Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0004515

Physical Location & Seq

Genomic Coordinates Reverse (-)

45094 .. 56580

Gene Structure 11487 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G000010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGGAGAAGCATGCACACCTAACATTGTAGATTCTTCCAACCCTGTAGCTCATGAAAAGATGGCATCTGCCCAACACTCTGTGCTCCAGGCATGCAACTCCCATCCGAGTCATCACGGTGTGCTATCTCCTTCAGATAAAAGTGCAGAAATTCCTTGCAACTTATCATCTGAGGTTGTGCGGTTGAAGTCAGTGGACAATGCTATATCTTGCGACAATCAACCAGATGTTTTGGATAGGTCTGCTACTCCCGACTTGCTTGCACCTGAAAAGTTTCTATCTATACCGGACGGGCTCACTGCTGAACCAAGTGATTTACCAATGGAGTCTACACCTGACAAAGAAGTCTTTGGTGGGGATGGTGTTGATGGTGCTGGGACCAAACTCATCTCAGGGAAGAAACGCAGTTCTACAGAAAGTACTGTAACAGTTCAAAGTTTAAATTCAGTTGAGTCATTTGGGGAGGCCCGAGGAAAGCGAACTGCAGATTCCATCCCCGATGATGATGATTTATTGTCTTCTATTTTAGTTGGGAGAAAATCTTCAGTTTTAAAACTGAAACCGACTCCGCCTGTACCTGAAATGAAAACCGCAAAACGCTCCCGAACTGCTCTTCGTGGCACTGCCTCAAAGAGAAAAGTGCTAATGGATGATACAATGGTTCTGCATGGCGATACAATACGCCAGCAGTTGACAAATACCGAAGATATACGTCGTGTGCGGAAAAAAGCCCCTTGTACTCGCCCAGAAATTTCAATGATTCAGAGACAAAATTTGGAAGATGAAATTTTCATTGAACCCATTGTCACAGGCATGTCGGGGGAACTGACATTTCTGCACACTGAGAATTTTGATCTGAGTAGAACCAGGTTTTCTGAAGATGATCAAGACAATGCTTCTGACGAGGTACTGAAGGATGTACGGTATTCCGTGAGGTCAAATGTTACTGAAGAATCTGAAATCCTTGGAAGCACTGAGCCTGTAATAGTAAGAGATGATGCAGAAGCACAAGCGGACATTGTTATTGAGACTAAAAACTGGGGGATGCAAGATCATAACCTAAGATCTCAGGATACTGATGCTCAAGGGCAGGGGATTACCAACCCAGAAGAATCGAAGCATGAACCCTTGGCGGAGGTGAGTGAAATGGAAATTGATGTAAACAATGCAGAAGTTACCTATCCTGTTTCAGGAGATATATACGATATGCCATCTGAAGATAACATCCAGCCAAGGCTCCTGAATAAAATTGATGAGGAAGATGCTTCTCTGCAGATGGGTGCATTATGCATGTCCCCAGATGAAAAGTTGGACAGTCGACCTATTGAGGTGGATGCGTCGATAGTGGATGCAAGTATTCAGAAAGGAGTTGACGCTATTGGATTTGTTGAGCATAATGTCGAAATCAGAGCAGATGTTCAGATGGGTTTTTCTGAACTTACTGACATAAATTCTACACTTGCAACTGTATGTCTTGAAACTGGCGACAACAAAAACCTGAGTTCTTCAAATGATCATTCTATGGAAGAAATGGGACATGAGCTGCATATTTTGAATGAAAATGAGGTCCTGGATGCAAGCTTTGGTTGTGATGACAAGGACACCAAGTCTAGTTGTATGCTTGGTGGAGAAGACAACATTGGTTCTACAATTTCGTTGGAACTTGATGTGGATGCAAAGTATATTTCCTTCAGTGATAAGGAAAACCTAGAACATGAGGAGGCTGATCCACGGAGTGGAACTGAGGCAGAAGTCACTGCAGACCACCCTGCTGCAAATTGTGGAGATTGTGGCGATCTAGTTTTTGGAAATGATACAGAATTTTTGAATGTAGATGATGAAGAGATAGCCGAGGAAGGGGATGACATGCCGACTGCTGAAGACACTAGTCTTCTTGAAAACAGTGGATGGTCTTCCCGCACCAGGGCTGTTGCCAAGTATCTTCAAACTTTATTTGATAAGGAAGCTGTGCATGGGAAAAAAGTTCTCGGCATGGACAACTTATTAAATGGAAAAACTCGCAAGGAAGCTTCAAGGATGTTTTTTGAAACATTGGTTCTTAAGACAAGGGATTACATCAATGTAGACCAGGCAAAACCCTTTGACAACATTAACATAAAGCCTAGAGTAAAGCTCATGAAATCAGACTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007275 GO:0008150 GO:0008152 GO:0008278 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0070601 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

717

Amino Acids

78.66

Weight (kDa)

4.48

Isoelectric Point (pI)

48.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8	PF04824	662 - 711	7.9e-19	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004515)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16270
fragaria_vesca	FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010 FvH4_6g00010
malus_domestica	MD00G1016700.v1.1
prunus_persica	Prupe.6G366000_v2.0.a1 Prupe.6G366000_v2.0.a1
pyrus_communis	pycom04g22040 pycom10g04620 pycom12g24300
rosa_chinensis	RchiOBHm_Chr3g0447331
rosa_laevigata	RLG00000026010
rosa_multiflora	Rmu_ssc0000473.1_g000001
rosa_roxburghii	Rroxscaffold_6G00425510
rosa_rugosa	Rorug02G0599600.1 Rorug02G0599700.1 Rorug02G0599800.1 Rorug02G0599900
rosa_samantha	Rh3AG000300 Rh3BG000100 Rh3CG000100 Rh3DG000300 Rh5AG542800 Rh5AG542900
rosa_wichuraiana	Rw3G000010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	344
AccB7I	CCANNNNNTGG	1 cut(s)	1736
AccI	GTMKAC	3 cut(s)	329, 1318, 2085
AciI	CCGC	7 cut(s)	181, 569, 591, 721, 1013, 1133, 1918
AclWI	GGATC	1 cut(s)	1721
AcsI	RAATTY	8 cut(s)	150, 442, 750, 772, 786, 847, 1450, 1820
AcuI	CTGAAG	8 cut(s)	117, 528, 897, 932, 969, 1236, 1675, 1899
AdeI	CACNNNGTG	3 cut(s)	82, 121, 1736
AfaI	GTAC	5 cut(s)	421, 576, 739, 909, 921
AfiI	CCNNNNNNNGG	5 cut(s)	1190, 1736, 1857, 1923, 1924
AflII	CTTAAG	1 cut(s)	2060
AhdI	GACNNNNNGTC	1 cut(s)	1606
AhlI	ACTAGT	1 cut(s)	1886
AjnI	CCWGG	5 cut(s)	87, 866, 1569, 1922, 2088
AjuI	GAANNNNNNNTTGG	2 cut(s)	1623, 1655
AluBI	AGCT	6 cut(s)	50, 1543, 1581, 1967, 2030, 2134
AluI	AGCT	6 cut(s)	50, 1543, 1581, 1967, 2030, 2134
Alw21I	GWGCWC	1 cut(s)	87
Alw26I	GTCTC	2 cut(s)	760, 1022
AlwI	GGATC	1 cut(s)	1721
Ama87I	CYCGRG	1 cut(s)	468
AoxI	GGCC	1 cut(s)	465
ApeKI	GCWGC	2 cut(s)	1543, 1772
ApoI	RAATTY	8 cut(s)	150, 442, 750, 772, 786, 847, 1450, 1820
Asp700I	GAANNNNTTC	2 cut(s)	273, 541
AspS9I	GGNCC	3 cut(s)	378, 466, 1567
AsuHPI	GGTGA	1 cut(s)	1150
AvaI	CYCGRG	1 cut(s)	468
AvaII	GGWCC	2 cut(s)	378, 1567
BaeI	ACNNNNGTAYC	2 cut(s)	645, 678
BanII	GRGCYC	1 cut(s)	297
BarI	GAAGNNNNNNTAC	2 cut(s)	1673, 1705
BbsI	GAAGAC	5 cut(s)	510, 1638, 1883, 1887, 1905
Bbv12I	GWGCWC	1 cut(s)	87
BbvI	GCAGC	2 cut(s)	1530, 1759
BccI	CCATC	9 cut(s)	55, 111, 353, 362, 500, 1219, 1270, 1417, 1902
BcgI	CGANNNNNNTGC	2 cut(s)	242, 276
BciT130I	CCWGG	5 cut(s)	89, 868, 1571, 1924, 2090
BciVI	GTATCC	1 cut(s)	1066
BclI	TGATCA	2 cut(s)	883, 1513
BcoDI	GTCTC	2 cut(s)	760, 1022
BcuI	ACTAGT	1 cut(s)	1886
BfaI	CTAG	5 cut(s)	1611, 1709, 1799, 1887, 2124
BfmI	CTRYAG	5 cut(s)	45, 411, 483, 1271, 1758
BfrI	CTTAAG	1 cut(s)	2060
BfuI	GTATCC	1 cut(s)	1066
BglII	AGATCT	1 cut(s)	1064
BisI	GCNGC	2 cut(s)	1544, 1773
BlsI	GCNGC	2 cut(s)	1545, 1774
BmcAI	AGTACT	1 cut(s)	421
Bme1390I	CCNGG	5 cut(s)	89, 868, 1571, 1924, 2090
Bme18I	GGWCC	2 cut(s)	378, 1567
BmeRI	GACNNNNNGTC	1 cut(s)	1606
BmeT110I	CYCGRG	1 cut(s)	468
BmgT120I	GGNCC	3 cut(s)	378, 466, 1567
BmiI	GGNNCC	2 cut(s)	379, 1238
BmrFI	CCNGG	5 cut(s)	89, 868, 1571, 1924, 2090
BmrI	ACTGGG	1 cut(s)	1048
BmsI	GCATC	9 cut(s)	74, 988, 1035, 1069, 1252, 1324, 1339, 1564, 1663
BmuI	ACTGGG	1 cut(s)	1048
BoxI	GACNNNNGTC	1 cut(s)	1887
BpiI	GAAGAC	5 cut(s)	510, 1638, 1883, 1887, 1905
BplI	GAGNNNNNCTC	2 cut(s)	2118, 2150
BpmI	CTGGAG	1 cut(s)	71
BpuEI	CTTGAG	1 cut(s)	1068
BsaJI	CCNNGG	7 cut(s)	469, 964, 1128, 1232, 1730, 1851, 1923
BsaWI	WCCGGW	1 cut(s)	286
Bsc4I	CCNNNNNNNGG	5 cut(s)	1190, 1736, 1857, 1923, 1924
Bse1I	ACTGG	2 cut(s)	1043, 1486
BseBI	CCWGG	5 cut(s)	89, 868, 1571, 1924, 2090
BseDI	CCNNGG	7 cut(s)	469, 964, 1128, 1232, 1730, 1851, 1923
BseLI	CCNNNNNNNGG	5 cut(s)	1190, 1736, 1857, 1923, 1924
BseMII	CTCAG	8 cut(s)	162, 405, 834, 848, 966, 1082, 1490, 1734
BseNI	ACTGG	2 cut(s)	1043, 1486
BseRI	GAGGAG	1 cut(s)	1733
BseXI	GCAGC	2 cut(s)	1530, 1759
BseYI	CCCAGC	1 cut(s)	374
BsgI	GTGCAG	2 cut(s)	165, 821
BshFI	GGCC	1 cut(s)	467
BsiHKAI	GWGCWC	1 cut(s)	87
BsiHKCI	CYCGRG	1 cut(s)	468
BsiSI	CCGG	1 cut(s)	287
BslFI	GGGAC	3 cut(s)	391, 1279, 1548
BslI	CCNNNNNNNGG	5 cut(s)	1190, 1736, 1857, 1923, 1924
BsmAI	GTCTC	2 cut(s)	760, 1022
BsmFI	GGGAC	3 cut(s)	391, 1279, 1548
BsnI	GGCC	1 cut(s)	467
BsoBI	CYCGRG	1 cut(s)	468
Bsp1286I	GDGCHC	2 cut(s)	87, 297
Bsp143I	GATC	7 cut(s)	853, 883, 1051, 1064, 1513, 1726, 1795
BspACI	CCGC	7 cut(s)	181, 569, 591, 721, 1013, 1133, 1918
BspANI	GGCC	1 cut(s)	467
BspCNI	CTCAG	8 cut(s)	163, 404, 835, 849, 967, 1081, 1491, 1735
BspHI	TCATGA	2 cut(s)	52, 2136
BspLI	GGNNCC	2 cut(s)	379, 1238
BspMAI	CTGCAG	3 cut(s)	487, 1275, 1762
BspPI	GGATC	1 cut(s)	1721
BspQI	GCTCTTC	1 cut(s)	618
BspTI	CTTAAG	1 cut(s)	2060
BsrI	ACTGG	2 cut(s)	1043, 1486
BssECI	CCNNGG	7 cut(s)	469, 964, 1128, 1232, 1730, 1851, 1923
BssMI	GATC	7 cut(s)	853, 883, 1051, 1064, 1513, 1726, 1795
BssT1I	CCWWGG	3 cut(s)	964, 1128, 1232
Bst2UI	CCWGG	5 cut(s)	89, 868, 1571, 1924, 2090
Bst4CI	ACNGT	7 cut(s)	119, 424, 430, 924, 1316, 1468, 1904
Bst6I	CTCTTC	2 cut(s)	618, 1836
BstAFI	CTTAAG	1 cut(s)	2060
BstC8I	GCNNGC	5 cut(s)	13, 94, 261, 686, 1579
BstDEI	CTNAG	9 cut(s)	171, 391, 843, 857, 975, 1061, 1068, 1499, 1743
BstDSI	CCRYGG	1 cut(s)	1730
BstENI	CCTNNNNNAGG	1 cut(s)	1188
BstKTI	GATC	7 cut(s)	856, 886, 1054, 1067, 1516, 1729, 1798
BstMAI	GTCTC	2 cut(s)	760, 1022
BstMBI	GATC	7 cut(s)	853, 883, 1051, 1064, 1513, 1726, 1795
BstNI	CCWGG	5 cut(s)	89, 868, 1571, 1924, 2090
BstNSI	RCATGY	5 cut(s)	15, 96, 817, 1294, 1870
BstPAI	GACNNNNGTC	1 cut(s)	1887
BstSCI	CCNGG	5 cut(s)	87, 866, 1569, 1922, 2088
BstSFI	CTRYAG	5 cut(s)	45, 411, 483, 1271, 1758
BstV1I	GCAGC	2 cut(s)	1530, 1759
BstV2I	GAAGAC	5 cut(s)	510, 1638, 1883, 1887, 1905
BstX2I	RGATCY	1 cut(s)	1064
BstYI	RGATCY	1 cut(s)	1064
BsuI	GTATCC	1 cut(s)	1066
BsuRI	GGCC	1 cut(s)	467
BtgI	CCRYGG	1 cut(s)	1730
BtsI	GCAGTG	3 cut(s)	297, 621, 1755
BtsIMutI	CAGTG	8 cut(s)	198, 297, 621, 840, 972, 1699, 1755, 1909
Cac8I	GCNNGC	5 cut(s)	13, 94, 261, 686, 1579
CciI	TCATGA	2 cut(s)	52, 2136
Cfr13I	GGNCC	3 cut(s)	378, 466, 1567
CseI	GACGC	2 cut(s)	1326, 1382
CsiI	ACCWGGT	1 cut(s)	866
Csp6I	GTAC	5 cut(s)	420, 575, 738, 908, 920
CviQI	GTAC	5 cut(s)	420, 575, 738, 908, 920
DdeI	CTNAG	9 cut(s)	171, 391, 843, 857, 975, 1061, 1068, 1499, 1743
DpnI	GATC	7 cut(s)	855, 885, 1053, 1066, 1515, 1728, 1797
DpnII	GATC	7 cut(s)	853, 883, 1051, 1064, 1513, 1726, 1795
DraI	TTTAAA	2 cut(s)	441, 552
DraIII	CACNNNGTG	3 cut(s)	82, 121, 1736
DrdI	GACNNNNNNGTC	1 cut(s)	344
DriI	GACNNNNNGTC	1 cut(s)	1606
DseDI	GACNNNNNNGTC	1 cut(s)	344
Eam1104I	CTCTTC	2 cut(s)	618, 1836
Eam1105I	GACNNNNNGTC	1 cut(s)	1606
EarI	CTCTTC	2 cut(s)	618, 1836
EciI	GGCGGA	2 cut(s)	558, 1148
Eco130I	CCWWGG	3 cut(s)	964, 1128, 1232
Eco24I	GRGCYC	1 cut(s)	297
Eco47I	GGWCC	2 cut(s)	378, 1567
Eco57I	CTGAAG	8 cut(s)	117, 528, 897, 932, 969, 1236, 1675, 1899
Eco88I	CYCGRG	1 cut(s)	468
EcoNI	CCTNNNNNAGG	1 cut(s)	1188
EcoO109I	RGGNCCY	1 cut(s)	1567
EcoRII	CCWGG	5 cut(s)	87, 866, 1569, 1922, 2088
EcoT14I	CCWWGG	3 cut(s)	964, 1128, 1232
EcoT22I	ATGCAT	1 cut(s)	1292
EcoT38I	GRGCYC	1 cut(s)	297
ErhI	CCWWGG	3 cut(s)	964, 1128, 1232
FaqI	GGGAC	3 cut(s)	391, 1279, 1548
FauI	CCCGC	1 cut(s)	1925
FbaI	TGATCA	2 cut(s)	883, 1513
FblI	GTMKAC	3 cut(s)	329, 1318, 2085
Fnu4HI	GCNGC	2 cut(s)	1544, 1773
FriOI	GRGCYC	1 cut(s)	297
Fsp4HI	GCNGC	2 cut(s)	1544, 1773
FspBI	CTAG	5 cut(s)	1611, 1709, 1799, 1887, 2124
GluI	GCNGC	2 cut(s)	1544, 1773
GsaI	CCCAGC	1 cut(s)	378
GsuI	CTGGAG	1 cut(s)	71
HaeIII	GGCC	1 cut(s)	467
HapII	CCGG	1 cut(s)	287
HgaI	GACGC	2 cut(s)	1326, 1382
HincII	GTYRAC	3 cut(s)	693, 1319, 1372
HindII	GTYRAC	3 cut(s)	693, 1319, 1372
HindIII	AAGCTT	2 cut(s)	1579, 2028
HinfI	GANTC	9 cut(s)	32, 109, 326, 452, 488, 565, 760, 953, 1112
HpaII	CCGG	1 cut(s)	287
HphI	GGTGA	1 cut(s)	1150
Hpy166II	GTNNAC	7 cut(s)	196, 330, 693, 1162, 1319, 1372, 2086
Hpy8I	GTNNAC	7 cut(s)	196, 330, 693, 1162, 1319, 1372, 2086
Hpy99I	CGWCG	2 cut(s)	717, 1342
HpyAV	CCTTC	4 cut(s)	141, 907, 1699, 1850
HpyCH4III	ACNGT	7 cut(s)	119, 424, 430, 924, 1316, 1468, 1904
HpyCH4IV	ACGT	1 cut(s)	712
HpyF3I	CTNAG	9 cut(s)	171, 391, 843, 857, 975, 1061, 1068, 1499, 1743
HpySE526I	ACGT	1 cut(s)	712
Ksp22I	TGATCA	2 cut(s)	883, 1513
Kzo9I	GATC	7 cut(s)	853, 883, 1051, 1064, 1513, 1726, 1795
LguI	GCTCTTC	1 cut(s)	618
LmnI	GCTCC	3 cut(s)	90, 605, 1242
Lsp1109I	GCAGC	2 cut(s)	1530, 1759
LweI	GCATC	9 cut(s)	74, 988, 1035, 1069, 1252, 1324, 1339, 1564, 1663
MabI	ACCWGGT	1 cut(s)	866
MaeI	CTAG	5 cut(s)	1611, 1709, 1799, 1887, 2124
MaeII	ACGT	1 cut(s)	712
MaeIII	GTNAC	5 cut(s)	424, 805, 943, 1174, 1753
MalI	GATC	7 cut(s)	855, 885, 1053, 1066, 1515, 1728, 1797
MboI	GATC	7 cut(s)	853, 883, 1051, 1064, 1513, 1726, 1795
MflI	RGATCY	1 cut(s)	1064
MhlI	GDGCHC	2 cut(s)	87, 297
MlyI	GAGTC	4 cut(s)	118, 335, 461, 559
MmeI	TCCRAC	3 cut(s)	63, 1290, 1638
Mph1103I	ATGCAT	1 cut(s)	1292
MroXI	GAANNNNTTC	2 cut(s)	273, 541
MseI	TTAA	5 cut(s)	440, 551, 2006, 2061, 2112
MslI	CAYNNNNRTG	2 cut(s)	117, 812
MspCI	CTTAAG	1 cut(s)	2060
MspI	CCGG	1 cut(s)	287
MspR9I	CCNGG	5 cut(s)	89, 868, 1571, 1924, 2090
MvaI	CCWGG	5 cut(s)	89, 868, 1571, 1924, 2090
NdeII	GATC	7 cut(s)	853, 883, 1051, 1064, 1513, 1726, 1795
NlaIV	GGNNCC	2 cut(s)	379, 1238
NmeAIII	GCCGAG	2 cut(s)	1876, 1968
NmuCI	GTSAC	2 cut(s)	805, 1753
NsiI	ATGCAT	1 cut(s)	1292
NspI	RCATGY	5 cut(s)	15, 96, 817, 1294, 1870
PaeI	GCATGC	2 cut(s)	15, 96
PagI	TCATGA	2 cut(s)	52, 2136
PciSI	GCTCTTC	1 cut(s)	618
PdmI	GAANNNNTTC	2 cut(s)	273, 541
PfeI	GAWTC	5 cut(s)	32, 488, 760, 953, 1112
PflMI	CCANNNNNTGG	1 cut(s)	1736
PfoI	TCCNGGA	1 cut(s)	1569
PkrI	GCNGC	2 cut(s)	1545, 1774
PleI	GAGTC	4 cut(s)	117, 334, 460, 559
PpsI	GAGTC	4 cut(s)	117, 334, 460, 559
PpuMI	RGGWCCY	1 cut(s)	1567
PshAI	GACNNNNGTC	1 cut(s)	1887
Psp5II	RGGWCCY	1 cut(s)	1567
Psp6I	CCWGG	5 cut(s)	87, 866, 1569, 1922, 2088
PspFI	CCCAGC	1 cut(s)	374
PspGI	CCWGG	5 cut(s)	87, 866, 1569, 1922, 2088
PspN4I	GGNNCC	2 cut(s)	379, 1238
PspPI	GGNCC	3 cut(s)	378, 466, 1567
PspPPI	RGGWCCY	1 cut(s)	1567
PstI	CTGCAG	3 cut(s)	487, 1275, 1762
PsuI	RGATCY	1 cut(s)	1064
RsaI	GTAC	5 cut(s)	421, 576, 739, 909, 921
RsaNI	GTAC	5 cut(s)	420, 575, 738, 908, 920
RseI	CAYNNNNRTG	2 cut(s)	117, 812
SalI	GTCGAC	1 cut(s)	1317
SapI	GCTCTTC	1 cut(s)	618
SaqAI	TTAA	5 cut(s)	440, 551, 2006, 2061, 2112
SatI	GCNGC	2 cut(s)	1544, 1773
Sau3AI	GATC	7 cut(s)	853, 883, 1051, 1064, 1513, 1726, 1795
Sau96I	GGNCC	3 cut(s)	378, 466, 1567
ScaI	AGTACT	1 cut(s)	421
SchI	GAGTC	4 cut(s)	118, 335, 461, 559
ScrFI	CCNGG	5 cut(s)	89, 868, 1571, 1924, 2090
SduI	GDGCHC	2 cut(s)	87, 297
SexAI	ACCWGGT	1 cut(s)	866
SfaNI	GCATC	9 cut(s)	74, 988, 1035, 1069, 1252, 1324, 1339, 1564, 1663
SfcI	CTRYAG	5 cut(s)	45, 411, 483, 1271, 1758
SinI	GGWCC	2 cut(s)	378, 1567
SmiMI	CAYNNNNRTG	2 cut(s)	117, 812
SmlI	CTYRAG	2 cut(s)	1083, 2060
SmoI	CTYRAG	2 cut(s)	1083, 2060
SpeI	ACTAGT	1 cut(s)	1886
SphI	GCATGC	2 cut(s)	15, 96
SsiI	CCGC	7 cut(s)	181, 569, 591, 721, 1013, 1133, 1918
SspMI	CTAG	5 cut(s)	1611, 1709, 1799, 1887, 2124
StyD4I	CCNGG	5 cut(s)	87, 866, 1569, 1922, 2088
StyI	CCWWGG	3 cut(s)	964, 1128, 1232
TaaI	ACNGT	7 cut(s)	119, 424, 430, 924, 1316, 1468, 1904
TaiI	ACGT	1 cut(s)	715
TaqI	TCGA	4 cut(s)	1115, 1318, 1340, 1401
TatI	WGTACW	2 cut(s)	419, 737
TfiI	GAWTC	5 cut(s)	32, 488, 760, 953, 1112
Tru1I	TTAA	5 cut(s)	440, 551, 2006, 2061, 2112
Tru9I	TTAA	5 cut(s)	440, 551, 2006, 2061, 2112
TscAI	CASTG	8 cut(s)	198, 304, 628, 847, 979, 1699, 1762, 1909
TseFI	GTSAC	2 cut(s)	805, 1753
TseI	GCWGC	2 cut(s)	1543, 1772
Tsp45I	GTSAC	2 cut(s)	805, 1753
TspDTI	ATGAA	9 cut(s)	69, 599, 781, 798, 1137, 1317, 1572, 1854, 2153
TspGWI	ACGGA	2 cut(s)	919, 1747
TspRI	CASTG	8 cut(s)	198, 304, 628, 847, 979, 1699, 1762, 1909
Van91I	CCANNNNNTGG	1 cut(s)	1736
Vha464I	CTTAAG	1 cut(s)	2060
VpaK11BI	GGWCC	2 cut(s)	378, 1567
XagI	CCTNNNNNAGG	1 cut(s)	1188
XapI	RAATTY	8 cut(s)	150, 442, 750, 772, 786, 847, 1450, 1820
XceI	RCATGY	5 cut(s)	15, 96, 817, 1294, 1870
XmiI	GTMKAC	3 cut(s)	329, 1318, 2085
XmnI	GAANNNNTTC	2 cut(s)	273, 541
XspI	CTAG	5 cut(s)	1611, 1709, 1799, 1887, 2124
ZrmI	AGTACT	1 cut(s)	421
Zsp2I	ATGCAT	1 cut(s)	1292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.