RLG00000006518

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
7981918 .. 7985898
3981 bp
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UTR
Exon/CDS
Intron
RLM00000006518

Sequence Viewer

Length: 2130 bp
ATGGCAGCCACATCGCCATCTCCGAACTCATCTCCTTCAGCTGTGCCACCAGCTTCTAGTGCTAGTTCCACACCACCACCACAGCCCAATGTGGAATCACCAGATTCCTCAAACACTACAACTCAATCTCCACCACCTGATGTTCCATCAGCTCCTCCTCCAACTGCATCATCACCACCTCCAAATCCATCCTCCCCTTCAGTACCTACACAATCTGATCCACCAGCCTCACCGCCACCGCCTTCTTCATCCAATGTGCCTCCACCATCTTCAAATTCTCCACCCCCACCATCATCTGACCCACCAAAGAGTTCATCTTCCCCACTACCACCAACGTCTGATCCACCTGCAAGTTCACCTCCGCCACCGCAGCCAGTCAGCTCACCTCCCCCACCGCAGCCAGTGAGTTCACCTCCACCACCAACTTCAAGTCCACCTAAGACTTCACCTCCACCTCCATCATCAACGCCACCCAAAAGTTCACCTCCACCTCCATCATCAACACCGCCCAAAAGTTCACCTCCACCACCATCAGAGCCGCCTGAGAAATCTCCTCCACCTCCACCAGCAAATCCCCCTGAAACATCACCACCGCCTCCACCAACATCAAAGCCCCCTGAAACGTCACCACCGCCACCACCAACATTAAAGCCACCTGAGAAATCACCACCACCTCCAGAATCTGAGCCACCCAAAAGTTCACCTCCACCACCAGCATCAACTCCTCCTAAAAGTTCACCTCCTCCACAGGCATCAGAGCCTCCAAGCAGTTCACCCCCACCTTCAAGCCCCAACCCTCCCCCTCCACCCGGTTCTCAACCAACCCCTGTAGCCCCACCTCCGAAGTCATCAGCTCCACCACCCACAATACGACTCTCACCACCTCCACCCTCAGATGATGCTCCACCACCAACTACTCAAATTCCAAGCCCACCATCAAATATTCCAAGTTCAAACAATTCCAATCCTAATGTACCACCAAGTTCAAATGCCACAAGTAATAGTGGCCTCAGCACTGGAGGTGCAGTGGCAATTAGTGTAGTGGCTGGGATAATAGTGCTTAGCTTCATTGCATTCGCTGTATGGTGCATGAGGAGGAAGCCAAAGAAAAAGGTTTCTGGATTTGGAGGTAATGTTATGCCATCGCCGATGGTATCTTCTCCCCAATCAGATTCATCATCATTCTTGAAGGCACATTCTTCAGCTCCCCTTATAGGAAGTGGTTCTGGCAGTGATTTCGTGAATTCTCCTGCAGAACCGGCAGGAGGCAATTCTAGACCTTGGTTTACTTATGACGAACTATTTAAGGCTACAAATGGCTTTTCATCGCAGAATCTTTTGGGGGAAGGTGGATTTGGCTCTGTATATAAGGGAATCCTGCCAGATGATAGAGAGGTGGCTGTAAAACAATTGAAAATAGGTGGGAGTCAGGGTGAGAGAGAATTCAAAGCTGAAGTTGAGACCATTAGTCGCGTTCACCACCGCCATTTGGTTTCTTTGGTGGGCTATTGCATTTCTGAGAACCAAAGGCTGCTTGTCTATGAATATGTCTCTAATGATACCCTCTATTTCCATCTTCATGGAGAAGGTAGGCCAGTTCTTGACTGGGCAACACGTGTTAAAGTTGCTGCTGGTGCAGCTCGTGGAATCGCCTATCTTCATGAAGACTGCCATCCTCGCATTATTCACAGGGATATAAAGTCATCAAACATTCTATTGGATAACAACTTTGAAGCTCGGGTTTCAGATTTTGGACTTGCCAAATTGTGTCTGGATGCAAATACACATATAAGTACACGTGTCATGGGAACTTTTGGATATGTGGCCCCTGAGTATGCTTCAAGTGGCAAACTGACTGAGAAATCTGATGTGTACTCGTTTGGAGTTGTTCTTCTGGAGTTGATTACTGGACGGAAGGCTGTGGATGCATCCCAACCGTTGGGAGATGAGAGTCTAGTTGAATGGGTAAACTTAATGATCAATCTTTTATATCTTCTATTCGCTACCGATTGTTGCATGTTCCCACTATCAATATTGCTTTTACTTGTTCTTAGACAGGAAATTGATATTTCATATCTAATATTTTTGAAGTCTAAATTTAATAAATCATATCTTCATAGCCAAGGTTGA

Protein Analysis

710

Amino Acids

73.65

Weight (kDa)

6.29

Isoelectric Point (pI)

87.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 442 - 642 7e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 444 - 639 2.7e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 355
Acc36I ACCTGC 1 cut(s) 355
AccB7I CCANNNNNTGG 1 cut(s) 1939
AccII CGCG 1 cut(s) 1473
AclWI GGATC 2 cut(s) 212, 335
AcsI RAATTY 5 cut(s) 274, 921, 1243, 1442, 2096
AcuI CTGAAG 4 cut(s) 21, 183, 1185, 1473
AcvI CACGTG 2 cut(s) 1616, 1799
AfaI GTAC 4 cut(s) 204, 975, 1795, 1874
AfiI CCNNNNNNNGG 5 cut(s) 809, 1214, 1265, 1489, 1939
AflIII ACRYGT 4 cut(s) 1613, 1615, 1796, 1798
AhdI GACNNNNNGTC 1 cut(s) 1467
AjuI GAANNNNNNNTTGG 2 cut(s) 1338, 1370
Alw26I GTCTC 2 cut(s) 1454, 1555
AlwI GGATC 2 cut(s) 212, 335
AlwNI CAGNNNCTG 1 cut(s) 683
Ama87I CYCGRG 1 cut(s) 1737
AoxI GGCC 3 cut(s) 1006, 1592, 1824
ApeKI GCWGC 6 cut(s) 5, 370, 397, 1531, 1628, 1637
ApoI RAATTY 5 cut(s) 274, 921, 1243, 1442, 2096
Asp700I GAANNNNTTC 1 cut(s) 1222
AspS9I GGNCC 1 cut(s) 1825
AsuC2I CCSGG 1 cut(s) 810
AvaI CYCGRG 1 cut(s) 1737
BauI CACGAG 1 cut(s) 1641
BbrPI CACGTG 2 cut(s) 1616, 1799
BbsI GAAGAC 1 cut(s) 1671
BbvCI CCTCAGC 1 cut(s) 1010
BbvI GCAGC 6 cut(s) 17, 382, 409, 1518, 1615, 1649
BcgI CGANNNNNNTGC 3 cut(s) 28, 1219, 1253
BclI TGATCA 1 cut(s) 1977
BcnI CCSGG 1 cut(s) 810
BcoDI GTCTC 2 cut(s) 1454, 1555
BfaI CTAG 4 cut(s) 57, 63, 1275, 1955
BfmI CTRYAG 2 cut(s) 828, 1251
BfuAI ACCTGC 1 cut(s) 355
BisI GCNGC 7 cut(s) 6, 371, 398, 539, 1532, 1629, 1638
BlpI GCTNAGC 1 cut(s) 1061
BlsI GCNGC 7 cut(s) 7, 372, 399, 540, 1533, 1630, 1639
Bme1390I CCNGG 1 cut(s) 810
BmeRI GACNNNNNGTC 1 cut(s) 1467
BmeT110I CYCGRG 1 cut(s) 1737
BmgT120I GGNCC 1 cut(s) 1825
BmiI GGNNCC 1 cut(s) 1827
BmrFI CCNGG 1 cut(s) 810
BmrI ACTGGG 1 cut(s) 1615
BmsI GCATC 7 cut(s) 176, 725, 761, 889, 1765, 1915, 1937
BmuI ACTGGG 1 cut(s) 1615
BpiI GAAGAC 1 cut(s) 1671
BplI GAGNNNNNCTC 2 cut(s) 397, 429
BpmI CTGGAG 3 cut(s) 660, 1038, 1916
Bpu10I CCTNAGC 1 cut(s) 1010
Bpu1102I GCTNAGC 1 cut(s) 1061
BpuMI CCSGG 1 cut(s) 810
BsaAI YACGTR 2 cut(s) 1616, 1799
BsaI GGTCTC 1 cut(s) 1454
BsaJI CCNNGG 2 cut(s) 1280, 2122
Bsc4I CCNNNNNNNGG 5 cut(s) 809, 1214, 1265, 1489, 1939
Bse118I RCCGGY 1 cut(s) 1258
Bse1I ACTGG 6 cut(s) 374, 401, 1021, 1595, 1610, 1912
Bse3DI GCAATG 1 cut(s) 1068
BseDI CCNNGG 2 cut(s) 1280, 2122
BseGI GGATG 6 cut(s) 188, 248, 1672, 1780, 1928, 1930
BseLI CCNNNNNNNGG 5 cut(s) 809, 1214, 1265, 1489, 1939
BseMI GCAATG 1 cut(s) 1068
BseMII CTCAG 8 cut(s) 534, 648, 675, 906, 1024, 1509, 1821, 1848
BseNI ACTGG 6 cut(s) 374, 401, 1021, 1595, 1610, 1912
BseRI GAGGAG 6 cut(s) 144, 147, 543, 714, 732, 1108
BseXI GCAGC 6 cut(s) 17, 382, 409, 1518, 1615, 1649
BseYI CCCAGC 1 cut(s) 1046
BsgI GTGCAG 2 cut(s) 1044, 1656
Bsh1236I CGCG 1 cut(s) 1473
BshFI GGCC 3 cut(s) 1008, 1594, 1826
BsiHKCI CYCGRG 1 cut(s) 1737
BsiSI CCGG 2 cut(s) 810, 1259
BslI CCNNNNNNNGG 5 cut(s) 809, 1214, 1265, 1489, 1939
BsmAI GTCTC 2 cut(s) 1454, 1555
BsmI GAATGC 1 cut(s) 1073
BsnI GGCC 3 cut(s) 1008, 1594, 1826
Bso31I GGTCTC 1 cut(s) 1454
BsoBI CYCGRG 1 cut(s) 1737
Bsp143I GATC 3 cut(s) 217, 340, 1977
Bsp1720I GCTNAGC 1 cut(s) 1061
BspANI GGCC 3 cut(s) 1008, 1594, 1826
BspCNI CTCAG 8 cut(s) 535, 649, 676, 905, 1023, 1510, 1822, 1849
BspFNI CGCG 1 cut(s) 1473
BspHI TCATGA 1 cut(s) 1660
BspLI GGNNCC 1 cut(s) 1827
BspMAI CTGCAG 1 cut(s) 1255
BspMI ACCTGC 1 cut(s) 355
BspPI GGATC 2 cut(s) 212, 335
BspTNI GGTCTC 1 cut(s) 1454
BsrDI GCAATG 1 cut(s) 1068
BsrFI RCCGGY 1 cut(s) 1258
BsrI ACTGG 6 cut(s) 374, 401, 1021, 1595, 1610, 1912
BssAI RCCGGY 1 cut(s) 1258
BssECI CCNNGG 2 cut(s) 1280, 2122
BssMI GATC 3 cut(s) 217, 340, 1977
BssSI CACGAG 1 cut(s) 1641
BssT1I CCWWGG 2 cut(s) 1280, 2122
Bst2BI CACGAG 1 cut(s) 1641
Bst4CI ACNGT 1 cut(s) 1938
BstBAI YACGTR 2 cut(s) 1616, 1799
BstF5I GGATG 6 cut(s) 188, 248, 1672, 1780, 1928, 1930
BstFNI CGCG 1 cut(s) 1473
BstKTI GATC 3 cut(s) 220, 343, 1980
BstMAI GTCTC 2 cut(s) 1454, 1555
BstMBI GATC 3 cut(s) 217, 340, 1977
BstMWI GCNNNNNNNGC 7 cut(s) 59, 370, 1259, 1634, 1637, 1677, 1925
BstNSI RCATGY 1 cut(s) 2020
BstSCI CCNGG 1 cut(s) 808
BstSFI CTRYAG 2 cut(s) 828, 1251
BstUI CGCG 1 cut(s) 1473
BstV1I GCAGC 6 cut(s) 17, 382, 409, 1518, 1615, 1649
BstV2I GAAGAC 1 cut(s) 1671
BstXI CCANNNNNNTGG 1 cut(s) 1580
BsuRI GGCC 3 cut(s) 1008, 1594, 1826
BtgZI GCGATG 2 cut(s) 1128, 1311
BtsCI GGATG 6 cut(s) 188, 248, 1672, 1780, 1928, 1930
BtsI GCAGTG 2 cut(s) 1032, 1237
BtsIMutI CAGTG 4 cut(s) 408, 1014, 1032, 1237
BveI ACCTGC 1 cut(s) 355
CaiI CAGNNNCTG 1 cut(s) 683
CciI TCATGA 1 cut(s) 1660
Cfr10I RCCGGY 1 cut(s) 1258
Cfr13I GGNCC 1 cut(s) 1825
Csp6I GTAC 4 cut(s) 203, 974, 1794, 1873
CviAII CATG 5 cut(s) 1090, 1580, 1661, 1804, 2017
CviQI GTAC 4 cut(s) 203, 974, 1794, 1873
DpnI GATC 3 cut(s) 219, 342, 1979
DpnII GATC 3 cut(s) 217, 340, 1977
DriI GACNNNNNGTC 1 cut(s) 1467
Eam1105I GACNNNNNGTC 1 cut(s) 1467
EciI GGCGGA 1 cut(s) 351
Eco130I CCWWGG 2 cut(s) 1280, 2122
Eco31I GGTCTC 1 cut(s) 1454
Eco57I CTGAAG 4 cut(s) 21, 183, 1185, 1473
Eco72I CACGTG 2 cut(s) 1616, 1799
Eco88I CYCGRG 1 cut(s) 1737
EcoRI GAATTC 2 cut(s) 1243, 1442
EcoT14I CCWWGG 2 cut(s) 1280, 2122
EcoT22I ATGCAT 1 cut(s) 1930
ErhI CCWWGG 2 cut(s) 1280, 2122
FaeI CATG 5 cut(s) 1093, 1583, 1664, 1807, 2020
FatI CATG 5 cut(s) 1089, 1579, 1660, 1803, 2016
FbaI TGATCA 1 cut(s) 1977
Fnu4HI GCNGC 7 cut(s) 6, 371, 398, 539, 1532, 1629, 1638
FokI GGATG 6 cut(s) 175, 235, 1659, 1787, 1915, 1937
Fsp4HI GCNGC 7 cut(s) 6, 371, 398, 539, 1532, 1629, 1638
FspBI CTAG 4 cut(s) 57, 63, 1275, 1955
GluI GCNGC 7 cut(s) 6, 371, 398, 539, 1532, 1629, 1638
GsaI CCCAGC 1 cut(s) 1050
GsuI CTGGAG 3 cut(s) 660, 1038, 1916
HaeIII GGCC 3 cut(s) 1008, 1594, 1826
HapII CCGG 2 cut(s) 810, 1259
Hin1II CATG 5 cut(s) 1093, 1583, 1664, 1807, 2020
HpaII CCGG 2 cut(s) 810, 1259
Hpy188III TCNNGA 9 cut(s) 677, 1119, 1186, 1240, 1275, 1601, 1661, 1772, 1895
HpyAV CCTTC 8 cut(s) 45, 207, 252, 792, 1183, 1340, 1580, 1909
HpyCH4III ACNGT 1 cut(s) 1938
HpyCH4IV ACGT 4 cut(s) 335, 623, 1615, 1798
HpyF10VI GCNNNNNNNGC 7 cut(s) 59, 370, 1259, 1634, 1637, 1677, 1925
HpySE526I ACGT 4 cut(s) 335, 623, 1615, 1798
Hsp92II CATG 5 cut(s) 1093, 1583, 1664, 1807, 2020
Ksp22I TGATCA 1 cut(s) 1977
Kzo9I GATC 3 cut(s) 217, 340, 1977
LmnI GCTCC 4 cut(s) 157, 859, 907, 1210
Lsp1109I GCAGC 6 cut(s) 17, 382, 409, 1518, 1615, 1649
LweI GCATC 7 cut(s) 176, 725, 761, 889, 1765, 1915, 1937
MaeI CTAG 4 cut(s) 57, 63, 1275, 1955
MaeII ACGT 4 cut(s) 335, 623, 1615, 1798
MaeIII GTNAC 1 cut(s) 624
MalI GATC 3 cut(s) 219, 342, 1979
MboI GATC 3 cut(s) 217, 340, 1977
MfeI CAATTG 1 cut(s) 1409
MlyI GAGTC 3 cut(s) 867, 1435, 1960
MmeI TCCRAC 1 cut(s) 185
Mph1103I ATGCAT 1 cut(s) 1930
MroXI GAANNNNTTC 1 cut(s) 1222
MseI TTAA 5 cut(s) 647, 1305, 1620, 1973, 2100
MslI CAYNNNNRTG 1 cut(s) 1578
MspA1I CMGCKG 1 cut(s) 41
MspI CCGG 2 cut(s) 810, 1259
MspR9I CCNGG 1 cut(s) 810
MunI CAATTG 1 cut(s) 1409
Mva1269I GAATGC 1 cut(s) 1073
MvnI CGCG 1 cut(s) 1473
MwoI GCNNNNNNNGC 7 cut(s) 59, 370, 1259, 1634, 1637, 1677, 1925
NciI CCSGG 1 cut(s) 810
NdeII GATC 3 cut(s) 217, 340, 1977
NlaIII CATG 5 cut(s) 1093, 1583, 1664, 1807, 2020
NlaIV GGNNCC 1 cut(s) 1827
NmuCI GTSAC 1 cut(s) 624
NsiI ATGCAT 1 cut(s) 1930
NspI RCATGY 1 cut(s) 2020
PagI TCATGA 1 cut(s) 1660
PaqCI CACCTGC 1 cut(s) 355
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 1 cut(s) 1073
PdmI GAANNNNTTC 1 cut(s) 1222
PfeI GAWTC 7 cut(s) 95, 104, 680, 1172, 1333, 1374, 1647
PflMI CCANNNNNTGG 1 cut(s) 1939
PkrI GCNGC 7 cut(s) 7, 372, 399, 540, 1533, 1630, 1639
PleI GAGTC 3 cut(s) 867, 1434, 1959
PmaCI CACGTG 2 cut(s) 1616, 1799
PmlI CACGTG 2 cut(s) 1616, 1799
PpsI GAGTC 3 cut(s) 867, 1434, 1959
Ppu21I YACGTR 2 cut(s) 1616, 1799
PspCI CACGTG 2 cut(s) 1616, 1799
PspFI CCCAGC 1 cut(s) 1046
PspN4I GGNNCC 1 cut(s) 1827
PspPI GGNCC 1 cut(s) 1825
PstI CTGCAG 1 cut(s) 1255
PstNI CAGNNNCTG 1 cut(s) 683
PvuII CAGCTG 1 cut(s) 41
RsaI GTAC 4 cut(s) 204, 975, 1795, 1874
RsaNI GTAC 4 cut(s) 203, 974, 1794, 1873
RseI CAYNNNNRTG 1 cut(s) 1578
SaqAI TTAA 5 cut(s) 647, 1305, 1620, 1973, 2100
SatI GCNGC 7 cut(s) 6, 371, 398, 539, 1532, 1629, 1638
Sau3AI GATC 3 cut(s) 217, 340, 1977
Sau96I GGNCC 1 cut(s) 1825
SchI GAGTC 3 cut(s) 867, 1435, 1960
ScrFI CCNGG 1 cut(s) 810
SfaNI GCATC 7 cut(s) 176, 725, 761, 889, 1765, 1915, 1937
SfcI CTRYAG 2 cut(s) 828, 1251
SmiMI CAYNNNNRTG 1 cut(s) 1578
SspI AATATT 3 cut(s) 943, 2034, 2082
SspMI CTAG 4 cut(s) 57, 63, 1275, 1955
StyD4I CCNGG 1 cut(s) 808
StyI CCWWGG 2 cut(s) 1280, 2122
TaaI ACNGT 1 cut(s) 1938
TaiI ACGT 4 cut(s) 338, 626, 1618, 1801
TatI WGTACW 2 cut(s) 1793, 1872
TauI GCSGC 1 cut(s) 541
TfiI GAWTC 7 cut(s) 95, 104, 680, 1172, 1333, 1374, 1647
Tru1I TTAA 5 cut(s) 647, 1305, 1620, 1973, 2100
Tru9I TTAA 5 cut(s) 647, 1305, 1620, 1973, 2100
TscAI CASTG 4 cut(s) 408, 1021, 1032, 1237
TseFI GTSAC 1 cut(s) 624
TseI GCWGC 6 cut(s) 5, 370, 397, 1531, 1628, 1637
Tsp45I GTSAC 1 cut(s) 624
TspGWI ACGGA 1 cut(s) 1927
TspRI CASTG 4 cut(s) 408, 1021, 1032, 1237
Van91I CCANNNNNTGG 1 cut(s) 1939
XapI RAATTY 5 cut(s) 274, 921, 1243, 1442, 2096
XbaI TCTAGA 1 cut(s) 1274
XceI RCATGY 1 cut(s) 2020
XcmI CCANNNNNNNNNTGG 2 cut(s) 1602, 1768
XmnI GAANNNNTTC 1 cut(s) 1222
XspI CTAG 4 cut(s) 57, 63, 1275, 1955
Zsp2I ATGCAT 1 cut(s) 1930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.