Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0009426

Physical Location & Seq

Genomic Coordinates Forward (+)

51773981 .. 51775974

Gene Structure 1994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0345700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1221 bp

ATGAATTCACTTGAAGTTCCCCTCCTCTGTTTCCTACTCTCTATTATTTTCATACCTAACTTCACTGCTTCCCAAATCTTATTTCAGGGGTTCAATTGGGAATCAGCAAAGAAGGGAGGATGGTACAACATCTTGAAGCAGTCTGCAGCTGAGCTAGCTGCTTCAGGAATTACACATGTTTGGCTTCCACCACCTTCTCATGCTTGTTCAGATGAAGGATACCTGCCTGGTAGGCTCTATGATCTCACATCAAAATATGGAAGCCAAGATGAATTGAAGGCACTGGTAAAAACCTACCATGACAATGGGATACAGAGCATAGCAGATATTGTTTTAAACCACAGATGTGCAGAGAAGAAAGATGAGAGAGGAATATTGTGCATTTTTGAAGGAGGAACACCCGATGATCGCCTTGATTGGGGCCCGTCTCTTATTTGCAGAGACGACACAGAGTTTTCTGATGGCAAGGGGAACAATGATACTGGAAAGAGCTGGGGTGGGGTACCTGACATTGATCACAACAACACAAGGGTCCAGAATGAGCTCTCGGATTGGATGAATTGGTTGAAGACCGAAATTGGGTTCAGCGGATGGCGATTTGATTTTGTTCTGGGATATGCTCTAGTGTTCATCAAGTTGTATGTGGCAAACACAAGGCCTAATTTCTCAGTAGGAGAGTTTTGGAATCCCCTTGCTAAGGGAAGTGATGGGAAACCCGAGTACAACCAGGACAACCATCGCAATGAGCTTGCTGGATGGATAAAGAATGCAGGAGGAGAGGTTACTGCATTTGATATTACAACTAAAGGGATACTTAACGCAGCTGTCCTAGGCGAACTGGGGAGGTTGAAGGACTCGAAGGGAGGGCCTCCTGGATTGATTGGAATATCGCCACGCAATAGTGTGACTTTCATAGACAATCATGATACCGGTTCCACACAAAGTGAGTGGCCATTTCCAACAGATAAAGTCATTCAGGGATATGCTTACATTCTTACTCATCCAGGGATCCCATCAATATTCTACGACCACTTCTTTGACTGGGACCGGGGCCTGAGAGTGGAGATCTCGAAACTCACTGCGATTAGGTCCAGGACTGGGATCAAACCCGACAGTGTGGTGCGTATCCTAGCAGCTGATCCAGATCTCTATGTAGCTTCCATAGATGACAAAATCATAATGAAGATTGGTCCAAGATATGAGGTTGGGGACCTTGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016592 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med23

Protein Analysis

406

Amino Acids

45.14

Weight (kDa)

5.26

Isoelectric Point (pI)

26.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Alpha-amylase	PF00128	56 - 119	4.3e-08	Alpha amylase, catalytic domain
Alpha-amyl_C2	PF07821	365 - 404	1.2e-12	Alpha-amylase C-terminal beta-sheet domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23230 AT1G23230 AT1G23230
fragaria_vesca	FvH4_4g33860 FvH4_4g33860 FvH4_4g33860
malus_domestica	MD13G1030100.v1.1 MD16G1020900.v1.1
prunus_persica	Prupe.1G331400_v2.0.a1 Prupe.1G331400_v2.0.a1
pyrus_communis	pycom13g01840 pycom16g01870
rosa_chinensis	RchiOBHm_Chr4g0443371
rosa_laevigata	RLG00000005935
rosa_multiflora	Rmu_ssc0000122.1_g000011
rosa_roxburghii	Rroxscaffold_5G00383930
rosa_rugosa	Rorug04G0345700
rosa_samantha	Rh4AG401000 Rh4BG412500 Rh4CG427900 Rh4DG408000
rosa_wichuraiana	Rw4G034580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	231
Acc65I	GGTACC	1 cut(s)	502
AccB1I	GGYRCC	1 cut(s)	502
AciI	CCGC	1 cut(s)	588
AclWI	GGATC	4 cut(s)	1003, 1016, 1109, 1133
AcoI	YGGCCR	1 cut(s)	950
AcsI	RAATTY	1 cut(s)	4
AcuI	CTGAAG	1 cut(s)	147
AdeI	CACNNNGTG	1 cut(s)	944
AfaI	GTAC	3 cut(s)	125, 504, 722
AfiI	CCNNNNNNNGG	5 cut(s)	418, 579, 697, 1060, 1098
AflIII	ACRYGT	1 cut(s)	175
AgeI	ACCGGT	1 cut(s)	929
AgsI	TTSAA	7 cut(s)	14, 94, 136, 277, 389, 568, 850
AjnI	CCWGG	5 cut(s)	226, 726, 871, 1003, 1091
AjuI	GAANNNNNNNTTGG	2 cut(s)	66, 98
AleI	CACNNNNGTG	1 cut(s)	345
AluBI	AGCT	9 cut(s)	149, 154, 158, 492, 544, 748, 824, 1136, 1157
AluI	AGCT	9 cut(s)	149, 154, 158, 492, 544, 748, 824, 1136, 1157
Alw21I	GWGCWC	1 cut(s)	546
Alw26I	GTCTC	2 cut(s)	432, 435
AlwI	GGATC	4 cut(s)	1003, 1016, 1109, 1133
Ama87I	CYCGRG	1 cut(s)	716
AoxI	GGCC	5 cut(s)	421, 656, 866, 950, 1051
ApaI	GGGCCC	1 cut(s)	425
ApeKI	GCWGC	4 cut(s)	146, 158, 821, 1133
ApoI	RAATTY	1 cut(s)	4
ArsI	GACNNNNNNTTYG	2 cut(s)	1019, 1051
AsiGI	ACCGGT	1 cut(s)	929
Asp718I	GGTACC	1 cut(s)	502
AspA2I	CCTAGG	1 cut(s)	829
AspS9I	GGNCC	9 cut(s)	421, 422, 532, 866, 1045, 1051, 1089, 1190, 1210
AsuC2I	CCSGG	1 cut(s)	1049
AsuNHI	GCTAGC	1 cut(s)	154
AvaI	CYCGRG	1 cut(s)	716
AvaII	GGWCC	5 cut(s)	532, 1045, 1089, 1190, 1210
AvrII	CCTAGG	1 cut(s)	829
BaeGI	GKGCMC	1 cut(s)	425
BalI	TGGCCA	1 cut(s)	952
BamHI	GGATCC	1 cut(s)	1008
BanI	GGYRCC	1 cut(s)	502
BanII	GRGCYC	2 cut(s)	425, 546
BbsI	GAAGAC	1 cut(s)	575
Bbv12I	GWGCWC	1 cut(s)	546
BbvI	GCAGC	4 cut(s)	145, 158, 833, 1145
BccI	CCATC	7 cut(s)	114, 455, 585, 701, 744, 750, 1021
BciT130I	CCWGG	5 cut(s)	228, 728, 873, 1005, 1093
BciVI	GTATCC	4 cut(s)	212, 303, 804, 1136
BclI	TGATCA	1 cut(s)	514
BcnI	CCSGG	1 cut(s)	1049
BcoDI	GTCTC	2 cut(s)	432, 435
BfaI	CTAG	4 cut(s)	155, 623, 830, 1130
BfmI	CTRYAG	1 cut(s)	144
BfuAI	ACCTGC	1 cut(s)	231
BfuI	GTATCC	4 cut(s)	212, 303, 804, 1136
BglI	GCCNNNNNGGC	1 cut(s)	232
BglII	AGATCT	2 cut(s)	1065, 1144
BisI	GCNGC	4 cut(s)	147, 159, 822, 1134
BlnI	CCTAGG	1 cut(s)	829
BlpI	GCTNAGC	1 cut(s)	150
BlsI	GCNGC	4 cut(s)	148, 160, 823, 1135
Bme1390I	CCNGG	6 cut(s)	228, 728, 873, 1005, 1049, 1093
Bme18I	GGWCC	5 cut(s)	532, 1045, 1089, 1190, 1210
BmeT110I	CYCGRG	1 cut(s)	716
BmgT120I	GGNCC	9 cut(s)	421, 422, 532, 866, 1045, 1051, 1089, 1190, 1210
BmiI	GGNNCC	9 cut(s)	422, 423, 504, 533, 934, 1010, 1046, 1052, 1211
BmrFI	CCNGG	6 cut(s)	228, 728, 873, 1005, 1049, 1093
BmrI	ACTGGG	3 cut(s)	848, 1051, 1107
BmtI	GCTAGC	1 cut(s)	158
BmuI	ACTGGG	3 cut(s)	848, 1051, 1107
BpiI	GAAGAC	1 cut(s)	575
Bpu10I	CCTNAGC	1 cut(s)	696
Bpu1102I	GCTNAGC	1 cut(s)	150
BpuMI	CCSGG	1 cut(s)	1049
BsaBI	GATNNNNATC	1 cut(s)	1143
BsaJI	CCNNGG	3 cut(s)	829, 1004, 1048
BsaWI	WCCGGW	1 cut(s)	929
BsaXI	ACNNNNNCTCC	2 cut(s)	765, 795
Bsc4I	CCNNNNNNNGG	5 cut(s)	418, 579, 697, 1060, 1098
Bse118I	RCCGGY	1 cut(s)	929
Bse1I	ACTGG	5 cut(s)	288, 487, 843, 1046, 1102
Bse3DI	GCAATG	1 cut(s)	748
Bse8I	GATNNNNATC	1 cut(s)	1143
BseBI	CCWGG	5 cut(s)	228, 728, 873, 1005, 1093
BseDI	CCNNGG	3 cut(s)	829, 1004, 1048
BseGI	GGATG	5 cut(s)	125, 561, 596, 761, 1000
BseJI	GATNNNNATC	1 cut(s)	1143
BseLI	CCNNNNNNNGG	5 cut(s)	418, 579, 697, 1060, 1098
BseMI	GCAATG	1 cut(s)	748
BseMII	CTCAG	3 cut(s)	141, 681, 1046
BseNI	ACTGG	5 cut(s)	288, 487, 843, 1046, 1102
BseRI	GAGGAG	2 cut(s)	14, 789
BseSI	GKGCMC	1 cut(s)	425
BseXI	GCAGC	4 cut(s)	145, 158, 833, 1145
BseYI	CCCAGC	1 cut(s)	492
BsgI	GTGCAG	1 cut(s)	369
BshFI	GGCC	5 cut(s)	423, 658, 868, 952, 1053
BshNI	GGYRCC	1 cut(s)	502
BshTI	ACCGGT	1 cut(s)	929
BsiHKAI	GWGCWC	1 cut(s)	546
BsiHKCI	CYCGRG	1 cut(s)	716
BsiSI	CCGG	2 cut(s)	930, 1048
BslFI	GGGAC	1 cut(s)	1058
BslI	CCNNNNNNNGG	5 cut(s)	418, 579, 697, 1060, 1098
BsmAI	GTCTC	2 cut(s)	432, 435
BsmBI	CGTCTC	2 cut(s)	432, 435
BsmFI	GGGAC	1 cut(s)	1058
BsmI	GAATGC	1 cut(s)	772
BsnI	GGCC	5 cut(s)	423, 658, 868, 952, 1053
BsoBI	CYCGRG	1 cut(s)	716
Bsp120I	GGGCCC	1 cut(s)	421
Bsp1286I	GDGCHC	2 cut(s)	425, 546
Bsp143I	GATC	8 cut(s)	241, 406, 514, 1008, 1065, 1101, 1138, 1144
Bsp1720I	GCTNAGC	1 cut(s)	150
BspACI	CCGC	1 cut(s)	588
BspANI	GGCC	5 cut(s)	423, 658, 868, 952, 1053
BspCNI	CTCAG	3 cut(s)	142, 680, 1047
BspHI	TCATGA	1 cut(s)	922
BspLI	GGNNCC	9 cut(s)	422, 423, 504, 533, 934, 1010, 1046, 1052, 1211
BspMAI	CTGCAG	1 cut(s)	148
BspMI	ACCTGC	1 cut(s)	231
BspOI	GCTAGC	1 cut(s)	158
BspPI	GGATC	4 cut(s)	1003, 1016, 1109, 1133
BspT107I	GGYRCC	1 cut(s)	502
BsrDI	GCAATG	1 cut(s)	748
BsrFI	RCCGGY	1 cut(s)	929
BsrI	ACTGG	5 cut(s)	288, 487, 843, 1046, 1102
BssAI	RCCGGY	1 cut(s)	929
BssECI	CCNNGG	3 cut(s)	829, 1004, 1048
BssMI	GATC	8 cut(s)	241, 406, 514, 1008, 1065, 1101, 1138, 1144
BssT1I	CCWWGG	1 cut(s)	829
Bst2UI	CCWGG	5 cut(s)	228, 728, 873, 1005, 1093
Bst4CI	ACNGT	1 cut(s)	1115
BstC8I	GCNNGC	2 cut(s)	156, 750
BstDEI	CTNAG	4 cut(s)	150, 667, 696, 1055
BstENI	CCTNNNNNAGG	1 cut(s)	695
BstF5I	GGATG	5 cut(s)	125, 561, 596, 761, 1000
BstKTI	GATC	8 cut(s)	244, 409, 517, 1011, 1068, 1104, 1141, 1147
BstMAI	GTCTC	2 cut(s)	432, 435
BstMBI	GATC	8 cut(s)	241, 406, 514, 1008, 1065, 1101, 1138, 1144
BstMWI	GCNNNNNNNGC	2 cut(s)	155, 232
BstNI	CCWGG	5 cut(s)	228, 728, 873, 1005, 1093
BstNSI	RCATGY	1 cut(s)	179
BstSCI	CCNGG	6 cut(s)	226, 726, 871, 1003, 1047, 1091
BstSFI	CTRYAG	1 cut(s)	144
BstSLI	GKGCMC	1 cut(s)	425
BstV1I	GCAGC	4 cut(s)	145, 158, 833, 1145
BstV2I	GAAGAC	1 cut(s)	575
BstX2I	RGATCY	3 cut(s)	1008, 1065, 1144
BstXI	CCANNNNNNTGG	1 cut(s)	305
BstYI	RGATCY	3 cut(s)	1008, 1065, 1144
BsuI	GTATCC	4 cut(s)	212, 303, 804, 1136
BsuRI	GGCC	5 cut(s)	423, 658, 868, 952, 1053
BtgZI	GCGATG	1 cut(s)	722
BtsCI	GGATG	5 cut(s)	125, 561, 596, 761, 1000
BtsI	GCAGTG	2 cut(s)	63, 1077
BtsIMutI	CAGTG	4 cut(s)	63, 281, 1077, 1120
BveI	ACCTGC	1 cut(s)	231
Cac8I	GCNNGC	2 cut(s)	156, 750
CciI	TCATGA	1 cut(s)	922
Cfr10I	RCCGGY	1 cut(s)	929
Cfr13I	GGNCC	9 cut(s)	421, 422, 532, 866, 1045, 1051, 1089, 1190, 1210
Csp6I	GTAC	3 cut(s)	124, 503, 721
CspAI	ACCGGT	1 cut(s)	929
CspCI	CAANNNNNGTGG	2 cut(s)	929, 964
CviAII	CATG	4 cut(s)	176, 200, 299, 923
CviQI	GTAC	3 cut(s)	124, 503, 721
DdeI	CTNAG	4 cut(s)	150, 667, 696, 1055
DpnI	GATC	8 cut(s)	243, 408, 516, 1010, 1067, 1103, 1140, 1146
DpnII	GATC	8 cut(s)	241, 406, 514, 1008, 1065, 1101, 1138, 1144
DraI	TTTAAA	1 cut(s)	336
DraIII	CACNNNGTG	1 cut(s)	944
EaeI	YGGCCR	1 cut(s)	950
Ecl136II	GAGCTC	1 cut(s)	544
Eco130I	CCWWGG	1 cut(s)	829
Eco147I	AGGCCT	1 cut(s)	658
Eco24I	GRGCYC	2 cut(s)	425, 546
Eco47I	GGWCC	5 cut(s)	532, 1045, 1089, 1190, 1210
Eco53kI	GAGCTC	1 cut(s)	544
Eco57I	CTGAAG	1 cut(s)	147
Eco88I	CYCGRG	1 cut(s)	716
EcoICRI	GAGCTC	1 cut(s)	544
EcoNI	CCTNNNNNAGG	1 cut(s)	695
EcoO109I	RGGNCCY	4 cut(s)	421, 866, 1051, 1210
EcoRI	GAATTC	1 cut(s)	4
EcoRII	CCWGG	5 cut(s)	226, 726, 871, 1003, 1091
EcoT14I	CCWWGG	1 cut(s)	829
EcoT38I	GRGCYC	2 cut(s)	425, 546
ErhI	CCWWGG	1 cut(s)	829
Esp3I	CGTCTC	2 cut(s)	432, 435
FaeI	CATG	4 cut(s)	179, 203, 302, 926
FalI	AAGNNNNNCTT	2 cut(s)	798, 830
FaqI	GGGAC	1 cut(s)	1058
FatI	CATG	4 cut(s)	175, 199, 298, 922
FbaI	TGATCA	1 cut(s)	514
Fnu4HI	GCNGC	4 cut(s)	147, 159, 822, 1134
FokI	GGATG	5 cut(s)	132, 568, 603, 768, 987
FriOI	GRGCYC	2 cut(s)	425, 546
Fsp4HI	GCNGC	4 cut(s)	147, 159, 822, 1134
FspBI	CTAG	4 cut(s)	155, 623, 830, 1130
GluI	GCNGC	4 cut(s)	147, 159, 822, 1134
GsaI	CCCAGC	1 cut(s)	496
HaeIII	GGCC	5 cut(s)	423, 658, 868, 952, 1053
HapII	CCGG	2 cut(s)	930, 1048
Hin1II	CATG	4 cut(s)	179, 203, 302, 926
HinfI	GANTC	3 cut(s)	101, 685, 854
HpaII	CCGG	2 cut(s)	930, 1048
Hpy188I	TCNGA	3 cut(s)	211, 460, 550
Hpy188III	TCNNGA	6 cut(s)	133, 165, 535, 923, 1069, 1142
HpyAV	CCTTC	7 cut(s)	106, 204, 209, 271, 383, 844, 853
HpyCH4III	ACNGT	1 cut(s)	1115
HpyCH4V	TGCA	6 cut(s)	146, 350, 381, 438, 770, 788
HpyF10VI	GCNNNNNNNGC	2 cut(s)	155, 232
HpyF3I	CTNAG	4 cut(s)	150, 667, 696, 1055
Hsp92II	CATG	4 cut(s)	179, 203, 302, 926
KpnI	GGTACC	1 cut(s)	506
Ksp22I	TGATCA	1 cut(s)	514
Kzo9I	GATC	8 cut(s)	241, 406, 514, 1008, 1065, 1101, 1138, 1144
Lsp1109I	GCAGC	4 cut(s)	145, 158, 833, 1145
MaeI	CTAG	4 cut(s)	155, 623, 830, 1130
MaeIII	GTNAC	2 cut(s)	781, 904
MalI	GATC	8 cut(s)	243, 408, 516, 1010, 1067, 1103, 1140, 1146
MboI	GATC	8 cut(s)	241, 406, 514, 1008, 1065, 1101, 1138, 1144
MboII	GAAGA	3 cut(s)	367, 580, 1195
MfeI	CAATTG	1 cut(s)	94
MflI	RGATCY	3 cut(s)	1008, 1065, 1144
MhlI	GDGCHC	2 cut(s)	425, 546
MlsI	TGGCCA	1 cut(s)	952
MluCI	AATT	7 cut(s)	4, 94, 168, 272, 559, 576, 661
MluNI	TGGCCA	1 cut(s)	952
MlyI	GAGTC	1 cut(s)	848
MmeI	TCCRAC	1 cut(s)	983
Mox20I	TGGCCA	1 cut(s)	952
MscI	TGGCCA	1 cut(s)	952
MseI	TTAA	2 cut(s)	335, 816
MslI	CAYNNNNRTG	3 cut(s)	303, 345, 741
Msp20I	TGGCCA	1 cut(s)	952
MspA1I	CMGCKG	4 cut(s)	149, 588, 824, 1136
MspI	CCGG	2 cut(s)	930, 1048
MspR9I	CCNGG	6 cut(s)	228, 728, 873, 1005, 1049, 1093
MunI	CAATTG	1 cut(s)	94
Mva1269I	GAATGC	1 cut(s)	772
MvaI	CCWGG	5 cut(s)	228, 728, 873, 1005, 1093
MwoI	GCNNNNNNNGC	2 cut(s)	155, 232
NciI	CCSGG	1 cut(s)	1049
NdeII	GATC	8 cut(s)	241, 406, 514, 1008, 1065, 1101, 1138, 1144
NheI	GCTAGC	1 cut(s)	154
NlaIII	CATG	4 cut(s)	179, 203, 302, 926
NlaIV	GGNNCC	9 cut(s)	422, 423, 504, 533, 934, 1010, 1046, 1052, 1211
NmuCI	GTSAC	1 cut(s)	904
NspI	RCATGY	1 cut(s)	179
OliI	CACNNNNGTG	1 cut(s)	345
PagI	TCATGA	1 cut(s)	922
PceI	AGGCCT	1 cut(s)	658
PciI	ACATGT	1 cut(s)	175
PctI	GAATGC	1 cut(s)	772
PfeI	GAWTC	2 cut(s)	101, 685
PfoI	TCCNGGA	2 cut(s)	871, 1091
PinAI	ACCGGT	1 cut(s)	929
PkrI	GCNGC	4 cut(s)	148, 160, 823, 1135
PleI	GAGTC	1 cut(s)	848
PpsI	GAGTC	1 cut(s)	848
PpuMI	RGGWCCY	1 cut(s)	1210
PscI	ACATGT	1 cut(s)	175
Psp124BI	GAGCTC	1 cut(s)	546
Psp5II	RGGWCCY	1 cut(s)	1210
Psp6I	CCWGG	5 cut(s)	226, 726, 871, 1003, 1091
PspFI	CCCAGC	1 cut(s)	492
PspGI	CCWGG	5 cut(s)	226, 726, 871, 1003, 1091
PspN4I	GGNNCC	9 cut(s)	422, 423, 504, 533, 934, 1010, 1046, 1052, 1211
PspOMI	GGGCCC	1 cut(s)	421
PspPI	GGNCC	9 cut(s)	421, 422, 532, 866, 1045, 1051, 1089, 1190, 1210
PspPPI	RGGWCCY	1 cut(s)	1210
PstI	CTGCAG	1 cut(s)	148
PsuI	RGATCY	3 cut(s)	1008, 1065, 1144
PvuII	CAGCTG	3 cut(s)	149, 824, 1136
RsaI	GTAC	3 cut(s)	125, 504, 722
RsaNI	GTAC	3 cut(s)	124, 503, 721
RseI	CAYNNNNRTG	3 cut(s)	303, 345, 741
SacI	GAGCTC	1 cut(s)	546
SaqAI	TTAA	2 cut(s)	335, 816
SatI	GCNGC	4 cut(s)	147, 159, 822, 1134
Sau3AI	GATC	8 cut(s)	241, 406, 514, 1008, 1065, 1101, 1138, 1144
Sau96I	GGNCC	9 cut(s)	421, 422, 532, 866, 1045, 1051, 1089, 1190, 1210
SchI	GAGTC	1 cut(s)	848
ScrFI	CCNGG	6 cut(s)	228, 728, 873, 1005, 1049, 1093
SduI	GDGCHC	2 cut(s)	425, 546
SfcI	CTRYAG	1 cut(s)	144
SinI	GGWCC	5 cut(s)	532, 1045, 1089, 1190, 1210
SmiMI	CAYNNNNRTG	3 cut(s)	303, 345, 741
Sse9I	AATT	7 cut(s)	4, 94, 168, 272, 559, 576, 661
SseBI	AGGCCT	1 cut(s)	658
SsiI	CCGC	1 cut(s)	588
SspI	AATATT	2 cut(s)	375, 1020
SspMI	CTAG	4 cut(s)	155, 623, 830, 1130
SstI	GAGCTC	1 cut(s)	546
StuI	AGGCCT	1 cut(s)	658
StyD4I	CCNGG	6 cut(s)	226, 726, 871, 1003, 1047, 1091
StyI	CCWWGG	1 cut(s)	829
TaaI	ACNGT	1 cut(s)	1115
TaqI	TCGA	2 cut(s)	857, 1070
TaqII	GACCGA	1 cut(s)	587
TasI	AATT	7 cut(s)	4, 94, 168, 272, 559, 576, 661
TatI	WGTACW	1 cut(s)	720
TfiI	GAWTC	2 cut(s)	101, 685
Tru1I	TTAA	2 cut(s)	335, 816
Tru9I	TTAA	2 cut(s)	335, 816
TscAI	CASTG	4 cut(s)	70, 288, 1084, 1120
TseFI	GTSAC	1 cut(s)	904
TseI	GCWGC	4 cut(s)	146, 158, 821, 1133
Tsp45I	GTSAC	1 cut(s)	904
TspDTI	ATGAA	8 cut(s)	17, 40, 228, 285, 572, 619, 901, 1196
TspRI	CASTG	4 cut(s)	70, 288, 1084, 1120
VpaK11BI	GGWCC	5 cut(s)	532, 1045, 1089, 1190, 1210
XagI	CCTNNNNNAGG	1 cut(s)	695
XapI	RAATTY	1 cut(s)	4
XceI	RCATGY	1 cut(s)	179
XmaJI	CCTAGG	1 cut(s)	829
XspI	CTAG	4 cut(s)	155, 623, 830, 1130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.