pycom13g05070

ACT domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
3408602 .. 3411020
2419 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g05070.5

Sequence Viewer

Length: 1344 bp
ATGCAAGTTAACATGAGCTTTTCACATGACATGGATGATGAGTACGAGAAACTCATCCGGAGAATGAACCCACCAAGGGTTGTAATCGATAACGAAGCCTGCAAGAATGCAACGGTGATAAGGGTGGATAGTGCAAACAAACATGGAATACTTCTGGAAGTTGTACAAGTACTTACTGATCTCGACCTTATCGTCACGAAAGCTTACATATCTTCGGATGGTGGCTGGTTCATGGATGTTTTTAATGTCACTGATCAAGATGGAAACAAGGTTGCAGATGAGGAGGTTTTGGAGTATATTCATAAGTCTCTTGGTCCGGAGGCACGCTTTGCATCTTCGATGAGATCTGTTGGTGTGAAACAATCAATGGACAGTACTGTAATTGAGCTCACTGGAAGCGACAGACCGGGATTACTCTCCGAAGTGAGCGCTGTCCTAACCAATCTCAAGTGCAATGTAGTGAGCGCGGAAGTCTGGACGCACAACACAAGGGCTGCATCTGTGATGCGCGTCACCGATGAGGAGACGGGATTGGCAATTACCGACTCTCAGAGGTTGGCTAGGATTAAGGAATTATTATGCAATGTGCTAAAGGGCAGCAACAAAACCAGAGGAGCAAGGACTGTTGTCTCTCACGCTGTTACGCACACTGATAGGAGGCTTCACCAAATGATGTTTGCAGATAGGGATTACGAACGAGTTGATGATGATGTCTTGGATGACAAGCAAAGACCGGATGTGAGTGTTGTTAATTTGCATGACAAAGACTACTCGGTGGTCACTATTCGGAGCAAAGACAGGCCAAAGCTTCTCTTCGACACGGTTTGCACTTTGACAGACATGCAATATGTGGTTTTTCATGCTAGTATTGATGCTGAGGGTCCGGAAGCTTATCAGGAATACTATATCAAACATGTAGATGGATCCCCTGTCAAATCAGATGCAGAGAGACAAAGAGTGATACAATGCCTCGAAGCGGCTATTGAGAGAAGAGTATCTGAGGACTTGAAGCTAGAACTCTGCACTACTGACAGAGTAGGGCTGCTATCTGATGTCACTCGGATCTTTCGAGAGAACAGCCTCACCGTAACAAGAGCAGAAGTTGCAACGAAAGCAGGCAAAGCCGTGAATACATTTTATGTTCGCGATGCATCAGGCTATCCGGTTGACTCCAAGACCATAGAGTCCATCCGGCAAGCAATCGGGCAGACTATACTCAAAGTAAAAGGCAACACTGAAGACGCAAAAACTGGTTCTGAGGAATCTCCAACAAGGTTCCTCTTTGGCGGTCTCTTCAAGTCCAGATCTTTCGTCAACTTCAAGCTGATCAGATCGTATCCTTGA

Protein Analysis

448

Amino Acids

50.16

Weight (kDa)

5.69

Isoelectric Point (pI)

34.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 191, 1183
AccII CGCG 3 cut(s) 467, 510, 1146
AccIII TCCGGA 3 cut(s) 57, 316, 883
AciI CCGC 3 cut(s) 467, 977, 1287
AclWI GGATC 3 cut(s) 918, 931, 1070
AcuI CTGAAG 1 cut(s) 1257
AfaI GTAC 4 cut(s) 44, 165, 171, 376
AfeI AGCGCT 1 cut(s) 430
AfiI CCNNNNNNNGG 2 cut(s) 76, 976
AflIII ACRYGT 1 cut(s) 913
AgsI TTSAA 3 cut(s) 1009, 1297, 1321
AluBI AGCT 7 cut(s) 18, 203, 388, 808, 890, 1012, 1324
AluI AGCT 7 cut(s) 18, 203, 388, 808, 890, 1012, 1324
Alw21I GWGCWC 1 cut(s) 390
Alw26I GTCTC 5 cut(s) 312, 518, 634, 943, 1295
AlwI GGATC 3 cut(s) 918, 931, 1070
Aor13HI TCCGGA 3 cut(s) 57, 316, 883
Aor51HI AGCGCT 1 cut(s) 430
AoxI GGCC 1 cut(s) 800
ApeKI GCWGC 3 cut(s) 494, 597, 1042
AspLEI GCGC 3 cut(s) 431, 467, 510
AspS9I GGNCC 2 cut(s) 314, 881
AsuC2I CCSGG 1 cut(s) 408
AsuHPI GGTGA 4 cut(s) 127, 505, 656, 1075
AvaII GGWCC 2 cut(s) 314, 881
BamHI GGATCC 1 cut(s) 923
BanII GRGCYC 1 cut(s) 390
BbsI GAAGAC 1 cut(s) 1245
Bbv12I GWGCWC 1 cut(s) 390
BbvCI CCTCAGC 1 cut(s) 876
BbvI GCAGC 3 cut(s) 481, 609, 1029
BccI CCATC 4 cut(s) 212, 254, 914, 1196
BceAI ACGGC 1 cut(s) 1109
BclI TGATCA 2 cut(s) 253, 1326
BcnI CCSGG 1 cut(s) 408
BcoDI GTCTC 5 cut(s) 312, 518, 634, 943, 1295
BfaI CTAG 3 cut(s) 561, 864, 1013
BfoI RGCGCY 1 cut(s) 432
BglII AGATCT 2 cut(s) 344, 1304
BisI GCNGC 4 cut(s) 495, 598, 978, 1043
BlsI GCNGC 4 cut(s) 496, 599, 979, 1044
BmcAI AGTACT 2 cut(s) 171, 376
Bme1390I CCNGG 1 cut(s) 408
Bme18I GGWCC 2 cut(s) 314, 881
BmgT120I GGNCC 2 cut(s) 314, 881
BmiI GGNNCC 3 cut(s) 882, 925, 1277
BmrFI CCNGG 1 cut(s) 408
BmsI GCATC 7 cut(s) 341, 495, 506, 862, 931, 1138, 1160
BoxI GACNNNNGTC 1 cut(s) 626
BpiI GAAGAC 1 cut(s) 1245
Bpu10I CCTNAGC 1 cut(s) 876
BpuEI CTTGAG 1 cut(s) 431
BpuMI CCSGG 1 cut(s) 408
Bsa29I ATCGAT 1 cut(s) 87
BsaI GGTCTC 1 cut(s) 1295
BsaJI CCNNGG 1 cut(s) 74
BsaWI WCCGGW 5 cut(s) 57, 316, 733, 883, 1162
Bsc4I CCNNNNNNNGG 2 cut(s) 76, 976
Bse1I ACTGG 2 cut(s) 397, 1255
Bse3DI GCAATG 2 cut(s) 460, 589
BseAI TCCGGA 3 cut(s) 57, 316, 883
BseCI ATCGAT 1 cut(s) 87
BseDI CCNNGG 1 cut(s) 74
BseGI GGATG 7 cut(s) 40, 54, 223, 241, 724, 742, 1188
BseLI CCNNNNNNNGG 2 cut(s) 76, 976
BseMI GCAATG 2 cut(s) 460, 589
BseMII CTCAG 4 cut(s) 563, 867, 990, 1248
BseNI ACTGG 2 cut(s) 397, 1255
BseRI GAGGAG 3 cut(s) 296, 536, 627
BseXI GCAGC 3 cut(s) 481, 609, 1029
BsgI GTGCAG 1 cut(s) 1006
Bsh1236I CGCG 3 cut(s) 467, 510, 1146
BshFI GGCC 1 cut(s) 802
BshVI ATCGAT 1 cut(s) 87
BsiHKAI GWGCWC 1 cut(s) 390
BsiSI CCGG 7 cut(s) 58, 317, 407, 734, 884, 1163, 1192
BslI CCNNNNNNNGG 2 cut(s) 76, 976
BsmAI GTCTC 5 cut(s) 312, 518, 634, 943, 1295
BsmBI CGTCTC 1 cut(s) 518
BsmI GAATGC 1 cut(s) 112
BsnI GGCC 1 cut(s) 802
Bso31I GGTCTC 1 cut(s) 1295
Bsp1286I GDGCHC 1 cut(s) 390
Bsp13I TCCGGA 3 cut(s) 57, 316, 883
Bsp1407I TGTACA 1 cut(s) 163
Bsp143I GATC 8 cut(s) 178, 253, 344, 923, 1062, 1304, 1326, 1331
Bsp68I TCGCGA 1 cut(s) 1146
BspACI CCGC 3 cut(s) 467, 977, 1287
BspANI GGCC 1 cut(s) 802
BspCNI CTCAG 4 cut(s) 562, 868, 991, 1249
BspDI ATCGAT 1 cut(s) 87
BspEI TCCGGA 3 cut(s) 57, 316, 883
BspFNI CGCG 3 cut(s) 467, 510, 1146
BspLI GGNNCC 3 cut(s) 882, 925, 1277
BspPI GGATC 3 cut(s) 918, 931, 1070
BspTNI GGTCTC 1 cut(s) 1295
BsrDI GCAATG 2 cut(s) 460, 589
BsrGI TGTACA 1 cut(s) 163
BsrI ACTGG 2 cut(s) 397, 1255
BssECI CCNNGG 1 cut(s) 74
BssMI GATC 8 cut(s) 178, 253, 344, 923, 1062, 1304, 1326, 1331
BssT1I CCWWGG 1 cut(s) 74
Bst4CI ACNGT 6 cut(s) 115, 374, 379, 625, 823, 1087
Bst6I CTCTTC 3 cut(s) 818, 985, 1298
BstAPI GCANNNNNTGC 2 cut(s) 329, 1103
BstAUI TGTACA 1 cut(s) 163
BstC8I GCNNGC 4 cut(s) 100, 325, 1117, 1197
BstDEI CTNAG 4 cut(s) 549, 876, 999, 1257
BstF5I GGATG 7 cut(s) 40, 54, 223, 241, 724, 742, 1188
BstFNI CGCG 3 cut(s) 467, 510, 1146
BstH2I RGCGCY 1 cut(s) 432
BstHHI GCGC 3 cut(s) 431, 467, 510
BstKTI GATC 8 cut(s) 181, 256, 347, 926, 1065, 1307, 1329, 1334
BstMAI GTCTC 5 cut(s) 312, 518, 634, 943, 1295
BstMBI GATC 8 cut(s) 178, 253, 344, 923, 1062, 1304, 1326, 1331
BstMWI GCNNNNNNNGC 4 cut(s) 329, 1103, 1112, 1121
BstNSI RCATGY 2 cut(s) 844, 917
BstPAI GACNNNNGTC 1 cut(s) 626
BstSCI CCNGG 1 cut(s) 406
BstUI CGCG 3 cut(s) 467, 510, 1146
BstV1I GCAGC 3 cut(s) 481, 609, 1029
BstV2I GAAGAC 1 cut(s) 1245
BstX2I RGATCY 4 cut(s) 344, 923, 1062, 1304
BstYI RGATCY 4 cut(s) 344, 923, 1062, 1304
Bsu15I ATCGAT 1 cut(s) 87
BsuRI GGCC 1 cut(s) 802
BsuTUI ATCGAT 1 cut(s) 87
BtgZI GCGATG 1 cut(s) 1161
BtsCI GGATG 7 cut(s) 40, 54, 223, 241, 724, 742, 1188
BtsIMutI CAGTG 4 cut(s) 249, 390, 648, 1233
BtuMI TCGCGA 1 cut(s) 1146
Cac8I GCNNGC 4 cut(s) 100, 325, 1117, 1197
CfoI GCGC 3 cut(s) 431, 467, 510
Cfr13I GGNCC 2 cut(s) 314, 881
ClaI ATCGAT 1 cut(s) 87
CseI GACGC 3 cut(s) 487, 499, 1250
Csp6I GTAC 4 cut(s) 43, 164, 170, 375
CviAII CATG 9 cut(s) 13, 26, 31, 143, 232, 758, 841, 860, 914
CviQI GTAC 4 cut(s) 43, 164, 170, 375
DdeI CTNAG 4 cut(s) 549, 876, 999, 1257
DpnI GATC 8 cut(s) 180, 255, 346, 925, 1064, 1306, 1328, 1333
DpnII GATC 8 cut(s) 178, 253, 344, 923, 1062, 1304, 1326, 1331
DrdI GACNNNNNNGTC 2 cut(s) 191, 1183
DseDI GACNNNNNNGTC 2 cut(s) 191, 1183
Eam1104I CTCTTC 3 cut(s) 818, 985, 1298
EarI CTCTTC 3 cut(s) 818, 985, 1298
Ecl136II GAGCTC 1 cut(s) 388
Eco130I CCWWGG 1 cut(s) 74
Eco24I GRGCYC 1 cut(s) 390
Eco31I GGTCTC 1 cut(s) 1295
Eco47I GGWCC 2 cut(s) 314, 881
Eco47III AGCGCT 1 cut(s) 430
Eco53kI GAGCTC 1 cut(s) 388
Eco57I CTGAAG 1 cut(s) 1257
EcoICRI GAGCTC 1 cut(s) 388
EcoT14I CCWWGG 1 cut(s) 74
EcoT22I ATGCAT 1 cut(s) 1153
EcoT38I GRGCYC 1 cut(s) 390
ErhI CCWWGG 1 cut(s) 74
Esp3I CGTCTC 1 cut(s) 518
FaeI CATG 9 cut(s) 16, 29, 34, 146, 235, 761, 844, 863, 917
FalI AAGNNNNNCTT 2 cut(s) 797, 829
FatI CATG 9 cut(s) 12, 25, 30, 142, 231, 757, 840, 859, 913
FbaI TGATCA 2 cut(s) 253, 1326
Fnu4HI GCNGC 4 cut(s) 495, 598, 978, 1043
FokI GGATG 7 cut(s) 41, 47, 230, 248, 731, 749, 1175
FriOI GRGCYC 1 cut(s) 390
Fsp4HI GCNGC 4 cut(s) 495, 598, 978, 1043
FspBI CTAG 3 cut(s) 561, 864, 1013
GlaI GCGC 3 cut(s) 430, 466, 509
GluI GCNGC 4 cut(s) 495, 598, 978, 1043
HaeII RGCGCY 1 cut(s) 432
HaeIII GGCC 1 cut(s) 802
HapII CCGG 7 cut(s) 58, 317, 407, 734, 884, 1163, 1192
HgaI GACGC 3 cut(s) 487, 499, 1250
HhaI GCGC 3 cut(s) 431, 467, 510
Hin1II CATG 9 cut(s) 16, 29, 34, 146, 235, 761, 844, 863, 917
Hin6I GCGC 3 cut(s) 429, 465, 508
HinP1I GCGC 3 cut(s) 429, 465, 508
HincII GTYRAC 3 cut(s) 10, 1168, 1315
HindII GTYRAC 3 cut(s) 10, 1168, 1315
HindIII AAGCTT 3 cut(s) 201, 806, 888
HinfI GANTC 4 cut(s) 545, 1169, 1184, 1262
HpaI GTTAAC 1 cut(s) 10
HpaII CCGG 7 cut(s) 58, 317, 407, 734, 884, 1163, 1192
HphI GGTGA 4 cut(s) 127, 505, 656, 1075
Hpy166II GTNNAC 3 cut(s) 10, 1168, 1315
Hpy8I GTNNAC 3 cut(s) 10, 1168, 1315
HpyCH4III ACNGT 6 cut(s) 115, 374, 379, 625, 823, 1087
HpyF10VI GCNNNNNNNGC 4 cut(s) 329, 1103, 1112, 1121
HpyF3I CTNAG 4 cut(s) 549, 876, 999, 1257
Hsp92II CATG 9 cut(s) 16, 29, 34, 146, 235, 761, 844, 863, 917
HspAI GCGC 3 cut(s) 429, 465, 508
Kpn2I TCCGGA 3 cut(s) 57, 316, 883
Ksp22I TGATCA 2 cut(s) 253, 1326
KspAI GTTAAC 1 cut(s) 10
Kzo9I GATC 8 cut(s) 178, 253, 344, 923, 1062, 1304, 1326, 1331
LmnI GCTCC 2 cut(s) 614, 789
Lsp1109I GCAGC 3 cut(s) 481, 609, 1029
LweI GCATC 7 cut(s) 341, 495, 506, 862, 931, 1138, 1160
MaeI CTAG 3 cut(s) 561, 864, 1013
MaeIII GTNAC 7 cut(s) 193, 247, 511, 640, 778, 1054, 1087
MalI GATC 8 cut(s) 180, 255, 346, 925, 1064, 1306, 1328, 1333
MboI GATC 8 cut(s) 178, 253, 344, 923, 1062, 1304, 1326, 1331
MboII GAAGA 6 cut(s) 204, 327, 805, 1002, 1250, 1285
MflI RGATCY 4 cut(s) 344, 923, 1062, 1304
MhlI GDGCHC 1 cut(s) 390
MluCI AATT 4 cut(s) 381, 537, 572, 751
MlyI GAGTC 3 cut(s) 539, 1163, 1193
MmeI TCCRAC 1 cut(s) 1292
Mph1103I ATGCAT 1 cut(s) 1153
MroI TCCGGA 3 cut(s) 57, 316, 883
MseI TTAA 4 cut(s) 9, 243, 567, 750
MslI CAYNNNNRTG 1 cut(s) 918
MspI CCGG 7 cut(s) 58, 317, 407, 734, 884, 1163, 1192
MspR9I CCNGG 1 cut(s) 408
Mva1269I GAATGC 1 cut(s) 112
MvnI CGCG 3 cut(s) 467, 510, 1146
MwoI GCNNNNNNNGC 4 cut(s) 329, 1103, 1112, 1121
NciI CCSGG 1 cut(s) 408
NdeII GATC 8 cut(s) 178, 253, 344, 923, 1062, 1304, 1326, 1331
NlaIII CATG 9 cut(s) 16, 29, 34, 146, 235, 761, 844, 863, 917
NlaIV GGNNCC 3 cut(s) 882, 925, 1277
NmuCI GTSAC 5 cut(s) 193, 247, 511, 778, 1054
NruI TCGCGA 1 cut(s) 1146
NsiI ATGCAT 1 cut(s) 1153
NspI RCATGY 2 cut(s) 844, 917
PciI ACATGT 1 cut(s) 913
PcsI WCGNNNNNNNCGW 2 cut(s) 189, 1066
PctI GAATGC 1 cut(s) 112
PfeI GAWTC 1 cut(s) 1262
PkrI GCNGC 4 cut(s) 496, 599, 979, 1044
PleI GAGTC 3 cut(s) 539, 1163, 1192
PpsI GAGTC 3 cut(s) 539, 1163, 1192
PscI ACATGT 1 cut(s) 913
PshAI GACNNNNGTC 1 cut(s) 626
Psp124BI GAGCTC 1 cut(s) 390
PspN4I GGNNCC 3 cut(s) 882, 925, 1277
PspPI GGNCC 2 cut(s) 314, 881
PsuI RGATCY 4 cut(s) 344, 923, 1062, 1304
RruI TCGCGA 1 cut(s) 1146
RsaI GTAC 4 cut(s) 44, 165, 171, 376
RsaNI GTAC 4 cut(s) 43, 164, 170, 375
RseI CAYNNNNRTG 1 cut(s) 918
SacI GAGCTC 1 cut(s) 390
SaqAI TTAA 4 cut(s) 9, 243, 567, 750
SatI GCNGC 4 cut(s) 495, 598, 978, 1043
Sau3AI GATC 8 cut(s) 178, 253, 344, 923, 1062, 1304, 1326, 1331
Sau96I GGNCC 2 cut(s) 314, 881
ScaI AGTACT 2 cut(s) 171, 376
SchI GAGTC 3 cut(s) 539, 1163, 1193
ScrFI CCNGG 1 cut(s) 408
SduI GDGCHC 1 cut(s) 390
SfaNI GCATC 7 cut(s) 341, 495, 506, 862, 931, 1138, 1160
SinI GGWCC 2 cut(s) 314, 881
SmiMI CAYNNNNRTG 1 cut(s) 918
SmlI CTYRAG 1 cut(s) 446
SmoI CTYRAG 1 cut(s) 446
Sse9I AATT 4 cut(s) 381, 537, 572, 751
SsiI CCGC 3 cut(s) 467, 977, 1287
SspMI CTAG 3 cut(s) 561, 864, 1013
SstI GAGCTC 1 cut(s) 390
StyD4I CCNGG 1 cut(s) 406
StyI CCWWGG 1 cut(s) 74
TaaI ACNGT 6 cut(s) 115, 374, 379, 625, 823, 1087
TaqI TCGA 6 cut(s) 87, 183, 338, 816, 972, 1069
TasI AATT 4 cut(s) 381, 537, 572, 751
TatI WGTACW 3 cut(s) 163, 169, 374
TauI GCSGC 1 cut(s) 980
TfiI GAWTC 1 cut(s) 1262
Tru1I TTAA 4 cut(s) 9, 243, 567, 750
Tru9I TTAA 4 cut(s) 9, 243, 567, 750
TscAI CASTG 4 cut(s) 256, 397, 655, 1240
TseFI GTSAC 5 cut(s) 193, 247, 511, 778, 1054
TseI GCWGC 3 cut(s) 494, 597, 1042
Tsp45I GTSAC 5 cut(s) 193, 247, 511, 778, 1054
TspDTI ATGAA 4 cut(s) 80, 220, 290, 848
TspRI CASTG 4 cut(s) 256, 397, 655, 1240
VpaK11BI GGWCC 2 cut(s) 314, 881
XceI RCATGY 2 cut(s) 844, 917
XspI CTAG 3 cut(s) 561, 864, 1013
ZrmI AGTACT 2 cut(s) 171, 376
Zsp2I ATGCAT 1 cut(s) 1153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.