Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0007570

Physical Location & Seq

Genomic Coordinates Reverse (-)

57236523 .. 57240279

Gene Structure 3757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG350800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGGCAACCACATCGCCATCTCCGAACTCATCTCCTTCAGCTGTGCCACCAACTTCTAGTGCTAGTTCCACACCACCACCACAGCCCAATGTGGAATCACCAGATTCCTCAAACACTGCAACTCAATCTCCACCGCCTGATGTTCCATCAGCTCCTCCTCCAACTGCATCATCACCCCCTCCAATTCCATCCTCCCCTTCCGTACCTGCACCATCACCTCCAGTGAATCAACAATCTGATCCACCAGCCTCACCGCCACCGCCTTCTTCATCCAATGTGCCTCCACCATCTTCAAATTCTCCACCCCCACCATCATCTGACCCACCAAAGAGTTCACCTTCCCCACCGCCACCAACGTCTGATCCACCTGCAAGTTCACCTCCCCCACCACAGCCAGTGAGTTCACCTCCACCACCAACTTCAAGTCCACCTAAGACTTCACCTCCACCTCCATCATCAACGCCGCCCAAAAGTTCACCTCCACCTCCATCATCAACGCCGCCCAAAAGTTCACCTCCACCTCCATCATCAACACCGCCCAAAAGTTCACCATCAGAGCCACCTGAGAAATCTCCTCCACCTCCACCAGCAAATCCCCCTGAAACATCACCACCGCCTCCACCAACATTAAAGCCCCCTGAAACGTCACCACCGCCACCACCAACATCAAAGCCACCTGAGAAATCACCACCACCTCCAGAATCTGAGCCACCCAAAAGTTCACCTCCACCACCAGCATCAACTCCTCCTAAAAGTTCACCTCCTCCACAGGCATCAGAGCCTCCAAGCAGTTCACCCCCACCTTCAAGCCCCAACCCTCCCCCTCCACCCAGTTCTCAACCAACCCCTGCAGCCCCACCTCCGAAGTCATCAGCTCCACCACCCACAATACGACTCTCACCACCTCCACCCGCAGATGATGCTCCACCACCAACTACTCAAATTCCAAGCCCACCATCAAATATTCCAAGTTCAAACAATTCCAATCCTAATGTACCACCAAGTTCAAATGCCACAAGTAATAGGGGCCTTAGCACTGGAGGTGCAGTGGCAATTAGTGTAGTGGCTTTGATAATAGTGCTTAGCTTCATTGCATTCGCTGTATGGTGCATGAGGAGGAAGCAAAAGAAAAAGGTTTCTGGATTTGGAGGTTATGTTATGCCATCGCCGATGGTATCTTCTCCCCAATCAGATTCATCATCATTCTTGAAGGCACATTCTTCAGCTCCCCTTATAGGAAGTGGTTCTGGCAGTGATTTCATGAATTCTCCTGCAGAACCGGCAGCAGGCAATTCAAGACCTTGGTTTACTTATGACGAACTAGCTAAGGCTACAAATGGCTTTTCATCTCAGAATCTTTTGGGGGAAGGTGGATTTGGCTCTGTATATAAGGGAATCCTGCCAGATGATAGAGAGGTGGCAGTAAAACAATTGAAAATAGGTGGGAGTCAGGGTGAGAGAGAATTCAAAGCTGAAGTTGAGACCATTAGTCGTGTTCACCACCGCCATTTGGTTTCTTTGGTGGGCTATTGCATTTCTGAGAACCAAAGGCTGCTTGTCTATGAATATGTCCCTAATGATACCCTCTATTTCCATCTTCATGGAGAAGGTAGGCCAGTTCTTGACTGGGCAACACGTGTTAAAGTTGCTGCTGGTGCAGCTCGTGGAATCGCCTATCTTCATGAAGACTGCCATCCTCGCATTATTCACAGGGATATAAAGTCATCAAACATTCTATTAGATAACAACTTTGAAGCTCGGGTTTCAGATTTTGGACTTGCCAAATTGTGTCTGGATGCAAATACACATATAAGTACACGTGTCATGGGAACTTTTGGATATGTGGCCCCTGAGTATGCTTCAAGTGGCAAACTGACTGAGAAATCTGATGTGTACTCGTTTGGAGTTGTTCTTCTGGAGTTGATTACTGGACGGAAGGCTGTGGATGCATCCCAACCGTTGGGAGATGAGAGTCTAGTTGAATGGGCTCGACCCTTATTGGGTTATGCTCTTGATAATGAGGAGTTTGAAGGTTTGGTTGATCCAAGGCTTGAGAAGAACTATGTTGAGAGTGAAGTGTTCAGACTGATTGAGATTGCTGCTGCTTGTGTGCGACACTCATCTGCTAAGAGACCACGAATGGGACAGGTTGTTAGAGCTTTCGATAGTATGGCCACCGCCGATTTGACCAATGGAATGAGAGTAGGGGAAAGTGAGACATTCAACTCGGCTCAACAATCAGCTGAAATTAGATTGTTTCGGAGAATGGCATTTGGTAGTCAAAATTACAGTACAGATTTTTTTAGCGAAGGTAGCGGGAATGGTAACCCGGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

778

Amino Acids

81.09

Weight (kDa)

6.07

Isoelectric Point (pI)

86.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	449 - 651	6.2e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	451 - 720	9.2e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26150 AT1G26150 AT1G68690 AT1G68690 AT1G68690 AT1G68690
fragaria_vesca	FvH4_4g28470 FvH4_4g28470 FvH4_4g28470
malus_domestica	MD13G1050900.v1.1 MD16G1051300.v1.1
prunus_persica	Prupe.1G301200_v2.0.a1 Prupe.1G301200_v2.0.a1
pyrus_communis	pycom13g04500 pycom16g04510
rosa_chinensis	RchiOBHm_Chr4g0436441
rosa_laevigata	RLG00000006518
rosa_multiflora	Rmu_sc0000579.1_g000005
rosa_rugosa	Rorug04G0293900
rosa_samantha	Rh4AG348400 Rh4BG357100 Rh4CG371600 Rh4DG350800
rosa_wichuraiana	Rw4G030450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	376
Acc36I	ACCTGC	2 cut(s)	214, 376
AccB7I	CCANNNNNTGG	1 cut(s)	1960
AclWI	GGATC	3 cut(s)	233, 356, 2036
AcoI	YGGCCR	1 cut(s)	2172
AcsI	RAATTY	4 cut(s)	295, 942, 1264, 1463
AcuI	CTGAAG	3 cut(s)	21, 1206, 1494
AcvI	CACGTG	2 cut(s)	1637, 1820
AfaI	GTAC	5 cut(s)	204, 996, 1816, 1895, 2293
AfiI	CCNNNNNNNGG	6 cut(s)	1235, 1286, 1510, 1960, 2000, 2141
AflIII	ACRYGT	4 cut(s)	1634, 1636, 1817, 1819
AhdI	GACNNNNNGTC	1 cut(s)	1488
AjuI	GAANNNNNNNTTGG	2 cut(s)	1359, 1391
Alw26I	GTCTC	3 cut(s)	1475, 2125, 2210
AlwI	GGATC	3 cut(s)	233, 356, 2036
AlwNI	CAGNNNCTG	1 cut(s)	704
Ama87I	CYCGRG	1 cut(s)	1758
AoxI	GGCC	4 cut(s)	1027, 1613, 1845, 2172
ApeKI	GCWGC	7 cut(s)	851, 1283, 1552, 1649, 1658, 2099, 2102
ApoI	RAATTY	4 cut(s)	295, 942, 1264, 1463
Asp700I	GAANNNNTTC	1 cut(s)	1243
AspS9I	GGNCC	2 cut(s)	1027, 1846
AsuC2I	CCSGG	1 cut(s)	2330
AvaI	CYCGRG	1 cut(s)	1758
BalI	TGGCCA	1 cut(s)	2174
BanII	GRGCYC	1 cut(s)	1990
BauI	CACGAG	1 cut(s)	1662
BbrPI	CACGTG	2 cut(s)	1637, 1820
BbsI	GAAGAC	1 cut(s)	1692
BbvI	GCAGC	7 cut(s)	863, 1295, 1539, 1636, 1670, 2086, 2089
BcgI	CGANNNNNNTGC	1 cut(s)	28
BcnI	CCSGG	1 cut(s)	2330
BcoDI	GTCTC	3 cut(s)	1475, 2125, 2210
BfaI	CTAG	4 cut(s)	57, 63, 1322, 1976
BfmI	CTRYAG	2 cut(s)	849, 1272
BfuAI	ACCTGC	2 cut(s)	214, 376
BisI	GCNGC	9 cut(s)	464, 500, 852, 1284, 1553, 1650, 1659, 2100, 2103
BlpI	GCTNAGC	1 cut(s)	1082
BlsI	GCNGC	9 cut(s)	465, 501, 853, 1285, 1554, 1651, 1660, 2101, 2104
Bme1390I	CCNGG	1 cut(s)	2330
BmeRI	GACNNNNNGTC	1 cut(s)	1488
BmeT110I	CYCGRG	1 cut(s)	1758
BmgT120I	GGNCC	2 cut(s)	1027, 1846
BmiI	GGNNCC	2 cut(s)	1028, 1848
BmrFI	CCNGG	1 cut(s)	2330
BmrI	ACTGGG	2 cut(s)	825, 1636
BmsI	GCATC	7 cut(s)	176, 746, 782, 910, 1786, 1936, 1958
BmuI	ACTGGG	2 cut(s)	825, 1636
BpiI	GAAGAC	1 cut(s)	1692
BplI	GAGNNNNNCTC	2 cut(s)	391, 423
BpmI	CTGGAG	4 cut(s)	204, 681, 1059, 1937
Bpu10I	CCTNAGC	2 cut(s)	1031, 1326
Bpu1102I	GCTNAGC	1 cut(s)	1082
BpuEI	CTTGAG	1 cut(s)	2072
BpuMI	CCSGG	1 cut(s)	2330
BsaAI	YACGTR	2 cut(s)	1637, 1820
BsaI	GGTCTC	2 cut(s)	1475, 2125
BsaJI	CCNNGG	2 cut(s)	1301, 2045
Bsc4I	CCNNNNNNNGG	6 cut(s)	1235, 1286, 1510, 1960, 2000, 2141
Bse118I	RCCGGY	1 cut(s)	1279
Bse1I	ACTGG	7 cut(s)	221, 395, 831, 1042, 1616, 1631, 1933
Bse3DI	GCAATG	1 cut(s)	1089
BseDI	CCNNGG	2 cut(s)	1301, 2045
BseGI	GGATG	6 cut(s)	188, 269, 1693, 1801, 1949, 1951
BseLI	CCNNNNNNNGG	6 cut(s)	1235, 1286, 1510, 1960, 2000, 2141
BseMI	GCAATG	1 cut(s)	1089
BseMII	CTCAG	7 cut(s)	555, 669, 696, 1364, 1530, 1842, 1869
BseNI	ACTGG	7 cut(s)	221, 395, 831, 1042, 1616, 1631, 1933
BseRI	GAGGAG	7 cut(s)	144, 147, 564, 735, 753, 1129, 2036
BseXI	GCAGC	7 cut(s)	863, 1295, 1539, 1636, 1670, 2086, 2089
BsgI	GTGCAG	3 cut(s)	192, 1065, 1677
BshFI	GGCC	4 cut(s)	1029, 1615, 1847, 2174
BsiHKCI	CYCGRG	1 cut(s)	1758
BsiSI	CCGG	2 cut(s)	1280, 2330
BslFI	GGGAC	2 cut(s)	1556, 2157
BslI	CCNNNNNNNGG	6 cut(s)	1235, 1286, 1510, 1960, 2000, 2141
BsmAI	GTCTC	3 cut(s)	1475, 2125, 2210
BsmFI	GGGAC	2 cut(s)	1556, 2157
BsmI	GAATGC	1 cut(s)	1094
BsnI	GGCC	4 cut(s)	1029, 1615, 1847, 2174
Bso31I	GGTCTC	2 cut(s)	1475, 2125
BsoBI	CYCGRG	1 cut(s)	1758
Bsp1286I	GDGCHC	1 cut(s)	1990
Bsp143I	GATC	3 cut(s)	238, 361, 2041
Bsp1720I	GCTNAGC	1 cut(s)	1082
BspANI	GGCC	4 cut(s)	1029, 1615, 1847, 2174
BspCNI	CTCAG	7 cut(s)	556, 670, 697, 1363, 1531, 1843, 1870
BspHI	TCATGA	2 cut(s)	1260, 1681
BspLI	GGNNCC	2 cut(s)	1028, 1848
BspMAI	CTGCAG	2 cut(s)	853, 1276
BspMI	ACCTGC	2 cut(s)	214, 376
BspPI	GGATC	3 cut(s)	233, 356, 2036
BspTNI	GGTCTC	2 cut(s)	1475, 2125
BsrDI	GCAATG	1 cut(s)	1089
BsrFI	RCCGGY	1 cut(s)	1279
BsrI	ACTGG	7 cut(s)	221, 395, 831, 1042, 1616, 1631, 1933
BssAI	RCCGGY	1 cut(s)	1279
BssECI	CCNNGG	2 cut(s)	1301, 2045
BssMI	GATC	3 cut(s)	238, 361, 2041
BssSI	CACGAG	1 cut(s)	1662
BssT1I	CCWWGG	2 cut(s)	1301, 2045
Bst2BI	CACGAG	1 cut(s)	1662
Bst4CI	ACNGT	2 cut(s)	1959, 2291
BstAPI	GCANNNNNTGC	1 cut(s)	920
BstBAI	YACGTR	2 cut(s)	1637, 1820
BstC8I	GCNNGC	1 cut(s)	1288
BstEII	GGTNACC	1 cut(s)	2324
BstF5I	GGATG	6 cut(s)	188, 269, 1693, 1801, 1949, 1951
BstKTI	GATC	3 cut(s)	241, 364, 2044
BstMAI	GTCTC	3 cut(s)	1475, 2125, 2210
BstMBI	GATC	3 cut(s)	238, 361, 2041
BstMWI	GCNNNNNNNGC	7 cut(s)	920, 1280, 1655, 1658, 1698, 1946, 2313
BstPI	GGTNACC	1 cut(s)	2324
BstSCI	CCNGG	1 cut(s)	2328
BstSFI	CTRYAG	2 cut(s)	849, 1272
BstV1I	GCAGC	7 cut(s)	863, 1295, 1539, 1636, 1670, 2086, 2089
BstV2I	GAAGAC	1 cut(s)	1692
BstXI	CCANNNNNNTGG	1 cut(s)	1601
BsuRI	GGCC	4 cut(s)	1029, 1615, 1847, 2174
BtgZI	GCGATG	1 cut(s)	1149
BtsCI	GGATG	6 cut(s)	188, 269, 1693, 1801, 1949, 1951
BtsI	GCAGTG	3 cut(s)	114, 1053, 1258
BtsIMutI	CAGTG	6 cut(s)	114, 228, 402, 1035, 1053, 1258
BveI	ACCTGC	2 cut(s)	214, 376
Cac8I	GCNNGC	1 cut(s)	1288
CaiI	CAGNNNCTG	1 cut(s)	704
CciI	TCATGA	2 cut(s)	1260, 1681
Cfr10I	RCCGGY	1 cut(s)	1279
Cfr13I	GGNCC	2 cut(s)	1027, 1846
Csp6I	GTAC	5 cut(s)	203, 995, 1815, 1894, 2292
CviAII	CATG	5 cut(s)	1111, 1261, 1601, 1682, 1825
CviQI	GTAC	5 cut(s)	203, 995, 1815, 1894, 2292
DpnI	GATC	3 cut(s)	240, 363, 2043
DpnII	GATC	3 cut(s)	238, 361, 2041
DriI	GACNNNNNGTC	1 cut(s)	1488
EaeI	YGGCCR	1 cut(s)	2172
Eam1105I	GACNNNNNGTC	1 cut(s)	1488
Eco130I	CCWWGG	2 cut(s)	1301, 2045
Eco24I	GRGCYC	1 cut(s)	1990
Eco31I	GGTCTC	2 cut(s)	1475, 2125
Eco57I	CTGAAG	3 cut(s)	21, 1206, 1494
Eco72I	CACGTG	2 cut(s)	1637, 1820
Eco88I	CYCGRG	1 cut(s)	1758
Eco91I	GGTNACC	1 cut(s)	2324
EcoO109I	RGGNCCY	1 cut(s)	1027
EcoO65I	GGTNACC	1 cut(s)	2324
EcoRI	GAATTC	2 cut(s)	1264, 1463
EcoT14I	CCWWGG	2 cut(s)	1301, 2045
EcoT22I	ATGCAT	1 cut(s)	1951
EcoT38I	GRGCYC	1 cut(s)	1990
ErhI	CCWWGG	2 cut(s)	1301, 2045
FaeI	CATG	5 cut(s)	1114, 1264, 1604, 1685, 1828
FaqI	GGGAC	2 cut(s)	1556, 2157
FatI	CATG	5 cut(s)	1110, 1260, 1600, 1681, 1824
FauI	CCCGC	2 cut(s)	919, 2309
Fnu4HI	GCNGC	9 cut(s)	464, 500, 852, 1284, 1553, 1650, 1659, 2100, 2103
FokI	GGATG	6 cut(s)	175, 256, 1680, 1808, 1936, 1958
FriOI	GRGCYC	1 cut(s)	1990
Fsp4HI	GCNGC	9 cut(s)	464, 500, 852, 1284, 1553, 1650, 1659, 2100, 2103
FspBI	CTAG	4 cut(s)	57, 63, 1322, 1976
GluI	GCNGC	9 cut(s)	464, 500, 852, 1284, 1553, 1650, 1659, 2100, 2103
GsuI	CTGGAG	4 cut(s)	204, 681, 1059, 1937
HaeIII	GGCC	4 cut(s)	1029, 1615, 1847, 2174
HapII	CCGG	2 cut(s)	1280, 2330
Hin1II	CATG	5 cut(s)	1114, 1264, 1604, 1685, 1828
HpaII	CCGG	2 cut(s)	1280, 2330
HpyCH4III	ACNGT	2 cut(s)	1959, 2291
HpyCH4IV	ACGT	4 cut(s)	356, 644, 1636, 1819
HpyF10VI	GCNNNNNNNGC	7 cut(s)	920, 1280, 1655, 1658, 1698, 1946, 2313
HpySE526I	ACGT	4 cut(s)	356, 644, 1636, 1819
Hsp92II	CATG	5 cut(s)	1114, 1264, 1604, 1685, 1828
Kzo9I	GATC	3 cut(s)	238, 361, 2041
LmnI	GCTCC	4 cut(s)	157, 880, 928, 1231
Lsp1109I	GCAGC	7 cut(s)	863, 1295, 1539, 1636, 1670, 2086, 2089
LweI	GCATC	7 cut(s)	176, 746, 782, 910, 1786, 1936, 1958
MaeI	CTAG	4 cut(s)	57, 63, 1322, 1976
MaeII	ACGT	4 cut(s)	356, 644, 1636, 1819
MaeIII	GTNAC	2 cut(s)	645, 2324
MalI	GATC	3 cut(s)	240, 363, 2043
MboI	GATC	3 cut(s)	238, 361, 2041
MboII	GAAGA	9 cut(s)	258, 282, 1170, 1212, 1589, 1670, 1697, 1904, 2068
MfeI	CAATTG	1 cut(s)	1430
MhlI	GDGCHC	1 cut(s)	1990
MlsI	TGGCCA	1 cut(s)	2174
MluNI	TGGCCA	1 cut(s)	2174
MlyI	GAGTC	3 cut(s)	888, 1456, 1981
MmeI	TCCRAC	1 cut(s)	185
Mox20I	TGGCCA	1 cut(s)	2174
Mph1103I	ATGCAT	1 cut(s)	1951
MroXI	GAANNNNTTC	1 cut(s)	1243
MscI	TGGCCA	1 cut(s)	2174
MseI	TTAA	2 cut(s)	629, 1641
MslI	CAYNNNNRTG	1 cut(s)	1599
Msp20I	TGGCCA	1 cut(s)	2174
MspA1I	CMGCKG	2 cut(s)	41, 2243
MspI	CCGG	2 cut(s)	1280, 2330
MspR9I	CCNGG	1 cut(s)	2330
MunI	CAATTG	1 cut(s)	1430
Mva1269I	GAATGC	1 cut(s)	1094
MwoI	GCNNNNNNNGC	7 cut(s)	920, 1280, 1655, 1658, 1698, 1946, 2313
NciI	CCSGG	1 cut(s)	2330
NdeII	GATC	3 cut(s)	238, 361, 2041
NlaIII	CATG	5 cut(s)	1114, 1264, 1604, 1685, 1828
NlaIV	GGNNCC	2 cut(s)	1028, 1848
NmeAIII	GCCGAG	1 cut(s)	2207
NmuCI	GTSAC	1 cut(s)	645
NsiI	ATGCAT	1 cut(s)	1951
PagI	TCATGA	2 cut(s)	1260, 1681
PaqCI	CACCTGC	1 cut(s)	376
PcsI	WCGNNNNNNNCGW	1 cut(s)	20
PctI	GAATGC	1 cut(s)	1094
PdmI	GAANNNNTTC	1 cut(s)	1243
PfeI	GAWTC	8 cut(s)	95, 104, 226, 701, 1193, 1354, 1395, 1668
PflMI	CCANNNNNTGG	1 cut(s)	1960
PkrI	GCNGC	9 cut(s)	465, 501, 853, 1285, 1554, 1651, 1660, 2101, 2104
PleI	GAGTC	3 cut(s)	888, 1455, 1980
PmaCI	CACGTG	2 cut(s)	1637, 1820
PmlI	CACGTG	2 cut(s)	1637, 1820
PpsI	GAGTC	3 cut(s)	888, 1455, 1980
Ppu21I	YACGTR	2 cut(s)	1637, 1820
PspCI	CACGTG	2 cut(s)	1637, 1820
PspEI	GGTNACC	1 cut(s)	2324
PspN4I	GGNNCC	2 cut(s)	1028, 1848
PspPI	GGNCC	2 cut(s)	1027, 1846
PstI	CTGCAG	2 cut(s)	853, 1276
PstNI	CAGNNNCTG	1 cut(s)	704
PvuII	CAGCTG	2 cut(s)	41, 2243
RsaI	GTAC	5 cut(s)	204, 996, 1816, 1895, 2293
RsaNI	GTAC	5 cut(s)	203, 995, 1815, 1894, 2292
RseI	CAYNNNNRTG	1 cut(s)	1599
SaqAI	TTAA	2 cut(s)	629, 1641
SatI	GCNGC	9 cut(s)	464, 500, 852, 1284, 1553, 1650, 1659, 2100, 2103
Sau3AI	GATC	3 cut(s)	238, 361, 2041
Sau96I	GGNCC	2 cut(s)	1027, 1846
SchI	GAGTC	3 cut(s)	888, 1456, 1981
ScrFI	CCNGG	1 cut(s)	2330
SduI	GDGCHC	1 cut(s)	1990
SfaNI	GCATC	7 cut(s)	176, 746, 782, 910, 1786, 1936, 1958
SfcI	CTRYAG	2 cut(s)	849, 1272
SmiMI	CAYNNNNRTG	1 cut(s)	1599
SmlI	CTYRAG	1 cut(s)	2051
SmoI	CTYRAG	1 cut(s)	2051
SspI	AATATT	1 cut(s)	964
SspMI	CTAG	4 cut(s)	57, 63, 1322, 1976
StyD4I	CCNGG	1 cut(s)	2328
StyI	CCWWGG	2 cut(s)	1301, 2045
TaaI	ACNGT	2 cut(s)	1959, 2291
TaiI	ACGT	4 cut(s)	359, 647, 1639, 1822
TaqI	TCGA	2 cut(s)	1990, 2163
TatI	WGTACW	3 cut(s)	1814, 1893, 2291
TauI	GCSGC	2 cut(s)	466, 502
TfiI	GAWTC	8 cut(s)	95, 104, 226, 701, 1193, 1354, 1395, 1668
Tru1I	TTAA	2 cut(s)	629, 1641
Tru9I	TTAA	2 cut(s)	629, 1641
TscAI	CASTG	6 cut(s)	121, 228, 402, 1042, 1053, 1258
TseFI	GTSAC	1 cut(s)	645
TseI	GCWGC	7 cut(s)	851, 1283, 1552, 1649, 1658, 2099, 2102
Tsp45I	GTSAC	1 cut(s)	645
TspGWI	ACGGA	2 cut(s)	190, 1948
TspRI	CASTG	6 cut(s)	121, 228, 402, 1042, 1053, 1258
Van91I	CCANNNNNTGG	1 cut(s)	1960
XapI	RAATTY	4 cut(s)	295, 942, 1264, 1463
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1623, 1789
XmnI	GAANNNNTTC	1 cut(s)	1243
XspI	CTAG	4 cut(s)	57, 63, 1322, 1976
Zsp2I	ATGCAT	1 cut(s)	1951

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.