pycom16g04920

ACT domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
3166595 .. 3169067
2473 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g04920.6

Sequence Viewer

Length: 1350 bp
ATGGAAGTTAACATGAGCTTTTCACACGACATGGATGACGATGACGAGTACGAGAAACTCATCCGGCGAATGAACCCACCAAGGGTTGTAATCGACAACGAAGCCTGCAAGAATGCGACGGTGATAAGGGTGGACAGTGCAAACAAATATGGAATCCTTTTGGAAGTTGTACAAGTACTTACTGATCTTAACCTTATCGTGACGAAAGCCTACATATCTTCGGATGGCGGCTGGTTCATGGATGTTTTTAATGTCACTGACCACGATGGAAACAAGGTTACAGATGAAGAAGTTTTGGATTATATTCAAAAGTCTCTTGGTCCAGAGGCATGCTTTGCATCTTCAATGAGATCTGTCGGTGTGAAACAATCAATGGATAGCACTGTAATTGAGCTAACTGGAAGTGACAGACCGGGATTACTCTCCGAAGTGAGTGCTGTCCTCACCAATCACAAATGCAATGTAGTGAGTGCCGAAGTCTGGACGCACAACACAAGGGCTGCATCGGTGATGCATGTTACTGATGAGGAGACGGGGTTGGCAATTAACGACCCTCAGAGGTTAGCTAGGATTAAGGAATTACTCTGCAATGTGCTAAAGGGCAGCAACAAAGCCAGAGGAGCTAGGACTGTTGTCTCTCACGCTGTTACGCACACTGACAGGAGGCTTCACCAAATGATGTTTGCAGATAGGGATTACGAACGAGTTGATGACGGTGTCTTGGATGACAAGCAAAGGCCGGATGTGAGCGTTGTTAATTGGCATGACAAATACTACTCGGTGGTCACTATTCGGAGCAAAGACAGGCCAAAGCTTCTCTTCGACACGGTTTGCACTTTGACAGACATGCAGTATGTGGTTTTTCATGCTAATATTGACGCTGAGGGTCCGGAAGCTTATCAGGAATACTATATCAGACATGTAGATGGATCTCCTGTGAAATCAGATGCAGAGAGACAAAGAGTGATACAATGCCTCGAGGCGGCTATTGAGAGAAGAGTATCTGAGGGCTTGAAGCTAGAACTCTGCACTACTGACAGAGTAGGGCTGTTGTCTGATGTCACTCGGATCTTTCGAGAGAACAGCCTCACTGTAACAAGAGCAGAAGTTGCAACGAAAGCAGGCAAAGCGGTGAATACATTCTATGTTCGCGATGCATCAGGCTATCCGGTTGACTCCAAGACCATAGAGTCCATCCGGCAAGTAATCGGGCAGACGATACTCAAAGTAAAAGGGAACCCTGAGGACACAAAACCTGGTTCTGAGGAATCTCCAACAAGGTTCCTCTTTGGTGGTCTCTTCAAGTCCAGATCGATCGTCAACTTCAAGCTGATCCGGTCGTATTCTTGA

Protein Analysis

450

Amino Acids

50.44

Weight (kDa)

5.66

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1189
AbsI CCTCGAGG 1 cut(s) 977
AccII CGCG 1 cut(s) 1152
AccIII TCCGGA 1 cut(s) 889
AciI CCGC 3 cut(s) 228, 983, 1130
AclWI GGATC 3 cut(s) 937, 1076, 1327
AfaI GTAC 3 cut(s) 50, 171, 177
AfiI CCNNNNNNNGG 3 cut(s) 82, 480, 982
AflIII ACRYGT 1 cut(s) 919
AgsI TTSAA 5 cut(s) 308, 345, 1015, 1303, 1327
AjnI CCWGG 1 cut(s) 1255
AluBI AGCT 8 cut(s) 18, 394, 566, 623, 814, 896, 1018, 1330
AluI AGCT 8 cut(s) 18, 394, 566, 623, 814, 896, 1018, 1330
Alw26I GTCTC 5 cut(s) 318, 524, 640, 949, 1301
AlwI GGATC 3 cut(s) 937, 1076, 1327
Ama87I CYCGRG 1 cut(s) 977
Aor13HI TCCGGA 1 cut(s) 889
AoxI GGCC 2 cut(s) 737, 806
ApeKI GCWGC 2 cut(s) 500, 603
Asp700I GAANNNNTTC 1 cut(s) 1139
AspS9I GGNCC 2 cut(s) 320, 887
AsuC2I CCSGG 1 cut(s) 414
AsuHPI GGTGA 5 cut(s) 133, 436, 520, 662, 1144
AvaI CYCGRG 1 cut(s) 977
AvaII GGWCC 2 cut(s) 320, 887
AxyI CCTNAGG 1 cut(s) 1242
BbvCI CCTCAGC 1 cut(s) 882
BbvI GCAGC 2 cut(s) 487, 615
BccI CCATC 4 cut(s) 218, 260, 920, 1202
BcgI CGANNNNNNTGC 2 cut(s) 416, 450
BciT130I CCWGG 1 cut(s) 1257
BcnI CCSGG 1 cut(s) 414
BcoDI GTCTC 5 cut(s) 318, 524, 640, 949, 1301
BfaI CTAG 3 cut(s) 567, 624, 1019
BglII AGATCT 1 cut(s) 350
BisI GCNGC 4 cut(s) 229, 501, 604, 984
BlsI GCNGC 4 cut(s) 230, 502, 605, 985
BmcAI AGTACT 1 cut(s) 177
Bme1390I CCNGG 2 cut(s) 414, 1257
Bme18I GGWCC 2 cut(s) 320, 887
BmeT110I CYCGRG 1 cut(s) 977
BmgT120I GGNCC 2 cut(s) 320, 887
BmiI GGNNCC 3 cut(s) 888, 1238, 1283
BmrFI CCNGG 2 cut(s) 414, 1257
BmsI GCATC 6 cut(s) 347, 501, 512, 937, 1144, 1166
BoxI GACNNNNGTC 1 cut(s) 632
Bpu10I CCTNAGC 1 cut(s) 882
BpuMI CCSGG 1 cut(s) 414
Bsa29I ATCGAT 1 cut(s) 1313
BsaI GGTCTC 1 cut(s) 1301
BsaJI CCNNGG 1 cut(s) 80
BsaWI WCCGGW 3 cut(s) 889, 1168, 1335
BsaXI ACNNNNNCTCC 2 cut(s) 521, 551
Bsc4I CCNNNNNNNGG 3 cut(s) 82, 480, 982
Bse1I ACTGG 1 cut(s) 403
Bse21I CCTNAGG 1 cut(s) 1242
Bse3DI GCAATG 2 cut(s) 466, 595
BseAI TCCGGA 1 cut(s) 889
BseBI CCWGG 1 cut(s) 1257
BseCI ATCGAT 1 cut(s) 1313
BseDI CCNNGG 1 cut(s) 80
BseGI GGATG 7 cut(s) 40, 60, 229, 247, 730, 748, 1194
BseLI CCNNNNNNNGG 3 cut(s) 82, 480, 982
BseMI GCAATG 2 cut(s) 466, 595
BseMII CTCAG 5 cut(s) 569, 873, 996, 1233, 1254
BseNI ACTGG 1 cut(s) 403
BseRI GAGGAG 2 cut(s) 542, 633
BseXI GCAGC 2 cut(s) 487, 615
BsgI GTGCAG 1 cut(s) 1012
Bsh1236I CGCG 1 cut(s) 1152
Bsh1285I CGRYCG 2 cut(s) 1317, 1340
BshFI GGCC 2 cut(s) 739, 808
BshVI ATCGAT 1 cut(s) 1313
BsiEI CGRYCG 2 cut(s) 1317, 1340
BsiHKCI CYCGRG 1 cut(s) 977
BsiSI CCGG 7 cut(s) 64, 413, 740, 890, 1169, 1198, 1336
BslI CCNNNNNNNGG 3 cut(s) 82, 480, 982
BsmAI GTCTC 5 cut(s) 318, 524, 640, 949, 1301
BsmBI CGTCTC 1 cut(s) 524
BsmI GAATGC 1 cut(s) 118
BsnI GGCC 2 cut(s) 739, 808
Bso31I GGTCTC 1 cut(s) 1301
BsoBI CYCGRG 1 cut(s) 977
Bsp13I TCCGGA 1 cut(s) 889
Bsp1407I TGTACA 1 cut(s) 169
Bsp143I GATC 7 cut(s) 184, 350, 929, 1068, 1310, 1314, 1332
Bsp68I TCGCGA 1 cut(s) 1152
BspACI CCGC 3 cut(s) 228, 983, 1130
BspANI GGCC 2 cut(s) 739, 808
BspCNI CTCAG 5 cut(s) 568, 874, 997, 1234, 1255
BspDI ATCGAT 1 cut(s) 1313
BspEI TCCGGA 1 cut(s) 889
BspFNI CGCG 1 cut(s) 1152
BspLI GGNNCC 3 cut(s) 888, 1238, 1283
BspPI GGATC 3 cut(s) 937, 1076, 1327
BspTNI GGTCTC 1 cut(s) 1301
BsrDI GCAATG 2 cut(s) 466, 595
BsrGI TGTACA 1 cut(s) 169
BsrI ACTGG 1 cut(s) 403
BssECI CCNNGG 1 cut(s) 80
BssMI GATC 7 cut(s) 184, 350, 929, 1068, 1310, 1314, 1332
BssT1I CCWWGG 1 cut(s) 80
Bst2UI CCWGG 1 cut(s) 1257
Bst4CI ACNGT 7 cut(s) 121, 137, 385, 631, 716, 829, 1093
Bst6I CTCTTC 3 cut(s) 824, 991, 1304
BstAPI GCANNNNNTGC 2 cut(s) 335, 1109
BstAUI TGTACA 1 cut(s) 169
BstC8I GCNNGC 3 cut(s) 106, 331, 1123
BstDEI CTNAG 5 cut(s) 555, 882, 1005, 1242, 1263
BstF5I GGATG 7 cut(s) 40, 60, 229, 247, 730, 748, 1194
BstFNI CGCG 1 cut(s) 1152
BstKTI GATC 7 cut(s) 187, 353, 932, 1071, 1313, 1317, 1335
BstMAI GTCTC 5 cut(s) 318, 524, 640, 949, 1301
BstMBI GATC 7 cut(s) 184, 350, 929, 1068, 1310, 1314, 1332
BstMCI CGRYCG 2 cut(s) 1317, 1340
BstMWI GCNNNNNNNGC 5 cut(s) 335, 620, 1109, 1118, 1127
BstNI CCWGG 1 cut(s) 1257
BstNSI RCATGY 4 cut(s) 333, 518, 850, 923
BstPAI GACNNNNGTC 1 cut(s) 632
BstSCI CCNGG 2 cut(s) 412, 1255
BstUI CGCG 1 cut(s) 1152
BstV1I GCAGC 2 cut(s) 487, 615
BstX2I RGATCY 3 cut(s) 350, 929, 1068
BstYI RGATCY 3 cut(s) 350, 929, 1068
Bsu15I ATCGAT 1 cut(s) 1313
Bsu36I CCTNAGG 1 cut(s) 1242
BsuRI GGCC 2 cut(s) 739, 808
BsuTUI ATCGAT 1 cut(s) 1313
BtgZI GCGATG 1 cut(s) 1167
BtsCI GGATG 7 cut(s) 40, 60, 229, 247, 730, 748, 1194
BtsIMutI CAGTG 5 cut(s) 142, 255, 381, 654, 1089
BtuMI TCGCGA 1 cut(s) 1152
Cac8I GCNNGC 3 cut(s) 106, 331, 1123
Cfr13I GGNCC 2 cut(s) 320, 887
ClaI ATCGAT 1 cut(s) 1313
CseI GACGC 2 cut(s) 493, 887
CsiI ACCWGGT 1 cut(s) 1255
Csp6I GTAC 3 cut(s) 49, 170, 176
CviAII CATG 9 cut(s) 13, 31, 238, 330, 515, 764, 847, 866, 920
CviQI GTAC 3 cut(s) 49, 170, 176
DdeI CTNAG 5 cut(s) 555, 882, 1005, 1242, 1263
DpnI GATC 7 cut(s) 186, 352, 931, 1070, 1312, 1316, 1334
DpnII GATC 7 cut(s) 184, 350, 929, 1068, 1310, 1314, 1332
DrdI GACNNNNNNGTC 1 cut(s) 1189
DseDI GACNNNNNNGTC 1 cut(s) 1189
Eam1104I CTCTTC 3 cut(s) 824, 991, 1304
EarI CTCTTC 3 cut(s) 824, 991, 1304
Eco130I CCWWGG 1 cut(s) 80
Eco31I GGTCTC 1 cut(s) 1301
Eco47I GGWCC 2 cut(s) 320, 887
Eco81I CCTNAGG 1 cut(s) 1242
Eco88I CYCGRG 1 cut(s) 977
EcoRII CCWGG 1 cut(s) 1255
EcoT14I CCWWGG 1 cut(s) 80
EcoT22I ATGCAT 2 cut(s) 516, 1159
ErhI CCWWGG 1 cut(s) 80
Esp3I CGTCTC 1 cut(s) 524
FaeI CATG 9 cut(s) 16, 34, 241, 333, 518, 767, 850, 869, 923
FalI AAGNNNNNCTT 2 cut(s) 803, 835
FatI CATG 9 cut(s) 12, 30, 237, 329, 514, 763, 846, 865, 919
Fnu4HI GCNGC 4 cut(s) 229, 501, 604, 984
FokI GGATG 7 cut(s) 47, 47, 236, 254, 737, 755, 1181
Fsp4HI GCNGC 4 cut(s) 229, 501, 604, 984
FspBI CTAG 3 cut(s) 567, 624, 1019
GluI GCNGC 4 cut(s) 229, 501, 604, 984
HaeIII GGCC 2 cut(s) 739, 808
HapII CCGG 7 cut(s) 64, 413, 740, 890, 1169, 1198, 1336
HgaI GACGC 2 cut(s) 493, 887
Hin1II CATG 9 cut(s) 16, 34, 241, 333, 518, 767, 850, 869, 923
HincII GTYRAC 3 cut(s) 10, 1174, 1321
HindII GTYRAC 3 cut(s) 10, 1174, 1321
HindIII AAGCTT 2 cut(s) 812, 894
HinfI GANTC 4 cut(s) 153, 1175, 1190, 1268
HpaI GTTAAC 1 cut(s) 10
HpaII CCGG 7 cut(s) 64, 413, 740, 890, 1169, 1198, 1336
HphI GGTGA 5 cut(s) 133, 436, 520, 662, 1144
Hpy166II GTNNAC 4 cut(s) 10, 133, 1174, 1321
Hpy188III TCNNGA 9 cut(s) 199, 323, 481, 890, 902, 1076, 1151, 1308, 1347
Hpy8I GTNNAC 4 cut(s) 10, 133, 1174, 1321
Hpy99I CGWCG 1 cut(s) 121
HpyCH4III ACNGT 7 cut(s) 121, 137, 385, 631, 716, 829, 1093
HpyF10VI GCNNNNNNNGC 5 cut(s) 335, 620, 1109, 1118, 1127
HpyF3I CTNAG 5 cut(s) 555, 882, 1005, 1242, 1263
Hsp92II CATG 9 cut(s) 16, 34, 241, 333, 518, 767, 850, 869, 923
Kpn2I TCCGGA 1 cut(s) 889
KspAI GTTAAC 1 cut(s) 10
Kzo9I GATC 7 cut(s) 184, 350, 929, 1068, 1310, 1314, 1332
LmnI GCTCC 2 cut(s) 620, 795
Lsp1109I GCAGC 2 cut(s) 487, 615
LweI GCATC 6 cut(s) 347, 501, 512, 937, 1144, 1166
MabI ACCWGGT 1 cut(s) 1255
MaeI CTAG 3 cut(s) 567, 624, 1019
MaeIII GTNAC 9 cut(s) 199, 253, 277, 404, 517, 646, 784, 1060, 1093
MalI GATC 7 cut(s) 186, 352, 931, 1070, 1312, 1316, 1334
MboI GATC 7 cut(s) 184, 350, 929, 1068, 1310, 1314, 1332
MboII GAAGA 6 cut(s) 210, 299, 333, 811, 1008, 1291
MflI RGATCY 3 cut(s) 350, 929, 1068
MluCI AATT 4 cut(s) 387, 543, 578, 757
MlyI GAGTC 2 cut(s) 1169, 1199
MmeI TCCRAC 1 cut(s) 1298
Mph1103I ATGCAT 2 cut(s) 516, 1159
MroI TCCGGA 1 cut(s) 889
MroXI GAANNNNTTC 1 cut(s) 1139
MseI TTAA 6 cut(s) 9, 189, 249, 546, 573, 756
MslI CAYNNNNRTG 1 cut(s) 924
MspI CCGG 7 cut(s) 64, 413, 740, 890, 1169, 1198, 1336
MspR9I CCNGG 2 cut(s) 414, 1257
Mva1269I GAATGC 1 cut(s) 118
MvaI CCWGG 1 cut(s) 1257
MvnI CGCG 1 cut(s) 1152
MwoI GCNNNNNNNGC 5 cut(s) 335, 620, 1109, 1118, 1127
NciI CCSGG 1 cut(s) 414
NdeII GATC 7 cut(s) 184, 350, 929, 1068, 1310, 1314, 1332
NlaIII CATG 9 cut(s) 16, 34, 241, 333, 518, 767, 850, 869, 923
NlaIV GGNNCC 3 cut(s) 888, 1238, 1283
NmuCI GTSAC 5 cut(s) 199, 253, 404, 784, 1060
NruI TCGCGA 1 cut(s) 1152
NsiI ATGCAT 2 cut(s) 516, 1159
NspI RCATGY 4 cut(s) 333, 518, 850, 923
PaeI GCATGC 1 cut(s) 333
PaeR7I CTCGAG 1 cut(s) 977
PciI ACATGT 1 cut(s) 919
PcsI WCGNNNNNNNCGW 1 cut(s) 1072
PctI GAATGC 1 cut(s) 118
PdmI GAANNNNTTC 1 cut(s) 1139
PfeI GAWTC 2 cut(s) 153, 1268
PflFI GACNNNGTC 1 cut(s) 716
PkrI GCNGC 4 cut(s) 230, 502, 605, 985
Ple19I CGATCG 1 cut(s) 1317
PleI GAGTC 2 cut(s) 1169, 1198
PpsI GAGTC 2 cut(s) 1169, 1198
PscI ACATGT 1 cut(s) 919
PshAI GACNNNNGTC 1 cut(s) 632
Psp6I CCWGG 1 cut(s) 1255
PspGI CCWGG 1 cut(s) 1255
PspN4I GGNNCC 3 cut(s) 888, 1238, 1283
PspPI GGNCC 2 cut(s) 320, 887
PspXI VCTCGAGB 1 cut(s) 977
PsuI RGATCY 3 cut(s) 350, 929, 1068
PsyI GACNNNGTC 1 cut(s) 716
PvuI CGATCG 1 cut(s) 1317
RruI TCGCGA 1 cut(s) 1152
RsaI GTAC 3 cut(s) 50, 171, 177
RsaNI GTAC 3 cut(s) 49, 170, 176
RseI CAYNNNNRTG 1 cut(s) 924
SaqAI TTAA 6 cut(s) 9, 189, 249, 546, 573, 756
SatI GCNGC 4 cut(s) 229, 501, 604, 984
Sau3AI GATC 7 cut(s) 184, 350, 929, 1068, 1310, 1314, 1332
Sau96I GGNCC 2 cut(s) 320, 887
ScaI AGTACT 1 cut(s) 177
SchI GAGTC 2 cut(s) 1169, 1199
ScrFI CCNGG 2 cut(s) 414, 1257
SexAI ACCWGGT 1 cut(s) 1255
SfaNI GCATC 6 cut(s) 347, 501, 512, 937, 1144, 1166
Sfr274I CTCGAG 1 cut(s) 977
SinI GGWCC 2 cut(s) 320, 887
SlaI CTCGAG 1 cut(s) 977
SmiMI CAYNNNNRTG 1 cut(s) 924
SmlI CTYRAG 1 cut(s) 977
SmoI CTYRAG 1 cut(s) 977
SphI GCATGC 1 cut(s) 333
Sse9I AATT 4 cut(s) 387, 543, 578, 757
SsiI CCGC 3 cut(s) 228, 983, 1130
SspI AATATT 1 cut(s) 874
SspMI CTAG 3 cut(s) 567, 624, 1019
StyD4I CCNGG 2 cut(s) 412, 1255
StyI CCWWGG 1 cut(s) 80
TaaI ACNGT 7 cut(s) 121, 137, 385, 631, 716, 829, 1093
TaqI TCGA 5 cut(s) 93, 822, 978, 1075, 1313
TasI AATT 4 cut(s) 387, 543, 578, 757
TatI WGTACW 2 cut(s) 169, 175
TauI GCSGC 2 cut(s) 231, 986
TfiI GAWTC 2 cut(s) 153, 1268
Tru1I TTAA 6 cut(s) 9, 189, 249, 546, 573, 756
Tru9I TTAA 6 cut(s) 9, 189, 249, 546, 573, 756
TscAI CASTG 5 cut(s) 142, 262, 388, 661, 1096
TseFI GTSAC 5 cut(s) 199, 253, 404, 784, 1060
TseI GCWGC 2 cut(s) 500, 603
Tsp45I GTSAC 5 cut(s) 199, 253, 404, 784, 1060
TspDTI ATGAA 4 cut(s) 86, 226, 300, 854
TspRI CASTG 5 cut(s) 142, 262, 388, 661, 1096
Tth111I GACNNNGTC 1 cut(s) 716
VpaK11BI GGWCC 2 cut(s) 320, 887
XceI RCATGY 4 cut(s) 333, 518, 850, 923
XhoI CTCGAG 1 cut(s) 977
XmnI GAANNNNTTC 1 cut(s) 1139
XspI CTAG 3 cut(s) 567, 624, 1019
ZrmI AGTACT 1 cut(s) 177
Zsp2I ATGCAT 2 cut(s) 516, 1159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.