Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0016684

Physical Location & Seq

Genomic Coordinates Reverse (-)

62130767 .. 62134173

Gene Structure 3407 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40782

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGCATCACTGGCTGTCCAAATAACCCCAATCTCTCACCCAAAAGCTCACACTCACTCCCCAATCTCTCTCATCCCTAAATGCACCTCTCTCACAGAACTCCAGCAAATCCAAGCCTTTTCCATCAAAACCCATCTCCAATATGACTTATCTGTCCTGGCCAAGCTCATCAACTCCTGCACACTCAACCCAACTAGCAGACACTCCATGGACTATGCCCACCACCTGTTCCACCAAATTCCCCACCCGGACATTGTCGTCTTCAACACCATGGCACGTGGTTACTCACGCTCCGATACCCCATTTCGCGCTATTTCACTCTTTTCCCAGGTTCTATCCTCAGGTCTCCTCCCAGATGACTACACATTCCCGGCTCTTCTCAAGGCTTGCGCCGGCTCTAAAGCCTTAGAAGAAGGGAAGCAGTTGCATTGCTATGTTATCAAATATGGAATGCAACTTAACATATTTGTGTGCCCTGCTCTTATAAATATGTACACTGAGTGCGGTGATGTGGATGCGGCTCGCCGGGTTTTTGATAAGATACCGGACCCTTGTGTTGTTGTGCATAATGCTATGATCACAGGGTATGCTAGAAACAGTCTGCCCAATGAGGCATTGGCATTGTTTCGAGAGTTGCAAGCGAGTGGTCTTAAGCCAACCGAGGTTACTATGCTTAGTGCTCTTTCGTCGTGCGCTTTGTTAGGTGCATTGGACTTGGGGAAGTGGATTCATGAGTATGTTAAGAAGAATAGGTTTGATAGATATGTTAAAGTGAACACTGCATTAATAGATATGTATTCAAAGTGTGGGAGCCTGAAGGATGCAGTGTCTGTGTTTGAGAACATGAGTGTGAAAGACACACAGGCTTGGTCTGCAATGATTGTGGCGTATGCAACACATGGGAATGTTTCCAAAGCTATATCGATGTTTGAAGAGATGAAGAAGGCACGAATTCGACCTGATGAGATCACATTTCTGGGTCTCTTATATGCGTGTAGTCATGCTGGATTAGTTGAGGAGGGTTGCAAGTATTTCTACAGCATGAGTGAGAACTATGGGATTATACCCAGGATTAAGCATTATGGGTGTGTGGTGGATTTGCTAGGTCGGGCTGGACGTTTAGGGGAGGCTTACAAGTTCATAGTTGAGCTACCAATTAAGCCTACGCCTATAATCTGGCGAACATTGTTATCTGCTTGTTGCAGTCATGGTGATGTAGACATGGGGATGCGGGTGCTTGAGCGAATTTTTGAGTTAGATGACTCTCATGGTGGGGATTATGTGATTATATCTAACTTGTGTGCAAGAACAGGAAGATGGGAGGATGTTGATTACTTGAGGAAACTGATGAAAGACAGAGGCATTGTAAAGATTCCCGGGTGTAGCGCCATAGAGATGAACAATGTAGTGCATGAATTCTTCTCTGGGGATGGCGAGCGTTCTGTTTCCAAAGTACTGCGTCGGGCAGTTGATGAGTTGATTGAAGAATTAAAGCTGGCCGGATATGTTCCAGATACTTCTTTAGTATTTCATTCTGACATGGATGATAGAGAGAGAGAGCTTTCTCTTAGATGTCATAGTGAGAAATTAGCCATTACTTATGGGCTCTTAAACACAGCTGCTGGGACAACAATTCGAGTTGTGAAGAACCTTAGGGTATGTGGGGATTGCCACTCTGCTGCTAAATACATATCATTGATCTTTAATAGACAAATAGTTCTTAGAGATGTTCAACGGTTCCATCATTTCAGAGACGGCAAGTGTTCTTGTGGAGACTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

594

Amino Acids

66.58

Weight (kDa)

7.97

Isoelectric Point (pI)

32.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	83 - 131	3.9e-07	PPR repeat family
PPR_2	PF13041	184 - 231	3.7e-08	PPR repeat family
PPR_2	PF13041	286 - 333	2.1e-10	PPR repeat family
PPR	PF01535	289 - 317	1.9e-06	PPR repeat
E_motif	PF20431	403 - 465	9.8e-17	E motif
DYW_deaminase	PF14432	501 - 594	3.8e-40	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02980 AT5G66520
fragaria_vesca	FvH4_4g31300
malus_domestica	MD13G1071700.v1.1
prunus_persica	Prupe.1G275200_v2.0.a1
pyrus_communis	pycom13g06430
rosa_chinensis	RchiOBHm_Chr4g0439791
rosa_laevigata	RLG00000006238
rosa_multiflora	Rmu_sc0010226.1_g000006 Rmu_ssc0000029.1_g000006
rosa_roxburghii	Rroxscaffold_5G00380690
rosa_rugosa	Rorug04G0321400
rosa_samantha	Rh4BG384700
rosa_wichuraiana	Rw4G031820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	485
AasI	GACNNNNNNGTC	2 cut(s)	152, 257
AccI	GTMKAC	1 cut(s)	1218
AccII	CGCG	1 cut(s)	309
AciI	CCGC	3 cut(s)	504, 518, 1231
AcoI	YGGCCR	2 cut(s)	159, 1497
AcsI	RAATTY	4 cut(s)	237, 951, 1245, 1415
AcuI	CTGAAG	1 cut(s)	836
AcvI	CACGTG	1 cut(s)	278
AdeI	CACNNNGTG	1 cut(s)	501
AfaI	GTAC	2 cut(s)	494, 1455
AflII	CTTAAG	1 cut(s)	650
AgsI	TTSAA	5 cut(s)	265, 801, 932, 1484, 1733
AjnI	CCWGG	3 cut(s)	156, 327, 1067
AluBI	AGCT	7 cut(s)	47, 166, 917, 1150, 1495, 1561, 1619
AluI	AGCT	7 cut(s)	47, 166, 917, 1150, 1495, 1561, 1619
Alw21I	GWGCWC	1 cut(s)	682
Alw26I	GTCTC	4 cut(s)	350, 986, 1746, 1767
AlwNI	CAGNNNCTG	2 cut(s)	830, 1622
Ama87I	CYCGRG	1 cut(s)	1376
AoxI	GGCC	2 cut(s)	159, 1497
ApeKI	GCWGC	2 cut(s)	1619, 1679
ApoI	RAATTY	4 cut(s)	237, 951, 1245, 1415
AseI	ATTAAT	1 cut(s)	785
AspLEI	GCGC	4 cut(s)	311, 392, 695, 1388
AspS9I	GGNCC	1 cut(s)	547
AsuC2I	CCSGG	5 cut(s)	248, 371, 527, 1377, 1378
AsuHPI	GGTGA	3 cut(s)	29, 518, 1223
AvaI	CYCGRG	1 cut(s)	1376
AvaII	GGWCC	1 cut(s)	547
AxyI	CCTNAGG	2 cut(s)	340, 1652
BaeGI	GKGCMC	1 cut(s)	476
BalI	TGGCCA	1 cut(s)	161
BanII	GRGCYC	1 cut(s)	1608
BbrPI	CACGTG	1 cut(s)	278
BbsI	GAAGAC	1 cut(s)	253
Bbv12I	GWGCWC	1 cut(s)	682
BbvI	GCAGC	2 cut(s)	1606, 1666
BccI	CCATC	5 cut(s)	131, 141, 1311, 1424, 1749
BceAI	ACGGC	1 cut(s)	1771
BciT130I	CCWGG	3 cut(s)	158, 329, 1069
BclI	TGATCA	1 cut(s)	576
BcnI	CCSGG	5 cut(s)	248, 371, 527, 1377, 1378
BcoDI	GTCTC	4 cut(s)	350, 986, 1746, 1767
BfaI	CTAG	3 cut(s)	195, 591, 1103
BfmI	CTRYAG	1 cut(s)	1036
BfoI	RGCGCY	1 cut(s)	1389
BfrI	CTTAAG	1 cut(s)	650
BisI	GCNGC	3 cut(s)	519, 1620, 1680
BlsI	GCNGC	3 cut(s)	520, 1621, 1681
BmcAI	AGTACT	1 cut(s)	1455
Bme1390I	CCNGG	8 cut(s)	158, 248, 329, 371, 527, 1069, 1377, 1378
Bme18I	GGWCC	1 cut(s)	547
BmeT110I	CYCGRG	1 cut(s)	1376
BmgT120I	GGNCC	1 cut(s)	547
BmiI	GGNNCC	3 cut(s)	549, 812, 1739
BmrFI	CCNGG	8 cut(s)	158, 248, 329, 371, 527, 1069, 1377, 1378
BmsI	GCATC	4 cut(s)	14, 505, 811, 1218
BpiI	GAAGAC	1 cut(s)	253
BpmI	CTGGAG	1 cut(s)	86
BpuEI	CTTGAG	3 cut(s)	365, 1259, 1357
BpuMI	CCSGG	5 cut(s)	248, 371, 527, 1377, 1378
Bsa29I	ATCGAT	1 cut(s)	923
BsaAI	YACGTR	1 cut(s)	278
BsaI	GGTCTC	2 cut(s)	350, 986
BsaJI	CCNNGG	6 cut(s)	207, 270, 327, 660, 1067, 1376
BsaWI	WCCGGW	1 cut(s)	544
BsaXI	ACNNNNNCTCC	4 cut(s)	41, 71, 275, 305
Bse118I	RCCGGY	1 cut(s)	392
Bse1I	ACTGG	1 cut(s)	15
Bse21I	CCTNAGG	2 cut(s)	340, 1652
Bse3DI	GCAATG	2 cut(s)	427, 882
BseBI	CCWGG	3 cut(s)	158, 329, 1069
BseCI	ATCGAT	1 cut(s)	923
BseDI	CCNNGG	6 cut(s)	207, 270, 327, 660, 1067, 1376
BseGI	GGATG	7 cut(s)	72, 520, 826, 1233, 1330, 1435, 1549
BseMI	GCAATG	2 cut(s)	427, 882
BseMII	CTCAG	2 cut(s)	354, 489
BseNI	ACTGG	1 cut(s)	15
BseRI	GAGGAG	2 cut(s)	338, 1031
BseSI	GKGCMC	1 cut(s)	476
BseXI	GCAGC	2 cut(s)	1606, 1666
BseYI	CCCAGC	1 cut(s)	1622
BsgI	GTGCAG	1 cut(s)	163
Bsh1236I	CGCG	1 cut(s)	309
BshFI	GGCC	2 cut(s)	161, 1499
BshVI	ATCGAT	1 cut(s)	923
BsiHKAI	GWGCWC	1 cut(s)	682
BsiHKCI	CYCGRG	1 cut(s)	1376
BsiSI	CCGG	7 cut(s)	248, 371, 393, 526, 545, 1377, 1500
BslFI	GGGAC	1 cut(s)	1639
BsmAI	GTCTC	4 cut(s)	350, 986, 1746, 1767
BsmBI	CGTCTC	1 cut(s)	1746
BsmFI	GGGAC	1 cut(s)	1639
BsmI	GAATGC	1 cut(s)	456
BsnI	GGCC	2 cut(s)	161, 1499
Bso31I	GGTCTC	2 cut(s)	350, 986
BsoBI	CYCGRG	1 cut(s)	1376
Bsp1286I	GDGCHC	3 cut(s)	476, 682, 1608
Bsp1407I	TGTACA	1 cut(s)	492
Bsp143I	GATC	3 cut(s)	576, 966, 1698
Bsp19I	CCATGG	2 cut(s)	207, 270
BspACI	CCGC	3 cut(s)	504, 518, 1231
BspANI	GGCC	2 cut(s)	161, 1499
BspCNI	CTCAG	2 cut(s)	353, 490
BspDI	ATCGAT	1 cut(s)	923
BspFNI	CGCG	1 cut(s)	309
BspHI	TCATGA	1 cut(s)	730
BspLI	GGNNCC	3 cut(s)	549, 812, 1739
BspQI	GCTCTTC	1 cut(s)	381
BspTI	CTTAAG	1 cut(s)	650
BspTNI	GGTCTC	2 cut(s)	350, 986
BsrDI	GCAATG	2 cut(s)	427, 882
BsrFI	RCCGGY	1 cut(s)	392
BsrGI	TGTACA	1 cut(s)	492
BsrI	ACTGG	1 cut(s)	15
BssAI	RCCGGY	1 cut(s)	392
BssECI	CCNNGG	6 cut(s)	207, 270, 327, 660, 1067, 1376
BssMI	GATC	3 cut(s)	576, 966, 1698
BssT1I	CCWWGG	2 cut(s)	207, 270
Bst2UI	CCWGG	3 cut(s)	158, 329, 1069
Bst4CI	ACNGT	2 cut(s)	599, 1737
Bst6I	CTCTTC	2 cut(s)	381, 927
BstAFI	CTTAAG	1 cut(s)	650
BstAUI	TGTACA	1 cut(s)	492
BstBAI	YACGTR	1 cut(s)	278
BstC8I	GCNNGC	6 cut(s)	388, 394, 523, 639, 1436, 1497
BstDEI	CTNAG	7 cut(s)	340, 406, 498, 674, 1568, 1652, 1721
BstDSI	CCRYGG	2 cut(s)	207, 270
BstF5I	GGATG	7 cut(s)	72, 520, 826, 1233, 1330, 1435, 1549
BstFNI	CGCG	1 cut(s)	309
BstH2I	RGCGCY	1 cut(s)	1389
BstHHI	GCGC	4 cut(s)	311, 392, 695, 1388
BstKTI	GATC	3 cut(s)	579, 969, 1701
BstMAI	GTCTC	4 cut(s)	350, 986, 1746, 1767
BstMBI	GATC	3 cut(s)	576, 966, 1698
BstMWI	GCNNNNNNNGC	2 cut(s)	11, 872
BstNI	CCWGG	3 cut(s)	158, 329, 1069
BstSCI	CCNGG	8 cut(s)	156, 246, 327, 369, 525, 1067, 1375, 1376
BstSFI	CTRYAG	1 cut(s)	1036
BstSLI	GKGCMC	1 cut(s)	476
BstUI	CGCG	1 cut(s)	309
BstV1I	GCAGC	2 cut(s)	1606, 1666
BstV2I	GAAGAC	1 cut(s)	253
Bsu15I	ATCGAT	1 cut(s)	923
Bsu36I	CCTNAGG	2 cut(s)	340, 1652
BsuRI	GGCC	2 cut(s)	161, 1499
BsuTUI	ATCGAT	1 cut(s)	923
BtgI	CCRYGG	2 cut(s)	207, 270
BtsCI	GGATG	7 cut(s)	72, 520, 826, 1233, 1330, 1435, 1549
BtsI	GCAGTG	2 cut(s)	777, 831
BtsIMutI	CAGTG	4 cut(s)	8, 495, 777, 831
Cac8I	GCNNGC	6 cut(s)	388, 394, 523, 639, 1436, 1497
CaiI	CAGNNNCTG	2 cut(s)	830, 1622
CciI	TCATGA	1 cut(s)	730
CfoI	GCGC	4 cut(s)	311, 392, 695, 1388
Cfr10I	RCCGGY	1 cut(s)	392
Cfr13I	GGNCC	1 cut(s)	547
Cfr9I	CCCGGG	1 cut(s)	1376
ClaI	ATCGAT	1 cut(s)	923
CseI	GACGC	1 cut(s)	1448
Csp6I	GTAC	2 cut(s)	493, 1454
CspCI	CAANNNNNGTGG	2 cut(s)	864, 899
CviQI	GTAC	2 cut(s)	493, 1454
DdeI	CTNAG	7 cut(s)	340, 406, 498, 674, 1568, 1652, 1721
DpnI	GATC	3 cut(s)	578, 968, 1700
DpnII	GATC	3 cut(s)	576, 966, 1698
DraIII	CACNNNGTG	1 cut(s)	501
DrdI	GACNNNNNNGTC	2 cut(s)	152, 257
DseDI	GACNNNNNNGTC	2 cut(s)	152, 257
EaeI	YGGCCR	2 cut(s)	159, 1497
Eam1104I	CTCTTC	2 cut(s)	381, 927
EarI	CTCTTC	2 cut(s)	381, 927
Eco130I	CCWWGG	2 cut(s)	207, 270
Eco24I	GRGCYC	1 cut(s)	1608
Eco31I	GGTCTC	2 cut(s)	350, 986
Eco47I	GGWCC	1 cut(s)	547
Eco57I	CTGAAG	1 cut(s)	836
Eco72I	CACGTG	1 cut(s)	278
Eco81I	CCTNAGG	2 cut(s)	340, 1652
Eco88I	CYCGRG	1 cut(s)	1376
EcoRI	GAATTC	2 cut(s)	951, 1415
EcoRII	CCWGG	3 cut(s)	156, 327, 1067
EcoT14I	CCWWGG	2 cut(s)	207, 270
EcoT38I	GRGCYC	1 cut(s)	1608
ErhI	CCWWGG	2 cut(s)	207, 270
Esp3I	CGTCTC	1 cut(s)	1746
FaqI	GGGAC	1 cut(s)	1639
FauI	CCCGC	1 cut(s)	1224
FbaI	TGATCA	1 cut(s)	576
FblI	GTMKAC	1 cut(s)	1218
Fnu4HI	GCNGC	3 cut(s)	519, 1620, 1680
FokI	GGATG	7 cut(s)	59, 527, 833, 1240, 1337, 1442, 1556
FriOI	GRGCYC	1 cut(s)	1608
Fsp4HI	GCNGC	3 cut(s)	519, 1620, 1680
FspBI	CTAG	3 cut(s)	195, 591, 1103
GlaI	GCGC	4 cut(s)	310, 391, 694, 1387
GluI	GCNGC	3 cut(s)	519, 1620, 1680
GsaI	CCCAGC	1 cut(s)	1626
GsuI	CTGGAG	1 cut(s)	86
HaeII	RGCGCY	1 cut(s)	1389
HaeIII	GGCC	2 cut(s)	161, 1499
HapII	CCGG	7 cut(s)	248, 371, 393, 526, 545, 1377, 1500
HgaI	GACGC	1 cut(s)	1448
HhaI	GCGC	4 cut(s)	311, 392, 695, 1388
Hin6I	GCGC	4 cut(s)	309, 390, 693, 1386
HinP1I	GCGC	4 cut(s)	309, 390, 693, 1386
HinfI	GANTC	3 cut(s)	727, 1262, 1372
HpaII	CCGG	7 cut(s)	248, 371, 393, 526, 545, 1377, 1500
HphI	GGTGA	3 cut(s)	29, 518, 1223
Hpy166II	GTNNAC	3 cut(s)	495, 775, 1219
Hpy188I	TCNGA	3 cut(s)	295, 1537, 1751
Hpy188III	TCNNGA	3 cut(s)	629, 731, 1511
Hpy8I	GTNNAC	3 cut(s)	495, 775, 1219
Hpy99I	CGWCG	2 cut(s)	691, 1464
HpyAV	CCTTC	3 cut(s)	407, 811, 937
HpyCH4III	ACNGT	2 cut(s)	599, 1737
HpyCH4IV	ACGT	2 cut(s)	277, 1117
HpyF10VI	GCNNNNNNNGC	2 cut(s)	11, 872
HpyF3I	CTNAG	7 cut(s)	340, 406, 498, 674, 1568, 1652, 1721
HpySE526I	ACGT	2 cut(s)	277, 1117
HspAI	GCGC	4 cut(s)	309, 390, 693, 1386
KroI	GCCGGC	1 cut(s)	392
KroNI	GCCGGC	1 cut(s)	394
Ksp22I	TGATCA	1 cut(s)	576
Kzo9I	GATC	3 cut(s)	576, 966, 1698
LguI	GCTCTTC	1 cut(s)	381
LmnI	GCTCC	2 cut(s)	296, 810
Lsp1109I	GCAGC	2 cut(s)	1606, 1666
LweI	GCATC	4 cut(s)	14, 505, 811, 1218
MaeI	CTAG	3 cut(s)	195, 591, 1103
MaeII	ACGT	2 cut(s)	277, 1117
MaeIII	GTNAC	2 cut(s)	281, 664
MalI	GATC	3 cut(s)	578, 968, 1700
MboI	GATC	3 cut(s)	576, 966, 1698
MhlI	GDGCHC	3 cut(s)	476, 682, 1608
MlsI	TGGCCA	1 cut(s)	161
MluCI	AATT	8 cut(s)	237, 951, 1155, 1245, 1415, 1487, 1586, 1632
MluNI	TGGCCA	1 cut(s)	161
MlyI	GAGTC	1 cut(s)	1256
Mox20I	TGGCCA	1 cut(s)	161
MroNI	GCCGGC	1 cut(s)	392
MscI	TGGCCA	1 cut(s)	161
MslI	CAYNNNNRTG	8 cut(s)	432, 467, 735, 848, 903, 1212, 1226, 1394
Msp20I	TGGCCA	1 cut(s)	161
MspA1I	CMGCKG	1 cut(s)	1619
MspCI	CTTAAG	1 cut(s)	650
MspI	CCGG	7 cut(s)	248, 371, 393, 526, 545, 1377, 1500
MspR9I	CCNGG	8 cut(s)	158, 248, 329, 371, 527, 1069, 1377, 1378
Mva1269I	GAATGC	1 cut(s)	456
MvaI	CCWGG	3 cut(s)	158, 329, 1069
MvnI	CGCG	1 cut(s)	309
MwoI	GCNNNNNNNGC	2 cut(s)	11, 872
NaeI	GCCGGC	1 cut(s)	394
NciI	CCSGG	5 cut(s)	248, 371, 527, 1377, 1378
NcoI	CCATGG	2 cut(s)	207, 270
NdeII	GATC	3 cut(s)	576, 966, 1698
NgoMIV	GCCGGC	1 cut(s)	392
NlaIV	GGNNCC	3 cut(s)	549, 812, 1739
PagI	TCATGA	1 cut(s)	730
PciSI	GCTCTTC	1 cut(s)	381
PcsI	WCGNNNNNNNCGW	1 cut(s)	1114
PctI	GAATGC	1 cut(s)	456
PdiI	GCCGGC	1 cut(s)	394
PfeI	GAWTC	2 cut(s)	727, 1372
PflFI	GACNNNGTC	1 cut(s)	254
PkrI	GCNGC	3 cut(s)	520, 1621, 1681
PleI	GAGTC	1 cut(s)	1256
PmaCI	CACGTG	1 cut(s)	278
PmlI	CACGTG	1 cut(s)	278
PpsI	GAGTC	1 cut(s)	1256
Ppu21I	YACGTR	1 cut(s)	278
PshBI	ATTAAT	1 cut(s)	785
PsiI	TTATAA	1 cut(s)	485
Psp6I	CCWGG	3 cut(s)	156, 327, 1067
PspCI	CACGTG	1 cut(s)	278
PspFI	CCCAGC	1 cut(s)	1622
PspGI	CCWGG	3 cut(s)	156, 327, 1067
PspN4I	GGNNCC	3 cut(s)	549, 812, 1739
PspPI	GGNCC	1 cut(s)	547
PstNI	CAGNNNCTG	2 cut(s)	830, 1622
PsyI	GACNNNGTC	1 cut(s)	254
PvuII	CAGCTG	1 cut(s)	1619
RsaI	GTAC	2 cut(s)	494, 1455
RsaNI	GTAC	2 cut(s)	493, 1454
RseI	CAYNNNNRTG	8 cut(s)	432, 467, 735, 848, 903, 1212, 1226, 1394
SapI	GCTCTTC	1 cut(s)	381
SatI	GCNGC	3 cut(s)	519, 1620, 1680
Sau3AI	GATC	3 cut(s)	576, 966, 1698
Sau96I	GGNCC	1 cut(s)	547
ScaI	AGTACT	1 cut(s)	1455
SchI	GAGTC	1 cut(s)	1256
ScrFI	CCNGG	8 cut(s)	158, 248, 329, 371, 527, 1069, 1377, 1378
SduI	GDGCHC	3 cut(s)	476, 682, 1608
SfaNI	GCATC	4 cut(s)	14, 505, 811, 1218
SfcI	CTRYAG	1 cut(s)	1036
SinI	GGWCC	1 cut(s)	547
SmaI	CCCGGG	1 cut(s)	1378
SmiMI	CAYNNNNRTG	8 cut(s)	432, 467, 735, 848, 903, 1212, 1226, 1394
SmlI	CTYRAG	4 cut(s)	380, 650, 1238, 1336
SmoI	CTYRAG	4 cut(s)	380, 650, 1238, 1336
Sse9I	AATT	8 cut(s)	237, 951, 1155, 1245, 1415, 1487, 1586, 1632
SsiI	CCGC	3 cut(s)	504, 518, 1231
SspMI	CTAG	3 cut(s)	195, 591, 1103
StyD4I	CCNGG	8 cut(s)	156, 246, 327, 369, 525, 1067, 1375, 1376
StyI	CCWWGG	2 cut(s)	207, 270
TaaI	ACNGT	2 cut(s)	599, 1737
TaiI	ACGT	2 cut(s)	280, 1120
TaqI	TCGA	4 cut(s)	628, 923, 955, 1636
TasI	AATT	8 cut(s)	237, 951, 1155, 1245, 1415, 1487, 1586, 1632
TatI	WGTACW	2 cut(s)	492, 1453
TauI	GCSGC	1 cut(s)	521
TfiI	GAWTC	2 cut(s)	727, 1372
TscAI	CASTG	4 cut(s)	15, 502, 784, 831
TseI	GCWGC	2 cut(s)	1619, 1679
TspDTI	ATGAA	7 cut(s)	719, 953, 1129, 1364, 1412, 1428, 1520
TspMI	CCCGGG	1 cut(s)	1376
TspRI	CASTG	4 cut(s)	15, 502, 784, 831
Tth111I	GACNNNGTC	1 cut(s)	254
Vha464I	CTTAAG	1 cut(s)	650
VpaK11BI	GGWCC	1 cut(s)	547
VspI	ATTAAT	1 cut(s)	785
XapI	RAATTY	4 cut(s)	237, 951, 1245, 1415
XcmI	CCANNNNNNNNNTGG	1 cut(s)	613
XmaI	CCCGGG	1 cut(s)	1376
XmiI	GTMKAC	1 cut(s)	1218
XspI	CTAG	3 cut(s)	195, 591, 1103
ZrmI	AGTACT	1 cut(s)	1455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.