Rh4AG348400

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Reverse (-)
65650075 .. 65653831
3757 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG348400.1

Sequence Viewer

Length: 2112 bp
ATGGCAACCACATCGCCATCTCCGAACTCATCTCCTTCAGCTGTGCCACCAACTTCTAGTGCTAGTTCCACACCACCACCACAGCCCAATGTGGAATCACCAGATTCCTCAAACACTGCAACTCAATCTCCACCGCCTGATGTTCCATCAGCTCCTCCTCCAACTGCATCATCACCCCCTCCAATTCCATCCTCCCCTTCCGTACCTGCACCATCACCTCCAGTGAATCAACAATCTGATCCACCAGCCTCACCGCCACCGCCTTCTTCATCCAATGTGCCTCCACCATCTTCAAATTCTCCACCCCCACCATCATCTGACCCACCAAAGAGTTCACCTTCCCCACCGCCACCAACGTCTGATCCACCTGCAAGTTCACCTCCCCCACCACAGCCAGTGAGTTCACCTCCACCACCAACTTCAAGTCCACCTAAGACTTCACCTCCACCTCCATCATCAACGCCGCCCAAAAGTTCACCTCCACCTCCATCATCAACGCCGCCCAAAAGTTCACCTCCACCTCCATCATCAACACCGCCCAAAAGTTCACCATCAGAGCCACCTGAGAAATCTCCTCCACCTCCACCAGCAAATCCCCCTGAAACATCACCACCGCCTCCACCAACATTAAAGCCCCCTGAAACGTCACCACCGCCACCACCAACATCAAAGCCACCTGAGAAATCACCACCACCTCCAGAATCTGAGCCACCCAAAAGTTCACCTCCACCACCAGCATCAACTCCTCCTAAAAGTTCACCTCCTCCACAGGCATCAGAGCCTCCAAGCAGTTCACCCCCACCTTCAAGCCCCAACCCTCCCCCTCCACCCAGTTCTCAACCAACCCCTGCAGCCCCACCTCCGAAGTCATCAGCTCCACCACCCACAATACGACTCTCACCACCTCCACCCGCAGATGATGCTCCACCACCAACTACTCAAATTCCAAGCCCACCATCAAATATTCCAAGTTCAAACAATTCCAATCCTAATGTACCACCAAGTTCAAATGCCACAAGTAATAGGGGCCTTAGCACTGGAGGTGCAGTGGCAATTAGTGTAGTGGCTTTGATAATAGTGCTTAGCTTCATTGCATTCGCTGTATGGTGCATGAGGAGGAAGCAAAAGAAAAAGGTTTCTGGATTTGGAGGTTATGTTATGCCATCGCCGATGGTATCTTCTCCCCAATCAGATTCATCATCATTCTTGAAGGCACATTCTTCAGCTCCCCTTATAGGAAGTGGTTCTGGCAGTGATTTCATGAATTCTCCTGCAGAACCGGCAGCAGGCAATTCAAGACCTTGGTTTACTTATGACGAACTAGCTAAGGCTACAAATGGCTTTTCATCTCAGAATCTTTTGGGGGAAGGTGGATTTGGCTCTGTATATAAGGGAATCCTGCCAGATGATAGAGAGGTGGCAGTAAAACAATTGAAAATAGGTGGGAGTCAGGGTGAGAGAGAATTCAAAGCTGAAGTTGAGACCATTAGTCGTGTTCACCACCGCCATTTGGTTTCTTTGGTGGGCTATTGCATTTCTGAGAACCAAAGGCTGCTTGTCTATGAATATGTCCCTAATGATACCCTCTATTTCCATCTTCATGGAGAAGGTAGGCCAGTTCTTGACTGGGCAACACGTGTTAAAGTTGCTGCTGGTGCAGCTCGTGGAATCGCCTATCTTCATGAAGACTGCCATCCTCGCATTATTCACAGGGATATAAAGTCATCAAACATTCTATTAGATAACAACTTTGAAGCTCGGGCTCGACCCTTATTGGGTTATGCTCTTGATAATGAGGAGTTTGAAGGTTTGGTTGATCCAAGGCTTGAGAAGAACTATGTTGAGAGTGAAGTGTTCAGACTGATTGAGATTGCTGCTGCTTGTGTGCGACACTCATCTGCTAAGAGACCACGAATGGGACAGGTTGTTAGAGCTTTCGATAGTATGGCCACCGCCGATTTGACCAATGGAATGAGAGTAGGGGAAAGTGAGACATTCAACTCGGCTCAACAATCAGCTGAAATTAGATTGTTTCGGAGAATGGCATTTGGTAGTCAAAATTACAGTACAGATTTTTTTAGCGAAGGTAGCGGGAATGGTAACCCGGTATAG

Protein Analysis

703

Amino Acids

73.05

Weight (kDa)

6.58

Isoelectric Point (pI)

93.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 449 - 583 3.5e-23 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 451 - 584 1.2e-24 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 376
Acc36I ACCTGC 2 cut(s) 214, 376
AclWI GGATC 3 cut(s) 233, 356, 1811
AcoI YGGCCR 1 cut(s) 1947
AcsI RAATTY 4 cut(s) 295, 942, 1264, 1463
AcuI CTGAAG 3 cut(s) 21, 1206, 1494
AcvI CACGTG 1 cut(s) 1637
AfaI GTAC 3 cut(s) 204, 996, 2068
AfiI CCNNNNNNNGG 5 cut(s) 1235, 1286, 1510, 1775, 1916
AflIII ACRYGT 2 cut(s) 1634, 1636
AhdI GACNNNNNGTC 1 cut(s) 1488
AjuI GAANNNNNNNTTGG 2 cut(s) 1359, 1391
Alw26I GTCTC 3 cut(s) 1475, 1900, 1985
AlwI GGATC 3 cut(s) 233, 356, 1811
AlwNI CAGNNNCTG 1 cut(s) 704
Ama87I CYCGRG 1 cut(s) 1758
AoxI GGCC 3 cut(s) 1027, 1613, 1947
ApeKI GCWGC 7 cut(s) 851, 1283, 1552, 1649, 1658, 1874, 1877
ApoI RAATTY 4 cut(s) 295, 942, 1264, 1463
Asp700I GAANNNNTTC 1 cut(s) 1243
AspS9I GGNCC 1 cut(s) 1027
AsuC2I CCSGG 1 cut(s) 2105
AvaI CYCGRG 1 cut(s) 1758
BalI TGGCCA 1 cut(s) 1949
BanII GRGCYC 1 cut(s) 1765
BauI CACGAG 1 cut(s) 1662
BbrPI CACGTG 1 cut(s) 1637
BbsI GAAGAC 1 cut(s) 1692
BbvI GCAGC 7 cut(s) 863, 1295, 1539, 1636, 1670, 1861, 1864
BcgI CGANNNNNNTGC 1 cut(s) 28
BcnI CCSGG 1 cut(s) 2105
BcoDI GTCTC 3 cut(s) 1475, 1900, 1985
BfaI CTAG 3 cut(s) 57, 63, 1322
BfmI CTRYAG 2 cut(s) 849, 1272
BfuAI ACCTGC 2 cut(s) 214, 376
BisI GCNGC 9 cut(s) 464, 500, 852, 1284, 1553, 1650, 1659, 1875, 1878
BlpI GCTNAGC 1 cut(s) 1082
BlsI GCNGC 9 cut(s) 465, 501, 853, 1285, 1554, 1651, 1660, 1876, 1879
Bme1390I CCNGG 1 cut(s) 2105
BmeRI GACNNNNNGTC 1 cut(s) 1488
BmeT110I CYCGRG 1 cut(s) 1758
BmgT120I GGNCC 1 cut(s) 1027
BmiI GGNNCC 1 cut(s) 1028
BmrFI CCNGG 1 cut(s) 2105
BmrI ACTGGG 2 cut(s) 825, 1636
BmsI GCATC 4 cut(s) 176, 746, 782, 910
BmuI ACTGGG 2 cut(s) 825, 1636
BpiI GAAGAC 1 cut(s) 1692
BplI GAGNNNNNCTC 2 cut(s) 391, 423
BpmI CTGGAG 3 cut(s) 204, 681, 1059
Bpu10I CCTNAGC 2 cut(s) 1031, 1326
Bpu1102I GCTNAGC 1 cut(s) 1082
BpuEI CTTGAG 1 cut(s) 1847
BpuMI CCSGG 1 cut(s) 2105
BsaAI YACGTR 1 cut(s) 1637
BsaI GGTCTC 2 cut(s) 1475, 1900
BsaJI CCNNGG 2 cut(s) 1301, 1820
Bsc4I CCNNNNNNNGG 5 cut(s) 1235, 1286, 1510, 1775, 1916
Bse118I RCCGGY 1 cut(s) 1279
Bse1I ACTGG 6 cut(s) 221, 395, 831, 1042, 1616, 1631
Bse3DI GCAATG 1 cut(s) 1089
BseDI CCNNGG 2 cut(s) 1301, 1820
BseGI GGATG 3 cut(s) 188, 269, 1693
BseLI CCNNNNNNNGG 5 cut(s) 1235, 1286, 1510, 1775, 1916
BseMI GCAATG 1 cut(s) 1089
BseMII CTCAG 5 cut(s) 555, 669, 696, 1364, 1530
BseNI ACTGG 6 cut(s) 221, 395, 831, 1042, 1616, 1631
BseRI GAGGAG 7 cut(s) 144, 147, 564, 735, 753, 1129, 1811
BseXI GCAGC 7 cut(s) 863, 1295, 1539, 1636, 1670, 1861, 1864
BsgI GTGCAG 3 cut(s) 192, 1065, 1677
BshFI GGCC 3 cut(s) 1029, 1615, 1949
BsiHKCI CYCGRG 1 cut(s) 1758
BsiSI CCGG 2 cut(s) 1280, 2105
BslFI GGGAC 2 cut(s) 1556, 1932
BslI CCNNNNNNNGG 5 cut(s) 1235, 1286, 1510, 1775, 1916
BsmAI GTCTC 3 cut(s) 1475, 1900, 1985
BsmFI GGGAC 2 cut(s) 1556, 1932
BsmI GAATGC 1 cut(s) 1094
BsnI GGCC 3 cut(s) 1029, 1615, 1949
Bso31I GGTCTC 2 cut(s) 1475, 1900
BsoBI CYCGRG 1 cut(s) 1758
Bsp1286I GDGCHC 1 cut(s) 1765
Bsp143I GATC 3 cut(s) 238, 361, 1816
Bsp1720I GCTNAGC 1 cut(s) 1082
BspANI GGCC 3 cut(s) 1029, 1615, 1949
BspCNI CTCAG 5 cut(s) 556, 670, 697, 1363, 1531
BspHI TCATGA 2 cut(s) 1260, 1681
BspLI GGNNCC 1 cut(s) 1028
BspMAI CTGCAG 2 cut(s) 853, 1276
BspMI ACCTGC 2 cut(s) 214, 376
BspPI GGATC 3 cut(s) 233, 356, 1811
BspTNI GGTCTC 2 cut(s) 1475, 1900
BsrDI GCAATG 1 cut(s) 1089
BsrFI RCCGGY 1 cut(s) 1279
BsrI ACTGG 6 cut(s) 221, 395, 831, 1042, 1616, 1631
BssAI RCCGGY 1 cut(s) 1279
BssECI CCNNGG 2 cut(s) 1301, 1820
BssMI GATC 3 cut(s) 238, 361, 1816
BssSI CACGAG 1 cut(s) 1662
BssT1I CCWWGG 2 cut(s) 1301, 1820
Bst2BI CACGAG 1 cut(s) 1662
Bst4CI ACNGT 1 cut(s) 2066
BstAPI GCANNNNNTGC 1 cut(s) 920
BstBAI YACGTR 1 cut(s) 1637
BstC8I GCNNGC 1 cut(s) 1288
BstEII GGTNACC 1 cut(s) 2099
BstF5I GGATG 3 cut(s) 188, 269, 1693
BstKTI GATC 3 cut(s) 241, 364, 1819
BstMAI GTCTC 3 cut(s) 1475, 1900, 1985
BstMBI GATC 3 cut(s) 238, 361, 1816
BstMWI GCNNNNNNNGC 6 cut(s) 920, 1280, 1655, 1658, 1698, 2088
BstPI GGTNACC 1 cut(s) 2099
BstSCI CCNGG 1 cut(s) 2103
BstSFI CTRYAG 2 cut(s) 849, 1272
BstV1I GCAGC 7 cut(s) 863, 1295, 1539, 1636, 1670, 1861, 1864
BstV2I GAAGAC 1 cut(s) 1692
BstXI CCANNNNNNTGG 1 cut(s) 1601
BsuRI GGCC 3 cut(s) 1029, 1615, 1949
BtgZI GCGATG 1 cut(s) 1149
BtsCI GGATG 3 cut(s) 188, 269, 1693
BtsI GCAGTG 3 cut(s) 114, 1053, 1258
BtsIMutI CAGTG 6 cut(s) 114, 228, 402, 1035, 1053, 1258
BveI ACCTGC 2 cut(s) 214, 376
Cac8I GCNNGC 1 cut(s) 1288
CaiI CAGNNNCTG 1 cut(s) 704
CciI TCATGA 2 cut(s) 1260, 1681
Cfr10I RCCGGY 1 cut(s) 1279
Cfr13I GGNCC 1 cut(s) 1027
Csp6I GTAC 3 cut(s) 203, 995, 2067
CviAII CATG 4 cut(s) 1111, 1261, 1601, 1682
CviQI GTAC 3 cut(s) 203, 995, 2067
DpnI GATC 3 cut(s) 240, 363, 1818
DpnII GATC 3 cut(s) 238, 361, 1816
DriI GACNNNNNGTC 1 cut(s) 1488
EaeI YGGCCR 1 cut(s) 1947
Eam1105I GACNNNNNGTC 1 cut(s) 1488
Eco130I CCWWGG 2 cut(s) 1301, 1820
Eco24I GRGCYC 1 cut(s) 1765
Eco31I GGTCTC 2 cut(s) 1475, 1900
Eco57I CTGAAG 3 cut(s) 21, 1206, 1494
Eco72I CACGTG 1 cut(s) 1637
Eco88I CYCGRG 1 cut(s) 1758
Eco91I GGTNACC 1 cut(s) 2099
EcoO109I RGGNCCY 1 cut(s) 1027
EcoO65I GGTNACC 1 cut(s) 2099
EcoRI GAATTC 2 cut(s) 1264, 1463
EcoT14I CCWWGG 2 cut(s) 1301, 1820
EcoT38I GRGCYC 1 cut(s) 1765
ErhI CCWWGG 2 cut(s) 1301, 1820
FaeI CATG 4 cut(s) 1114, 1264, 1604, 1685
FaqI GGGAC 2 cut(s) 1556, 1932
FatI CATG 4 cut(s) 1110, 1260, 1600, 1681
FauI CCCGC 2 cut(s) 919, 2084
Fnu4HI GCNGC 9 cut(s) 464, 500, 852, 1284, 1553, 1650, 1659, 1875, 1878
FokI GGATG 3 cut(s) 175, 256, 1680
FriOI GRGCYC 1 cut(s) 1765
Fsp4HI GCNGC 9 cut(s) 464, 500, 852, 1284, 1553, 1650, 1659, 1875, 1878
FspBI CTAG 3 cut(s) 57, 63, 1322
GluI GCNGC 9 cut(s) 464, 500, 852, 1284, 1553, 1650, 1659, 1875, 1878
GsuI CTGGAG 3 cut(s) 204, 681, 1059
HaeIII GGCC 3 cut(s) 1029, 1615, 1949
HapII CCGG 2 cut(s) 1280, 2105
Hin1II CATG 4 cut(s) 1114, 1264, 1604, 1685
HpaII CCGG 2 cut(s) 1280, 2105
Hpy188III TCNNGA 8 cut(s) 698, 1140, 1207, 1261, 1296, 1622, 1682, 1787
HpyCH4III ACNGT 1 cut(s) 2066
HpyCH4IV ACGT 3 cut(s) 356, 644, 1636
HpyF10VI GCNNNNNNNGC 6 cut(s) 920, 1280, 1655, 1658, 1698, 2088
HpySE526I ACGT 3 cut(s) 356, 644, 1636
Hsp92II CATG 4 cut(s) 1114, 1264, 1604, 1685
Kzo9I GATC 3 cut(s) 238, 361, 1816
LmnI GCTCC 4 cut(s) 157, 880, 928, 1231
Lsp1109I GCAGC 7 cut(s) 863, 1295, 1539, 1636, 1670, 1861, 1864
LweI GCATC 4 cut(s) 176, 746, 782, 910
MaeI CTAG 3 cut(s) 57, 63, 1322
MaeII ACGT 3 cut(s) 356, 644, 1636
MaeIII GTNAC 2 cut(s) 645, 2099
MalI GATC 3 cut(s) 240, 363, 1818
MboI GATC 3 cut(s) 238, 361, 1816
MboII GAAGA 8 cut(s) 258, 282, 1170, 1212, 1589, 1670, 1697, 1843
MfeI CAATTG 1 cut(s) 1430
MhlI GDGCHC 1 cut(s) 1765
MlsI TGGCCA 1 cut(s) 1949
MluNI TGGCCA 1 cut(s) 1949
MlyI GAGTC 2 cut(s) 888, 1456
MmeI TCCRAC 1 cut(s) 185
Mox20I TGGCCA 1 cut(s) 1949
MroXI GAANNNNTTC 1 cut(s) 1243
MscI TGGCCA 1 cut(s) 1949
MseI TTAA 2 cut(s) 629, 1641
MslI CAYNNNNRTG 1 cut(s) 1599
Msp20I TGGCCA 1 cut(s) 1949
MspA1I CMGCKG 2 cut(s) 41, 2018
MspI CCGG 2 cut(s) 1280, 2105
MspR9I CCNGG 1 cut(s) 2105
MunI CAATTG 1 cut(s) 1430
Mva1269I GAATGC 1 cut(s) 1094
MwoI GCNNNNNNNGC 6 cut(s) 920, 1280, 1655, 1658, 1698, 2088
NciI CCSGG 1 cut(s) 2105
NdeII GATC 3 cut(s) 238, 361, 1816
NlaIII CATG 4 cut(s) 1114, 1264, 1604, 1685
NlaIV GGNNCC 1 cut(s) 1028
NmeAIII GCCGAG 1 cut(s) 1982
NmuCI GTSAC 1 cut(s) 645
PagI TCATGA 2 cut(s) 1260, 1681
PaqCI CACCTGC 1 cut(s) 376
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 1 cut(s) 1094
PdmI GAANNNNTTC 1 cut(s) 1243
PfeI GAWTC 8 cut(s) 95, 104, 226, 701, 1193, 1354, 1395, 1668
PkrI GCNGC 9 cut(s) 465, 501, 853, 1285, 1554, 1651, 1660, 1876, 1879
PleI GAGTC 2 cut(s) 888, 1455
PmaCI CACGTG 1 cut(s) 1637
PmlI CACGTG 1 cut(s) 1637
PpsI GAGTC 2 cut(s) 888, 1455
Ppu21I YACGTR 1 cut(s) 1637
PspCI CACGTG 1 cut(s) 1637
PspEI GGTNACC 1 cut(s) 2099
PspN4I GGNNCC 1 cut(s) 1028
PspPI GGNCC 1 cut(s) 1027
PstI CTGCAG 2 cut(s) 853, 1276
PstNI CAGNNNCTG 1 cut(s) 704
PvuII CAGCTG 2 cut(s) 41, 2018
RsaI GTAC 3 cut(s) 204, 996, 2068
RsaNI GTAC 3 cut(s) 203, 995, 2067
RseI CAYNNNNRTG 1 cut(s) 1599
SaqAI TTAA 2 cut(s) 629, 1641
SatI GCNGC 9 cut(s) 464, 500, 852, 1284, 1553, 1650, 1659, 1875, 1878
Sau3AI GATC 3 cut(s) 238, 361, 1816
Sau96I GGNCC 1 cut(s) 1027
SchI GAGTC 2 cut(s) 888, 1456
ScrFI CCNGG 1 cut(s) 2105
SduI GDGCHC 1 cut(s) 1765
SfaNI GCATC 4 cut(s) 176, 746, 782, 910
SfcI CTRYAG 2 cut(s) 849, 1272
SmiMI CAYNNNNRTG 1 cut(s) 1599
SmlI CTYRAG 1 cut(s) 1826
SmoI CTYRAG 1 cut(s) 1826
SspI AATATT 1 cut(s) 964
SspMI CTAG 3 cut(s) 57, 63, 1322
StyD4I CCNGG 1 cut(s) 2103
StyI CCWWGG 2 cut(s) 1301, 1820
TaaI ACNGT 1 cut(s) 2066
TaiI ACGT 3 cut(s) 359, 647, 1639
TaqI TCGA 2 cut(s) 1765, 1938
TatI WGTACW 1 cut(s) 2066
TauI GCSGC 2 cut(s) 466, 502
TfiI GAWTC 8 cut(s) 95, 104, 226, 701, 1193, 1354, 1395, 1668
Tru1I TTAA 2 cut(s) 629, 1641
Tru9I TTAA 2 cut(s) 629, 1641
TscAI CASTG 6 cut(s) 121, 228, 402, 1042, 1053, 1258
TseFI GTSAC 1 cut(s) 645
TseI GCWGC 7 cut(s) 851, 1283, 1552, 1649, 1658, 1874, 1877
Tsp45I GTSAC 1 cut(s) 645
TspGWI ACGGA 1 cut(s) 190
TspRI CASTG 6 cut(s) 121, 228, 402, 1042, 1053, 1258
XapI RAATTY 4 cut(s) 295, 942, 1264, 1463
XcmI CCANNNNNNNNNTGG 1 cut(s) 1623
XmnI GAANNNNTTC 1 cut(s) 1243
XspI CTAG 3 cut(s) 57, 63, 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.