Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0009426

Physical Location & Seq

Genomic Coordinates Reverse (-)

1236491 .. 1239543

Gene Structure 3053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g01840.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGACCTATATCAGTCACAGTTTTCCTCAACACCGACAATATCTATGTGCTGGTGCATGGATCCTGATGCAAGGGCACCCAGAAAACATTAACAGCGTAAACTTAGCACGTGTCTTGAGAGAGTTTTCTCCTGAGGAAGTAACATCTAATATTTATACAATGGTGGATGTTCTGCTTCATCAAATTCAGTTGGAACTTCAGCATGGCCATTCTTTTCAGGATCTTTTATTGAAAGCTTGTGCAAACCTAGCTTTTTATATTTGGACCCATGAGTTGCTCCCTTTGGATATTTTGCTCCTGGCACTTATTGATCGTGACGATGACCCCCATGCTTTGCATATCGTGATTAGTCTACTCGATAGGCAAGAACTTCAACAGAGGGTGAAACTATATTGTGCGAATCGAGGTCCCCCTGAACACTGGCTTTTCTCTGGACCCTTTAAGCGAGTTGAATTGCAAAAGGCCCTTGGGAATCATCTATCCTGGAAGGACAGGTATCCTACTTTCTTCGATGATATTGCAGGGCGTTTGCTCCCAGTCATTCCGTTGATAATTTATAGACTAATTGAAAATGATGCCATAGATTCAGCTGAAAGAATTCTGGTCATGTATTCTACATTTCTTAAATACCACCCTTTAAGATTTACATTTGTTCGTGACATACTTGCATATTTTTATGGCCATCTTCCCGGAAAGCTCATTGTCCGAATATTGAATGGACTCGAAGTCAACAAGATCCCATTTTCTGAGTCATTCCCGGTGCATATGAATTTATCAAATTCCACCATGTGCCCACCTGCCGATTACTTTGCAACTCTCTTACTGGGACTAGTGAATAATGTCATTCCTCCATTGCATAACAACTCAAAATCTGGAGCGAATGATGCTTTAAATAATTCAATGCGTGCCCCACCTAACAAGACTCCTCCAACGTCGCAGTCTGGGCAAGCAAATGTTTCTGATGGCCAAAAAGCATTCTTTCAAATTCAGGATCGAGGCACATATACTCAGCTGGTTCTTGAAACAGCAGTCATTGAACTGCTCTCTCTTCCTGTATCTTCATCCCAGATTGTATCATCATTGGTTCAGATTGTCATCAATATACAACCAACATTAATTCAATCCAGCAATGGCCTGCACGGAGCTCCAAATGGTGTTGGGCAAGGCTCTGTTTTACCAACATCCCCTTCGGGCGGAAGCACAGATTCCTTGGGCACGAGCAGGTCAGCTGCTTCAGGGTCAGGAATAAATGCATCTAACTTTGTTTCTCGAAGTGGTTATACATGCCAACAGTTGTCTTGCTTCAACAAGGGTAGATTGATCCAAGCATGTGGTCTTCTACTGGCTCAACTGCCTCCTGATTTTCATATGCAACTCTATCTAGAGGCATCACGTATAATAAAAGAAACATGGTGGCTCACTGATGGCAAAGGGTCAATGGGAGAAGTAGACTCTGCTGTCGGTTATGCTTTGTTGGATCCAACATGGGCTGCTCAAGACAATACCTCGACCGCCATTGGTAATATTGTTGCCCTGCTTCATTCGTTTTTCAGTAACCTCCCACATGAGTGGCTAGAAGGGACCCATCTTATCATCAAACATCTCAGGCCAGTGACTTCAGTTGCAATGTTGAGAATAGCATTCCGGATAATGGGTCCCTTGCTCCCTAAACTAGCCACTGCGCACGCCCTCTTCAGTAAGGCTCTGTCGTTGATTTTAAGTATGATGGTAGATGTCTTCGGGAAGAATGTACAGCCTCCAATTCCAGTCAAGCCATTAGAAATAGCAGATATAATTGACTTCTTCCATCACATCGTCCACTATGAAGGGCAGGGAGGTCCTGTGCAGGCTAACAGCAAGCCCAGACCAGAGGTTTTAGCTCTCTGTGGAAGAGCCGCGGAAAGTCTGCGTCCGGACATACAACACCTTCTTTCCCACTTAAAACCCGACACGAATTCTTCCATTTACGCTGCTACCCATCCCAAGTTGAACCAGAATTCGTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016592 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med23

Protein Analysis

669

Amino Acids

73.89

Weight (kDa)

6.73

Isoelectric Point (pI)

38.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23230 AT1G23230 AT1G23230
fragaria_vesca	FvH4_4g33860 FvH4_4g33860 FvH4_4g33860
malus_domestica	MD13G1030100.v1.1 MD16G1020900.v1.1
prunus_persica	Prupe.1G331400_v2.0.a1 Prupe.1G331400_v2.0.a1
pyrus_communis	pycom13g01840 pycom16g01870
rosa_chinensis	RchiOBHm_Chr4g0443371
rosa_laevigata	RLG00000005935
rosa_multiflora	Rmu_ssc0000122.1_g000011
rosa_roxburghii	Rroxscaffold_5G00383930
rosa_rugosa	Rorug04G0345700
rosa_samantha	Rh4AG401000 Rh4BG412500 Rh4CG427900 Rh4DG408000
rosa_wichuraiana	Rw4G034580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	805
AasI	GACNNNNNNGTC	1 cut(s)	1457
Acc16I	TGCGCA	1 cut(s)	1683
Acc36I	ACCTGC	2 cut(s)	805, 1212
AccB1I	GGYRCC	1 cut(s)	75
AccI	GTMKAC	2 cut(s)	352, 1449
AccII	CGCG	1 cut(s)	1898
AccIII	TCCGGA	2 cut(s)	1644, 1912
AciI	CCGC	4 cut(s)	1194, 1512, 1896, 1898
AclWI	GGATC	8 cut(s)	55, 68, 228, 730, 999, 1315, 1472, 1485
AcoI	YGGCCR	3 cut(s)	205, 679, 964
AcsI	RAATTY	7 cut(s)	183, 597, 769, 778, 984, 1954, 1996
AcuI	CTGAAG	4 cut(s)	182, 1218, 1602, 1678
AcvI	CACGTG	1 cut(s)	110
AdeI	CACNNNGTG	1 cut(s)	789
AfaI	GTAC	1 cut(s)	1752
AfiI	CCNNNNNNNGG	2 cut(s)	1193, 1651
AflIII	ACRYGT	1 cut(s)	109
AhdI	GACNNNNNGTC	1 cut(s)	725
AhlI	ACTAGT	1 cut(s)	829
AjnI	CCWGG	2 cut(s)	297, 482
AjuI	GAANNNNNNNTTGG	2 cut(s)	1171, 1203
AleI	CACNNNNGTG	1 cut(s)	1567
AluBI	AGCT	8 cut(s)	236, 251, 590, 697, 1012, 1145, 1229, 1880
AluI	AGCT	8 cut(s)	236, 251, 590, 697, 1012, 1145, 1229, 1880
Alw21I	GWGCWC	1 cut(s)	1147
AlwI	GGATC	8 cut(s)	55, 68, 228, 730, 999, 1315, 1472, 1485
Aor13HI	TCCGGA	2 cut(s)	1644, 1912
AoxI	GGCC	6 cut(s)	205, 462, 679, 964, 1132, 1607
ApeKI	GCWGC	3 cut(s)	1229, 1490, 1970
ApoI	RAATTY	7 cut(s)	183, 597, 769, 778, 984, 1954, 1996
AseI	ATTAAT	1 cut(s)	1115
Asp700I	GAANNNNTTC	1 cut(s)	597
AspLEI	GCGC	1 cut(s)	1684
AspS9I	GGNCC	7 cut(s)	264, 407, 434, 463, 1581, 1655, 1838
AsuC2I	CCSGG	2 cut(s)	690, 758
AsuHPI	GGTGA	1 cut(s)	394
AvaII	GGWCC	6 cut(s)	264, 407, 434, 1581, 1655, 1838
AxyI	CCTNAGG	1 cut(s)	132
BaeGI	GKGCMC	4 cut(s)	78, 794, 910, 1217
BalI	TGGCCA	3 cut(s)	207, 681, 966
BamHI	GGATCC	2 cut(s)	60, 1477
BanI	GGYRCC	1 cut(s)	75
BanII	GRGCYC	1 cut(s)	1147
BarI	GAAGNNNNNNTAC	2 cut(s)	1264, 1296
BauI	CACGAG	1 cut(s)	1216
BbrPI	CACGTG	1 cut(s)	110
BbsI	GAAGAC	2 cut(s)	1328, 1729
Bbv12I	GWGCWC	1 cut(s)	1147
BbvI	GCAGC	3 cut(s)	1216, 1477, 1957
BccI	CCATC	7 cut(s)	690, 956, 1418, 1593, 1720, 1815, 1986
BcgI	CGANNNNNNTGC	4 cut(s)	500, 534, 791, 825
BciT130I	CCWGG	2 cut(s)	299, 484
BciVI	GTATCC	1 cut(s)	507
BcnI	CCSGG	2 cut(s)	690, 758
BcuI	ACTAGT	1 cut(s)	829
BfaI	CTAG	5 cut(s)	248, 830, 1382, 1574, 1673
BfuAI	ACCTGC	2 cut(s)	805, 1212
BfuI	GTATCC	1 cut(s)	507
BisI	GCNGC	4 cut(s)	1230, 1491, 1896, 1971
BlsI	GCNGC	4 cut(s)	1231, 1492, 1897, 1972
Bme1390I	CCNGG	4 cut(s)	299, 484, 690, 758
Bme18I	GGWCC	6 cut(s)	264, 407, 434, 1581, 1655, 1838
BmeRI	GACNNNNNGTC	1 cut(s)	725
BmgT120I	GGNCC	7 cut(s)	264, 407, 434, 463, 1581, 1655, 1838
BmrFI	CCNGG	4 cut(s)	299, 484, 690, 758
BmrI	ACTGGG	2 cut(s)	530, 833
BmsI	GCATC	5 cut(s)	57, 565, 874, 1262, 1397
BmuI	ACTGGG	2 cut(s)	530, 833
BpiI	GAAGAC	2 cut(s)	1328, 1729
BpmI	CTGGAG	1 cut(s)	894
BpuEI	CTTGAG	2 cut(s)	136, 1479
BpuMI	CCSGG	2 cut(s)	690, 758
BsaAI	YACGTR	2 cut(s)	110, 1394
BsaBI	GATNNNNATC	1 cut(s)	1094
BsaJI	CCNNGG	3 cut(s)	466, 1209, 1896
BsaWI	WCCGGW	2 cut(s)	1644, 1912
BsaXI	ACNNNNNCTCC	2 cut(s)	1827, 1857
Bsc4I	CCNNNNNNNGG	2 cut(s)	1193, 1651
Bse1I	ACTGG	6 cut(s)	425, 536, 828, 1347, 1610, 1766
Bse21I	CCTNAGG	1 cut(s)	132
Bse3DI	GCAATG	3 cut(s)	851, 1135, 1632
Bse8I	GATNNNNATC	1 cut(s)	1094
BseAI	TCCGGA	2 cut(s)	1644, 1912
BseBI	CCWGG	2 cut(s)	299, 484
BseDI	CCNNGG	3 cut(s)	466, 1209, 1896
BseGI	GGATG	4 cut(s)	172, 1061, 1181, 1978
BseJI	GATNNNNATC	1 cut(s)	1094
BseLI	CCNNNNNNNGG	2 cut(s)	1193, 1651
BseMI	GCAATG	3 cut(s)	851, 1135, 1632
BseMII	CTCAG	4 cut(s)	123, 738, 1022, 1618
BseNI	ACTGG	6 cut(s)	425, 536, 828, 1347, 1610, 1766
BseRI	GAGGAG	1 cut(s)	915
BseSI	GKGCMC	4 cut(s)	78, 794, 910, 1217
BseXI	GCAGC	3 cut(s)	1216, 1477, 1957
BsgI	GTGCAG	2 cut(s)	1121, 1865
Bsh1236I	CGCG	1 cut(s)	1898
Bsh1285I	CGRYCG	1 cut(s)	1512
BshFI	GGCC	6 cut(s)	207, 464, 681, 966, 1134, 1609
BshNI	GGYRCC	1 cut(s)	75
BsiEI	CGRYCG	1 cut(s)	1512
BsiHKAI	GWGCWC	1 cut(s)	1147
BsiSI	CCGG	4 cut(s)	690, 758, 1645, 1913
BslFI	GGGAC	4 cut(s)	393, 840, 1594, 1641
BslI	CCNNNNNNNGG	2 cut(s)	1193, 1651
BsmFI	GGGAC	4 cut(s)	393, 840, 1594, 1641
BsmI	GAATGC	2 cut(s)	974, 1640
BsnI	GGCC	6 cut(s)	207, 464, 681, 966, 1134, 1609
Bsp1286I	GDGCHC	5 cut(s)	78, 794, 910, 1147, 1217
Bsp13I	TCCGGA	2 cut(s)	1644, 1912
Bsp1407I	TGTACA	1 cut(s)	1750
Bsp143I	GATC	7 cut(s)	60, 220, 310, 735, 991, 1320, 1477
BspACI	CCGC	4 cut(s)	1194, 1512, 1896, 1898
BspANI	GGCC	6 cut(s)	207, 464, 681, 966, 1134, 1609
BspCNI	CTCAG	4 cut(s)	124, 739, 1021, 1617
BspEI	TCCGGA	2 cut(s)	1644, 1912
BspFNI	CGCG	1 cut(s)	1898
BspMI	ACCTGC	2 cut(s)	805, 1212
BspPI	GGATC	8 cut(s)	55, 68, 228, 730, 999, 1315, 1472, 1485
BspQI	GCTCTTC	1 cut(s)	1885
BspT107I	GGYRCC	1 cut(s)	75
BsrDI	GCAATG	3 cut(s)	851, 1135, 1632
BsrGI	TGTACA	1 cut(s)	1750
BsrI	ACTGG	6 cut(s)	425, 536, 828, 1347, 1610, 1766
BssECI	CCNNGG	3 cut(s)	466, 1209, 1896
BssMI	GATC	7 cut(s)	60, 220, 310, 735, 991, 1320, 1477
BssSI	CACGAG	1 cut(s)	1216
BssT1I	CCWWGG	2 cut(s)	466, 1209
Bst2BI	CACGAG	1 cut(s)	1216
Bst2UI	CCWGG	2 cut(s)	299, 484
Bst4CI	ACNGT	2 cut(s)	20, 1293
Bst6I	CTCTTC	3 cut(s)	1053, 1697, 1885
BstAUI	TGTACA	1 cut(s)	1750
BstBAI	YACGTR	2 cut(s)	110, 1394
BstC8I	GCNNGC	6 cut(s)	906, 948, 1136, 1686, 1848, 1859
BstDEI	CTNAG	5 cut(s)	103, 132, 747, 1008, 1604
BstDSI	CCRYGG	1 cut(s)	1896
BstF5I	GGATG	4 cut(s)	172, 1061, 1181, 1978
BstFNI	CGCG	1 cut(s)	1898
BstHHI	GCGC	1 cut(s)	1684
BstKTI	GATC	7 cut(s)	63, 223, 313, 738, 994, 1323, 1480
BstMBI	GATC	7 cut(s)	60, 220, 310, 735, 991, 1320, 1477
BstMCI	CGRYCG	1 cut(s)	1512
BstMWI	GCNNNNNNNGC	3 cut(s)	248, 884, 943
BstNI	CCWGG	2 cut(s)	299, 484
BstNSI	RCATGY	2 cut(s)	1287, 1332
BstSCI	CCNGG	4 cut(s)	297, 482, 688, 756
BstSLI	GKGCMC	4 cut(s)	78, 794, 910, 1217
BstUI	CGCG	1 cut(s)	1898
BstV1I	GCAGC	3 cut(s)	1216, 1477, 1957
BstV2I	GAAGAC	2 cut(s)	1328, 1729
BstX2I	RGATCY	4 cut(s)	60, 220, 735, 1477
BstXI	CCANNNNNNTGG	2 cut(s)	1331, 1569
BstYI	RGATCY	4 cut(s)	60, 220, 735, 1477
Bsu36I	CCTNAGG	1 cut(s)	132
BsuI	GTATCC	1 cut(s)	507
BsuRI	GGCC	6 cut(s)	207, 464, 681, 966, 1134, 1609
BtgI	CCRYGG	1 cut(s)	1896
BtsCI	GGATG	4 cut(s)	172, 1061, 1181, 1978
BtsI	GCAGTG	1 cut(s)	1677
BtsIMutI	CAGTG	4 cut(s)	418, 1419, 1617, 1677
BveI	ACCTGC	2 cut(s)	805, 1212
Cac8I	GCNNGC	6 cut(s)	906, 948, 1136, 1686, 1848, 1859
CfoI	GCGC	1 cut(s)	1684
Cfr13I	GGNCC	7 cut(s)	264, 407, 434, 463, 1581, 1655, 1838
Cfr42I	CCGCGG	1 cut(s)	1899
CseI	GACGC	1 cut(s)	1898
Csp6I	GTAC	1 cut(s)	1751
CviQI	GTAC	1 cut(s)	1751
DdeI	CTNAG	5 cut(s)	103, 132, 747, 1008, 1604
DpnI	GATC	7 cut(s)	62, 222, 312, 737, 993, 1322, 1479
DpnII	GATC	7 cut(s)	60, 220, 310, 735, 991, 1320, 1477
DraI	TTTAAA	1 cut(s)	891
DraIII	CACNNNGTG	1 cut(s)	789
DrdI	GACNNNNNNGTC	1 cut(s)	1457
DriI	GACNNNNNGTC	1 cut(s)	725
DseDI	GACNNNNNNGTC	1 cut(s)	1457
EaeI	YGGCCR	3 cut(s)	205, 679, 964
Eam1104I	CTCTTC	3 cut(s)	1053, 1697, 1885
Eam1105I	GACNNNNNGTC	1 cut(s)	725
EarI	CTCTTC	3 cut(s)	1053, 1697, 1885
EciI	GGCGGA	1 cut(s)	1209
Ecl136II	GAGCTC	1 cut(s)	1145
Eco130I	CCWWGG	2 cut(s)	466, 1209
Eco24I	GRGCYC	1 cut(s)	1147
Eco47I	GGWCC	6 cut(s)	264, 407, 434, 1581, 1655, 1838
Eco53kI	GAGCTC	1 cut(s)	1145
Eco57I	CTGAAG	4 cut(s)	182, 1218, 1602, 1678
Eco72I	CACGTG	1 cut(s)	110
Eco81I	CCTNAGG	1 cut(s)	132
EcoICRI	GAGCTC	1 cut(s)	1145
EcoO109I	RGGNCCY	5 cut(s)	407, 463, 1581, 1655, 1838
EcoRI	GAATTC	3 cut(s)	597, 1954, 1996
EcoRII	CCWGG	2 cut(s)	297, 482
EcoT14I	CCWWGG	2 cut(s)	466, 1209
EcoT22I	ATGCAT	1 cut(s)	1255
EcoT38I	GRGCYC	1 cut(s)	1147
ErhI	CCWWGG	2 cut(s)	466, 1209
FaqI	GGGAC	4 cut(s)	393, 840, 1594, 1641
FauNDI	CATATG	2 cut(s)	765, 1368
FblI	GTMKAC	2 cut(s)	352, 1449
Fnu4HI	GCNGC	4 cut(s)	1230, 1491, 1896, 1971
FokI	GGATG	4 cut(s)	179, 1048, 1168, 1965
FriOI	GRGCYC	1 cut(s)	1147
Fsp4HI	GCNGC	4 cut(s)	1230, 1491, 1896, 1971
FspBI	CTAG	5 cut(s)	248, 830, 1382, 1574, 1673
FspI	TGCGCA	1 cut(s)	1683
GlaI	GCGC	1 cut(s)	1683
GluI	GCNGC	4 cut(s)	1230, 1491, 1896, 1971
GsuI	CTGGAG	1 cut(s)	894
HaeIII	GGCC	6 cut(s)	207, 464, 681, 966, 1134, 1609
HapII	CCGG	4 cut(s)	690, 758, 1645, 1913
HgaI	GACGC	1 cut(s)	1898
HhaI	GCGC	1 cut(s)	1684
Hin6I	GCGC	1 cut(s)	1682
HinP1I	GCGC	1 cut(s)	1682
HincII	GTYRAC	1 cut(s)	730
HindII	GTYRAC	1 cut(s)	730
HindIII	AAGCTT	1 cut(s)	234
HinfI	GANTC	8 cut(s)	400, 472, 584, 720, 749, 922, 1205, 1451
HpaII	CCGG	4 cut(s)	690, 758, 1645, 1913
HphI	GGTGA	1 cut(s)	394
Hpy166II	GTNNAC	5 cut(s)	100, 353, 730, 1450, 1819
Hpy188I	TCNGA	4 cut(s)	707, 748, 961, 1089
Hpy8I	GTNNAC	5 cut(s)	100, 353, 730, 1450, 1819
Hpy99I	CGWCG	2 cut(s)	937, 2005
HpyAV	CCTTC	5 cut(s)	481, 1197, 1571, 1820, 1937
HpyCH4III	ACNGT	2 cut(s)	20, 1293
HpyCH4IV	ACGT	3 cut(s)	109, 932, 1393
HpyF10VI	GCNNNNNNNGC	3 cut(s)	248, 884, 943
HpyF3I	CTNAG	5 cut(s)	103, 132, 747, 1008, 1604
HpySE526I	ACGT	3 cut(s)	109, 932, 1393
HspAI	GCGC	1 cut(s)	1682
KflI	GGGWCCC	2 cut(s)	1581, 1655
Kpn2I	TCCGGA	2 cut(s)	1644, 1912
KspI	CCGCGG	1 cut(s)	1899
Kzo9I	GATC	7 cut(s)	60, 220, 310, 735, 991, 1320, 1477
LguI	GCTCTTC	1 cut(s)	1885
LmnI	GCTCC	7 cut(s)	282, 300, 537, 875, 1142, 1150, 1668
Lsp1109I	GCAGC	3 cut(s)	1216, 1477, 1957
LweI	GCATC	5 cut(s)	57, 565, 874, 1262, 1397
MaeI	CTAG	5 cut(s)	248, 830, 1382, 1574, 1673
MaeII	ACGT	3 cut(s)	109, 932, 1393
MaeIII	GTNAC	6 cut(s)	14, 139, 314, 656, 1553, 1612
MalI	GATC	7 cut(s)	62, 222, 312, 737, 993, 1322, 1479
MboI	GATC	7 cut(s)	60, 220, 310, 735, 991, 1320, 1477
MflI	RGATCY	4 cut(s)	60, 220, 735, 1477
MhlI	GDGCHC	5 cut(s)	78, 794, 910, 1147, 1217
MlsI	TGGCCA	3 cut(s)	207, 681, 966
MluNI	TGGCCA	3 cut(s)	207, 681, 966
MlyI	GAGTC	4 cut(s)	714, 758, 916, 1445
MmeI	TCCRAC	4 cut(s)	171, 953, 1455, 1505
Mox20I	TGGCCA	3 cut(s)	207, 681, 966
Mph1103I	ATGCAT	1 cut(s)	1255
MroI	TCCGGA	2 cut(s)	1644, 1912
MroXI	GAANNNNTTC	1 cut(s)	597
MscI	TGGCCA	3 cut(s)	207, 681, 966
MseI	TTAA	8 cut(s)	90, 441, 624, 638, 890, 1115, 1718, 1940
MslI	CAYNNNNRTG	1 cut(s)	1567
Msp20I	TGGCCA	3 cut(s)	207, 681, 966
MspA1I	CMGCKG	4 cut(s)	590, 1012, 1229, 1898
MspI	CCGG	4 cut(s)	690, 758, 1645, 1913
MspR9I	CCNGG	4 cut(s)	299, 484, 690, 758
Mva1269I	GAATGC	2 cut(s)	974, 1640
MvaI	CCWGG	2 cut(s)	299, 484
MvnI	CGCG	1 cut(s)	1898
MwoI	GCNNNNNNNGC	3 cut(s)	248, 884, 943
NciI	CCSGG	2 cut(s)	690, 758
NdeI	CATATG	2 cut(s)	765, 1368
NdeII	GATC	7 cut(s)	60, 220, 310, 735, 991, 1320, 1477
NmuCI	GTSAC	4 cut(s)	14, 314, 656, 1612
NsbI	TGCGCA	1 cut(s)	1683
NsiI	ATGCAT	1 cut(s)	1255
NspI	RCATGY	2 cut(s)	1287, 1332
OliI	CACNNNNGTG	1 cut(s)	1567
PaqCI	CACCTGC	1 cut(s)	805
PciSI	GCTCTTC	1 cut(s)	1885
PctI	GAATGC	2 cut(s)	974, 1640
PdmI	GAANNNNTTC	1 cut(s)	597
PfeI	GAWTC	4 cut(s)	400, 472, 584, 1205
PfoI	TCCNGGA	2 cut(s)	482, 688
PkrI	GCNGC	4 cut(s)	1231, 1492, 1897, 1972
PleI	GAGTC	4 cut(s)	714, 757, 916, 1445
PmaCI	CACGTG	1 cut(s)	110
PmlI	CACGTG	1 cut(s)	110
PpsI	GAGTC	4 cut(s)	714, 757, 916, 1445
Ppu21I	YACGTR	2 cut(s)	110, 1394
PpuMI	RGGWCCY	4 cut(s)	407, 1581, 1655, 1838
PshBI	ATTAAT	1 cut(s)	1115
Psp124BI	GAGCTC	1 cut(s)	1147
Psp5II	RGGWCCY	4 cut(s)	407, 1581, 1655, 1838
Psp6I	CCWGG	2 cut(s)	297, 482
PspCI	CACGTG	1 cut(s)	110
PspGI	CCWGG	2 cut(s)	297, 482
PspPI	GGNCC	7 cut(s)	264, 407, 434, 463, 1581, 1655, 1838
PspPPI	RGGWCCY	4 cut(s)	407, 1581, 1655, 1838
PsuI	RGATCY	4 cut(s)	60, 220, 735, 1477
PvuII	CAGCTG	3 cut(s)	590, 1012, 1229
RsaI	GTAC	1 cut(s)	1752
RsaNI	GTAC	1 cut(s)	1751
RseI	CAYNNNNRTG	1 cut(s)	1567
SacI	GAGCTC	1 cut(s)	1147
SacII	CCGCGG	1 cut(s)	1899
SapI	GCTCTTC	1 cut(s)	1885
SaqAI	TTAA	8 cut(s)	90, 441, 624, 638, 890, 1115, 1718, 1940
SatI	GCNGC	4 cut(s)	1230, 1491, 1896, 1971
Sau3AI	GATC	7 cut(s)	60, 220, 310, 735, 991, 1320, 1477
Sau96I	GGNCC	7 cut(s)	264, 407, 434, 463, 1581, 1655, 1838
SchI	GAGTC	4 cut(s)	714, 758, 916, 1445
ScrFI	CCNGG	4 cut(s)	299, 484, 690, 758
SduI	GDGCHC	5 cut(s)	78, 794, 910, 1147, 1217
SfaNI	GCATC	5 cut(s)	57, 565, 874, 1262, 1397
Sfr303I	CCGCGG	1 cut(s)	1899
SgrBI	CCGCGG	1 cut(s)	1899
SinI	GGWCC	6 cut(s)	264, 407, 434, 1581, 1655, 1838
SmiMI	CAYNNNNRTG	1 cut(s)	1567
SmlI	CTYRAG	2 cut(s)	115, 1494
SmoI	CTYRAG	2 cut(s)	115, 1494
SpeI	ACTAGT	1 cut(s)	829
SsiI	CCGC	4 cut(s)	1194, 1512, 1896, 1898
SspI	AATATT	3 cut(s)	151, 711, 1525
SspMI	CTAG	5 cut(s)	248, 830, 1382, 1574, 1673
SstI	GAGCTC	1 cut(s)	1147
StyD4I	CCNGG	4 cut(s)	297, 482, 688, 756
StyI	CCWWGG	2 cut(s)	466, 1209
TaaI	ACNGT	2 cut(s)	20, 1293
TaiI	ACGT	3 cut(s)	112, 935, 1396
TaqI	TCGA	7 cut(s)	357, 403, 510, 723, 994, 1270, 1508
TatI	WGTACW	1 cut(s)	1750
TauI	GCSGC	1 cut(s)	1898
TfiI	GAWTC	4 cut(s)	400, 472, 584, 1205
Tru1I	TTAA	8 cut(s)	90, 441, 624, 638, 890, 1115, 1718, 1940
Tru9I	TTAA	8 cut(s)	90, 441, 624, 638, 890, 1115, 1718, 1940
TscAI	CASTG	4 cut(s)	425, 1426, 1617, 1684
TseFI	GTSAC	4 cut(s)	14, 314, 656, 1612
TseI	GCWGC	3 cut(s)	1229, 1490, 1970
Tsp45I	GTSAC	4 cut(s)	14, 314, 656, 1612
TspDTI	ATGAA	6 cut(s)	167, 782, 1050, 1355, 1529, 1839
TspGWI	ACGGA	2 cut(s)	534, 1155
TspRI	CASTG	4 cut(s)	425, 1426, 1617, 1684
VpaK11BI	GGWCC	6 cut(s)	264, 407, 434, 1581, 1655, 1838
VspI	ATTAAT	1 cut(s)	1115
XapI	RAATTY	7 cut(s)	183, 597, 769, 778, 984, 1954, 1996
XbaI	TCTAGA	1 cut(s)	1381
XceI	RCATGY	2 cut(s)	1287, 1332
XmiI	GTMKAC	2 cut(s)	352, 1449
XmnI	GAANNNNTTC	1 cut(s)	597
XspI	CTAG	5 cut(s)	248, 830, 1382, 1574, 1673
Zsp2I	ATGCAT	1 cut(s)	1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.