, 389, 547
BsaWI	WCCGGW	1 cut(s)	296
BsaXI	ACNNNNNCTCC	6 cut(s)	92, 122, 128, 158, 821, 851
Bsc4I	CCNNNNNNNGG	6 cut(s)	396, 444, 459, 460, 742, 1291
Bse118I	RCCGGY	1 cut(s)	125
Bse1I	ACTGG	4 cut(s)	664, 736, 1089, 1152
Bse3DI	GCAATG	2 cut(s)	698, 787
Bse8I	GATNNNNATC	1 cut(s)	448
BseDI	CCNNGG	3 cut(s)	16, 389, 547
BseGI	GGATG	2 cut(s)	598, 1141
BseJI	GATNNNNATC	1 cut(s)	448
BseLI	CCNNNNNNNGG	6 cut(s)	396, 444, 459, 460, 742, 1291
BseMI	GCAATG	2 cut(s)	698, 787
BseMII	CTCAG	3 cut(s)	546, 831, 1047
BseNI	ACTGG	4 cut(s)	664, 736, 1089, 1152
BseRI	GAGGAG	2 cut(s)	94, 97
BseSI	GKGCMC	1 cut(s)	390
BseXI	GCAGC	8 cut(s)	373, 499, 520, 754, 870, 951, 1201, 1229
BseYI	CCCAGC	2 cut(s)	283, 717
Bsh1285I	CGRYCG	4 cut(s)	81, 205, 293, 1383
BshFI	GGCC	5 cut(s)	388, 714, 735, 845, 1189
BshNI	GGYRCC	1 cut(s)	1060
BsiEI	CGRYCG	4 cut(s)	81, 205, 293, 1383
BsiHKAI	GWGCWC	1 cut(s)	404
BsiHKCI	CYCGRG	1 cut(s)	17
BsiSI	CCGG	6 cut(s)	126, 297, 379, 391, 397, 438
BsiWI	CGTACG	1 cut(s)	241
BslFI	GGGAC	2 cut(s)	300, 379
BslI	CCNNNNNNNGG	6 cut(s)	396, 444, 459, 460, 742, 1291
BsmAI	GTCTC	2 cut(s)	31, 1029
BsmBI	CGTCTC	1 cut(s)	31
BsmFI	GGGAC	2 cut(s)	300, 379
BsmI	GAATGC	2 cut(s)	969, 1000
BsnI	GGCC	5 cut(s)	388, 714, 735, 845, 1189
Bso31I	GGTCTC	1 cut(s)	1029
BsoBI	CYCGRG	1 cut(s)	17
Bsp120I	GGGCCC	1 cut(s)	386
Bsp1286I	GDGCHC	2 cut(s)	390, 404
Bsp143I	GATC	7 cut(s)	7, 78, 290, 526, 537, 874, 1380
BspANI	GGCC	5 cut(s)	388, 714, 735, 845, 1189
BspCNI	CTCAG	3 cut(s)	547, 832, 1048
BspLI	GGNNCC	6 cut(s)	301, 318, 388, 389, 395, 1062
BspMAI	CTGCAG	1 cut(s)	1219
BspQI	GCTCTTC	2 cut(s)	253, 368
BspT107I	GGYRCC	1 cut(s)	1060
BspTNI	GGTCTC	1 cut(s)	1029
BsrBI	CCGCTC	1 cut(s)	229
BsrDI	GCAATG	2 cut(s)	698, 787
BsrFI	RCCGGY	1 cut(s)	125
BsrI	ACTGG	4 cut(s)	664, 736, 1089, 1152
BssAI	RCCGGY	1 cut(s)	125
BssECI	CCNNGG	3 cut(s)	16, 389, 547
BssMI	GATC	7 cut(s)	7, 78, 290, 526, 537, 874, 1380
BssNI	GRCGYC	1 cut(s)	36
Bst4CI	ACNGT	1 cut(s)	203
Bst6I	CTCTTC	5 cut(s)	253, 368, 781, 1121, 1211
BstACI	GRCGYC	1 cut(s)	36
BstAPI	GCANNNNNTGC	2 cut(s)	643, 995
BstC8I	GCNNGC	4 cut(s)	127, 231, 404, 1187
BstDEI	CTNAG	4 cut(s)	270, 555, 840, 1056
BstDSI	CCRYGG	1 cut(s)	547
BstF5I	GGATG	2 cut(s)	598, 1141
BstHHI	GCGC	2 cut(s)	355, 648
BstKTI	GATC	7 cut(s)	10, 81, 293, 529, 540, 877, 1383
BstMAI	GTCTC	2 cut(s)	31, 1029
BstMBI	GATC	7 cut(s)	7, 78, 290, 526, 537, 874, 1380
BstMCI	CGRYCG	4 cut(s)	81, 205, 293, 1383
BstMWI	GCNNNNNNNGC	8 cut(s)	93, 226, 361, 509, 518, 643, 966, 995
BstPAI	GACNNNNGTC	1 cut(s)	292
BstSCI	CCNGG	3 cut(s)	389, 395, 437
BstSFI	CTRYAG	1 cut(s)	1215
BstSLI	GKGCMC	1 cut(s)	390
BstV1I	GCAGC	8 cut(s)	373, 499, 520, 754, 870, 951, 1201, 1229
BstV2I	GAAGAC	1 cut(s)	138
BstX2I	RGATCY	1 cut(s)	7
BstXI	CCANNNNNNTGG	2 cut(s)	659, 1108
BstYI	RGATCY	1 cut(s)	7
BsuI	GTATCC	1 cut(s)	193
BsuRI	GGCC	5 cut(s)	388, 714, 735, 845, 1189
BtgI	CCRYGG	1 cut(s)	547
BtsCI	GGATG	2 cut(s)	598, 1141
BtsI	GCAGTG	2 cut(s)	284, 498
BtsIMutI	CAGTG	4 cut(s)	284, 498, 580, 586
Cac8I	GCNNGC	4 cut(s)	127, 231, 404, 1187
CaiI	CAGNNNCTG	3 cut(s)	283, 742, 1358
CfoI	GCGC	2 cut(s)	355, 648
Cfr10I	RCCGGY	1 cut(s)	125
Cfr13I	GGNCC	5 cut(s)	386, 387, 393, 733, 1187
CseI	GACGC	1 cut(s)	1041
Csp6I	GTAC	3 cut(s)	242, 481, 657
CspCI	CAANNNNNGTGG	2 cut(s)	529, 564
CviAII	CATG	3 cut(s)	1037, 1081, 1198
CviQI	GTAC	3 cut(s)	242, 481, 657
DdeI	CTNAG	4 cut(s)	270, 555, 840, 1056
DpnI	GATC	7 cut(s)	9, 80, 292, 528, 539, 876, 1382
DpnII	GATC	7 cut(s)	7, 78, 290, 526, 537, 874, 1380
EaeI	YGGCCR	1 cut(s)	712
Eam1104I	CTCTTC	5 cut(s)	253, 368, 781, 1121, 1211
EarI	CTCTTC	5 cut(s)	253, 368, 781, 1121, 1211
EciI	GGCGGA	1 cut(s)	1292
Ecl136II	GAGCTC	1 cut(s)	402
Eco24I	GRGCYC	2 cut(s)	390, 404
Eco31I	GGTCTC	1 cut(s)	1029
Eco47I	GGWCC	1 cut(s)	393
Eco53kI	GAGCTC	1 cut(s)	402
Eco57I	CTGAAG	1 cut(s)	556
Eco88I	CYCGRG	1 cut(s)	17
EcoICRI	GAGCTC	1 cut(s)	402
EcoO109I	RGGNCCY	2 cut(s)	386, 387
EcoRI	GAATTC	1 cut(s)	1084
EcoT38I	GRGCYC	2 cut(s)	390, 404
Esp3I	CGTCTC	1 cut(s)	31
FaeI	CATG	3 cut(s)	1040, 1084, 1201
FaqI	GGGAC	2 cut(s)	300, 379
FatI	CATG	3 cut(s)	1036, 1080, 1197
FauI	CCCGC	2 cut(s)	461, 1178
FauNDI	CATATG	3 cut(s)	757, 820, 1107
FokI	GGATG	2 cut(s)	605, 1148
FriOI	GRGCYC	2 cut(s)	390, 404
FspBI	CTAG	4 cut(s)	5, 516, 669, 956
GlaI	GCGC	2 cut(s)	354, 647
GsaI	CCCAGC	2 cut(s)	287, 721
GsuI	CTGGAG	1 cut(s)	335
HaeIII	GGCC	5 cut(s)	388, 714, 735, 845, 1189
HapII	CCGG	6 cut(s)	126, 297, 379, 391, 397, 438
HgaI	GACGC	1 cut(s)	1041
HhaI	GCGC	2 cut(s)	355, 648
Hin1I	GRCGYC	1 cut(s)	36
Hin1II	CATG	3 cut(s)	1040, 1084, 1201
Hin6I	GCGC	2 cut(s)	353, 646
HinP1I	GCGC	2 cut(s)	353, 646
HincII	GTYRAC	1 cut(s)	1141
HindII	GTYRAC	1 cut(s)	1141
HindIII	AAGCTT	2 cut(s)	59, 94
HinfI	GANTC	6 cut(s)	47, 449, 693, 809, 1230, 1297
HpaI	GTTAAC	1 cut(s)	1141
HpaII	CCGG	6 cut(s)	126, 297, 379, 391, 397, 438
HphI	GGTGA	3 cut(s)	109, 790, 1317
Hpy166II	GTNNAC	3 cut(s)	481, 1141, 1377
Hpy188I	TCNGA	8 cut(s)	91, 171, 207, 841, 879, 910, 1057, 1385
Hpy188III	TCNNGA	6 cut(s)	44, 303, 669, 872, 1227, 1378
Hpy8I	GTNNAC	3 cut(s)	481, 1141, 1377
Hpy99I	CGWCG	9 cut(s)	38, 41, 140, 179, 182, 203, 259, 262, 265
HpyAV	CCTTC	2 cut(s)	745, 1245
HpyCH4III	ACNGT	1 cut(s)	203
HpyCH4IV	ACGT	4 cut(s)	36, 180, 422, 1319
HpyCH4V	TGCA	5 cut(s)	637, 703, 780, 1217, 1352
HpyF10VI	GCNNNNNNNGC	8 cut(s)	93, 226, 361, 509, 518, 643, 966, 995
HpyF3I	CTNAG	4 cut(s)	270, 555, 840, 1056
HpySE526I	ACGT	4 cut(s)	36, 180, 422, 1319
Hsp92I	GRCGYC	1 cut(s)	36
Hsp92II	CATG	3 cut(s)	1040, 1084, 1201
HspAI	GCGC	2 cut(s)	353, 646
KroI	GCCGGC	1 cut(s)	125
KroNI	GCCGGC	1 cut(s)	127
KspAI	GTTAAC	1 cut(s)	1141
Kzo9I	GATC	7 cut(s)	7, 78, 290, 526, 537, 874, 1380
LguI	GCTCTTC	2 cut(s)	253, 368
LmnI	GCTCC	8 cut(s)	92, 172, 310, 316, 337, 340, 399, 898
Lsp1109I	GCAGC	8 cut(s)	373, 499, 520, 754, 870, 951, 1201, 1229
LweI	GCATC	1 cut(s)	1229
MaeI	CTAG	4 cut(s)	5, 516, 669, 956
MaeII	ACGT	4 cut(s)	36, 180, 422, 1319
MaeIII	GTNAC	5 cut(s)	418, 694, 796, 962, 1267
MalI	GATC	7 cut(s)	9, 80, 292, 528, 539, 876, 1382
MbiI	CCGCTC	1 cut(s)	229
MboI	GATC	7 cut(s)	7, 78, 290, 526, 537, 874, 1380
MflI	RGATCY	1 cut(s)	7
MhlI	GDGCHC	2 cut(s)	390, 404
MluCI	AATT	8 cut(s)	542, 613, 629, 683, 888, 931, 1084, 1310
MlyI	GAGTC	1 cut(s)	702
MmeI	TCCRAC	2 cut(s)	135, 185
MreI	CGCCGGCG	1 cut(s)	125
MroNI	GCCGGC	1 cut(s)	125
MroXI	GAANNNNTTC	1 cut(s)	1373
MseI	TTAA	4 cut(s)	567, 600, 833, 1140
MslI	CAYNNNNRTG	2 cut(s)	708, 1106
MspA1I	CMGCKG	2 cut(s)	717, 1265
MspI	CCGG	6 cut(s)	126, 297, 379, 391, 397, 438
MspR9I	CCNGG	3 cut(s)	391, 397, 439
Mva1269I	GAATGC	2 cut(s)	969, 1000
MwoI	GCNNNNNNNGC	8 cut(s)	93, 226, 361, 509, 518, 643, 966, 995
NaeI	GCCGGC	1 cut(s)	127
NciI	CCSGG	3 cut(s)	391, 397, 439
NdeI	CATATG	3 cut(s)	757, 820, 1107
NdeII	GATC	7 cut(s)	7, 78, 290, 526, 537, 874, 1380
NgoMIV	GCCGGC	1 cut(s)	125
NlaIII	CATG	3 cut(s)	1040, 1084, 1201
NlaIV	GGNNCC	6 cut(s)	301, 318, 388, 389, 395, 1062
NmuCI	GTSAC	4 cut(s)	694, 796, 962, 1267
OliI	CACNNNNGTG	1 cut(s)	708
PciSI	GCTCTTC	2 cut(s)	253, 368
PcsI	WCGNNNNNNNCGW	4 cut(s)	30, 42, 87, 237
PctI	GAATGC	2 cut(s)	969, 1000
PdiI	GCCGGC	1 cut(s)	127
PdmI	GAANNNNTTC	1 cut(s)	1373
PfeI	GAWTC	5 cut(s)	47, 449, 809, 1230, 1297
Pfl23II	CGTACG	1 cut(s)	241
PflMI	CCANNNNNTGG	1 cut(s)	742
PfoI	TCCNGGA	1 cut(s)	395
Ple19I	CGATCG	3 cut(s)	81, 293, 1383
PleI	GAGTC	1 cut(s)	701
PpsI	GAGTC	1 cut(s)	701
PshAI	GACNNNNGTC	1 cut(s)	292
Psp124BI	GAGCTC	1 cut(s)	404
PspFI	CCCAGC	2 cut(s)	283, 717
PspLI	CGTACG	1 cut(s)	241
PspN4I	GGNNCC	6 cut(s)	301, 318, 388, 389, 395, 1062
PspOMI	GGGCCC	1 cut(s)	386
PspPI	GGNCC	5 cut(s)	386, 387, 393, 733, 1187
PstI	CTGCAG	1 cut(s)	1219
PstNI	CAGNNNCTG	3 cut(s)	283, 742, 1358
PsuI	RGATCY	1 cut(s)	7
PvuI	CGATCG	3 cut(s)	81, 293, 1383
PvuII	CAGCTG	1 cut(s)	1265
RsaI	GTAC	3 cut(s)	243, 482, 658
RsaNI	GTAC	3 cut(s)	242, 481, 657
RseI	CAYNNNNRTG	2 cut(s)	708, 1106
SacI	GAGCTC	1 cut(s)	404
SapI	GCTCTTC	2 cut(s)	253, 368
SaqAI	TTAA	4 cut(s)	567, 600, 833, 1140
Sau3AI	GATC	7 cut(s)	7, 78, 290, 526, 537, 874, 1380
Sau96I	GGNCC	5 cut(s)	386, 387, 393, 733, 1187
ScaI	AGTACT	1 cut(s)	658
SchI	GAGTC	1 cut(s)	702
ScrFI	CCNGG	3 cut(s)	391, 397, 439
SduI	GDGCHC	2 cut(s)	390, 404
SfaNI	GCATC	1 cut(s)	1229
SfcI	CTRYAG	1 cut(s)	1215
SgrAI	CRCCGGYG	1 cut(s)	125
SinI	GGWCC	1 cut(s)	393
SmiMI	CAYNNNNRTG	2 cut(s)	708, 1106
Sse9I	AATT	8 cut(s)	542, 613, 629, 683, 888, 931, 1084, 1310
SspMI	CTAG	4 cut(s)	5, 516, 669, 956
SstI	GAGCTC	1 cut(s)	404
StyD4I	CCNGG	3 cut(s)	389, 395, 437
TaaI	ACNGT	1 cut(s)	203
TaiI	ACGT	4 cut(s)	39, 183, 425, 1322
TaqI	TCGA	5 cut(s)	81, 430, 529, 680, 807
TasI	AATT	8 cut(s)	542, 613, 629, 683, 888, 931, 1084, 1310
TatI	WGTACW	2 cut(s)	480, 656
TauI	GCSGC	2 cut(s)	651, 717
TfiI	GAWTC	5 cut(s)	47, 449, 809, 1230, 1297
Tru1I	TTAA	4 cut(s)	567, 600, 833, 1140
Tru9I	TTAA	4 cut(s)	567, 600, 833, 1140
TscAI	CASTG	4 cut(s)	284, 505, 580, 586
TseFI	GTSAC	4 cut(s)	694, 796, 962, 1267
TseI	GCWGC	8 cut(s)	361, 512, 533, 767, 858, 939, 1214, 1217
Tsp45I	GTSAC	4 cut(s)	694, 796, 962, 1267
TspDTI	ATGAA	4 cut(s)	1094, 1097, 1242, 1268
TspGWI	ACGGA	2 cut(s)	229, 536
TspRI	CASTG	4 cut(s)	284, 505, 580, 586
Van91I	CCANNNNNTGG	1 cut(s)	742
VpaK11BI	GGWCC	1 cut(s)	393
XapI	RAATTY	3 cut(s)	542, 683, 1084
XbaI	TCTAGA	1 cut(s)	668
XcmI	CCANNNNNNNNNTGG	2 cut(s)	310, 1178
XmnI	GAANNNNTTC	1 cut(s)	1373
XspI	CTAG	4 cut(s)	5, 516, 669, 956
ZraI	GACGTC	1 cut(s)	37
ZrmI	AGTACT	1 cut(s)	658

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.