Rh4CG371600

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
62603731 .. 62607444
3714 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG371600.1

Sequence Viewer

Length: 1821 bp
ATGGCAACCACATCGCCATCTCCGAACTCATCTCCTTCAGCTGTGCCACCAGCTTCTAGTACTAGTTCCACACCACCACCACAGCCCAATGTGGAATCACCAGATTCCTCAAACACTACAACTCAATCTCCACAGCCTGATGTTCCATCAGCTCCTCCTCCAACTGCATCATCACCCCCTCCAATTCCATCCCCCCCTTCCGTACCTACACCATCACCTCCAATGAATCAACAATCTGATCCGCCAGCCTCACCGCCACCGCCTTCTTCATCCAATGTGCCTCCACCATCTTCAAATTCTCCACCCCCACCATCATCTGACCCACCAAAGAGTTCACCTTCCCCAACACCACCAACGTCTGATCCACCTGCAAGTTCACCTCCCCCACCGCAGCCAGTCAGCTCACCTCCCCCACCACAGCCAGTGAGTTCACCTCCACCACCAACTTCAAGTCCACCTAAGACTTCACCTCCACCTCCATCATCAACGCCGCCCAAAAGTTCACCTCCGCCACCATCAGAGCCACCTGAGAAATCTCCTCCACCTCCACCAGCAAATCCCCCTGAAACATCACCACCGCCTCCACCAACATCAAAGCCCCCTGAAACGTCACCACCAACATCAAAGCCACCTGAGAAATCACCACCACCTCCAGAATCTGAGCCACCCAAAAGTTCACCTCCACCACCAGCATCAACTCCTCCTAAAAGTTCACCTCCTCCACAGGCATCAGAGCCTCCAAGCAGTTCACCCCCACCTTCAAGCCCCAACCCTCCCCCTCCACCCGGTTCTCAACCAACCCCTGCAGCCCCACCTCCGAAGTCATCAGCTCCACCACCCACAATACGACTCTCACCACCCCCACCCTCAGATGATGCTCCACCACCAACTACTCAAATTCCAAGCCCGCCATCAAATATTCCAAGTTCAAACAATTCCAATCCTAATGTACCACCAAGTTCAAATGCCACAAGTAATAGGGGTCTTAGCACTGGAGGTGCAGTGGCAATTAGTGTAGTGGCTGGGATAATAGTGCTTAGCTTCATTGCATTCGCTGTATGGTGCATGAGGAGGAAGCAAAAGAAAAAGGTTTCTGGGTTTGGAGGTTATGTTATGCCATCGCCGATGGTATCTTCTCCCCAATCAGATTCATCATCATTCTTGAAGGCACATTCTTCAGCTCCCCTTATAGGAAGTGGTTCTGGCAGTGATTTCGTGAATTCTCCTGCAGAACCGGCAGGAGGCAATTCAAGACCTTGGCTGCTTGTCTATGAATATGTCTCTAATGATACCCTCTATTTCCATCTTCATGGAGAAGGTAGGCCAGTTCTTGACTGGGCAACACGTGTTAAAGTTGCTGCTGGTGCAGCTCGTGGAATCGCCTATCTTCATGAAGACTGCCATCCTCGCATTATTCACAGGGATATAAAGTCATCAAACATTCTATTAGATAACAACTTTGAAGCTCGGGCTCGACCCTTATTGGGTTATGCTCTTGATAATGAGGAGTTTGAAGGTTTGGTTGATCCAAGGCTTGAGAAGAACTATGTTGAAAGTGAAGTATTCAGACTGATTGAGATTGCTGCTGCTTGTGTGCGACACTCATCTGCTAAGAGACCACGAATGGGACAGGTTGTTAGAGCTTTCGATAGTATGGCCACCTCCGATTTAACCAATGGAATGAGAGTAGGGGAAAGTGAGACATTCAACTCGGCTCAACAATCAGCTGAAATTAGATTGTTTCGGAGAATGGCATTTGGTAGTCAAAATTACAGTACAGATTTTTTTAGCGAAGGTAGCGGGAATGGTAACCTGGTATAG

Protein Analysis

606

Amino Acids

62.58

Weight (kDa)

6.21

Isoelectric Point (pI)

100.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 417 - 487 1.7e-07 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 420 - 486 1.7e-08 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 376
Acc36I ACCTGC 1 cut(s) 376
AciI CCGC 9 cut(s) 242, 254, 260, 389, 491, 509, 578, 908, 1800
AclWI GGATC 3 cut(s) 233, 356, 1520
AcoI YGGCCR 1 cut(s) 1656
AcsI RAATTY 3 cut(s) 295, 897, 1219
AcuI CTGAAG 2 cut(s) 21, 1161
AcvI CACGTG 1 cut(s) 1346
AfaI GTAC 4 cut(s) 61, 204, 951, 1777
AfiI CCNNNNNNNGG 5 cut(s) 785, 1190, 1241, 1484, 1625
AflIII ACRYGT 2 cut(s) 1343, 1345
AhlI ACTAGT 1 cut(s) 62
AjnI CCWGG 1 cut(s) 1812
Alw26I GTCTC 3 cut(s) 1285, 1609, 1694
AlwI GGATC 3 cut(s) 233, 356, 1520
AlwNI CAGNNNCTG 1 cut(s) 659
Ama87I CYCGRG 1 cut(s) 1467
AoxI GGCC 2 cut(s) 1322, 1656
ApeKI GCWGC 7 cut(s) 391, 806, 1261, 1358, 1367, 1583, 1586
ApoI RAATTY 3 cut(s) 295, 897, 1219
Asp700I GAANNNNTTC 1 cut(s) 1198
AsuC2I CCSGG 1 cut(s) 786
AvaI CYCGRG 1 cut(s) 1467
BalI TGGCCA 1 cut(s) 1658
BanII GRGCYC 1 cut(s) 1474
BauI CACGAG 1 cut(s) 1371
BbrPI CACGTG 1 cut(s) 1346
BbsI GAAGAC 1 cut(s) 1401
BbvI GCAGC 7 cut(s) 403, 818, 1248, 1345, 1379, 1570, 1573
BcgI CGANNNNNNTGC 3 cut(s) 28, 1195, 1229
BciT130I CCWGG 1 cut(s) 1814
BcnI CCSGG 1 cut(s) 786
BcoDI GTCTC 3 cut(s) 1285, 1609, 1694
BcuI ACTAGT 1 cut(s) 62
BfaI CTAG 2 cut(s) 57, 63
BfmI CTRYAG 2 cut(s) 804, 1227
BfuAI ACCTGC 1 cut(s) 376
BisI GCNGC 8 cut(s) 392, 491, 807, 1262, 1359, 1368, 1584, 1587
BlpI GCTNAGC 1 cut(s) 1037
BlsI GCNGC 8 cut(s) 393, 492, 808, 1263, 1360, 1369, 1585, 1588
BmcAI AGTACT 1 cut(s) 61
Bme1390I CCNGG 2 cut(s) 786, 1814
BmeT110I CYCGRG 1 cut(s) 1467
BmrFI CCNGG 2 cut(s) 786, 1814
BmrI ACTGGG 1 cut(s) 1345
BmsI GCATC 4 cut(s) 176, 701, 737, 865
BmuI ACTGGG 1 cut(s) 1345
BpiI GAAGAC 1 cut(s) 1401
BplI GAGNNNNNCTC 2 cut(s) 418, 450
BpmI CTGGAG 2 cut(s) 636, 1014
Bpu1102I GCTNAGC 1 cut(s) 1037
BpuEI CTTGAG 1 cut(s) 1556
BpuMI CCSGG 1 cut(s) 786
BsaAI YACGTR 1 cut(s) 1346
BsaI GGTCTC 1 cut(s) 1609
BsaJI CCNNGG 2 cut(s) 1256, 1529
BsaXI ACNNNNNCTCC 8 cut(s) 112, 142, 454, 484, 987, 1017, 1095, 1125
Bsc4I CCNNNNNNNGG 5 cut(s) 785, 1190, 1241, 1484, 1625
Bse118I RCCGGY 1 cut(s) 1234
Bse1I ACTGG 5 cut(s) 395, 422, 997, 1325, 1340
Bse3DI GCAATG 1 cut(s) 1044
BseBI CCWGG 1 cut(s) 1814
BseDI CCNNGG 2 cut(s) 1256, 1529
BseGI GGATG 3 cut(s) 188, 269, 1402
BseLI CCNNNNNNNGG 5 cut(s) 785, 1190, 1241, 1484, 1625
BseMI GCAATG 1 cut(s) 1044
BseMII CTCAG 4 cut(s) 519, 624, 651, 882
BseNI ACTGG 5 cut(s) 395, 422, 997, 1325, 1340
BseRI GAGGAG 7 cut(s) 144, 147, 528, 690, 708, 1084, 1520
BseXI GCAGC 7 cut(s) 403, 818, 1248, 1345, 1379, 1570, 1573
BseYI CCCAGC 1 cut(s) 1022
BsgI GTGCAG 2 cut(s) 1020, 1386
BshFI GGCC 2 cut(s) 1324, 1658
BsiHKCI CYCGRG 1 cut(s) 1467
BsiSI CCGG 2 cut(s) 786, 1235
BslFI GGGAC 1 cut(s) 1641
BslI CCNNNNNNNGG 5 cut(s) 785, 1190, 1241, 1484, 1625
BsmAI GTCTC 3 cut(s) 1285, 1609, 1694
BsmFI GGGAC 1 cut(s) 1641
BsmI GAATGC 1 cut(s) 1049
BsnI GGCC 2 cut(s) 1324, 1658
Bso31I GGTCTC 1 cut(s) 1609
BsoBI CYCGRG 1 cut(s) 1467
Bsp1286I GDGCHC 1 cut(s) 1474
Bsp143I GATC 3 cut(s) 238, 361, 1525
Bsp1720I GCTNAGC 1 cut(s) 1037
BspACI CCGC 9 cut(s) 242, 254, 260, 389, 491, 509, 578, 908, 1800
BspANI GGCC 2 cut(s) 1324, 1658
BspCNI CTCAG 4 cut(s) 520, 625, 652, 881
BspHI TCATGA 1 cut(s) 1390
BspMAI CTGCAG 2 cut(s) 808, 1231
BspMI ACCTGC 1 cut(s) 376
BspPI GGATC 3 cut(s) 233, 356, 1520
BspTNI GGTCTC 1 cut(s) 1609
BsrDI GCAATG 1 cut(s) 1044
BsrFI RCCGGY 1 cut(s) 1234
BsrI ACTGG 5 cut(s) 395, 422, 997, 1325, 1340
BssAI RCCGGY 1 cut(s) 1234
BssECI CCNNGG 2 cut(s) 1256, 1529
BssMI GATC 3 cut(s) 238, 361, 1525
BssSI CACGAG 1 cut(s) 1371
BssT1I CCWWGG 2 cut(s) 1256, 1529
Bst2BI CACGAG 1 cut(s) 1371
Bst2UI CCWGG 1 cut(s) 1814
Bst4CI ACNGT 1 cut(s) 1775
BstBAI YACGTR 1 cut(s) 1346
BstC8I GCNNGC 2 cut(s) 246, 908
BstDEI CTNAG 8 cut(s) 459, 528, 633, 660, 868, 986, 1037, 1611
BstEII GGTNACC 1 cut(s) 1808
BstF5I GGATG 3 cut(s) 188, 269, 1402
BstKTI GATC 3 cut(s) 241, 364, 1528
BstMAI GTCTC 3 cut(s) 1285, 1609, 1694
BstMBI GATC 3 cut(s) 238, 361, 1525
BstMWI GCNNNNNNNGC 5 cut(s) 1235, 1364, 1367, 1407, 1797
BstNI CCWGG 1 cut(s) 1814
BstPI GGTNACC 1 cut(s) 1808
BstSCI CCNGG 2 cut(s) 784, 1812
BstSFI CTRYAG 2 cut(s) 804, 1227
BstV1I GCAGC 7 cut(s) 403, 818, 1248, 1345, 1379, 1570, 1573
BstV2I GAAGAC 1 cut(s) 1401
BstXI CCANNNNNNTGG 1 cut(s) 1310
BsuRI GGCC 2 cut(s) 1324, 1658
BtgZI GCGATG 1 cut(s) 1104
BtsCI GGATG 3 cut(s) 188, 269, 1402
BtsI GCAGTG 2 cut(s) 1008, 1213
BtsIMutI CAGTG 4 cut(s) 429, 990, 1008, 1213
BveI ACCTGC 1 cut(s) 376
Cac8I GCNNGC 2 cut(s) 246, 908
CaiI CAGNNNCTG 1 cut(s) 659
CciI TCATGA 1 cut(s) 1390
Cfr10I RCCGGY 1 cut(s) 1234
CsiI ACCWGGT 1 cut(s) 1812
Csp6I GTAC 4 cut(s) 60, 203, 950, 1776
CviAII CATG 3 cut(s) 1066, 1310, 1391
CviQI GTAC 4 cut(s) 60, 203, 950, 1776
DdeI CTNAG 8 cut(s) 459, 528, 633, 660, 868, 986, 1037, 1611
DpnI GATC 3 cut(s) 240, 363, 1527
DpnII GATC 3 cut(s) 238, 361, 1525
EaeI YGGCCR 1 cut(s) 1656
EciI GGCGGA 2 cut(s) 231, 498
Eco130I CCWWGG 2 cut(s) 1256, 1529
Eco24I GRGCYC 1 cut(s) 1474
Eco31I GGTCTC 1 cut(s) 1609
Eco57I CTGAAG 2 cut(s) 21, 1161
Eco72I CACGTG 1 cut(s) 1346
Eco88I CYCGRG 1 cut(s) 1467
Eco91I GGTNACC 1 cut(s) 1808
EcoO65I GGTNACC 1 cut(s) 1808
EcoRI GAATTC 1 cut(s) 1219
EcoRII CCWGG 1 cut(s) 1812
EcoT14I CCWWGG 2 cut(s) 1256, 1529
EcoT38I GRGCYC 1 cut(s) 1474
ErhI CCWWGG 2 cut(s) 1256, 1529
FaeI CATG 3 cut(s) 1069, 1313, 1394
FaqI GGGAC 1 cut(s) 1641
FatI CATG 3 cut(s) 1065, 1309, 1390
FauI CCCGC 2 cut(s) 915, 1793
Fnu4HI GCNGC 8 cut(s) 392, 491, 807, 1262, 1359, 1368, 1584, 1587
FokI GGATG 3 cut(s) 175, 256, 1389
FriOI GRGCYC 1 cut(s) 1474
Fsp4HI GCNGC 8 cut(s) 392, 491, 807, 1262, 1359, 1368, 1584, 1587
FspBI CTAG 2 cut(s) 57, 63
GluI GCNGC 8 cut(s) 392, 491, 807, 1262, 1359, 1368, 1584, 1587
GsaI CCCAGC 1 cut(s) 1026
GsuI CTGGAG 2 cut(s) 636, 1014
HaeIII GGCC 2 cut(s) 1324, 1658
HapII CCGG 2 cut(s) 786, 1235
Hin1II CATG 3 cut(s) 1069, 1313, 1394
HinfI GANTC 7 cut(s) 95, 104, 226, 656, 849, 1148, 1377
HpaII CCGG 2 cut(s) 786, 1235
Hpy166II GTNNAC 8 cut(s) 335, 377, 431, 455, 503, 677, 713, 749
Hpy188III TCNNGA 7 cut(s) 653, 1162, 1216, 1251, 1331, 1391, 1496
Hpy8I GTNNAC 8 cut(s) 335, 377, 431, 455, 503, 677, 713, 749
HpyAV CCTTC 9 cut(s) 45, 207, 273, 348, 768, 1159, 1310, 1508, 1787
HpyCH4III ACNGT 1 cut(s) 1775
HpyCH4IV ACGT 3 cut(s) 356, 608, 1345
HpyCH4V TGCA 8 cut(s) 167, 371, 806, 1001, 1049, 1065, 1229, 1367
HpyF10VI GCNNNNNNNGC 5 cut(s) 1235, 1364, 1367, 1407, 1797
HpyF3I CTNAG 8 cut(s) 459, 528, 633, 660, 868, 986, 1037, 1611
HpySE526I ACGT 3 cut(s) 356, 608, 1345
Hsp92II CATG 3 cut(s) 1069, 1313, 1394
Kzo9I GATC 3 cut(s) 238, 361, 1525
LmnI GCTCC 4 cut(s) 157, 835, 883, 1186
Lsp1109I GCAGC 7 cut(s) 403, 818, 1248, 1345, 1379, 1570, 1573
LweI GCATC 4 cut(s) 176, 701, 737, 865
MabI ACCWGGT 1 cut(s) 1812
MaeI CTAG 2 cut(s) 57, 63
MaeII ACGT 3 cut(s) 356, 608, 1345
MaeIII GTNAC 2 cut(s) 609, 1808
MalI GATC 3 cut(s) 240, 363, 1527
MboI GATC 3 cut(s) 238, 361, 1525
MboII GAAGA 8 cut(s) 258, 282, 1125, 1167, 1298, 1379, 1406, 1552
MhlI GDGCHC 1 cut(s) 1474
MlsI TGGCCA 1 cut(s) 1658
MluCI AATT 9 cut(s) 183, 295, 897, 934, 1008, 1219, 1246, 1731, 1768
MluNI TGGCCA 1 cut(s) 1658
MlyI GAGTC 1 cut(s) 843
MmeI TCCRAC 1 cut(s) 185
Mox20I TGGCCA 1 cut(s) 1658
MroXI GAANNNNTTC 1 cut(s) 1198
MscI TGGCCA 1 cut(s) 1658
MseI TTAA 2 cut(s) 1350, 1670
MslI CAYNNNNRTG 1 cut(s) 1308
Msp20I TGGCCA 1 cut(s) 1658
MspA1I CMGCKG 2 cut(s) 41, 1727
MspI CCGG 2 cut(s) 786, 1235
MspR9I CCNGG 2 cut(s) 786, 1814
Mva1269I GAATGC 1 cut(s) 1049
MvaI CCWGG 1 cut(s) 1814
MwoI GCNNNNNNNGC 5 cut(s) 1235, 1364, 1367, 1407, 1797
NciI CCSGG 1 cut(s) 786
NdeII GATC 3 cut(s) 238, 361, 1525
NlaIII CATG 3 cut(s) 1069, 1313, 1394
NmeAIII GCCGAG 1 cut(s) 1691
NmuCI GTSAC 1 cut(s) 609
PagI TCATGA 1 cut(s) 1390
PaqCI CACCTGC 1 cut(s) 376
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 1 cut(s) 1049
PdmI GAANNNNTTC 1 cut(s) 1198
PfeI GAWTC 6 cut(s) 95, 104, 226, 656, 1148, 1377
PkrI GCNGC 8 cut(s) 393, 492, 808, 1263, 1360, 1369, 1585, 1588
PleI GAGTC 1 cut(s) 843
PmaCI CACGTG 1 cut(s) 1346
PmlI CACGTG 1 cut(s) 1346
PpsI GAGTC 1 cut(s) 843
Ppu21I YACGTR 1 cut(s) 1346
Psp6I CCWGG 1 cut(s) 1812
PspCI CACGTG 1 cut(s) 1346
PspEI GGTNACC 1 cut(s) 1808
PspFI CCCAGC 1 cut(s) 1022
PspGI CCWGG 1 cut(s) 1812
PstI CTGCAG 2 cut(s) 808, 1231
PstNI CAGNNNCTG 1 cut(s) 659
PvuII CAGCTG 2 cut(s) 41, 1727
RsaI GTAC 4 cut(s) 61, 204, 951, 1777
RsaNI GTAC 4 cut(s) 60, 203, 950, 1776
RseI CAYNNNNRTG 1 cut(s) 1308
SaqAI TTAA 2 cut(s) 1350, 1670
SatI GCNGC 8 cut(s) 392, 491, 807, 1262, 1359, 1368, 1584, 1587
Sau3AI GATC 3 cut(s) 238, 361, 1525
ScaI AGTACT 1 cut(s) 61
SchI GAGTC 1 cut(s) 843
ScrFI CCNGG 2 cut(s) 786, 1814
SduI GDGCHC 1 cut(s) 1474
SexAI ACCWGGT 1 cut(s) 1812
SfaNI GCATC 4 cut(s) 176, 701, 737, 865
SfcI CTRYAG 2 cut(s) 804, 1227
SmiMI CAYNNNNRTG 1 cut(s) 1308
SmlI CTYRAG 1 cut(s) 1535
SmoI CTYRAG 1 cut(s) 1535
SpeI ACTAGT 1 cut(s) 62
Sse9I AATT 9 cut(s) 183, 295, 897, 934, 1008, 1219, 1246, 1731, 1768
SsiI CCGC 9 cut(s) 242, 254, 260, 389, 491, 509, 578, 908, 1800
SspI AATATT 1 cut(s) 919
SspMI CTAG 2 cut(s) 57, 63
StyD4I CCNGG 2 cut(s) 784, 1812
StyI CCWWGG 2 cut(s) 1256, 1529
TaaI ACNGT 1 cut(s) 1775
TaiI ACGT 3 cut(s) 359, 611, 1348
TaqI TCGA 2 cut(s) 1474, 1647
TasI AATT 9 cut(s) 183, 295, 897, 934, 1008, 1219, 1246, 1731, 1768
TatI WGTACW 2 cut(s) 59, 1775
TauI GCSGC 1 cut(s) 493
TfiI GAWTC 6 cut(s) 95, 104, 226, 656, 1148, 1377
Tru1I TTAA 2 cut(s) 1350, 1670
Tru9I TTAA 2 cut(s) 1350, 1670
TscAI CASTG 4 cut(s) 429, 997, 1008, 1213
TseFI GTSAC 1 cut(s) 609
TseI GCWGC 7 cut(s) 391, 806, 1261, 1358, 1367, 1583, 1586
Tsp45I GTSAC 1 cut(s) 609
TspDTI ATGAA 8 cut(s) 239, 258, 1033, 1140, 1287, 1298, 1379, 1407
TspGWI ACGGA 1 cut(s) 190
TspRI CASTG 4 cut(s) 429, 997, 1008, 1213
XapI RAATTY 3 cut(s) 295, 897, 1219
XcmI CCANNNNNNNNNTGG 1 cut(s) 1332
XmnI GAANNNNTTC 1 cut(s) 1198
XspI CTAG 2 cut(s) 57, 63
ZrmI AGTACT 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.