pycom13g04500

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
3041004 .. 3041346
343 bp
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UTR
Exon/CDS
Intron
pycom13g04500.1

Sequence Viewer

Length: 258 bp
ATGTGGATACTGAAATGTTCAGAATCGATCGAGATTGCTGCTGCTTGTGTGCGACATTCATCTGCTAAGAGACCACGAATGGGACAGGTTGTTAGAGCTTTTGATAGTTTTGTTGCTTCCGATATAAACAACGGAATGAGAGTGGGGGAAAGTGAGGCATTTGACTCGGCACAACAATCACCTGAAATTAGGTTGTTCCGGAGAATGGCATTTGGTAGTCAAAATTACAGTACAGATTTTTTCAGCGAAGAGGTATAG

Protein Analysis

86

Amino Acids

9.59

Weight (kDa)

5.75

Isoelectric Point (pI)

76.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 198
AfaI GTAC 1 cut(s) 232
AfiI CCNNNNNNNGG 2 cut(s) 80, 205
AluBI AGCT 1 cut(s) 98
AluI AGCT 1 cut(s) 98
Alw26I GTCTC 1 cut(s) 64
Aor13HI TCCGGA 1 cut(s) 198
ApeKI GCWGC 2 cut(s) 38, 41
AsuHPI GGTGA 1 cut(s) 171
BbvI GCAGC 2 cut(s) 25, 28
BcgI CGANNNNNNTGC 4 cut(s) 20, 54, 147, 181
BcoDI GTCTC 1 cut(s) 64
BisI GCNGC 2 cut(s) 39, 42
BlsI GCNGC 2 cut(s) 40, 43
Bsa29I ATCGAT 1 cut(s) 26
BsaI GGTCTC 1 cut(s) 64
BsaWI WCCGGW 1 cut(s) 198
Bsc4I CCNNNNNNNGG 2 cut(s) 80, 205
BseAI TCCGGA 1 cut(s) 198
BseCI ATCGAT 1 cut(s) 26
BseLI CCNNNNNNNGG 2 cut(s) 80, 205
BseXI GCAGC 2 cut(s) 25, 28
Bsh1285I CGRYCG 1 cut(s) 30
BshVI ATCGAT 1 cut(s) 26
BsiEI CGRYCG 1 cut(s) 30
BsiSI CCGG 1 cut(s) 199
BslFI GGGAC 1 cut(s) 96
BslI CCNNNNNNNGG 2 cut(s) 80, 205
BsmAI GTCTC 1 cut(s) 64
BsmFI GGGAC 1 cut(s) 96
Bso31I GGTCTC 1 cut(s) 64
Bsp13I TCCGGA 1 cut(s) 198
Bsp143I GATC 1 cut(s) 27
BspDI ATCGAT 1 cut(s) 26
BspEI TCCGGA 1 cut(s) 198
BspTNI GGTCTC 1 cut(s) 64
BssMI GATC 1 cut(s) 27
Bst4CI ACNGT 1 cut(s) 230
Bst6I CTCTTC 1 cut(s) 243
BstDEI CTNAG 1 cut(s) 66
BstKTI GATC 1 cut(s) 30
BstMAI GTCTC 1 cut(s) 64
BstMBI GATC 1 cut(s) 27
BstMCI CGRYCG 1 cut(s) 30
BstV1I GCAGC 2 cut(s) 25, 28
Bsu15I ATCGAT 1 cut(s) 26
BsuTUI ATCGAT 1 cut(s) 26
ClaI ATCGAT 1 cut(s) 26
Csp6I GTAC 1 cut(s) 231
CviJI RGCY 1 cut(s) 98
CviKI_1 RGCY 1 cut(s) 98
CviQI GTAC 1 cut(s) 231
DdeI CTNAG 1 cut(s) 66
DpnI GATC 1 cut(s) 29
DpnII GATC 1 cut(s) 27
Eam1104I CTCTTC 1 cut(s) 243
EarI CTCTTC 1 cut(s) 243
Eco31I GGTCTC 1 cut(s) 64
FaiI YATR 2 cut(s) 125, 256
FaqI GGGAC 1 cut(s) 96
Fnu4HI GCNGC 2 cut(s) 39, 42
Fsp4HI GCNGC 2 cut(s) 39, 42
GluI GCNGC 2 cut(s) 39, 42
HapII CCGG 1 cut(s) 199
HinfI GANTC 2 cut(s) 23, 164
HpaII CCGG 1 cut(s) 199
HphI GGTGA 1 cut(s) 171
Hpy188I TCNGA 2 cut(s) 22, 121
Hpy188III TCNNGA 2 cut(s) 31, 199
HpyCH4III ACNGT 1 cut(s) 230
HpyF3I CTNAG 1 cut(s) 66
Kpn2I TCCGGA 1 cut(s) 198
Kzo9I GATC 1 cut(s) 27
LpnPI CCDG 3 cut(s) 71, 195, 212
Lsp1109I GCAGC 2 cut(s) 25, 28
MalI GATC 1 cut(s) 29
MboI GATC 1 cut(s) 27
MluCI AATT 2 cut(s) 186, 223
MlyI GAGTC 1 cut(s) 158
MnlI CCTC 2 cut(s) 148, 244
MroI TCCGGA 1 cut(s) 198
MspI CCGG 1 cut(s) 199
NdeII GATC 1 cut(s) 27
NmeAIII GCCGAG 1 cut(s) 146
PfeI GAWTC 1 cut(s) 23
PkrI GCNGC 2 cut(s) 40, 43
Ple19I CGATCG 1 cut(s) 30
PleI GAGTC 1 cut(s) 158
PpsI GAGTC 1 cut(s) 158
PvuI CGATCG 1 cut(s) 30
RsaI GTAC 1 cut(s) 232
RsaNI GTAC 1 cut(s) 231
SatI GCNGC 2 cut(s) 39, 42
Sau3AI GATC 1 cut(s) 27
SchI GAGTC 1 cut(s) 158
SetI ASST 5 cut(s) 90, 100, 184, 194, 255
SgeI CNNG 7 cut(s) 43, 57, 87, 98, 178, 194, 211
Sse9I AATT 2 cut(s) 186, 223
TaaI ACNGT 1 cut(s) 230
TaqI TCGA 2 cut(s) 26, 30
TasI AATT 2 cut(s) 186, 223
TatI WGTACW 1 cut(s) 230
TfiI GAWTC 1 cut(s) 23
TseI GCWGC 2 cut(s) 38, 41
TspDTI ATGAA 1 cut(s) 48
TspGWI ACGGA 1 cut(s) 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.