Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0016684

Physical Location & Seq

Genomic Coordinates Reverse (-)

4166328 .. 4168109

Gene Structure 1782 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGGCAGCGCCGGCTGTCCAAATAAGCCCGTTCTCTCACCCAAAAACCAACAGAGACACCCCTCTCTCTCTCGTCCCCAAGTGCTCGACTTTGAGAGAAATCAAGCAAATCCATGCCTTTTCCATCAAAACCCATCTCCAACATGACATCTCCGTCCTCACCAAGCTCATCAATTTCTGCACCTCGAACCCTACGAGTACCTCCATGGACTACGCTCACCACCTGTTCGACCAAATTCCCCACCCGGACATCGTCGTCTTCAACACCATGGCTCGCGGCTACGCGCGCTCTGACACCCCGTTTCGAGCCATTTCACTCTTCTCCCACGTTCTGTGCGCAGGTCTCTTCCCAGATGACTACACATTCCCGTCGCTTCTCAAGGCGTGCGCCGGCTCTAAAGCGTTAGAAGAAGGGAAGCAATTGCATTGCTTTGCTATCAAGTTTGGCCTCCACCTTAACATCTATGTGTGTCCTACACTTATAAATATGTACACCGAGTGCAATGATTTGGATGCCGCTCGGCGGGTGTTTGATAAGATAACGGACCCTTGTGTTGTTATACACAATGCCATGATCACGGGCTATGCTCGAACTAGCCGGCCAAATGAGGCGTTGGCGTTGTTTCGAGAAATGCAGGCAAGCAATGTTAAGCCTACTGATGTAACCATGCTTTGTGCTCTTTCTTCATGTGCTTTGTTAGGAGCATTAGACTTGGGAAAGTGGATACATGAATATGTTAAGAAAAACAGGTTTGATAATTACGTTAAAGTGAACACTGCACTGATAGACATGTATGCAAAATGTGGAAGCTTGGAGGATGCAGTGTCTGTATTCGAAAACATGAGTGTCAAAGATACTCAGGCTTGGTCTGCAATGATCGTGGCATATGCGACACATGGGCATTGTTCCAAAGCCATATCTATGTTCGAAGAAATGAAAAGAGCACGAATTAGACCTGACGATATCACCTTTTTGGGTCTCTTGTACGCGTGTAGTCATGCTGGATTTGTTGAGGAGGGTTGCAATTATTTCTACAGCATGAGTGAGAAATATGGGATTTCTCCCGGTGTTAAGCATTATGGTTGCATGATAGATTTGCTAGGTCGGTCTGGACGCTTAGAGGAGGCCTACAACTTCATAGATGAGTTACCAATTAAGCCGACTCCCATATTCTGGCGAACGTTGTTATCAGCTTGTGGCAGCCACGGTGATGTAGACATGGGGATGCGGGTGCTTAAACGGATTTTTGAGTTAGATGACTCTCATGGTGGGGATTATGTGATCATATCGAACTTGTGTGCAAGAGCAGGGAGATGGGAGGATGTGGATTACTTAAGGAAGTTGATGAGAGGCAGAGGAGTTGTAAAGATTCCGGGATGCAGCTCCATTGAGGTGAACAATGTAGTGCACGAATTCTTTTCTGGAGACGGGGAGCGTTCTGTTTCTACTGTAGTGCACCAGGCAGTTGACGAATTGGTTGAAGAATTAAAGCTGGCTGGATATGTTCCTGATACTTCTCTAGTGTTTCATTCTAACATGGAAGATAGAGAGAGAGAAGTTTCTCTCAGATACCATAGTGAGAAGTTGGCGATTGCTTACGGGCTCTTAAACACAGCCCCCGGGGCAACAATCCGCGTCGTGAAGAACCTTAGGGTATGTGGGGATTGCCACTCTGCTGCTAAGTATATATCGTTGATCTTTAACAGACATATAATTCTTCGAGATGTCCAACGGTTCCATCATTTCAAAGACGGAAAGTGCTCTTGTGGAGATTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

594

Amino Acids

66.52

Weight (kDa)

6.94

Isoelectric Point (pI)

36.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	82 - 130	1.4e-06	PPR repeat family
PPR_2	PF13041	183 - 230	6e-10	PPR repeat family
PPR	PF01535	186 - 215	3.5e-06	PPR repeat
PPR_2	PF13041	285 - 332	3.4e-09	PPR repeat family
PPR	PF01535	288 - 316	7e-06	PPR repeat
E_motif	PF20431	402 - 464	1.7e-15	E motif
DYW_deaminase	PF14432	500 - 593	1.6e-40	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02980 AT5G66520
fragaria_vesca	FvH4_4g31300
malus_domestica	MD13G1071700.v1.1
prunus_persica	Prupe.1G275200_v2.0.a1
pyrus_communis	pycom13g06430
rosa_chinensis	RchiOBHm_Chr4g0439791
rosa_laevigata	RLG00000006238
rosa_multiflora	Rmu_sc0010226.1_g000006 Rmu_ssc0000029.1_g000006
rosa_roxburghii	Rroxscaffold_5G00380690
rosa_rugosa	Rorug04G0321400
rosa_samantha	Rh4BG384700
rosa_wichuraiana	Rw4G031820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	482
AasI	GACNNNNNNGTC	2 cut(s)	152, 254
Acc16I	TGCGCA	1 cut(s)	337
Acc36I	ACCTGC	1 cut(s)	329
AccB7I	CCANNNNNTGG	1 cut(s)	1173
AccBSI	CCGCTC	1 cut(s)	518
AccI	GTMKAC	1 cut(s)	1215
AccII	CGCG	5 cut(s)	276, 284, 286, 989, 1635
AciI	CCGC	5 cut(s)	276, 516, 523, 1228, 1633
AclI	AACGTT	1 cut(s)	1181
AcoI	YGGCCR	1 cut(s)	599
AcsI	RAATTY	2 cut(s)	234, 1412
AdeI	CACNNNGTG	1 cut(s)	498
AfaI	GTAC	3 cut(s)	199, 491, 986
AfiI	CCNNNNNNNGG	2 cut(s)	522, 1173
AflII	CTTAAG	1 cut(s)	1333
AflIII	ACRYGT	2 cut(s)	789, 987
AgsI	TTSAA	3 cut(s)	262, 1481, 1747
AjnI	CCWGG	1 cut(s)	1458
AluBI	AGCT	5 cut(s)	166, 810, 1193, 1383, 1492
AluI	AGCT	5 cut(s)	166, 810, 1193, 1383, 1492
Alw21I	GWGCWC	6 cut(s)	86, 679, 946, 1410, 1458, 1763
Alw26I	GTCTC	4 cut(s)	48, 347, 983, 1419
Alw44I	GTGCAC	2 cut(s)	1406, 1454
AlwNI	CAGNNNCTG	1 cut(s)	827
Ama87I	CYCGRG	1 cut(s)	1619
AoxI	GGCC	3 cut(s)	445, 599, 1125
ApaLI	GTGCAC	2 cut(s)	1406, 1454
ApeKI	GCWGC	4 cut(s)	5, 1200, 1380, 1676
ApoI	RAATTY	2 cut(s)	234, 1412
AspLEI	GCGC	5 cut(s)	10, 286, 288, 338, 389
AspS9I	GGNCC	1 cut(s)	544
AsuC2I	CCSGG	5 cut(s)	245, 1065, 1374, 1620, 1621
AsuHPI	GGTGA	6 cut(s)	29, 151, 209, 958, 1220, 1405
AsuII	TTCGAA	2 cut(s)	834, 927
AvaI	CYCGRG	1 cut(s)	1619
AvaII	GGWCC	1 cut(s)	544
AxyI	CCTNAGG	1 cut(s)	1649
BaeGI	GKGCMC	2 cut(s)	1410, 1458
BaeI	ACNNNNGTAYC	2 cut(s)	1561, 1594
BanII	GRGCYC	1 cut(s)	1605
BbsI	GAAGAC	1 cut(s)	250
Bbv12I	GWGCWC	6 cut(s)	86, 679, 946, 1410, 1458, 1763
BbvI	GCAGC	4 cut(s)	17, 1212, 1392, 1663
BccI	CCATC	4 cut(s)	131, 141, 1308, 1746
BciT130I	CCWGG	1 cut(s)	1460
BciVI	GTATCC	1 cut(s)	717
BclI	TGATCA	2 cut(s)	573, 1281
BcnI	CCSGG	5 cut(s)	245, 1065, 1374, 1620, 1621
BcoDI	GTCTC	4 cut(s)	48, 347, 983, 1419
BfaI	CTAG	3 cut(s)	594, 1100, 1520
BfmI	CTRYAG	2 cut(s)	1033, 1449
BfoI	RGCGCY	1 cut(s)	11
BfrI	CTTAAG	1 cut(s)	1333
BfuAI	ACCTGC	1 cut(s)	329
BfuI	GTATCC	1 cut(s)	717
BglI	GCCNNNNNGGC	1 cut(s)	1622
BisI	GCNGC	6 cut(s)	6, 277, 516, 1201, 1381, 1677
BlsI	GCNGC	6 cut(s)	7, 278, 517, 1202, 1382, 1678
Bme1390I	CCNGG	6 cut(s)	245, 1065, 1374, 1460, 1620, 1621
Bme18I	GGWCC	1 cut(s)	544
BmeT110I	CYCGRG	1 cut(s)	1619
BmgT120I	GGNCC	1 cut(s)	544
BmiI	GGNNCC	2 cut(s)	546, 1736
BmrFI	CCNGG	6 cut(s)	245, 1065, 1374, 1460, 1620, 1621
BmsI	GCATC	4 cut(s)	502, 808, 1215, 1367
BpiI	GAAGAC	1 cut(s)	250
BpmI	CTGGAG	1 cut(s)	1443
Bpu14I	TTCGAA	2 cut(s)	834, 927
BpuEI	CTTGAG	1 cut(s)	362
BpuMI	CCSGG	5 cut(s)	245, 1065, 1374, 1620, 1621
BsaI	GGTCTC	2 cut(s)	347, 983
BsaJI	CCNNGG	6 cut(s)	204, 267, 1204, 1618, 1619, 1620
Bsc4I	CCNNNNNNNGG	2 cut(s)	522, 1173
Bse118I	RCCGGY	3 cut(s)	10, 389, 597
Bse21I	CCTNAGG	1 cut(s)	1649
Bse3DI	GCAATG	4 cut(s)	424, 508, 649, 879
BseBI	CCWGG	1 cut(s)	1460
BseDI	CCNNGG	6 cut(s)	204, 267, 1204, 1618, 1619, 1620
BseGI	GGATG	5 cut(s)	517, 823, 1230, 1327, 1382
BseLI	CCNNNNNNNGG	2 cut(s)	522, 1173
BseMI	GCAATG	4 cut(s)	424, 508, 649, 879
BseMII	CTCAG	2 cut(s)	872, 1579
BsePI	GCGCGC	1 cut(s)	284
BseRI	GAGGAG	3 cut(s)	1028, 1136, 1371
BseSI	GKGCMC	2 cut(s)	1410, 1458
BseXI	GCAGC	4 cut(s)	17, 1212, 1392, 1663
BsgI	GTGCAG	2 cut(s)	163, 762
Bsh1236I	CGCG	5 cut(s)	276, 284, 286, 989, 1635
BshFI	GGCC	3 cut(s)	447, 601, 1127
BsiHKAI	GWGCWC	6 cut(s)	86, 679, 946, 1410, 1458, 1763
BsiHKCI	CYCGRG	1 cut(s)	1619
BsiSI	CCGG	7 cut(s)	11, 245, 390, 598, 1065, 1373, 1620
BslFI	GGGAC	1 cut(s)	59
BslI	CCNNNNNNNGG	2 cut(s)	522, 1173
BsmAI	GTCTC	4 cut(s)	48, 347, 983, 1419
BsmBI	CGTCTC	1 cut(s)	1419
BsmFI	GGGAC	1 cut(s)	59
BsnI	GGCC	3 cut(s)	447, 601, 1127
Bso31I	GGTCTC	2 cut(s)	347, 983
BsoBI	CYCGRG	1 cut(s)	1619
Bsp119I	TTCGAA	2 cut(s)	834, 927
Bsp1286I	GDGCHC	7 cut(s)	86, 679, 946, 1410, 1458, 1605, 1763
Bsp1407I	TGTACA	1 cut(s)	489
Bsp143I	GATC	4 cut(s)	573, 876, 1281, 1695
Bsp19I	CCATGG	2 cut(s)	204, 267
BspACI	CCGC	5 cut(s)	276, 516, 523, 1228, 1633
BspANI	GGCC	3 cut(s)	447, 601, 1127
BspCNI	CTCAG	2 cut(s)	871, 1578
BspFNI	CGCG	5 cut(s)	276, 284, 286, 989, 1635
BspLI	GGNNCC	2 cut(s)	546, 1736
BspMI	ACCTGC	1 cut(s)	329
BspT104I	TTCGAA	2 cut(s)	834, 927
BspTI	CTTAAG	1 cut(s)	1333
BspTNI	GGTCTC	2 cut(s)	347, 983
BsrBI	CCGCTC	1 cut(s)	518
BsrDI	GCAATG	4 cut(s)	424, 508, 649, 879
BsrFI	RCCGGY	3 cut(s)	10, 389, 597
BsrGI	TGTACA	1 cut(s)	489
BssAI	RCCGGY	3 cut(s)	10, 389, 597
BssECI	CCNNGG	6 cut(s)	204, 267, 1204, 1618, 1619, 1620
BssHII	GCGCGC	1 cut(s)	284
BssMI	GATC	4 cut(s)	573, 876, 1281, 1695
BssT1I	CCWWGG	2 cut(s)	204, 267
Bst2UI	CCWGG	1 cut(s)	1460
Bst4CI	ACNGT	3 cut(s)	1208, 1450, 1734
Bst6I	CTCTTC	2 cut(s)	323, 350
BstAFI	CTTAAG	1 cut(s)	1333
BstAUI	TGTACA	1 cut(s)	489
BstBI	TTCGAA	2 cut(s)	834, 927
BstC8I	GCNNGC	9 cut(s)	12, 274, 286, 385, 391, 599, 636, 640, 1494
BstDEI	CTNAG	5 cut(s)	858, 1117, 1565, 1649, 1680
BstDSI	CCRYGG	3 cut(s)	204, 267, 1204
BstF5I	GGATG	5 cut(s)	517, 823, 1230, 1327, 1382
BstFNI	CGCG	5 cut(s)	276, 284, 286, 989, 1635
BstH2I	RGCGCY	1 cut(s)	11
BstHHI	GCGC	5 cut(s)	10, 286, 288, 338, 389
BstKTI	GATC	4 cut(s)	576, 879, 1284, 1698
BstMAI	GTCTC	4 cut(s)	48, 347, 983, 1419
BstMBI	GATC	4 cut(s)	573, 876, 1281, 1695
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 285, 869, 1622
BstNI	CCWGG	1 cut(s)	1460
BstNSI	RCATGY	1 cut(s)	793
BstSCI	CCNGG	6 cut(s)	243, 1063, 1372, 1458, 1618, 1619
BstSFI	CTRYAG	2 cut(s)	1033, 1449
BstSLI	GKGCMC	2 cut(s)	1410, 1458
BstUI	CGCG	5 cut(s)	276, 284, 286, 989, 1635
BstV1I	GCAGC	4 cut(s)	17, 1212, 1392, 1663
BstV2I	GAAGAC	1 cut(s)	250
Bsu36I	CCTNAGG	1 cut(s)	1649
BsuI	GTATCC	1 cut(s)	717
BsuRI	GGCC	3 cut(s)	447, 601, 1127
BtgI	CCRYGG	3 cut(s)	204, 267, 1204
BtsCI	GGATG	5 cut(s)	517, 823, 1230, 1327, 1382
BtsI	GCAGTG	2 cut(s)	774, 828
BtsIMutI	CAGTG	3 cut(s)	774, 779, 828
BveI	ACCTGC	1 cut(s)	329
Cac8I	GCNNGC	9 cut(s)	12, 274, 286, 385, 391, 599, 636, 640, 1494
CaiI	CAGNNNCTG	1 cut(s)	827
CfoI	GCGC	5 cut(s)	10, 286, 288, 338, 389
Cfr10I	RCCGGY	3 cut(s)	10, 389, 597
Cfr13I	GGNCC	1 cut(s)	544
Cfr9I	CCCGGG	1 cut(s)	1619
CseI	GACGC	2 cut(s)	1122, 1624
Csp6I	GTAC	3 cut(s)	198, 490, 985
CspCI	CAANNNNNGTGG	2 cut(s)	861, 896
CviQI	GTAC	3 cut(s)	198, 490, 985
DdeI	CTNAG	5 cut(s)	858, 1117, 1565, 1649, 1680
DpnI	GATC	4 cut(s)	575, 878, 1283, 1697
DpnII	GATC	4 cut(s)	573, 876, 1281, 1695
DraIII	CACNNNGTG	1 cut(s)	498
DrdI	GACNNNNNNGTC	2 cut(s)	152, 254
DseDI	GACNNNNNNGTC	2 cut(s)	152, 254
EaeI	YGGCCR	1 cut(s)	599
Eam1104I	CTCTTC	2 cut(s)	323, 350
EarI	CTCTTC	2 cut(s)	323, 350
Eco130I	CCWWGG	2 cut(s)	204, 267
Eco147I	AGGCCT	1 cut(s)	1127
Eco24I	GRGCYC	1 cut(s)	1605
Eco31I	GGTCTC	2 cut(s)	347, 983
Eco32I	GATATC	1 cut(s)	964
Eco47I	GGWCC	1 cut(s)	544
Eco81I	CCTNAGG	1 cut(s)	1649
Eco88I	CYCGRG	1 cut(s)	1619
EcoRI	GAATTC	1 cut(s)	1412
EcoRII	CCWGG	1 cut(s)	1458
EcoRV	GATATC	1 cut(s)	964
EcoT14I	CCWWGG	2 cut(s)	204, 267
EcoT38I	GRGCYC	1 cut(s)	1605
ErhI	CCWWGG	2 cut(s)	204, 267
Esp3I	CGTCTC	1 cut(s)	1419
FaqI	GGGAC	1 cut(s)	59
FauI	CCCGC	2 cut(s)	516, 1221
FauNDI	CATATG	1 cut(s)	886
FbaI	TGATCA	2 cut(s)	573, 1281
FblI	GTMKAC	1 cut(s)	1215
Fnu4HI	GCNGC	6 cut(s)	6, 277, 516, 1201, 1381, 1677
FokI	GGATG	5 cut(s)	524, 830, 1237, 1334, 1389
FriOI	GRGCYC	1 cut(s)	1605
Fsp4HI	GCNGC	6 cut(s)	6, 277, 516, 1201, 1381, 1677
FspBI	CTAG	3 cut(s)	594, 1100, 1520
FspI	TGCGCA	1 cut(s)	337
GlaI	GCGC	5 cut(s)	9, 285, 287, 337, 388
GluI	GCNGC	6 cut(s)	6, 277, 516, 1201, 1381, 1677
GsuI	CTGGAG	1 cut(s)	1443
HaeII	RGCGCY	1 cut(s)	11
HaeIII	GGCC	3 cut(s)	447, 601, 1127
HapII	CCGG	7 cut(s)	11, 245, 390, 598, 1065, 1373, 1620
HgaI	GACGC	2 cut(s)	1122, 1624
HhaI	GCGC	5 cut(s)	10, 286, 288, 338, 389
Hin6I	GCGC	5 cut(s)	8, 284, 286, 336, 387
HinP1I	GCGC	5 cut(s)	8, 284, 286, 336, 387
HincII	GTYRAC	1 cut(s)	1468
HindII	GTYRAC	1 cut(s)	1468
HindIII	AAGCTT	1 cut(s)	808
HinfI	GANTC	3 cut(s)	1162, 1259, 1369
HpaII	CCGG	7 cut(s)	11, 245, 390, 598, 1065, 1373, 1620
HphI	GGTGA	6 cut(s)	29, 151, 209, 958, 1220, 1405
Hpy166II	GTNNAC	7 cut(s)	492, 772, 1216, 1396, 1408, 1456, 1468
Hpy188I	TCNGA	2 cut(s)	292, 1568
Hpy188III	TCNNGA	6 cut(s)	626, 1110, 1422, 1508, 1639, 1721
Hpy8I	GTNNAC	7 cut(s)	492, 772, 1216, 1396, 1408, 1456, 1468
Hpy99I	CGWCG	3 cut(s)	257, 373, 1640
HpyAV	CCTTC	1 cut(s)	404
HpyCH4III	ACNGT	3 cut(s)	1208, 1450, 1734
HpyCH4IV	ACGT	3 cut(s)	327, 762, 1181
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 285, 869, 1622
HpyF3I	CTNAG	5 cut(s)	858, 1117, 1565, 1649, 1680
HpySE526I	ACGT	3 cut(s)	327, 762, 1181
HspAI	GCGC	5 cut(s)	8, 284, 286, 336, 387
KroI	GCCGGC	3 cut(s)	10, 389, 597
KroNI	GCCGGC	3 cut(s)	12, 391, 599
Ksp22I	TGATCA	2 cut(s)	573, 1281
Kzo9I	GATC	4 cut(s)	573, 876, 1281, 1695
LmnI	GCTCC	3 cut(s)	701, 1388, 1432
Lsp1109I	GCAGC	4 cut(s)	17, 1212, 1392, 1663
LweI	GCATC	4 cut(s)	502, 808, 1215, 1367
MaeI	CTAG	3 cut(s)	594, 1100, 1520
MaeII	ACGT	3 cut(s)	327, 762, 1181
MaeIII	GTNAC	2 cut(s)	661, 1146
MalI	GATC	4 cut(s)	575, 878, 1283, 1697
MbiI	CCGCTC	1 cut(s)	518
MboI	GATC	4 cut(s)	573, 876, 1281, 1695
MfeI	CAATTG	1 cut(s)	419
MhlI	GDGCHC	7 cut(s)	86, 679, 946, 1410, 1458, 1605, 1763
MluI	ACGCGT	1 cut(s)	987
MlyI	GAGTC	2 cut(s)	1156, 1253
MmeI	TCCRAC	2 cut(s)	163, 1753
MroNI	GCCGGC	3 cut(s)	10, 389, 597
MslI	CAYNNNNRTG	6 cut(s)	464, 732, 920, 1209, 1223, 1391
MspCI	CTTAAG	1 cut(s)	1333
MspI	CCGG	7 cut(s)	11, 245, 390, 598, 1065, 1373, 1620
MspR9I	CCNGG	6 cut(s)	245, 1065, 1374, 1460, 1620, 1621
MunI	CAATTG	1 cut(s)	419
MvaI	CCWGG	1 cut(s)	1460
MvnI	CGCG	5 cut(s)	276, 284, 286, 989, 1635
MwoI	GCNNNNNNNGC	4 cut(s)	11, 285, 869, 1622
NaeI	GCCGGC	3 cut(s)	12, 391, 599
NciI	CCSGG	5 cut(s)	245, 1065, 1374, 1620, 1621
NcoI	CCATGG	2 cut(s)	204, 267
NdeI	CATATG	1 cut(s)	886
NdeII	GATC	4 cut(s)	573, 876, 1281, 1695
NgoMIV	GCCGGC	3 cut(s)	10, 389, 597
NlaIV	GGNNCC	2 cut(s)	546, 1736
NmeAIII	GCCGAG	1 cut(s)	499
NsbI	TGCGCA	1 cut(s)	337
NspI	RCATGY	1 cut(s)	793
NspV	TTCGAA	2 cut(s)	834, 927
PauI	GCGCGC	1 cut(s)	284
PceI	AGGCCT	1 cut(s)	1127
PciI	ACATGT	1 cut(s)	789
PcsI	WCGNNNNNNNCGW	1 cut(s)	191
PdiI	GCCGGC	3 cut(s)	12, 391, 599
PfeI	GAWTC	1 cut(s)	1369
PflFI	GACNNNGTC	1 cut(s)	251
PflMI	CCANNNNNTGG	1 cut(s)	1173
PfoI	TCCNGGA	1 cut(s)	1372
PkrI	GCNGC	6 cut(s)	7, 278, 517, 1202, 1382, 1678
PleI	GAGTC	2 cut(s)	1156, 1253
PpsI	GAGTC	2 cut(s)	1156, 1253
PscI	ACATGT	1 cut(s)	789
PsiI	TTATAA	1 cut(s)	482
Psp1406I	AACGTT	1 cut(s)	1181
Psp6I	CCWGG	1 cut(s)	1458
PspGI	CCWGG	1 cut(s)	1458
PspN4I	GGNNCC	2 cut(s)	546, 1736
PspPI	GGNCC	1 cut(s)	544
PstNI	CAGNNNCTG	1 cut(s)	827
PsyI	GACNNNGTC	1 cut(s)	251
PteI	GCGCGC	1 cut(s)	284
RsaI	GTAC	3 cut(s)	199, 491, 986
RsaNI	GTAC	3 cut(s)	198, 490, 985
RseI	CAYNNNNRTG	6 cut(s)	464, 732, 920, 1209, 1223, 1391
SatI	GCNGC	6 cut(s)	6, 277, 516, 1201, 1381, 1677
Sau3AI	GATC	4 cut(s)	573, 876, 1281, 1695
Sau96I	GGNCC	1 cut(s)	544
SchI	GAGTC	2 cut(s)	1156, 1253
ScrFI	CCNGG	6 cut(s)	245, 1065, 1374, 1460, 1620, 1621
SduI	GDGCHC	7 cut(s)	86, 679, 946, 1410, 1458, 1605, 1763
SfaNI	GCATC	4 cut(s)	502, 808, 1215, 1367
SfcI	CTRYAG	2 cut(s)	1033, 1449
SfuI	TTCGAA	2 cut(s)	834, 927
SinI	GGWCC	1 cut(s)	544
SmaI	CCCGGG	1 cut(s)	1621
SmiMI	CAYNNNNRTG	6 cut(s)	464, 732, 920, 1209, 1223, 1391
SmlI	CTYRAG	2 cut(s)	377, 1333
SmoI	CTYRAG	2 cut(s)	377, 1333
SseBI	AGGCCT	1 cut(s)	1127
SsiI	CCGC	5 cut(s)	276, 516, 523, 1228, 1633
SspMI	CTAG	3 cut(s)	594, 1100, 1520
StuI	AGGCCT	1 cut(s)	1127
StyD4I	CCNGG	6 cut(s)	243, 1063, 1372, 1458, 1618, 1619
StyI	CCWWGG	2 cut(s)	204, 267
TaaI	ACNGT	3 cut(s)	1208, 1450, 1734
TaiI	ACGT	3 cut(s)	330, 765, 1184
TaqII	GACCGA	1 cut(s)	1095
TatI	WGTACW	1 cut(s)	489
TauI	GCSGC	2 cut(s)	279, 518
TfiI	GAWTC	1 cut(s)	1369
TscAI	CASTG	3 cut(s)	781, 786, 828
TseI	GCWGC	4 cut(s)	5, 1200, 1380, 1676
TspDTI	ATGAA	5 cut(s)	675, 744, 950, 1126, 1517
TspGWI	ACGGA	4 cut(s)	142, 557, 1255, 1767
TspMI	CCCGGG	1 cut(s)	1619
TspRI	CASTG	3 cut(s)	781, 786, 828
Tth111I	GACNNNGTC	1 cut(s)	251
Van91I	CCANNNNNTGG	1 cut(s)	1173
Vha464I	CTTAAG	1 cut(s)	1333
VneI	GTGCAC	2 cut(s)	1406, 1454
VpaK11BI	GGWCC	1 cut(s)	544
XapI	RAATTY	2 cut(s)	234, 1412
XceI	RCATGY	1 cut(s)	793
XmaI	CCCGGG	1 cut(s)	1619
XmiI	GTMKAC	1 cut(s)	1215
XspI	CTAG	3 cut(s)	594, 1100, 1520

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.