pycom12g13900

Belongs to the DHHC palmitoyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0007849
Physical Location & Seq
Reverse (-)
16370276 .. 16375104
4829 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 999 bp
ATGGACATGATTTGCAAAACCCGGTCGCCGAGTCACCAACATCCAAATCCTCGCATCCTGCCAGCTGAAACGACACACCCCTTCGCCCCGGGAGACGCCGTCGTTTTGACGCCGGTGCCTCCGCCACCCCGTCCGCCACCCCCGGAGAACGTTCCAGAAACAATGACGCGAAGCCTCGGCTTCTCTCTACCCGTGACCGTCGTCGTTTTGGCAATCGCATACATTTACTTCTCCACAGTCTTCATTTTCATAGACCGCTGGTTCGGTCTCATGTCGTCGCCAGGTTTGATAAACGCCGTTGTTTTCACCGGCGTGGCCGTCATGTGCGTATTCAATTACTTCGTCTCCGTCTTCAGGGATCCGGGTCGGGTTCCATCCATGTACATGCCCGACGTCGAAGATTCGGGTAACCCTATCCACGAGATCAAGCGCAAGGGAGGGGATTTAAGATATTGCCAAAAGTGTTCTCACTATAAGCCAGCTCGTGCACATCATTGTCGTGTATGTAAACGATGTGTATTGCGAATGGATCATCATTGCATATGGATTAATAATTGCGTCGGCCATGCAAACTATAAGGTCTTCTTCATCTTTGTTGTTTATGCTGCAATAGCATGCCTCTATTCCCTGGTTTTGCTCTTGGGTAGCCTAACTTATGATCCCGAAAAAGATGACCAGGAAACTGGCGACTCTTTTCGAACTGCATATGTCATTTCTGGGCTGTTGCTAGTTCCCTTATGTGTGGCACTGAGTGTTCTTTTAGGTTGGCATATCTACCTCATTTTGCAAAACAAGACCACAATTGAGTACTATGAAGGAGTGAGAGCCATGTGGCTTGCAGAGAAAGGAGGGCAAATCTATTCCCATCCATATGATCTCGGTGCCTATGAAAATTTAACAACGGTACTGGGTCCAAATATCTGCTGTTGGGCACTCCCCACATCGGGACACATAGGATCCGGACTTCACTTTCGTACAGCTTATGATTACCCTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DHHC

Protein Analysis

333

Amino Acids

37.19

Weight (kDa)

7.57

Isoelectric Point (pI)

54.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHHC PF01529 148 - 272 6.1e-41 DHHC palmitoyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 396
AccB1I GGYRCC 2 cut(s) 115, 881
AccII CGCG 1 cut(s) 169
AccIII TCCGGA 1 cut(s) 959
AciI CCGC 3 cut(s) 122, 134, 256
AclI AACGTT 1 cut(s) 150
AclWI GGATC 6 cut(s) 353, 366, 537, 653, 951, 964
AcoI YGGCCR 2 cut(s) 315, 562
AcsI RAATTY 1 cut(s) 892
AcuI CTGAAG 1 cut(s) 337
AcyI GRCGYC 3 cut(s) 96, 110, 393
AdeI CACNNNGTG 1 cut(s) 752
AfaI GTAC 4 cut(s) 383, 809, 906, 976
AfiI CCNNNNNNNGG 3 cut(s) 354, 943, 944
AgsI TTSAA 1 cut(s) 334
AjnI CCWGG 3 cut(s) 280, 627, 675
AleI CACNNNNGTG 1 cut(s) 311
AluBI AGCT 3 cut(s) 65, 482, 980
AluI AGCT 3 cut(s) 65, 482, 980
Alw21I GWGCWC 1 cut(s) 490
Alw26I GTCTC 3 cut(s) 87, 272, 349
Alw44I GTGCAC 1 cut(s) 486
AlwI GGATC 6 cut(s) 353, 366, 537, 653, 951, 964
Ama87I CYCGRG 1 cut(s) 88
Aor13HI TCCGGA 1 cut(s) 959
AoxI GGCC 2 cut(s) 315, 562
ApaLI GTGCAC 1 cut(s) 486
ApeKI GCWGC 1 cut(s) 605
ApoI RAATTY 1 cut(s) 892
ArsI GACNNNNNNTTYG 4 cut(s) 245, 277, 954, 986
AseI ATTAAT 1 cut(s) 549
AspLEI GCGC 1 cut(s) 432
AspS9I GGNCC 1 cut(s) 911
AsuC2I CCSGG 5 cut(s) 22, 89, 90, 143, 363
AsuHPI GGTGA 2 cut(s) 26, 298
AsuII TTCGAA 1 cut(s) 697
AvaI CYCGRG 1 cut(s) 88
AvaII GGWCC 1 cut(s) 911
BaeGI GKGCMC 2 cut(s) 490, 934
BamHI GGATCC 2 cut(s) 358, 956
BanI GGYRCC 2 cut(s) 115, 881
BauI CACGAG 2 cut(s) 419, 483
BbsI GAAGAC 3 cut(s) 232, 343, 574
Bbv12I GWGCWC 1 cut(s) 490
BbvI GCAGC 1 cut(s) 592
BccI CCATC 2 cut(s) 382, 873
BceAI ACGGC 3 cut(s) 83, 281, 302
BciT130I CCWGG 3 cut(s) 282, 629, 677
BcnI CCSGG 5 cut(s) 22, 89, 90, 143, 363
BcoDI GTCTC 3 cut(s) 87, 272, 349
BfaI CTAG 1 cut(s) 728
BisI GCNGC 1 cut(s) 606
BlsI GCNGC 1 cut(s) 607
BmcAI AGTACT 1 cut(s) 809
Bme1390I CCNGG 8 cut(s) 22, 89, 90, 143, 282, 363, 629, 677
Bme18I GGWCC 1 cut(s) 911
BmeT110I CYCGRG 1 cut(s) 88
BmgT120I GGNCC 1 cut(s) 911
BmiI GGNNCC 6 cut(s) 117, 360, 372, 883, 912, 958
BmrFI CCNGG 8 cut(s) 22, 89, 90, 143, 282, 363, 629, 677
BmrI ACTGGG 1 cut(s) 917
BmsI GCATC 1 cut(s) 63
BmuI ACTGGG 1 cut(s) 917
BoxI GACNNNNGTC 1 cut(s) 200
BpiI GAAGAC 3 cut(s) 232, 343, 574
Bpu14I TTCGAA 1 cut(s) 697
BpuMI CCSGG 5 cut(s) 22, 89, 90, 143, 363
BsaHI GRCGYC 3 cut(s) 96, 110, 393
BsaI GGTCTC 1 cut(s) 272
BsaJI CCNNGG 5 cut(s) 87, 88, 141, 175, 627
BsaWI WCCGGW 1 cut(s) 959
BsaXI ACNNNNNCTCC 4 cut(s) 84, 114, 329, 359
Bsc4I CCNNNNNNNGG 3 cut(s) 354, 943, 944
Bse118I RCCGGY 2 cut(s) 112, 308
Bse1I ACTGG 2 cut(s) 688, 912
Bse3DI GCAATG 1 cut(s) 535
BseAI TCCGGA 1 cut(s) 959
BseBI CCWGG 3 cut(s) 282, 629, 677
BseDI CCNNGG 5 cut(s) 87, 88, 141, 175, 627
BseGI GGATG 4 cut(s) 40, 54, 374, 865
BseLI CCNNNNNNNGG 3 cut(s) 354, 943, 944
BseMI GCAATG 1 cut(s) 535
BseMII CTCAG 1 cut(s) 740
BseNI ACTGG 2 cut(s) 688, 912
BseSI GKGCMC 2 cut(s) 490, 934
BseXI GCAGC 1 cut(s) 592
Bsh1236I CGCG 1 cut(s) 169
Bsh1285I CGRYCG 1 cut(s) 26
BshFI GGCC 2 cut(s) 317, 564
BshNI GGYRCC 2 cut(s) 115, 881
BsiEI CGRYCG 1 cut(s) 26
BsiHKAI GWGCWC 1 cut(s) 490
BsiHKCI CYCGRG 1 cut(s) 88
BsiSI CCGG 7 cut(s) 22, 89, 113, 143, 309, 362, 960
BslFI GGGAC 1 cut(s) 960
BslI CCNNNNNNNGG 3 cut(s) 354, 943, 944
BsmAI GTCTC 3 cut(s) 87, 272, 349
BsmBI CGTCTC 2 cut(s) 87, 349
BsmFI GGGAC 1 cut(s) 960
BsnI GGCC 2 cut(s) 317, 564
Bso31I GGTCTC 1 cut(s) 272
BsoBI CYCGRG 1 cut(s) 88
Bsp119I TTCGAA 1 cut(s) 697
Bsp1286I GDGCHC 2 cut(s) 490, 934
Bsp13I TCCGGA 1 cut(s) 959
Bsp1407I TGTACA 1 cut(s) 381
Bsp143I GATC 6 cut(s) 358, 423, 529, 658, 874, 956
BspACI CCGC 3 cut(s) 122, 134, 256
BspANI GGCC 2 cut(s) 317, 564
BspCNI CTCAG 1 cut(s) 741
BspEI TCCGGA 1 cut(s) 959
BspFNI CGCG 1 cut(s) 169
BspLI GGNNCC 6 cut(s) 117, 360, 372, 883, 912, 958
BspPI GGATC 6 cut(s) 353, 366, 537, 653, 951, 964
BspT104I TTCGAA 1 cut(s) 697
BspT107I GGYRCC 2 cut(s) 115, 881
BspTNI GGTCTC 1 cut(s) 272
BsrDI GCAATG 1 cut(s) 535
BsrFI RCCGGY 2 cut(s) 112, 308
BsrGI TGTACA 1 cut(s) 381
BsrI ACTGG 2 cut(s) 688, 912
BssAI RCCGGY 2 cut(s) 112, 308
BssECI CCNNGG 5 cut(s) 87, 88, 141, 175, 627
BssMI GATC 6 cut(s) 358, 423, 529, 658, 874, 956
BssNI GRCGYC 3 cut(s) 96, 110, 393
BssSI CACGAG 2 cut(s) 419, 483
Bst2BI CACGAG 2 cut(s) 419, 483
Bst2UI CCWGG 3 cut(s) 282, 629, 677
Bst4CI ACNGT 3 cut(s) 199, 238, 904
BstACI GRCGYC 3 cut(s) 96, 110, 393
BstAUI TGTACA 1 cut(s) 381
BstBI TTCGAA 1 cut(s) 697
BstC8I GCNNGC 4 cut(s) 63, 480, 616, 837
BstDEI CTNAG 1 cut(s) 749
BstEII GGTNACC 1 cut(s) 407
BstF5I GGATG 4 cut(s) 40, 54, 374, 865
BstFNI CGCG 1 cut(s) 169
BstHHI GCGC 1 cut(s) 432
BstKTI GATC 6 cut(s) 361, 426, 532, 661, 877, 959
BstMAI GTCTC 3 cut(s) 87, 272, 349
BstMBI GATC 6 cut(s) 358, 423, 529, 658, 874, 956
BstMCI CGRYCG 1 cut(s) 26
BstMWI GCNNNNNNNGC 1 cut(s) 611
BstNI CCWGG 3 cut(s) 282, 629, 677
BstNSI RCATGY 2 cut(s) 388, 618
BstPAI GACNNNNGTC 1 cut(s) 200
BstPI GGTNACC 1 cut(s) 407
BstSCI CCNGG 8 cut(s) 20, 87, 88, 141, 280, 361, 627, 675
BstSLI GKGCMC 2 cut(s) 490, 934
BstUI CGCG 1 cut(s) 169
BstV1I GCAGC 1 cut(s) 592
BstV2I GAAGAC 3 cut(s) 232, 343, 574
BstX2I RGATCY 2 cut(s) 358, 956
BstXI CCANNNNNNTGG 1 cut(s) 683
BstYI RGATCY 2 cut(s) 358, 956
BsuRI GGCC 2 cut(s) 317, 564
BtsCI GGATG 4 cut(s) 40, 54, 374, 865
BtsIMutI CAGTG 1 cut(s) 746
Cac8I GCNNGC 4 cut(s) 63, 480, 616, 837
CfoI GCGC 1 cut(s) 432
Cfr10I RCCGGY 2 cut(s) 112, 308
Cfr13I GGNCC 1 cut(s) 911
Cfr9I CCCGGG 1 cut(s) 88
CseI GACGC 4 cut(s) 104, 118, 175, 547
Csp6I GTAC 4 cut(s) 382, 808, 905, 975
CviAII CATG 8 cut(s) 7, 271, 322, 379, 385, 566, 615, 829
CviQI GTAC 4 cut(s) 382, 808, 905, 975
DdeI CTNAG 1 cut(s) 749
DpnI GATC 6 cut(s) 360, 425, 531, 660, 876, 958
DpnII GATC 6 cut(s) 358, 423, 529, 658, 874, 956
DraIII CACNNNGTG 1 cut(s) 752
EaeI YGGCCR 2 cut(s) 315, 562
EciI GGCGGA 2 cut(s) 111, 123
Eco31I GGTCTC 1 cut(s) 272
Eco47I GGWCC 1 cut(s) 911
Eco57I CTGAAG 1 cut(s) 337
Eco88I CYCGRG 1 cut(s) 88
Eco91I GGTNACC 1 cut(s) 407
EcoO65I GGTNACC 1 cut(s) 407
EcoRII CCWGG 3 cut(s) 280, 627, 675
Esp3I CGTCTC 2 cut(s) 87, 349
FaeI CATG 8 cut(s) 10, 274, 325, 382, 388, 569, 618, 832
FalI AAGNNNNNCTT 2 cut(s) 569, 601
FaqI GGGAC 1 cut(s) 960
FatI CATG 8 cut(s) 6, 270, 321, 378, 384, 565, 614, 828
FauNDI CATATG 3 cut(s) 542, 706, 871
Fnu4HI GCNGC 1 cut(s) 606
FokI GGATG 4 cut(s) 27, 41, 361, 852
Fsp4HI GCNGC 1 cut(s) 606
FspBI CTAG 1 cut(s) 728
GlaI GCGC 1 cut(s) 431
GluI GCNGC 1 cut(s) 606
HaeIII GGCC 2 cut(s) 317, 564
HapII CCGG 7 cut(s) 22, 89, 113, 143, 309, 362, 960
HgaI GACGC 4 cut(s) 104, 118, 175, 547
HhaI GCGC 1 cut(s) 432
Hin1I GRCGYC 3 cut(s) 96, 110, 393
Hin1II CATG 8 cut(s) 10, 274, 325, 382, 388, 569, 618, 832
Hin6I GCGC 1 cut(s) 430
HinP1I GCGC 1 cut(s) 430
HinfI GANTC 3 cut(s) 31, 401, 689
HpaII CCGG 7 cut(s) 22, 89, 113, 143, 309, 362, 960
HphI GGTGA 2 cut(s) 26, 298
Hpy166II GTNNAC 2 cut(s) 488, 509
Hpy188III TCNNGA 5 cut(s) 155, 662, 945, 960, 996
Hpy8I GTNNAC 2 cut(s) 488, 509
Hpy99I CGWCG 7 cut(s) 104, 203, 206, 280, 395, 398, 563
HpyAV CCTTC 2 cut(s) 91, 809
HpyCH4III ACNGT 3 cut(s) 199, 238, 904
HpyCH4IV ACGT 2 cut(s) 150, 393
HpyCH4V TGCA 8 cut(s) 15, 488, 540, 569, 608, 704, 787, 839
HpyF10VI GCNNNNNNNGC 1 cut(s) 611
HpyF3I CTNAG 1 cut(s) 749
HpySE526I ACGT 2 cut(s) 150, 393
Hsp92I GRCGYC 3 cut(s) 96, 110, 393
Hsp92II CATG 8 cut(s) 10, 274, 325, 382, 388, 569, 618, 832
HspAI GCGC 1 cut(s) 430
Kpn2I TCCGGA 1 cut(s) 959
Kzo9I GATC 6 cut(s) 358, 423, 529, 658, 874, 956
Lsp1109I GCAGC 1 cut(s) 592
LweI GCATC 1 cut(s) 63
MaeI CTAG 1 cut(s) 728
MaeII ACGT 2 cut(s) 150, 393
MaeIII GTNAC 3 cut(s) 32, 193, 407
MalI GATC 6 cut(s) 360, 425, 531, 660, 876, 958
MboI GATC 6 cut(s) 358, 423, 529, 658, 874, 956
MboII GAAGA 5 cut(s) 232, 343, 410, 574, 577
MfeI CAATTG 1 cut(s) 801
MflI RGATCY 2 cut(s) 358, 956
MhlI GDGCHC 2 cut(s) 490, 934
MluCI AATT 4 cut(s) 334, 553, 801, 892
MlyI GAGTC 2 cut(s) 40, 683
MnlI CCTC 7 cut(s) 60, 129, 185, 431, 629, 788, 842
MroI TCCGGA 1 cut(s) 959
MseI TTAA 3 cut(s) 446, 549, 896
MslI CAYNNNNRTG 4 cut(s) 311, 383, 498, 870
MspA1I CMGCKG 2 cut(s) 65, 258
MspI CCGG 7 cut(s) 22, 89, 113, 143, 309, 362, 960
MspR9I CCNGG 8 cut(s) 22, 89, 90, 143, 282, 363, 629, 677
MunI CAATTG 1 cut(s) 801
MvaI CCWGG 3 cut(s) 282, 629, 677
MvnI CGCG 1 cut(s) 169
MwoI GCNNNNNNNGC 1 cut(s) 611
NciI CCSGG 5 cut(s) 22, 89, 90, 143, 363
NdeI CATATG 3 cut(s) 542, 706, 871
NdeII GATC 6 cut(s) 358, 423, 529, 658, 874, 956
NlaIII CATG 8 cut(s) 10, 274, 325, 382, 388, 569, 618, 832
NlaIV GGNNCC 6 cut(s) 117, 360, 372, 883, 912, 958
NmeAIII GCCGAG 2 cut(s) 54, 156
NmuCI GTSAC 2 cut(s) 32, 193
NspI RCATGY 2 cut(s) 388, 618
NspV TTCGAA 1 cut(s) 697
OliI CACNNNNGTG 1 cut(s) 311
PaeI GCATGC 1 cut(s) 618
PfeI GAWTC 1 cut(s) 401
PflFI GACNNNGTC 1 cut(s) 98
PkrI GCNGC 1 cut(s) 607
PleI GAGTC 2 cut(s) 39, 683
PpsI GAGTC 2 cut(s) 39, 683
PshAI GACNNNNGTC 1 cut(s) 200
PshBI ATTAAT 1 cut(s) 549
Psp1406I AACGTT 1 cut(s) 150
Psp6I CCWGG 3 cut(s) 280, 627, 675
PspEI GGTNACC 1 cut(s) 407
PspGI CCWGG 3 cut(s) 280, 627, 675
PspN4I GGNNCC 6 cut(s) 117, 360, 372, 883, 912, 958
PspPI GGNCC 1 cut(s) 911
PsuI RGATCY 2 cut(s) 358, 956
PsyI GACNNNGTC 1 cut(s) 98
PvuII CAGCTG 1 cut(s) 65
RsaI GTAC 4 cut(s) 383, 809, 906, 976
RsaNI GTAC 4 cut(s) 382, 808, 905, 975
RseI CAYNNNNRTG 4 cut(s) 311, 383, 498, 870
SaqAI TTAA 3 cut(s) 446, 549, 896
SatI GCNGC 1 cut(s) 606
Sau3AI GATC 6 cut(s) 358, 423, 529, 658, 874, 956
Sau96I GGNCC 1 cut(s) 911
ScaI AGTACT 1 cut(s) 809
SchI GAGTC 2 cut(s) 40, 683
ScrFI CCNGG 8 cut(s) 22, 89, 90, 143, 282, 363, 629, 677
SduI GDGCHC 2 cut(s) 490, 934
SetI ASST 9 cut(s) 67, 153, 286, 396, 484, 582, 766, 780, 982
SfaNI GCATC 1 cut(s) 63
SfuI TTCGAA 1 cut(s) 697
SgrAI CRCCGGYG 2 cut(s) 112, 308
SinI GGWCC 1 cut(s) 911
SmaI CCCGGG 1 cut(s) 90
SmiMI CAYNNNNRTG 4 cut(s) 311, 383, 498, 870
SphI GCATGC 1 cut(s) 618
Sse9I AATT 4 cut(s) 334, 553, 801, 892
SsiI CCGC 3 cut(s) 122, 134, 256
SspMI CTAG 1 cut(s) 728
StyD4I CCNGG 8 cut(s) 20, 87, 88, 141, 280, 361, 627, 675
TaaI ACNGT 3 cut(s) 199, 238, 904
TaiI ACGT 2 cut(s) 153, 396
TaqI TCGA 2 cut(s) 396, 697
TaqII GACCGA 1 cut(s) 254
TasI AATT 4 cut(s) 334, 553, 801, 892
TatI WGTACW 2 cut(s) 381, 807
TfiI GAWTC 1 cut(s) 401
Tru1I TTAA 3 cut(s) 446, 549, 896
Tru9I TTAA 3 cut(s) 446, 549, 896
TscAI CASTG 1 cut(s) 753
TseFI GTSAC 2 cut(s) 32, 193
TseI GCWGC 1 cut(s) 605
Tsp45I GTSAC 2 cut(s) 32, 193
TspDTI ATGAA 5 cut(s) 232, 238, 577, 828, 903
TspGWI ACGGA 1 cut(s) 337
TspMI CCCGGG 1 cut(s) 88
TspRI CASTG 1 cut(s) 753
Tth111I GACNNNGTC 1 cut(s) 98
VneI GTGCAC 1 cut(s) 486
VpaK11BI GGWCC 1 cut(s) 911
VspI ATTAAT 1 cut(s) 549
XapI RAATTY 1 cut(s) 892
XceI RCATGY 2 cut(s) 388, 618
XmaI CCCGGG 1 cut(s) 88
XspI CTAG 1 cut(s) 728
ZraI GACGTC 1 cut(s) 394
ZrmI AGTACT 1 cut(s) 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.