Rh4BG357100

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
51702199 .. 51705912
3714 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG357100.1

Sequence Viewer

Length: 2067 bp
ATGGCAACCACATCGCCATCTCCGAACTCATCTCCTTCAGCTGTGCCACCAGCTTCTAGTACTAGTTCCACACCACCACCACAGCCCAATGTGGAATCACCAGATTCCTCAAACACTACAACTCAATCTCCACAGCCTGATGTTCCATCAGCTCCTCCTCCAACTGCATCATCACCCCCTCCAATTCCATCCCCCCCTTCCGTACCTACACCATCACCTCCAATGAATCAACAATCTGATCCGCCAGCCTCACCGCCACCGCCTTCTTCATCCAATGTGCCTCCACCATCTTCAAATTCTCCACCCCCACCATCATCTGACCCACCAAAGAGTTCACCTTCCCCAACACCACCAACGTCTGATCCACCTGCAAGTTCACCTCCCCCACCGCAGCCAGTCAGCTCACCTCCCCCACCACAGCCAGTGAGTTCACCTCCACCACCAACTTCAAGTCCACCTAAGACTTCACCTCCACCTCCATCATCAACGCCGCCCAAAAGTTCACCTCCGCCACCATCAGAGCCACCTGAGAAATCTCCTCCACCTCCACCAGCAAATCCCCCTGAAACATCACCACCGCCTCCACCAACATCAAAGCCCCCTGAAACGTCACCACCAACATCAAAGCCACCTGAGAAATCACCACCACCTCCAGAATCTGAGCCACCCAAAAGTTCACCTCCACCACCAGCATCAACTCCTCCTAAAAGTTCACCTCCTCCACAGGCATCAGAGCCTCCAAGCAGTTCACCCCCACCTTCAAGCCCCAACCCTCCCCCTCCACCCGGTTCTCAACCAACCCCTGCAGCCCCACCTCCGAAGTCATCAGCTCCACCACCCACAATACGACTCTCACCACCCCCACCCTCAGATGATGCTCCACCACCAACTACTCAAATTCCAAGCCCGCCATCAAATATTCCAAGTTCAAACAATTCCAATCCTAATGTACCACCAAGTTCAAATGCCACAAGTAATAGGGGTCTTAGCACTGGAGGTGCAGTGGCAATTAGTGTAGTGGCTGGGATAATAGTGCTTAGCTTCATTGCATTCGCTGTATGGTGCATGAGGAGGAAGCAAAAGAAAAAGGTTTCTGGGTTTGGAGGTTATGTTATGCCATCGCCGATGGTATCTTCTCCCCAATCAGATTCATCATCATTCTTGAAGGCACATTCTTCAGCTCCCCTTATAGGAAGTGGTTCTGGCAGTGATTTCGTGAATTCTCCTGCAGAACCGGCAGGAGGCAATTCAAGACCTTGGTTTACTTATGACGAACTAGTTAAGGCTACAAATGACTTTTCATCTCAGAATCTTTTGGGGGAAGGTGGATTTGGCTCTGTATATAAGGGAATCCTGCCAGATGATAGAGAGGTGGCAGTAAAACAATTGAAAATAGGTGGGAGTCAGGGTGAGAGAGAATTCAAAGCTGAAGTTGAGACCATTAGTCGCGTTCACCACCGCCATTTGGTTTCTTTGGTGGGCTATTGCATTTCTGAGAACCAAAGGCTGCTTGTCTATGAATATGTCTCTAATGATACCCTCTATTTCCATCTTCATGGAGAAGGTAGGCCAGTTCTTGACTGGGCAACACGTGTTAAAGTTGCTGCTGGTGCAGCTCGTGGAATCGCCTATCTTCATGAAGACTGCCATCCTCGCATTATTCACAGGGATATAAAGTCATCAAACATTCTATTAGATAACAACTTTGAAGCTCGGGCTCGACCCTTATTGGGTTATGCTCTTGATAATGAGGAGTTTGAAGGTTTGGTTGATCCAAGGCTTGAGAAGAACTATGTTGAAAGTGAAGTATTCAGACTGATTGAGATTGCTGCTGCTTGTGTGCGACACTCATCTGCTAAGAGACCACGAATGGGACAGGTTGTTAGAGCTTTCGATAGTATGGCCACCTCCGATTTAACCAATGGAATGAGAGTAGGGGAAAGTGAGACATTCAACTCGGCTCAACAATCAGCTGAAATTAGATTGTTTCGGAGAATGGCATTTGGTAGTCAAAATTACAGTACAGATTTTTTTAGCGAAGGTAGCGGGAATGGTAACCTGGTATAG

Protein Analysis

688

Amino Acids

71.72

Weight (kDa)

6.12

Isoelectric Point (pI)

90.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 434 - 568 3.3e-23 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 436 - 569 1.3e-24 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 376
Acc36I ACCTGC 1 cut(s) 376
AccII CGCG 1 cut(s) 1449
AclWI GGATC 3 cut(s) 233, 356, 1766
AcoI YGGCCR 1 cut(s) 1902
AcsI RAATTY 4 cut(s) 295, 897, 1219, 1418
AcuI CTGAAG 3 cut(s) 21, 1161, 1449
AcvI CACGTG 1 cut(s) 1592
AfaI GTAC 4 cut(s) 61, 204, 951, 2023
AfiI CCNNNNNNNGG 6 cut(s) 785, 1190, 1241, 1465, 1730, 1871
AflIII ACRYGT 2 cut(s) 1589, 1591
AhdI GACNNNNNGTC 1 cut(s) 1443
AhlI ACTAGT 2 cut(s) 62, 1276
AjnI CCWGG 1 cut(s) 2058
AjuI GAANNNNNNNTTGG 2 cut(s) 1314, 1346
Alw26I GTCTC 4 cut(s) 1430, 1531, 1855, 1940
AlwI GGATC 3 cut(s) 233, 356, 1766
AlwNI CAGNNNCTG 1 cut(s) 659
Ama87I CYCGRG 1 cut(s) 1713
AoxI GGCC 2 cut(s) 1568, 1902
ApeKI GCWGC 7 cut(s) 391, 806, 1507, 1604, 1613, 1829, 1832
ApoI RAATTY 4 cut(s) 295, 897, 1219, 1418
Asp700I GAANNNNTTC 1 cut(s) 1198
AsuC2I CCSGG 1 cut(s) 786
AvaI CYCGRG 1 cut(s) 1713
BalI TGGCCA 1 cut(s) 1904
BanII GRGCYC 1 cut(s) 1720
BauI CACGAG 1 cut(s) 1617
BbrPI CACGTG 1 cut(s) 1592
BbsI GAAGAC 1 cut(s) 1647
BbvI GCAGC 7 cut(s) 403, 818, 1494, 1591, 1625, 1816, 1819
BcgI CGANNNNNNTGC 3 cut(s) 28, 1195, 1229
BciT130I CCWGG 1 cut(s) 2060
BcnI CCSGG 1 cut(s) 786
BcoDI GTCTC 4 cut(s) 1430, 1531, 1855, 1940
BcuI ACTAGT 2 cut(s) 62, 1276
BfaI CTAG 3 cut(s) 57, 63, 1277
BfmI CTRYAG 2 cut(s) 804, 1227
BfuAI ACCTGC 1 cut(s) 376
BisI GCNGC 8 cut(s) 392, 491, 807, 1508, 1605, 1614, 1830, 1833
BlpI GCTNAGC 1 cut(s) 1037
BlsI GCNGC 8 cut(s) 393, 492, 808, 1509, 1606, 1615, 1831, 1834
BmcAI AGTACT 1 cut(s) 61
Bme1390I CCNGG 2 cut(s) 786, 2060
BmeRI GACNNNNNGTC 1 cut(s) 1443
BmeT110I CYCGRG 1 cut(s) 1713
BmrFI CCNGG 2 cut(s) 786, 2060
BmrI ACTGGG 1 cut(s) 1591
BmsI GCATC 4 cut(s) 176, 701, 737, 865
BmuI ACTGGG 1 cut(s) 1591
BpiI GAAGAC 1 cut(s) 1647
BplI GAGNNNNNCTC 2 cut(s) 418, 450
BpmI CTGGAG 2 cut(s) 636, 1014
Bpu1102I GCTNAGC 1 cut(s) 1037
BpuEI CTTGAG 1 cut(s) 1802
BpuMI CCSGG 1 cut(s) 786
BsaAI YACGTR 1 cut(s) 1592
BsaI GGTCTC 2 cut(s) 1430, 1855
BsaJI CCNNGG 2 cut(s) 1256, 1775
Bsc4I CCNNNNNNNGG 6 cut(s) 785, 1190, 1241, 1465, 1730, 1871
Bse118I RCCGGY 1 cut(s) 1234
Bse1I ACTGG 5 cut(s) 395, 422, 997, 1571, 1586
Bse3DI GCAATG 1 cut(s) 1044
BseBI CCWGG 1 cut(s) 2060
BseDI CCNNGG 2 cut(s) 1256, 1775
BseGI GGATG 3 cut(s) 188, 269, 1648
BseLI CCNNNNNNNGG 6 cut(s) 785, 1190, 1241, 1465, 1730, 1871
BseMI GCAATG 1 cut(s) 1044
BseMII CTCAG 6 cut(s) 519, 624, 651, 882, 1319, 1485
BseNI ACTGG 5 cut(s) 395, 422, 997, 1571, 1586
BseRI GAGGAG 7 cut(s) 144, 147, 528, 690, 708, 1084, 1766
BseXI GCAGC 7 cut(s) 403, 818, 1494, 1591, 1625, 1816, 1819
BseYI CCCAGC 1 cut(s) 1022
BsgI GTGCAG 2 cut(s) 1020, 1632
Bsh1236I CGCG 1 cut(s) 1449
BshFI GGCC 2 cut(s) 1570, 1904
BsiHKCI CYCGRG 1 cut(s) 1713
BsiSI CCGG 2 cut(s) 786, 1235
BslFI GGGAC 1 cut(s) 1887
BslI CCNNNNNNNGG 6 cut(s) 785, 1190, 1241, 1465, 1730, 1871
BsmAI GTCTC 4 cut(s) 1430, 1531, 1855, 1940
BsmFI GGGAC 1 cut(s) 1887
BsmI GAATGC 1 cut(s) 1049
BsnI GGCC 2 cut(s) 1570, 1904
Bso31I GGTCTC 2 cut(s) 1430, 1855
BsoBI CYCGRG 1 cut(s) 1713
Bsp1286I GDGCHC 1 cut(s) 1720
Bsp143I GATC 3 cut(s) 238, 361, 1771
Bsp1720I GCTNAGC 1 cut(s) 1037
BspANI GGCC 2 cut(s) 1570, 1904
BspCNI CTCAG 6 cut(s) 520, 625, 652, 881, 1318, 1486
BspFNI CGCG 1 cut(s) 1449
BspHI TCATGA 1 cut(s) 1636
BspMAI CTGCAG 2 cut(s) 808, 1231
BspMI ACCTGC 1 cut(s) 376
BspPI GGATC 3 cut(s) 233, 356, 1766
BspTNI GGTCTC 2 cut(s) 1430, 1855
BsrDI GCAATG 1 cut(s) 1044
BsrFI RCCGGY 1 cut(s) 1234
BsrI ACTGG 5 cut(s) 395, 422, 997, 1571, 1586
BssAI RCCGGY 1 cut(s) 1234
BssECI CCNNGG 2 cut(s) 1256, 1775
BssMI GATC 3 cut(s) 238, 361, 1771
BssSI CACGAG 1 cut(s) 1617
BssT1I CCWWGG 2 cut(s) 1256, 1775
Bst2BI CACGAG 1 cut(s) 1617
Bst2UI CCWGG 1 cut(s) 2060
Bst4CI ACNGT 1 cut(s) 2021
BstBAI YACGTR 1 cut(s) 1592
BstC8I GCNNGC 2 cut(s) 246, 908
BstEII GGTNACC 1 cut(s) 2054
BstF5I GGATG 3 cut(s) 188, 269, 1648
BstFNI CGCG 1 cut(s) 1449
BstKTI GATC 3 cut(s) 241, 364, 1774
BstMAI GTCTC 4 cut(s) 1430, 1531, 1855, 1940
BstMBI GATC 3 cut(s) 238, 361, 1771
BstMWI GCNNNNNNNGC 5 cut(s) 1235, 1610, 1613, 1653, 2043
BstNI CCWGG 1 cut(s) 2060
BstPI GGTNACC 1 cut(s) 2054
BstSCI CCNGG 2 cut(s) 784, 2058
BstSFI CTRYAG 2 cut(s) 804, 1227
BstUI CGCG 1 cut(s) 1449
BstV1I GCAGC 7 cut(s) 403, 818, 1494, 1591, 1625, 1816, 1819
BstV2I GAAGAC 1 cut(s) 1647
BstXI CCANNNNNNTGG 1 cut(s) 1556
BsuRI GGCC 2 cut(s) 1570, 1904
BtgZI GCGATG 1 cut(s) 1104
BtsCI GGATG 3 cut(s) 188, 269, 1648
BtsI GCAGTG 2 cut(s) 1008, 1213
BtsIMutI CAGTG 4 cut(s) 429, 990, 1008, 1213
BveI ACCTGC 1 cut(s) 376
Cac8I GCNNGC 2 cut(s) 246, 908
CaiI CAGNNNCTG 1 cut(s) 659
CciI TCATGA 1 cut(s) 1636
Cfr10I RCCGGY 1 cut(s) 1234
CsiI ACCWGGT 1 cut(s) 2058
Csp6I GTAC 4 cut(s) 60, 203, 950, 2022
CviAII CATG 3 cut(s) 1066, 1556, 1637
CviQI GTAC 4 cut(s) 60, 203, 950, 2022
DpnI GATC 3 cut(s) 240, 363, 1773
DpnII GATC 3 cut(s) 238, 361, 1771
DriI GACNNNNNGTC 1 cut(s) 1443
EaeI YGGCCR 1 cut(s) 1902
Eam1105I GACNNNNNGTC 1 cut(s) 1443
EciI GGCGGA 2 cut(s) 231, 498
Eco130I CCWWGG 2 cut(s) 1256, 1775
Eco24I GRGCYC 1 cut(s) 1720
Eco31I GGTCTC 2 cut(s) 1430, 1855
Eco57I CTGAAG 3 cut(s) 21, 1161, 1449
Eco72I CACGTG 1 cut(s) 1592
Eco88I CYCGRG 1 cut(s) 1713
Eco91I GGTNACC 1 cut(s) 2054
EcoO65I GGTNACC 1 cut(s) 2054
EcoRI GAATTC 2 cut(s) 1219, 1418
EcoRII CCWGG 1 cut(s) 2058
EcoT14I CCWWGG 2 cut(s) 1256, 1775
EcoT38I GRGCYC 1 cut(s) 1720
ErhI CCWWGG 2 cut(s) 1256, 1775
FaeI CATG 3 cut(s) 1069, 1559, 1640
FaqI GGGAC 1 cut(s) 1887
FatI CATG 3 cut(s) 1065, 1555, 1636
FauI CCCGC 2 cut(s) 915, 2039
Fnu4HI GCNGC 8 cut(s) 392, 491, 807, 1508, 1605, 1614, 1830, 1833
FokI GGATG 3 cut(s) 175, 256, 1635
FriOI GRGCYC 1 cut(s) 1720
Fsp4HI GCNGC 8 cut(s) 392, 491, 807, 1508, 1605, 1614, 1830, 1833
FspBI CTAG 3 cut(s) 57, 63, 1277
GluI GCNGC 8 cut(s) 392, 491, 807, 1508, 1605, 1614, 1830, 1833
GsaI CCCAGC 1 cut(s) 1026
GsuI CTGGAG 2 cut(s) 636, 1014
HaeIII GGCC 2 cut(s) 1570, 1904
HapII CCGG 2 cut(s) 786, 1235
Hin1II CATG 3 cut(s) 1069, 1559, 1640
HpaII CCGG 2 cut(s) 786, 1235
Hpy188III TCNNGA 7 cut(s) 653, 1162, 1216, 1251, 1577, 1637, 1742
HpyCH4III ACNGT 1 cut(s) 2021
HpyCH4IV ACGT 3 cut(s) 356, 608, 1591
HpyCH4V TGCA 9 cut(s) 167, 371, 806, 1001, 1049, 1065, 1229, 1488, 1613
HpyF10VI GCNNNNNNNGC 5 cut(s) 1235, 1610, 1613, 1653, 2043
HpySE526I ACGT 3 cut(s) 356, 608, 1591
Hsp92II CATG 3 cut(s) 1069, 1559, 1640
Kzo9I GATC 3 cut(s) 238, 361, 1771
LmnI GCTCC 4 cut(s) 157, 835, 883, 1186
Lsp1109I GCAGC 7 cut(s) 403, 818, 1494, 1591, 1625, 1816, 1819
LweI GCATC 4 cut(s) 176, 701, 737, 865
MabI ACCWGGT 1 cut(s) 2058
MaeI CTAG 3 cut(s) 57, 63, 1277
MaeII ACGT 3 cut(s) 356, 608, 1591
MaeIII GTNAC 2 cut(s) 609, 2054
MalI GATC 3 cut(s) 240, 363, 1773
MboI GATC 3 cut(s) 238, 361, 1771
MboII GAAGA 8 cut(s) 258, 282, 1125, 1167, 1544, 1625, 1652, 1798
MfeI CAATTG 1 cut(s) 1385
MhlI GDGCHC 1 cut(s) 1720
MlsI TGGCCA 1 cut(s) 1904
MluNI TGGCCA 1 cut(s) 1904
MlyI GAGTC 2 cut(s) 843, 1411
MmeI TCCRAC 1 cut(s) 185
Mox20I TGGCCA 1 cut(s) 1904
MroXI GAANNNNTTC 1 cut(s) 1198
MscI TGGCCA 1 cut(s) 1904
MseI TTAA 3 cut(s) 1281, 1596, 1916
MslI CAYNNNNRTG 1 cut(s) 1554
Msp20I TGGCCA 1 cut(s) 1904
MspA1I CMGCKG 2 cut(s) 41, 1973
MspI CCGG 2 cut(s) 786, 1235
MspR9I CCNGG 2 cut(s) 786, 2060
MunI CAATTG 1 cut(s) 1385
Mva1269I GAATGC 1 cut(s) 1049
MvaI CCWGG 1 cut(s) 2060
MvnI CGCG 1 cut(s) 1449
MwoI GCNNNNNNNGC 5 cut(s) 1235, 1610, 1613, 1653, 2043
NciI CCSGG 1 cut(s) 786
NdeII GATC 3 cut(s) 238, 361, 1771
NlaIII CATG 3 cut(s) 1069, 1559, 1640
NmeAIII GCCGAG 1 cut(s) 1937
NmuCI GTSAC 1 cut(s) 609
PagI TCATGA 1 cut(s) 1636
PaqCI CACCTGC 1 cut(s) 376
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 1 cut(s) 1049
PdmI GAANNNNTTC 1 cut(s) 1198
PfeI GAWTC 8 cut(s) 95, 104, 226, 656, 1148, 1309, 1350, 1623
PkrI GCNGC 8 cut(s) 393, 492, 808, 1509, 1606, 1615, 1831, 1834
PleI GAGTC 2 cut(s) 843, 1410
PmaCI CACGTG 1 cut(s) 1592
PmlI CACGTG 1 cut(s) 1592
PpsI GAGTC 2 cut(s) 843, 1410
Ppu21I YACGTR 1 cut(s) 1592
Psp6I CCWGG 1 cut(s) 2058
PspCI CACGTG 1 cut(s) 1592
PspEI GGTNACC 1 cut(s) 2054
PspFI CCCAGC 1 cut(s) 1022
PspGI CCWGG 1 cut(s) 2058
PstI CTGCAG 2 cut(s) 808, 1231
PstNI CAGNNNCTG 1 cut(s) 659
PvuII CAGCTG 2 cut(s) 41, 1973
RsaI GTAC 4 cut(s) 61, 204, 951, 2023
RsaNI GTAC 4 cut(s) 60, 203, 950, 2022
RseI CAYNNNNRTG 1 cut(s) 1554
SaqAI TTAA 3 cut(s) 1281, 1596, 1916
SatI GCNGC 8 cut(s) 392, 491, 807, 1508, 1605, 1614, 1830, 1833
Sau3AI GATC 3 cut(s) 238, 361, 1771
ScaI AGTACT 1 cut(s) 61
SchI GAGTC 2 cut(s) 843, 1411
ScrFI CCNGG 2 cut(s) 786, 2060
SduI GDGCHC 1 cut(s) 1720
SexAI ACCWGGT 1 cut(s) 2058
SfaNI GCATC 4 cut(s) 176, 701, 737, 865
SfcI CTRYAG 2 cut(s) 804, 1227
SmiMI CAYNNNNRTG 1 cut(s) 1554
SmlI CTYRAG 1 cut(s) 1781
SmoI CTYRAG 1 cut(s) 1781
SpeI ACTAGT 2 cut(s) 62, 1276
SspI AATATT 1 cut(s) 919
SspMI CTAG 3 cut(s) 57, 63, 1277
StyD4I CCNGG 2 cut(s) 784, 2058
StyI CCWWGG 2 cut(s) 1256, 1775
TaaI ACNGT 1 cut(s) 2021
TaiI ACGT 3 cut(s) 359, 611, 1594
TaqI TCGA 2 cut(s) 1720, 1893
TatI WGTACW 2 cut(s) 59, 2021
TauI GCSGC 1 cut(s) 493
TfiI GAWTC 8 cut(s) 95, 104, 226, 656, 1148, 1309, 1350, 1623
Tru1I TTAA 3 cut(s) 1281, 1596, 1916
Tru9I TTAA 3 cut(s) 1281, 1596, 1916
TscAI CASTG 4 cut(s) 429, 997, 1008, 1213
TseFI GTSAC 1 cut(s) 609
TseI GCWGC 7 cut(s) 391, 806, 1507, 1604, 1613, 1829, 1832
Tsp45I GTSAC 1 cut(s) 609
TspDTI ATGAA 9 cut(s) 239, 258, 1033, 1140, 1290, 1533, 1544, 1625, 1653
TspGWI ACGGA 1 cut(s) 190
TspRI CASTG 4 cut(s) 429, 997, 1008, 1213
XapI RAATTY 4 cut(s) 295, 897, 1219, 1418
XcmI CCANNNNNNNNNTGG 1 cut(s) 1578
XmnI GAANNNNTTC 1 cut(s) 1198
XspI CTAG 3 cut(s) 57, 63, 1277
ZrmI AGTACT 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.