Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0004515

Physical Location & Seq

Genomic Coordinates Forward (+)

24659067 .. 24666863

Gene Structure 7797 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g24300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2961 bp

ATGAGCGGTTTGGTGATGGCGATACTTCTCAAATTGGTTTGGAATTTGATGAGGACCTGTTTTTTGGCAAGGTTTCAGCTCAAGGGAATGATGGAATTTCAGATGATCGATCCTCAGACATTGGGCCAATCAGTAACACCTTTGGAAAAGCATGATATGTATGAGGGGATACCTGGAACCTCAGAAACCATGCAAATGAATGGGATTGAAAGCCAGAATGAAGTCCTGGCTGCAAATACTGATTTTGTCACATATGCTCAGGCTCCATCAACTCCTGGACTATTTGAAGAGCCAAATCTGTTTGCTGTTCAGGAACCTATGGCCTGCAATGATCAGTTGGATTTTGAAGACCATAATTTATCAAACCATAATTTATCAAACTTAGCATCCGTGGGCAACTCAGAAAATGCTGGTAGTATGTCAGGTCCGCGTTGTGGGGATGATAGTACCAAGGAGAATGGCTATCATTTGGGCGATATAGAGATCAAACAAGCAAGGCCACAGGAGCATGACCAAATTAAACCTTTTTCTCCAGTATTGGAATGTTCAAAGGGGACAGTTGGTGCATTGGATGGCCGAAACAGGGTGGAAGATATACATAATGGTATTGTGATAAACAATGAACCACTTATGCCCTGCCTAGATCAAAAGGATGACCAACATGTAGAACCTGCTGGAGTTAGGTTGGATGAAACTGATGCATCTCCTAGCTGCTCCCAGGTCACATCTGAGTTGGACGACCCTTCTCGTAAGATTTGTTCAAGTAGTAACTTTCCGAGAGTATCAGAGGATTATTTGGAGGATCAACAGACATATTTAAAGCCTGAAATACAGAATGATGTTGAAATTGCTAATAATATGGGAGAATCGTGCACACATATCATTACAGATCCTTTGAAGCCTGTTACGTATGAAGACACAGCAGCTGCTGAAGTGCCTGTGCTCCGGGCATGTGGCTCCCTCCCAAGTCATCATGATATACCATCTCCTACCGATAAAATTTCGGAAGTCCCTTGCAACTTACCATCTGAGGTTGTAGGGCCAACTTCATTGGAGAATGCAACATCTTTGGAGACTCAATTGGAGAACTTGGATAGATCGACCACTTCTAACTTGCCTGCACCTGAAAAGTTGCTCTCTGTACCAGAGGGGTTCACTTCTAAACCAAGTGATTTTATAGTAGAAACTACGCCTGAAAAAGAAGTCATAGTTGGGGATGCCGGTGATGGTGATGGGATTAAATTCATATCAGGGAAAAAACGTAGTTCCACAGAAAGTACAATGACAGTGCAGAGTTTAAATTCAGTTGAATCATTTGGGGTGGCCCGAGAAGAGAGAACTGCAGAATCTATCCCTGATGATGATGATTTATTGTCTTCTATTTTAGTTGGAAGAAGGTCTTCAGTTCTAAAAATGAAACCCACTCCGCCTGCACTTGAAATAATGTGCACAAAACGCTCAAGAACTGCTGTCCGTGGTACCTCTTCAAAGAGGAAAGTGCTAATGGATGATACAATGGTTTTGCATGGCGATCAAATACGCCAGCAGTTGACAAATACTGAAGACATACGTCGTGTGCGAAAAAAGGCTCCTTGTACTTGCCCAGAAATTTCAATGATTCAGCGACAATTTTTGGAAGATGCAATTTTCACTGAACCCATATTTACTGGCATGTCGGCGGAACTGATATATCTGCACACTGAAACATTTGATCTGAGCACAATCCGGGTTTCTGAAAATGATCAAAACAATGCTTCTATGGAGCCATTGAAGGATGTAGCATCCTCTCTGGAGCCAAATGCTACTAAAGAAATTGAACCCCTTCGAAGCACTGAACCTTTAATAGCGAGAGATGACACAGCAGCACAGCCTGCTGACATTGAGAACGAAAACCAGAAGGAAGATCATAACCTAAAGTCTCACCATACTGATGCTGAAGAACAAAGGATCAGTGACTTGGAAGAACTTAATACTTCCAAACATGAACACTTGGGAGAGATAGCTGAAATGGAAATTGACAAAGAAAATTTTGAAGTTGCTGATCCTGTTTTAGAAGATATTTACAAGGTGTCAGCTGATGTTAACGTCCAGTCAAGGCTTGTGGATAAAACTGAGGAGGAAAATGCATCACTGCAGATTGATGCATTATGCGGGTCACTAGACAATAAGTTGGACGCCCAACCCATGGAGGTGGACGCATTGATAGTGGAGTCAAGTATCCAGAAAGAAGTTGATGCCATTCAAGTTGTTGACCACAGTGTCGAAATCAGAGCGGATGTTCAGATAGGTGCATCTGAACTTATTGACAGTGTAGATGTTACGCTTGCAACTGGGGAATGCAAAAACCTCAGTTTTTCAACTGATCAATCTGTGGGAGAAATTGAAAACAGCGAGCAACATACTGTGAATGAAACTGAGGTCCTGGAGGCAAACTTGCATTGTGATGACAACCCAAACTCTTATTGTATTCATGGTGAAGACAACGAGAATGCTTCCTGGAATGGTAAGGAAAATCTAGGTTGCCGGGAGGTTGGTCCACGTAGCGGTATTGATGCAGAAGTCACTGCAGACCCCCCTCCAGAAGATCGTGGTGATTATGAAGATGTAGCTTTTGGAGATGATACAGAATTTTTGAATGTAGATGATGATGAAATAGCTGAAGATGTCGATGACATGCCATGCGCTGGAGATACTCGTCTTCTTGAGAATAGTGGATGGTCTTCCCGCACCAGGGCTGTTGCCAAGTATCTCCAGACTTTACTTTATAAGGAACCTGTGCATGGGAAAAAGGTTCTTGGGATGGACAGTTTATTAAATGGTAAAACTCGAAAGGAAGCATCAAGGATGTTTTTTGAAACATTGGTGCTTAAGACAAGGGATTACATCCATGTGGAACAGGCAAAGCCTTTTGACAACGTCTACATAGGACCTCAAGTAAAACTCATGAAATCAGAGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007275 GO:0008150 GO:0008152 GO:0008278 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0070601 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

987

Amino Acids

108.99

Weight (kDa)

4.44

Isoelectric Point (pI)

46.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004515)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16270
fragaria_vesca	FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010
malus_domestica	MD00G1016700.v1.1
prunus_persica	Prupe.6G366000_v2.0.a1 Prupe.6G366000_v2.0.a1
pyrus_communis	pycom04g22040 pycom10g04620 pycom12g24300
rosa_chinensis	RchiOBHm_Chr3g0447331
rosa_laevigata	RLG00000026010
rosa_multiflora	Rmu_ssc0000473.1_g000001
rosa_roxburghii	Rroxscaffold_6G00425510
rosa_rugosa	Rorug02G0599600.1 Rorug02G0599700.1 Rorug02G0599800.1 Rorug02G0599900
rosa_samantha	Rh3AG000300 Rh3BG000100 Rh3CG000100 Rh3DG000300 Rh5AG542800 Rh5AG542900
rosa_wichuraiana	Rw3G000010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2766
AasI	GACNNNNNNGTC	1 cut(s)	2258
Acc36I	ACCTGC	1 cut(s)	679
Acc65I	GGTACC	1 cut(s)	1478
AccB1I	GGYRCC	1 cut(s)	1478
AccB7I	CCANNNNNTGG	2 cut(s)	2185, 2684
AccBSI	CCGCTC	2 cut(s)	6, 2273
AccI	GTMKAC	1 cut(s)	2919
AccII	CGCG	1 cut(s)	430
AciI	CCGC	8 cut(s)	6, 428, 1427, 1679, 2151, 2273, 2544, 2725
AclWI	GGATC	5 cut(s)	104, 810, 884, 1955, 2036
AcoI	YGGCCR	1 cut(s)	574
AcsI	RAATTY	8 cut(s)	43, 95, 999, 1241, 1300, 1608, 2026, 2627
AcuI	CTGAAG	5 cut(s)	951, 1386, 1581, 1956, 2679
AcyI	GRCGYC	1 cut(s)	2175
AfaI	GTAC	5 cut(s)	448, 1143, 1279, 1480, 1597
AfiI	CCNNNNNNNGG	8 cut(s)	434, 583, 2185, 2543, 2684, 2730, 2731, 2780
AflII	CTTAAG	1 cut(s)	2867
AflIII	ACRYGT	1 cut(s)	661
AjnI	CCWGG	7 cut(s)	172, 225, 274, 717, 2421, 2495, 2729
AjuI	GAANNNNNNNTTGG	2 cut(s)	1194, 1226
AluBI	AGCT	7 cut(s)	79, 711, 926, 2003, 2075, 2609, 2657
AluI	AGCT	7 cut(s)	79, 711, 926, 2003, 2075, 2609, 2657
Alw21I	GWGCWC	4 cut(s)	875, 945, 1451, 1721
Alw26I	GTCTC	2 cut(s)	1067, 1923
Alw44I	GTGCAC	2 cut(s)	871, 1447
AlwI	GGATC	5 cut(s)	104, 810, 884, 1955, 2036
AlwNI	CAGNNNCTG	2 cut(s)	926, 929
Ama87I	CYCGRG	1 cut(s)	1326
AoxI	GGCC	6 cut(s)	124, 321, 497, 574, 1040, 1323
ApaLI	GTGCAC	2 cut(s)	871, 1447
ApeKI	GCWGC	5 cut(s)	230, 711, 923, 926, 1862
ApoI	RAATTY	8 cut(s)	43, 95, 999, 1241, 1300, 1608, 2026, 2627
ArsI	GACNNNNNNTTYG	2 cut(s)	46, 78
Asp700I	GAANNNNTTC	2 cut(s)	1399, 1821
Asp718I	GGTACC	1 cut(s)	1478
AspLEI	GCGC	1 cut(s)	2684
AspS9I	GGNCC	8 cut(s)	54, 124, 425, 1040, 1324, 2419, 2534, 2927
AsuC2I	CCSGG	3 cut(s)	947, 1727, 2525
AsuHPI	GGTGA	6 cut(s)	25, 1235, 1241, 1913, 2486, 2603
AsuII	TTCGAA	1 cut(s)	1825
AvaI	CYCGRG	1 cut(s)	1326
AvaII	GGWCC	5 cut(s)	54, 425, 2419, 2534, 2927
BaeGI	GKGCMC	2 cut(s)	875, 1451
BaeI	ACNNNNGTAYC	2 cut(s)	1503, 1536
BanI	GGYRCC	1 cut(s)	1478
BbsI	GAAGAC	8 cut(s)	354, 921, 1368, 1392, 1569, 2484, 2690, 2712
Bbv12I	GWGCWC	4 cut(s)	875, 945, 1451, 1721
BbvI	GCAGC	5 cut(s)	217, 698, 913, 935, 1874
BciT130I	CCWGG	7 cut(s)	174, 227, 276, 719, 2423, 2497, 2731
BciVI	GTATCC	2 cut(s)	162, 2228
BclI	TGATCA	3 cut(s)	331, 1741, 2362
BcnI	CCSGG	3 cut(s)	947, 1727, 2525
BcoDI	GTCTC	2 cut(s)	1067, 1923
BfaI	CTAG	4 cut(s)	641, 708, 2159, 2516
BfmI	CTRYAG	3 cut(s)	1341, 2132, 2565
BfrI	CTTAAG	1 cut(s)	2867
BfuAI	ACCTGC	1 cut(s)	679
BfuI	GTATCC	2 cut(s)	162, 2228
BisI	GCNGC	5 cut(s)	231, 712, 924, 927, 1863
BlsI	GCNGC	5 cut(s)	232, 713, 925, 928, 1864
Bme18I	GGWCC	5 cut(s)	54, 425, 2419, 2534, 2927
BmeT110I	CYCGRG	1 cut(s)	1326
BmgT120I	GGNCC	8 cut(s)	54, 124, 425, 1040, 1324, 2419, 2534, 2927
BmiI	GGNNCC	9 cut(s)	178, 264, 315, 958, 1480, 1590, 1764, 1794, 2772
BmrI	ACTGGG	1 cut(s)	2340
BmuI	ACTGGG	1 cut(s)	2340
BoxI	GACNNNNGTC	1 cut(s)	1569
BpiI	GAAGAC	8 cut(s)	354, 921, 1368, 1392, 1569, 2484, 2690, 2712
BpmI	CTGGAG	7 cut(s)	516, 696, 1811, 2444, 2562, 2706, 2735
Bpu10I	CCTNAGC	1 cut(s)	258
Bpu14I	TTCGAA	1 cut(s)	1825
BpuEI	CTTGAG	4 cut(s)	65, 1444, 2723, 2916
BpuMI	CCSGG	3 cut(s)	947, 1727, 2525
Bsa29I	ATCGAT	1 cut(s)	108
BsaAI	YACGTR	2 cut(s)	909, 2540
BsaHI	GRCGYC	1 cut(s)	2175
BsaJI	CCNNGG	6 cut(s)	390, 450, 717, 1474, 2184, 2730
Bsc4I	CCNNNNNNNGG	8 cut(s)	434, 583, 2185, 2543, 2684, 2730, 2731, 2780
Bse118I	RCCGGY	1 cut(s)	1220
Bse1I	ACTGG	4 cut(s)	533, 1672, 2089, 2335
Bse3DI	GCAATG	1 cut(s)	334
BseBI	CCWGG	7 cut(s)	174, 227, 276, 719, 2423, 2497, 2731
BseCI	ATCGAT	1 cut(s)	108
BseDI	CCNNGG	6 cut(s)	390, 450, 717, 1474, 2184, 2730
BseLI	CCNNNNNNNGG	8 cut(s)	434, 583, 2185, 2543, 2684, 2730, 2731, 2780
BseMI	GCAATG	1 cut(s)	334
BseNI	ACTGG	4 cut(s)	533, 1672, 2089, 2335
BseRI	GAGGAG	1 cut(s)	2129
BseSI	GKGCMC	2 cut(s)	875, 1451
BseXI	GCAGC	5 cut(s)	217, 698, 913, 935, 1874
BsgI	GTGCAG	4 cut(s)	1104, 1310, 1416, 1679
Bsh1236I	CGCG	1 cut(s)	430
BshFI	GGCC	6 cut(s)	126, 323, 499, 576, 1042, 1325
BshNI	GGYRCC	1 cut(s)	1478
BshVI	ATCGAT	1 cut(s)	108
BsiHKAI	GWGCWC	4 cut(s)	875, 945, 1451, 1721
BsiHKCI	CYCGRG	1 cut(s)	1326
BsiSI	CCGG	4 cut(s)	946, 1221, 1726, 2524
BslFI	GGGAC	2 cut(s)	568, 995
BslI	CCNNNNNNNGG	8 cut(s)	434, 583, 2185, 2543, 2684, 2730, 2731, 2780
BsmAI	GTCTC	2 cut(s)	1067, 1923
BsmFI	GGGAC	2 cut(s)	568, 995
BsmI	GAATGC	3 cut(s)	1063, 2342, 2494
BsnI	GGCC	6 cut(s)	126, 323, 499, 576, 1042, 1325
BsoBI	CYCGRG	1 cut(s)	1326
Bsp119I	TTCGAA	1 cut(s)	1825
Bsp1286I	GDGCHC	4 cut(s)	875, 945, 1451, 1721
Bsp19I	CCATGG	1 cut(s)	2184
BspACI	CCGC	8 cut(s)	6, 428, 1427, 1679, 2151, 2273, 2544, 2725
BspANI	GGCC	6 cut(s)	126, 323, 499, 576, 1042, 1325
BspDI	ATCGAT	1 cut(s)	108
BspFNI	CGCG	1 cut(s)	430
BspHI	TCATGA	2 cut(s)	973, 2943
BspLI	GGNNCC	9 cut(s)	178, 264, 315, 958, 1480, 1590, 1764, 1794, 2772
BspMAI	CTGCAG	3 cut(s)	1345, 2136, 2569
BspMI	ACCTGC	1 cut(s)	679
BspPI	GGATC	5 cut(s)	104, 810, 884, 1955, 2036
BspQI	GCTCTTC	1 cut(s)	282
BspT104I	TTCGAA	1 cut(s)	1825
BspT107I	GGYRCC	1 cut(s)	1478
BspTI	CTTAAG	1 cut(s)	2867
BsrBI	CCGCTC	2 cut(s)	6, 2273
BsrDI	GCAATG	1 cut(s)	334
BsrFI	RCCGGY	1 cut(s)	1220
BsrI	ACTGG	4 cut(s)	533, 1672, 2089, 2335
BssAI	RCCGGY	1 cut(s)	1220
BssECI	CCNNGG	6 cut(s)	390, 450, 717, 1474, 2184, 2730
BssNI	GRCGYC	1 cut(s)	2175
BssT1I	CCWWGG	2 cut(s)	450, 2184
Bst2UI	CCWGG	7 cut(s)	174, 227, 276, 719, 2423, 2497, 2731
Bst4CI	ACNGT	6 cut(s)	559, 1288, 2258, 2309, 2404, 2807
Bst6I	CTCTTC	3 cut(s)	282, 1326, 1489
BstACI	GRCGYC	1 cut(s)	2175
BstAFI	CTTAAG	1 cut(s)	2867
BstAPI	GCANNNNNTGC	1 cut(s)	1871
BstBAI	YACGTR	2 cut(s)	909, 2540
BstBI	TTCGAA	1 cut(s)	1825
BstC8I	GCNNGC	7 cut(s)	325, 1119, 1431, 1544, 1872, 2325, 2393
BstDSI	CCRYGG	3 cut(s)	390, 1474, 2184
BstFNI	CGCG	1 cut(s)	430
BstHHI	GCGC	1 cut(s)	2684
BstMAI	GTCTC	2 cut(s)	1067, 1923
BstMWI	GCNNNNNNNGC	3 cut(s)	505, 1455, 1871
BstNI	CCWGG	7 cut(s)	174, 227, 276, 719, 2423, 2497, 2731
BstNSI	RCATGY	4 cut(s)	665, 954, 1675, 2677
BstPAI	GACNNNNGTC	1 cut(s)	1569
BstSFI	CTRYAG	3 cut(s)	1341, 2132, 2565
BstSLI	GKGCMC	2 cut(s)	875, 1451
BstSNI	TACGTA	1 cut(s)	909
BstUI	CGCG	1 cut(s)	430
BstV1I	GCAGC	5 cut(s)	217, 698, 913, 935, 1874
BstV2I	GAAGAC	8 cut(s)	354, 921, 1368, 1392, 1569, 2484, 2690, 2712
BstX2I	RGATCY	1 cut(s)	889
BstXI	CCANNNNNNTGG	1 cut(s)	2191
BstYI	RGATCY	1 cut(s)	889
Bsu15I	ATCGAT	1 cut(s)	108
BsuI	GTATCC	2 cut(s)	162, 2228
BsuRI	GGCC	6 cut(s)	126, 323, 499, 576, 1042, 1325
BsuTUI	ATCGAT	1 cut(s)	108
BtgI	CCRYGG	3 cut(s)	390, 1474, 2184
BtsI	GCAGTG	2 cut(s)	2129, 2562
BtsIMutI	CAGTG	9 cut(s)	1293, 1650, 1698, 1830, 1957, 2129, 2263, 2314, 2562
BveI	ACCTGC	1 cut(s)	679
Cac8I	GCNNGC	7 cut(s)	325, 1119, 1431, 1544, 1872, 2325, 2393
CaiI	CAGNNNCTG	2 cut(s)	926, 929
CciI	TCATGA	2 cut(s)	973, 2943
CfoI	GCGC	1 cut(s)	2684
Cfr10I	RCCGGY	1 cut(s)	1220
Cfr13I	GGNCC	8 cut(s)	54, 124, 425, 1040, 1324, 2419, 2534, 2927
ClaI	ATCGAT	1 cut(s)	108
CseI	GACGC	2 cut(s)	2183, 2204
Csp6I	GTAC	5 cut(s)	447, 1142, 1278, 1479, 1596
CspCI	CAANNNNNGTGG	2 cut(s)	2082, 2117
CviQI	GTAC	5 cut(s)	447, 1142, 1278, 1479, 1596
DraI	TTTAAA	2 cut(s)	819, 1299
DrdI	GACNNNNNNGTC	1 cut(s)	2258
DseDI	GACNNNNNNGTC	1 cut(s)	2258
EaeI	YGGCCR	1 cut(s)	574
Eam1104I	CTCTTC	3 cut(s)	282, 1326, 1489
EarI	CTCTTC	3 cut(s)	282, 1326, 1489
EciI	GGCGGA	2 cut(s)	1416, 1694
Eco105I	TACGTA	1 cut(s)	909
Eco130I	CCWWGG	2 cut(s)	450, 2184
Eco47I	GGWCC	5 cut(s)	54, 425, 2419, 2534, 2927
Eco57I	CTGAAG	5 cut(s)	951, 1386, 1581, 1956, 2679
Eco88I	CYCGRG	1 cut(s)	1326
EcoO109I	RGGNCCY	3 cut(s)	54, 2419, 2927
EcoRII	CCWGG	7 cut(s)	172, 225, 274, 717, 2421, 2495, 2729
EcoT14I	CCWWGG	2 cut(s)	450, 2184
EcoT22I	ATGCAT	3 cut(s)	703, 2128, 2146
ErhI	CCWWGG	2 cut(s)	450, 2184
FalI	AAGNNNNNCTT	2 cut(s)	1384, 1416
FaqI	GGGAC	2 cut(s)	568, 995
FauI	CCCGC	2 cut(s)	2144, 2732
FauNDI	CATATG	1 cut(s)	253
FbaI	TGATCA	3 cut(s)	331, 1741, 2362
FblI	GTMKAC	1 cut(s)	2919
Fnu4HI	GCNGC	5 cut(s)	231, 712, 924, 927, 1863
Fsp4HI	GCNGC	5 cut(s)	231, 712, 924, 927, 1863
FspBI	CTAG	4 cut(s)	641, 708, 2159, 2516
GlaI	GCGC	1 cut(s)	2683
GluI	GCNGC	5 cut(s)	231, 712, 924, 927, 1863
GsuI	CTGGAG	7 cut(s)	516, 696, 1811, 2444, 2562, 2706, 2735
HaeIII	GGCC	6 cut(s)	126, 323, 499, 576, 1042, 1325
HapII	CCGG	4 cut(s)	946, 1221, 1726, 2524
HgaI	GACGC	2 cut(s)	2183, 2204
HhaI	GCGC	1 cut(s)	2684
Hin1I	GRCGYC	1 cut(s)	2175
Hin6I	GCGC	1 cut(s)	2682
HinP1I	GCGC	1 cut(s)	2682
HincII	GTYRAC	3 cut(s)	1551, 2083, 2251
HindII	GTYRAC	3 cut(s)	1551, 2083, 2251
HinfI	GANTC	6 cut(s)	866, 1075, 1310, 1346, 1618, 2210
HpaI	GTTAAC	1 cut(s)	2083
HpaII	CCGG	4 cut(s)	946, 1221, 1726, 2524
HphI	GGTGA	6 cut(s)	25, 1235, 1241, 1913, 2486, 2603
Hpy166II	GTNNAC	9 cut(s)	873, 1155, 1449, 1551, 2083, 2194, 2251, 2537, 2920
Hpy188III	TCNNGA	9 cut(s)	311, 974, 1461, 1790, 2221, 2579, 2702, 2752, 2944
Hpy8I	GTNNAC	9 cut(s)	873, 1155, 1449, 1551, 2083, 2194, 2251, 2537, 2920
Hpy99I	CGWCG	1 cut(s)	1575
HpyAV	CCTTC	5 cut(s)	753, 1389, 1765, 1832, 1891
HpyCH4III	ACNGT	6 cut(s)	559, 1288, 2258, 2309, 2404, 2807
HpyCH4IV	ACGT	6 cut(s)	908, 1261, 1570, 2085, 2539, 2916
HpyF10VI	GCNNNNNNNGC	3 cut(s)	505, 1455, 1871
HpySE526I	ACGT	6 cut(s)	908, 1261, 1570, 2085, 2539, 2916
Hsp92I	GRCGYC	1 cut(s)	2175
HspAI	GCGC	1 cut(s)	2682
KpnI	GGTACC	1 cut(s)	1482
Ksp22I	TGATCA	3 cut(s)	331, 1741, 2362
KspAI	GTTAAC	1 cut(s)	2083
LguI	GCTCTTC	1 cut(s)	282
LmnI	GCTCC	8 cut(s)	268, 505, 719, 948, 962, 1594, 1762, 1792
Lsp1109I	GCAGC	5 cut(s)	217, 698, 913, 935, 1874
MaeI	CTAG	4 cut(s)	641, 708, 2159, 2516
MaeII	ACGT	6 cut(s)	908, 1261, 1570, 2085, 2539, 2916
MaeIII	GTNAC	9 cut(s)	133, 247, 721, 767, 904, 1952, 2154, 2317, 2560
MbiI	CCGCTC	2 cut(s)	6, 2273
MfeI	CAATTG	1 cut(s)	1079
MflI	RGATCY	1 cut(s)	889
MhlI	GDGCHC	4 cut(s)	875, 945, 1451, 1721
MlyI	GAGTC	2 cut(s)	1069, 2219
MmeI	TCCRAC	5 cut(s)	318, 666, 714, 1369, 2151
Mph1103I	ATGCAT	3 cut(s)	703, 2128, 2146
MroXI	GAANNNNTTC	2 cut(s)	1399, 1821
MseI	TTAA	9 cut(s)	519, 818, 1239, 1298, 1841, 1968, 2082, 2813, 2868
MslI	CAYNNNNRTG	5 cut(s)	194, 1929, 2189, 2442, 2888
MspA1I	CMGCKG	2 cut(s)	926, 2075
MspCI	CTTAAG	1 cut(s)	2867
MspI	CCGG	4 cut(s)	946, 1221, 1726, 2524
MunI	CAATTG	1 cut(s)	1079
Mva1269I	GAATGC	3 cut(s)	1063, 2342, 2494
MvaI	CCWGG	7 cut(s)	174, 227, 276, 719, 2423, 2497, 2731
MvnI	CGCG	1 cut(s)	430
MwoI	GCNNNNNNNGC	3 cut(s)	505, 1455, 1871
NciI	CCSGG	3 cut(s)	947, 1727, 2525
NcoI	CCATGG	1 cut(s)	2184
NdeI	CATATG	1 cut(s)	253
NlaIV	GGNNCC	9 cut(s)	178, 264, 315, 958, 1480, 1590, 1764, 1794, 2772
NmuCI	GTSAC	5 cut(s)	247, 721, 1952, 2154, 2560
NsiI	ATGCAT	3 cut(s)	703, 2128, 2146
NspI	RCATGY	4 cut(s)	665, 954, 1675, 2677
NspV	TTCGAA	1 cut(s)	1825
PagI	TCATGA	2 cut(s)	973, 2943
PciI	ACATGT	1 cut(s)	661
PciSI	GCTCTTC	1 cut(s)	282
PcsI	WCGNNNNNNNCGW	1 cut(s)	1576
PctI	GAATGC	3 cut(s)	1063, 2342, 2494
PdmI	GAANNNNTTC	2 cut(s)	1399, 1821
PfeI	GAWTC	4 cut(s)	866, 1310, 1346, 1618
PflFI	GACNNNGTC	1 cut(s)	2915
PflMI	CCANNNNNTGG	2 cut(s)	2185, 2684
PfoI	TCCNGGA	3 cut(s)	274, 2421, 2495
PkrI	GCNGC	5 cut(s)	232, 713, 925, 928, 1864
PleI	GAGTC	2 cut(s)	1069, 2218
PpsI	GAGTC	2 cut(s)	1069, 2218
Ppu21I	YACGTR	2 cut(s)	909, 2540
PpuMI	RGGWCCY	3 cut(s)	54, 2419, 2927
PscI	ACATGT	1 cut(s)	661
PshAI	GACNNNNGTC	1 cut(s)	1569
PsiI	TTATAA	1 cut(s)	2766
Psp5II	RGGWCCY	3 cut(s)	54, 2419, 2927
Psp6I	CCWGG	7 cut(s)	172, 225, 274, 717, 2421, 2495, 2729
PspGI	CCWGG	7 cut(s)	172, 225, 274, 717, 2421, 2495, 2729
PspN4I	GGNNCC	9 cut(s)	178, 264, 315, 958, 1480, 1590, 1764, 1794, 2772
PspPI	GGNCC	8 cut(s)	54, 124, 425, 1040, 1324, 2419, 2534, 2927
PspPPI	RGGWCCY	3 cut(s)	54, 2419, 2927
PsrI	GAACNNNNNNTAC	2 cut(s)	742, 774
PstI	CTGCAG	3 cut(s)	1345, 2136, 2569
PstNI	CAGNNNCTG	2 cut(s)	926, 929
PsuI	RGATCY	1 cut(s)	889
PsyI	GACNNNGTC	1 cut(s)	2915
PvuII	CAGCTG	2 cut(s)	926, 2075
RsaI	GTAC	5 cut(s)	448, 1143, 1279, 1480, 1597
RsaNI	GTAC	5 cut(s)	447, 1142, 1278, 1479, 1596
RseI	CAYNNNNRTG	5 cut(s)	194, 1929, 2189, 2442, 2888
SapI	GCTCTTC	1 cut(s)	282
SaqAI	TTAA	9 cut(s)	519, 818, 1239, 1298, 1841, 1968, 2082, 2813, 2868
SatI	GCNGC	5 cut(s)	231, 712, 924, 927, 1863
Sau96I	GGNCC	8 cut(s)	54, 124, 425, 1040, 1324, 2419, 2534, 2927
SchI	GAGTC	2 cut(s)	1069, 2219
SduI	GDGCHC	4 cut(s)	875, 945, 1451, 1721
SfcI	CTRYAG	3 cut(s)	1341, 2132, 2565
SfuI	TTCGAA	1 cut(s)	1825
SinI	GGWCC	5 cut(s)	54, 425, 2419, 2534, 2927
SmiMI	CAYNNNNRTG	5 cut(s)	194, 1929, 2189, 2442, 2888
SmlI	CTYRAG	5 cut(s)	80, 1459, 2702, 2867, 2931
SmoI	CTYRAG	5 cut(s)	80, 1459, 2702, 2867, 2931
SnaBI	TACGTA	1 cut(s)	909
SsiI	CCGC	8 cut(s)	6, 428, 1427, 1679, 2151, 2273, 2544, 2725
SspMI	CTAG	4 cut(s)	641, 708, 2159, 2516
StyI	CCWWGG	2 cut(s)	450, 2184
TaaI	ACNGT	6 cut(s)	559, 1288, 2258, 2309, 2404, 2807
TaiI	ACGT	6 cut(s)	911, 1264, 1573, 2088, 2542, 2919
TaqI	TCGA	6 cut(s)	108, 1100, 1825, 2262, 2667, 2827
TatI	WGTACW	2 cut(s)	1277, 1595
TfiI	GAWTC	4 cut(s)	866, 1310, 1346, 1618
Tru1I	TTAA	9 cut(s)	519, 818, 1239, 1298, 1841, 1968, 2082, 2813, 2868
Tru9I	TTAA	9 cut(s)	519, 818, 1239, 1298, 1841, 1968, 2082, 2813, 2868
TscAI	CASTG	9 cut(s)	1293, 1657, 1705, 1837, 1957, 2136, 2263, 2314, 2569
TseFI	GTSAC	5 cut(s)	247, 721, 1952, 2154, 2560
TseI	GCWGC	5 cut(s)	230, 711, 923, 926, 1862
Tsp45I	GTSAC	5 cut(s)	247, 721, 1952, 2154, 2560
TspGWI	ACGGA	2 cut(s)	379, 1463
TspRI	CASTG	9 cut(s)	1293, 1657, 1705, 1837, 1957, 2136, 2263, 2314, 2569
Tth111I	GACNNNGTC	1 cut(s)	2915
Van91I	CCANNNNNTGG	2 cut(s)	2185, 2684
Vha464I	CTTAAG	1 cut(s)	2867
VneI	GTGCAC	2 cut(s)	871, 1447
VpaK11BI	GGWCC	5 cut(s)	54, 425, 2419, 2534, 2927
XapI	RAATTY	8 cut(s)	43, 95, 999, 1241, 1300, 1608, 2026, 2627
XceI	RCATGY	4 cut(s)	665, 954, 1675, 2677
XmiI	GTMKAC	1 cut(s)	2919
XmnI	GAANNNNTTC	2 cut(s)	1399, 1821
XspI	CTAG	4 cut(s)	641, 708, 2159, 2516
Zsp2I	ATGCAT	3 cut(s)	703, 2128, 2146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.