Rmu_sc0000579.1_g000005

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000579.1
Physical Location & Seq
Reverse (-)
29253 .. 32950
3698 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000579.1_g000005.1.cds

Sequence Viewer

Length: 2277 bp
atggcaaccacatcgccgtctccgaactcatctccttcagctgtgccaccagcttctagtgctagttccacaccaccaccacagcccaatgtggaatcaccagattcctcagacactttaccggctgatgttccatcagctcctcctccaactgcatcatcaccccctccaattccatcctccccttccgtacctacaccatcacctccagtgaatcaacaatctgatccaccagcctcaccgccactgtcttcttcatccaatgtgcctccaccatcttcaaattcttcacccccaccatcatctgacccaccaaagagttcaccttccccaccaccaccaacgtctgatccacctgcaagttcacctcccccaccacagccagtgagttcacctccaccaccaacttcaagtccacctaagacttcacctccacctccatcatcaacgccgcccaaaagttcacctccacctccatcatcaacaccgcccaaaagttcaccatcagagccacctgagaaatctcctccacctccaccagcaaatccccctgaaacatcaccaccgcctccaccaacatcaaagccccctgaaacgtcaccaccgccgccaccaacatcaaagccacctgagaaatcaccaccacctccagaatctgagccacccaaaagttcacctccaccagcatcaactcctcctaaaagttcacctcctccagagcctccaagcagttcacccccaccttcaagccccaaccctccccctccacccggttctcaaccaacccctgcagccccacctccgaagtcatcagctccaccacccacaatacgactctcaccacctccaccctcagatgatgctccaccaccaactactcaaattccaagcccaccatcaaatattccaagttcaaacaattccaatgctaatgtaccaccaagttcaaatgccacaagtaataggggccttagcactggaggtgcagtggcaattagtgtagtggctgggataatagtgcttagcttcattgcattcgctgtatggtgcatgaggaggaagcaaaagaaaaaggtttctggatttggaggttatgttatgccatcgccgatggtatcttctccccaatcagattcatcatcattcttgaaggcacattcttcagctccccttataggaagtggttctggtagtgatttcgtgaattctcctgcagaaccggcagcaggcaattcaagaccttggtttacttatgacgaactagctaaggctacaaatggcttttcatctcagaatcttttgggggaaggtggatttggctctgtatataagggaatcctgccagatgatagagaggtggcagtaaaacaattgaaaataggtgggagtcagggtgagagagaattcaaagctgaagttgagaccattagtcgtgttcaccaccgccatttggtttctttggtgggctattgcatttctgagaaccaaaggctgcttgtctatgaatatgtctctaatgataccctctatttccatcttcatggagaaggtaggtcagttcttgactgggcaacacgtgttaaagttgctgctggtgcagctcgtggaatcgcctatcttcatgaagactgccatcctcgcattattcacagggatataaagtcatcaaacattctattagataacaactttgaagctcgggtttcagattttggacttgccaaattgtgtctggatgcaaatacacatataagtacacgtgtcatgggaacttttggatatgtggcccctgagtatgcttcaagtggcaaactgactgagaaatctgatgtgtactcgtttggagttgttcttctggagttgattactggacggaaggctgtggatgcatcccaaccgttgggagatgagagtctagttgaatgggctcgacccttattgggttatgctcttgataatgaggagtttgaaggtttggttgatcgaaggcttgagaagaactatgttgagagtgaagtgttcagactgattgagattgctgctgcttgtgtgcgacactcatctgctaagagaccacgaatgggacaggttgttagagctttcgatagtatggccaccgccgatttaaccaatggaatgagagtaggggaaagtgagacattcaactcggctcaacaatcagctgaaattagattgtttcggagaatggcatttggtagtcaaaattacagtacagatttttttagcgaaggtagcgggaatggtaacccggtatag

Protein Analysis

758

Amino Acids

79.03

Weight (kDa)

5.96

Isoelectric Point (pI)

84.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 364
Acc36I ACCTGC 1 cut(s) 364
AccB7I CCANNNNNTGG 1 cut(s) 1900
AciI CCGC 9 cut(s) 242, 452, 488, 566, 605, 608, 1444, 2118, 2256
AclWI GGATC 2 cut(s) 221, 344
AcoI YGGCCR 1 cut(s) 2112
AcsI RAATTY 4 cut(s) 283, 882, 1204, 1403
AcuI CTGAAG 3 cut(s) 21, 1146, 1434
AcvI CACGTG 2 cut(s) 1577, 1760
AfaI GTAC 5 cut(s) 192, 936, 1756, 1835, 2233
AfiI CCNNNNNNNGG 7 cut(s) 770, 1175, 1226, 1450, 1900, 1940, 2081
AflIII ACRYGT 4 cut(s) 1574, 1576, 1757, 1759
AhdI GACNNNNNGTC 1 cut(s) 1428
AjuI GAANNNNNNNTTGG 2 cut(s) 1299, 1331
Alw26I GTCTC 5 cut(s) 24, 1415, 1516, 2065, 2150
AlwI GGATC 2 cut(s) 221, 344
AlwNI CAGNNNCTG 1 cut(s) 656
Ama87I CYCGRG 1 cut(s) 1698
AoxI GGCC 3 cut(s) 967, 1785, 2112
ApeKI GCWGC 7 cut(s) 791, 1223, 1492, 1589, 1598, 2039, 2042
ApoI RAATTY 4 cut(s) 283, 882, 1204, 1403
Asp700I GAANNNNTTC 1 cut(s) 1183
AspS9I GGNCC 2 cut(s) 967, 1786
AsuC2I CCSGG 2 cut(s) 771, 2270
AvaI CYCGRG 1 cut(s) 1698
BalI TGGCCA 1 cut(s) 2114
BanII GRGCYC 1 cut(s) 1930
BauI CACGAG 1 cut(s) 1602
BbrPI CACGTG 2 cut(s) 1577, 1760
BbsI GAAGAC 2 cut(s) 243, 1632
BbvI GCAGC 7 cut(s) 803, 1235, 1479, 1576, 1610, 2026, 2029
BcgI CGANNNNNNTGC 1 cut(s) 28
BcnI CCSGG 2 cut(s) 771, 2270
BcoDI GTCTC 5 cut(s) 24, 1415, 1516, 2065, 2150
BfaI CTAG 4 cut(s) 57, 63, 1262, 1916
BfmI CTRYAG 2 cut(s) 789, 1212
BfuAI ACCTGC 1 cut(s) 364
BisI GCNGC 9 cut(s) 452, 608, 792, 1224, 1493, 1590, 1599, 2040, 2043
BlpI GCTNAGC 1 cut(s) 1022
BlsI GCNGC 9 cut(s) 453, 609, 793, 1225, 1494, 1591, 1600, 2041, 2044
Bme1390I CCNGG 2 cut(s) 771, 2270
BmeRI GACNNNNNGTC 1 cut(s) 1428
BmeT110I CYCGRG 1 cut(s) 1698
BmgT120I GGNCC 2 cut(s) 967, 1786
BmiI GGNNCC 2 cut(s) 968, 1788
BmrFI CCNGG 2 cut(s) 771, 2270
BmrI ACTGGG 1 cut(s) 1576
BmsI GCATC 6 cut(s) 164, 695, 850, 1726, 1876, 1898
BmuI ACTGGG 1 cut(s) 1576
BpiI GAAGAC 2 cut(s) 243, 1632
BplI GAGNNNNNCTC 2 cut(s) 379, 411
BpmI CTGGAG 5 cut(s) 192, 633, 699, 999, 1877
Bpu10I CCTNAGC 2 cut(s) 971, 1266
Bpu1102I GCTNAGC 1 cut(s) 1022
BpuEI CTTGAG 1 cut(s) 2012
BpuMI CCSGG 2 cut(s) 771, 2270
BsaAI YACGTR 2 cut(s) 1577, 1760
BsaI GGTCTC 2 cut(s) 1415, 2065
BsaJI CCNNGG 1 cut(s) 1241
BsaXI ACNNNNNCTCC 8 cut(s) 415, 445, 972, 1002, 1080, 1110, 1378, 1408
Bsc4I CCNNNNNNNGG 7 cut(s) 770, 1175, 1226, 1450, 1900, 1940, 2081
Bse118I RCCGGY 2 cut(s) 121, 1219
Bse1I ACTGG 5 cut(s) 209, 383, 982, 1571, 1873
Bse3DI GCAATG 1 cut(s) 1029
BseDI CCNNGG 1 cut(s) 1241
BseGI GGATG 6 cut(s) 176, 257, 1633, 1741, 1889, 1891
BseLI CCNNNNNNNGG 7 cut(s) 770, 1175, 1226, 1450, 1900, 1940, 2081
BseMI GCAATG 1 cut(s) 1029
BseMII CTCAG 9 cut(s) 123, 507, 621, 648, 867, 1304, 1470, 1782, 1809
BseNI ACTGG 5 cut(s) 209, 383, 982, 1571, 1873
BseRI GAGGAG 7 cut(s) 132, 135, 516, 684, 702, 1069, 1976
BseXI GCAGC 7 cut(s) 803, 1235, 1479, 1576, 1610, 2026, 2029
BseYI CCCAGC 1 cut(s) 1007
BsgI GTGCAG 2 cut(s) 1005, 1617
BshFI GGCC 3 cut(s) 969, 1787, 2114
BsiHKCI CYCGRG 1 cut(s) 1698
BsiSI CCGG 4 cut(s) 122, 771, 1220, 2270
BslFI GGGAC 1 cut(s) 2097
BslI CCNNNNNNNGG 7 cut(s) 770, 1175, 1226, 1450, 1900, 1940, 2081
BsmAI GTCTC 5 cut(s) 24, 1415, 1516, 2065, 2150
BsmBI CGTCTC 1 cut(s) 24
BsmFI GGGAC 1 cut(s) 2097
BsmI GAATGC 1 cut(s) 1034
BsnI GGCC 3 cut(s) 969, 1787, 2114
Bso31I GGTCTC 2 cut(s) 1415, 2065
BsoBI CYCGRG 1 cut(s) 1698
Bsp1286I GDGCHC 1 cut(s) 1930
Bsp143I GATC 3 cut(s) 226, 349, 1981
Bsp1720I GCTNAGC 1 cut(s) 1022
BspACI CCGC 9 cut(s) 242, 452, 488, 566, 605, 608, 1444, 2118, 2256
BspANI GGCC 3 cut(s) 969, 1787, 2114
BspCNI CTCAG 9 cut(s) 122, 508, 622, 649, 866, 1303, 1471, 1783, 1810
BspHI TCATGA 1 cut(s) 1621
BspLI GGNNCC 2 cut(s) 968, 1788
BspMAI CTGCAG 2 cut(s) 793, 1216
BspMI ACCTGC 1 cut(s) 364
BspPI GGATC 2 cut(s) 221, 344
BspTNI GGTCTC 2 cut(s) 1415, 2065
BsrDI GCAATG 1 cut(s) 1029
BsrFI RCCGGY 2 cut(s) 121, 1219
BsrI ACTGG 5 cut(s) 209, 383, 982, 1571, 1873
BssAI RCCGGY 2 cut(s) 121, 1219
BssECI CCNNGG 1 cut(s) 1241
BssMI GATC 3 cut(s) 226, 349, 1981
BssSI CACGAG 1 cut(s) 1602
BssT1I CCWWGG 1 cut(s) 1241
Bst2BI CACGAG 1 cut(s) 1602
Bst4CI ACNGT 3 cut(s) 249, 1899, 2231
BstBAI YACGTR 2 cut(s) 1577, 1760
BstC8I GCNNGC 1 cut(s) 1228
BstEII GGTNACC 1 cut(s) 2264
BstF5I GGATG 6 cut(s) 176, 257, 1633, 1741, 1889, 1891
BstKTI GATC 3 cut(s) 229, 352, 1984
BstMAI GTCTC 5 cut(s) 24, 1415, 1516, 2065, 2150
BstMBI GATC 3 cut(s) 226, 349, 1981
BstMWI GCNNNNNNNGC 7 cut(s) 59, 1220, 1595, 1598, 1638, 1886, 2253
BstPI GGTNACC 1 cut(s) 2264
BstSCI CCNGG 2 cut(s) 769, 2268
BstSFI CTRYAG 2 cut(s) 789, 1212
BstV1I GCAGC 7 cut(s) 803, 1235, 1479, 1576, 1610, 2026, 2029
BstV2I GAAGAC 2 cut(s) 243, 1632
BstXI CCANNNNNNTGG 1 cut(s) 1541
BsuRI GGCC 3 cut(s) 969, 1787, 2114
BtgZI GCGATG 1 cut(s) 1089
BtsCI GGATG 6 cut(s) 176, 257, 1633, 1741, 1889, 1891
BtsI GCAGTG 1 cut(s) 993
BtsIMutI CAGTG 5 cut(s) 216, 245, 390, 975, 993
BveI ACCTGC 1 cut(s) 364
Cac8I GCNNGC 1 cut(s) 1228
CaiI CAGNNNCTG 1 cut(s) 656
CciI TCATGA 1 cut(s) 1621
Cfr10I RCCGGY 2 cut(s) 121, 1219
Cfr13I GGNCC 2 cut(s) 967, 1786
Csp6I GTAC 5 cut(s) 191, 935, 1755, 1834, 2232
CviAII CATG 4 cut(s) 1051, 1541, 1622, 1765
CviQI GTAC 5 cut(s) 191, 935, 1755, 1834, 2232
DpnI GATC 3 cut(s) 228, 351, 1983
DpnII GATC 3 cut(s) 226, 349, 1981
DriI GACNNNNNGTC 1 cut(s) 1428
EaeI YGGCCR 1 cut(s) 2112
Eam1105I GACNNNNNGTC 1 cut(s) 1428
Eco130I CCWWGG 1 cut(s) 1241
Eco24I GRGCYC 1 cut(s) 1930
Eco31I GGTCTC 2 cut(s) 1415, 2065
Eco57I CTGAAG 3 cut(s) 21, 1146, 1434
Eco72I CACGTG 2 cut(s) 1577, 1760
Eco88I CYCGRG 1 cut(s) 1698
Eco91I GGTNACC 1 cut(s) 2264
EcoO109I RGGNCCY 1 cut(s) 967
EcoO65I GGTNACC 1 cut(s) 2264
EcoRI GAATTC 2 cut(s) 1204, 1403
EcoT14I CCWWGG 1 cut(s) 1241
EcoT22I ATGCAT 1 cut(s) 1891
EcoT38I GRGCYC 1 cut(s) 1930
ErhI CCWWGG 1 cut(s) 1241
Esp3I CGTCTC 1 cut(s) 24
FaeI CATG 4 cut(s) 1054, 1544, 1625, 1768
FaqI GGGAC 1 cut(s) 2097
FatI CATG 4 cut(s) 1050, 1540, 1621, 1764
FauI CCCGC 1 cut(s) 2249
Fnu4HI GCNGC 9 cut(s) 452, 608, 792, 1224, 1493, 1590, 1599, 2040, 2043
FokI GGATG 6 cut(s) 163, 244, 1620, 1748, 1876, 1898
FriOI GRGCYC 1 cut(s) 1930
Fsp4HI GCNGC 9 cut(s) 452, 608, 792, 1224, 1493, 1590, 1599, 2040, 2043
FspBI CTAG 4 cut(s) 57, 63, 1262, 1916
GluI GCNGC 9 cut(s) 452, 608, 792, 1224, 1493, 1590, 1599, 2040, 2043
GsaI CCCAGC 1 cut(s) 1011
GsuI CTGGAG 5 cut(s) 192, 633, 699, 999, 1877
HaeIII GGCC 3 cut(s) 969, 1787, 2114
HapII CCGG 4 cut(s) 122, 771, 1220, 2270
Hin1II CATG 4 cut(s) 1054, 1544, 1625, 1768
HpaII CCGG 4 cut(s) 122, 771, 1220, 2270
HpyCH4III ACNGT 3 cut(s) 249, 1899, 2231
HpyCH4IV ACGT 4 cut(s) 344, 596, 1576, 1759
HpyF10VI GCNNNNNNNGC 7 cut(s) 59, 1220, 1595, 1598, 1638, 1886, 2253
HpySE526I ACGT 4 cut(s) 344, 596, 1576, 1759
Hsp92II CATG 4 cut(s) 1054, 1544, 1625, 1768
Kzo9I GATC 3 cut(s) 226, 349, 1981
LmnI GCTCC 4 cut(s) 145, 820, 868, 1171
Lsp1109I GCAGC 7 cut(s) 803, 1235, 1479, 1576, 1610, 2026, 2029
LweI GCATC 6 cut(s) 164, 695, 850, 1726, 1876, 1898
MaeI CTAG 4 cut(s) 57, 63, 1262, 1916
MaeII ACGT 4 cut(s) 344, 596, 1576, 1759
MaeIII GTNAC 2 cut(s) 597, 2264
MalI GATC 3 cut(s) 228, 351, 1983
MboI GATC 3 cut(s) 226, 349, 1981
MfeI CAATTG 1 cut(s) 1370
MhlI GDGCHC 1 cut(s) 1930
MlsI TGGCCA 1 cut(s) 2114
MluNI TGGCCA 1 cut(s) 2114
MlyI GAGTC 3 cut(s) 828, 1396, 1921
MmeI TCCRAC 1 cut(s) 173
Mox20I TGGCCA 1 cut(s) 2114
Mph1103I ATGCAT 1 cut(s) 1891
MroXI GAANNNNTTC 1 cut(s) 1183
MscI TGGCCA 1 cut(s) 2114
MseI TTAA 2 cut(s) 1581, 2126
MslI CAYNNNNRTG 1 cut(s) 1539
Msp20I TGGCCA 1 cut(s) 2114
MspA1I CMGCKG 2 cut(s) 41, 2183
MspI CCGG 4 cut(s) 122, 771, 1220, 2270
MspR9I CCNGG 2 cut(s) 771, 2270
MunI CAATTG 1 cut(s) 1370
Mva1269I GAATGC 1 cut(s) 1034
MwoI GCNNNNNNNGC 7 cut(s) 59, 1220, 1595, 1598, 1638, 1886, 2253
NciI CCSGG 2 cut(s) 771, 2270
NdeII GATC 3 cut(s) 226, 349, 1981
NlaIII CATG 4 cut(s) 1054, 1544, 1625, 1768
NlaIV GGNNCC 2 cut(s) 968, 1788
NmeAIII GCCGAG 1 cut(s) 2147
NmuCI GTSAC 1 cut(s) 597
NsiI ATGCAT 1 cut(s) 1891
PagI TCATGA 1 cut(s) 1621
PaqCI CACCTGC 1 cut(s) 364
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 1 cut(s) 1034
PdmI GAANNNNTTC 1 cut(s) 1183
PfeI GAWTC 8 cut(s) 95, 104, 214, 653, 1133, 1294, 1335, 1608
PflMI CCANNNNNTGG 1 cut(s) 1900
PkrI GCNGC 9 cut(s) 453, 609, 793, 1225, 1494, 1591, 1600, 2041, 2044
PleI GAGTC 3 cut(s) 828, 1395, 1920
PmaCI CACGTG 2 cut(s) 1577, 1760
PmlI CACGTG 2 cut(s) 1577, 1760
PpsI GAGTC 3 cut(s) 828, 1395, 1920
Ppu21I YACGTR 2 cut(s) 1577, 1760
PspCI CACGTG 2 cut(s) 1577, 1760
PspEI GGTNACC 1 cut(s) 2264
PspFI CCCAGC 1 cut(s) 1007
PspN4I GGNNCC 2 cut(s) 968, 1788
PspPI GGNCC 2 cut(s) 967, 1786
PstI CTGCAG 2 cut(s) 793, 1216
PstNI CAGNNNCTG 1 cut(s) 656
PvuII CAGCTG 2 cut(s) 41, 2183
RsaI GTAC 5 cut(s) 192, 936, 1756, 1835, 2233
RsaNI GTAC 5 cut(s) 191, 935, 1755, 1834, 2232
RseI CAYNNNNRTG 1 cut(s) 1539
SaqAI TTAA 2 cut(s) 1581, 2126
SatI GCNGC 9 cut(s) 452, 608, 792, 1224, 1493, 1590, 1599, 2040, 2043
Sau3AI GATC 3 cut(s) 226, 349, 1981
Sau96I GGNCC 2 cut(s) 967, 1786
SchI GAGTC 3 cut(s) 828, 1396, 1921
ScrFI CCNGG 2 cut(s) 771, 2270
SduI GDGCHC 1 cut(s) 1930
SfaNI GCATC 6 cut(s) 164, 695, 850, 1726, 1876, 1898
SfcI CTRYAG 2 cut(s) 789, 1212
SmiMI CAYNNNNRTG 1 cut(s) 1539
SmlI CTYRAG 1 cut(s) 1991
SmoI CTYRAG 1 cut(s) 1991
SsiI CCGC 9 cut(s) 242, 452, 488, 566, 605, 608, 1444, 2118, 2256
SspI AATATT 1 cut(s) 904
SspMI CTAG 4 cut(s) 57, 63, 1262, 1916
StyD4I CCNGG 2 cut(s) 769, 2268
StyI CCWWGG 1 cut(s) 1241
TaaI ACNGT 3 cut(s) 249, 1899, 2231
TaiI ACGT 4 cut(s) 347, 599, 1579, 1762
TaqI TCGA 3 cut(s) 1930, 1984, 2103
TatI WGTACW 3 cut(s) 1754, 1833, 2231
TauI GCSGC 2 cut(s) 454, 610
TfiI GAWTC 8 cut(s) 95, 104, 214, 653, 1133, 1294, 1335, 1608
Tru1I TTAA 2 cut(s) 1581, 2126
Tru9I TTAA 2 cut(s) 1581, 2126
TscAI CASTG 5 cut(s) 216, 252, 390, 982, 993
TseFI GTSAC 1 cut(s) 597
TseI GCWGC 7 cut(s) 791, 1223, 1492, 1589, 1598, 2039, 2042
Tsp45I GTSAC 1 cut(s) 597
TspDTI ATGAA 8 cut(s) 246, 1018, 1125, 1275, 1518, 1529, 1610, 1638
TspGWI ACGGA 2 cut(s) 178, 1888
TspRI CASTG 5 cut(s) 216, 252, 390, 982, 993
Van91I CCANNNNNTGG 1 cut(s) 1900
XapI RAATTY 4 cut(s) 283, 882, 1204, 1403
XcmI CCANNNNNNNNNTGG 1 cut(s) 1729
XmnI GAANNNNTTC 1 cut(s) 1183
XspI CTAG 4 cut(s) 57, 63, 1262, 1916
Zsp2I ATGCAT 1 cut(s) 1891
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.